# terms

id: PBO:0066057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 2","termid":"PBO:0066057"}


id: PBO:0109433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair protein","termid":"PBO:0109433"}


id: FYPO:0005445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the single-stranded telomeric 3' overhang is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17429064","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal telomere structure during vegetative growth","termid":"FYPO:0002155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere 3' overhang length during vegetative growth","synonyms":[{"name":"normal telomere 3' overhang length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005445"}


id: PBO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 3","termid":"PBO:0046455"}


id: MONDO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tyrosinemia type 3 is an inborn error of tyrosine metabolism characterized by mild hypertyrosinemia and increased urinary excretion of 4-hydroxyphenylpyruvate, 4-hydroxyphenyllactate and 4-hydroxyphenylacetate.","definition_xrefs":["Orphanet:69723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tyrosinemia type III","secondary_identifiers":["MEDGEN:78694","NANDO:1200790","MedDRA:10069461","NANDO:2200470","DOID:0050727","ICD9:270.2","SCTID:415764005","OMIM:276710","UMLS:C0268623","GARD:10332"],"synonyms":[{"name":"4-Hydroxyphenylpyruvate dioxygenase deficiency","type":"related"},{"name":"4-Hydroxyphenylpyruvic acid oxidase deficiency","type":"related"},{"name":"4-alpha hydroxyphenylpyruvate dioxygenase deficiency","type":"related"},{"name":"4-alpha hydroxyphenylpyruvic acid oxidase deficiency","type":"related"},{"name":"TYRSN3","type":"related"},{"name":"tyrosinemia due to 4-hydroxyphenylpyruvate dioxygenase deficiency","type":"exact"},{"name":"tyrosinemia due to 4-hydroxyphenylpyruvic acid oxidase deficiency","type":"exact"},{"name":"tyrosinemia due to HPD deficiency","type":"exact"},{"name":"tyrosinemia type 3","type":"related"},{"name":"tyrosinemia type III","type":"exact"},{"name":"tyrosinemia, type 3","type":"related"},{"name":"tyrosinemia, type III","type":"related"}],"termid":"MONDO:0010162","xrefs":{"Monarch":{"xref_id":"0010162"}}}


id: MONDO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A atherosclerosis that involves the renal artery.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic atherosclerosis","termid":"MONDO:0000980"},{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal artery atheroma","secondary_identifiers":["SCTID:45281005","ICD10CM:I70.1","DOID:14092","ICD9:440.1","UMLS:C0155734","MEDGEN:510062"],"synonyms":[{"name":"atherosclerosis of renal artery","type":"exact"},{"name":"renal artery atherosclerosis","type":"exact"},{"name":"renal atherosclerosis","type":"exact"}],"termid":"MONDO:0001876","xrefs":{"Monarch":{"xref_id":"0001876"}}}


id: MONDO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mesenchymal neoplasm of the nervous system or soft tissues. It is characterized by the presence of a sarcomatous component (most often rhabdomyosarcoma) and a ganglionic or a neuroectodermal component.","definition_xrefs":["NCIT:C4716"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system mesenchymal non-meningothelial tumor","termid":"MONDO:0003244"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ectomesenchymoma","secondary_identifiers":["ICDO:8921/3","DOID:4055","UMLS:C0431111","MEDGEN:98123"],"synonyms":[{"name":"ectomesenchymoma","type":"exact"},{"name":"malignant ectomesenchymoma","type":"exact"},{"name":"rhabdomyosarcoma with ganglionic differentiation","type":"exact"},{"name":"rhabdomyosarcoma with ganglionic differentiation (morphologic abnormality)","type":"exact"},{"name":"sarcoma with ganglionic or neuroectodermal differentiation","type":"exact"}],"termid":"MONDO:0002855","xrefs":{"Monarch":{"xref_id":"0002855"}}}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["GARD:18361","MEDGEN:863566","OMIM:616067","UMLS:C4015129","DOID:0111770"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: SO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_sequence","synonyms":[{"name":"mitochondrial sequence","type":"exact"}],"termid":"SO:0000737"}


id: PBO:0069803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1089, pseudogene","termid":"PBO:0069803"}


id: PATO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001086 efficiency value (obsolete PATO:0001086)","termid":"PATO:0001086"}


id: MONDO:0010357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MRX78 (obsolete MONDO:0010357)","secondary_identifiers":["OMIM:300551"],"termid":"MONDO:0010357","xrefs":{"Monarch":{"xref_id":"0010357"}}}


id: SO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a polyadenylated mRNA.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"},{"relation_name":"transcribed_to","term_name":"polyadenylated_mRNA","termid":"SO:0000871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_polyadenylated_mRNA","synonyms":[{"name":"gene with polyadenylated mRNA","type":"exact"}],"termid":"SO:0000451"}


id: GO:1905769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:BHF","GOC:nc","GOC:BHF_telomere","PMID:18812185"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of double-stranded telomeric DNA binding (obsolete GO:1905769)","synonyms":[{"name":"activation of double-stranded telomeric DNA binding","type":"narrow"},{"name":"up regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"up-regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"upregulation of double-stranded telomeric DNA binding","type":"exact"}],"termid":"GO:1905769"}


id: PBO:0038852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS19 antisense RNA 1","termid":"PBO:0038852"}


id: GO:0070049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 2 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-2 complex","synonyms":[{"name":"SNARE complex (Stx2, Snap25, Vamp8)","type":"narrow"},{"name":"Stx2-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070049"}


id: PBO:0075187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 4","termid":"PBO:0075187"}


id: FYPO:0006351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubules become disconnected from the spindle pole body.","definition_xrefs":["PomBase:mah","PMID:17579515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000120","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle microtubules detached from spindle pole body","synonyms":[{"name":"mitotic spindle microtubules detached from SPB","type":"exact"},{"name":"mitotic spindle microtubules detached from spindle pole body during vegetative growth","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during mitosis","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"spindle pole body detached from mitotic spindle microtubules","type":"exact"}],"termid":"FYPO:0006351"}


id: MONDO:0044315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis is a primary abnormality of skull growth involving premature fusion of the cranial sutures such that the growth velocity of the skull often cannot match that of the developing brain. This produces skull deformity and, in some cases, raises intracranial pressure, which must be treated promptly to avoid permanent neurodevelopmental disability (summary by {1:Fitzpatrick, 2013}).nnFor a discussion of genetic heterogeneity of craniosynostosis, see CRS1 (OMIM:123100).","definition_xrefs":["OMIM:617439"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"craniosynostosis","termid":"MONDO:0015469"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis 7","secondary_identifiers":["MEDGEN:1392447","UMLS:C4479496","DOID:0060912"],"synonyms":[{"name":"CRS7","type":"related"},{"name":"Crs7, digenic","type":"related"},{"name":"craniosynostosis 7","type":"exact"},{"name":"craniosynostosis 7, digenic","type":"related"},{"name":"craniosynostosis 7, susceptibility to","type":"exact"}],"termid":"MONDO:0044315","xrefs":{"Monarch":{"xref_id":"0044315"}}}


id: GO:0034412
data:
  {"annotated_genes":["SJAG_04771","SJAG_03587","SJAG_04666","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74763],"is_not":false,"summary":null,"term":"GO:0034412"},{"annotations":[96363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[94313,89378],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554","GO:0030437","GO:0007049","GO:0005975"],"is_obsolete":false,"name":"ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-glucan formation","type":"exact"},{"name":"ascospore wall beta-glucan synthesis","type":"exact"}],"termid":"GO:0034412","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: PBO:0052043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kalirin RhoGEF kinase","termid":"PBO:0052043"}


id: PBO:0055685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyltransferase 1","termid":"PBO:0055685"}


id: MOD:01966
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00720. Remap to MOD:00720.","definition_xrefs":["PubMed:21406390","PubMed:23911929","RESID:AA0581","PubMed:22116028","ChEBI:45764"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01966 L-methionine (R)-sulfoxide (obsolete MOD:01966)","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"}],"termid":"MOD:01966"}


id: GO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication.","definition_xrefs":["PMID:22579284","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"telomeric loop disassembly","synonyms":[{"name":"T loop disassembly","type":"exact"},{"name":"t-loop disassembly","type":"exact"}],"termid":"GO:0090657"}


id: MONDO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the aortic valve.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve disorder","termid":"MONDO:0002869"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"cardiac ventricle disorder","termid":"MONDO:0045001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve disorder","secondary_identifiers":["DOID:62","NCIT:C78650","EFO:0009531","UMLS:C1260873","ICD9:395","ICD9:424.1","MEDGEN:226776"],"synonyms":[{"name":"aortic valve disease","type":"exact"},{"name":"aortic valve disease or disorder","type":"exact"},{"name":"aortic valve disorder","type":"exact"},{"name":"disease of aortic valve","type":"exact"},{"name":"disease or disorder of aortic valve","type":"exact"},{"name":"disorder of aortic valve","type":"exact"}],"termid":"MONDO:0003803","xrefs":{"Monarch":{"xref_id":"0003803"}}}


id: PBO:0045744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 1","termid":"PBO:0045744"}


id: GO:0021512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the spinal cord.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"spinal cord patterning","termid":"GO:0021511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord anterior/posterior patterning","synonyms":[{"name":"spinal cord anterior-posterior patterning","type":"exact"},{"name":"spinal cord rostrocaudal patterning","type":"related"}],"termid":"GO:0021512"}


id: GO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticotropin-releasing hormone, a polypeptide hormone involved in the stress response. It is released by the hypothalamus and stimulates the release of corticotropin by the anterior pituitary gland.","definition_xrefs":["PMID:7556876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"corticotropin-releasing hormone binding","secondary_identifiers":["GO:0017047"],"synonyms":[{"name":"CRF binding","type":"exact"},{"name":"CRH binding","type":"exact"},{"name":"corticoliberin binding","type":"exact"},{"name":"corticotropin-releasing factor binding","type":"exact"}],"termid":"GO:0051424"}


id: PBO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd90 protein","termid":"PBO:0003833"}


id: PBO:0041491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 42","termid":"PBO:0041491"}


id: GO:0180052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex comprising the mRNA bound fully assembled 55S mitoribosome with the tRNA-met positioned in the P-site of the mitochondrial small subunit to recognize the mRNA start codon.","definition_xrefs":["GOC:vw","PMID:32522994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation complex","termid":"GO:0070992"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial translation initiation complex","synonyms":[{"name":"mitochondrial initiation complex","type":"related"},{"name":"mtIC","type":"exact"}],"termid":"GO:0180052"}


id: GO:0016233
data:
  {"annotated_genes":["SJAG_01864","SJAG_02194","SJAG_03685","SJAG_01378","SJAG_04245","SJAG_02362","SJAG_01777","SJAG_03092"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64239,78830,93732,101653,112365,117966],"is_not":false,"summary":null,"term":"GO:0016233"},{"annotations":[91646,81650],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031848"}]},"cv_name":"biological_process","definition":"A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.","definition_xrefs":["PMID:11349150","GOC:rn","PMID:11352055","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomere capping","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"telomere end protection","type":"exact"}],"termid":"GO:0016233","terms_by_termid":{"GO:0016233":null,"GO:0031848":null}}


id: GO:0097564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["PMID:5961344","PMID:16607022","GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right lateral basal body pair","termid":"GO:0097564"}


id: GO:0070268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of programmed cell death that occurs in the epidermis, morphologically and biochemically distinct from apoptosis. It leads to the formation of corneocytes, i.e. dead keratinocytes containing an amalgam of specific proteins (e.g., keratin, loricrin, SPR and involucrin) and lipids (e.g., fatty acids and ceramides), which are necessary for the function of the cornified skin layer (mechanical resistance, elasticity, water repellence and structural stability).","definition_xrefs":["GOC:krc","PMID:18846107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"keratinization","termid":"GO:0031424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cornification","secondary_identifiers":["Reactome:R-HSA-6809371"],"termid":"GO:0070268"}


id: PBO:0080695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 2B","termid":"PBO:0080695"}


id: GO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Disruption of theca cell layer releasing follicular fluid and/or the oocyte.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovulation from ovarian follicle","termid":"GO:0001542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle rupture","termid":"GO:0001543"}


id: MONDO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiomyolipoma arising from the liver.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiomyolipoma","termid":"MONDO:0002603"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic angiomyolipoma","secondary_identifiers":["UMLS:C1333962","MEDGEN:272705","DOID:3317","NCIT:C27485"],"synonyms":[{"name":"liver PEComa","type":"exact"},{"name":"liver angiomyolipoma","type":"exact"}],"termid":"MONDO:0002605","xrefs":{"Monarch":{"xref_id":"0002605"}}}


id: PBO:0082133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin cortical patch component; interacts with the actin depolymerizing factor cofilin; inhibits elongation of aged ADP-actin filaments decorated with cofilin to maintain a high level of assembly-competent actin species; required to restrict cofilin localization to cortical patches; putative regulator of cytokinesis; contains WD repeats; mutations in human homolog WDR1 are associated with cardiac hypertrophy","termid":"PBO:0082133"}


id: PBO:0088957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0088957"}


id: PBO:0006192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_presence_of","termid":"PBO:0006192"}


id: MONDO:0003677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"lateral myocardial infarction","secondary_identifiers":["DOID:5853","MEDGEN:83306","UMLS:C0340312"],"termid":"MONDO:0003677","xrefs":{"Monarch":{"xref_id":"0003677"}}}


id: GO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BMP receptor.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"BMP receptor binding","synonyms":[{"name":"bone morphogenetic protein receptor binding","type":"exact"}],"termid":"GO:0070700"}


id: GO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of macrophage chemotaxis","termid":"GO:0010758"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"macrophage chemotaxis","termid":"GO:0048246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage chemotaxis","termid":"GO:0010760"}


id: PBO:0087642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p); complex is localized to DNA replication origins and implicated in assembly of the DNA replication machinery","termid":"PBO:0087642"}


id: PBO:0084614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloendopeptidase of the mitochondrial inner membrane; important for adaptive responses to various homeostatic insults, preservation of normal mitochondrial function under damage-eliciting conditions, and stability of respiratory supercomplexes; involved in turnover of membrane-embedded proteins; mediates degradation of Cox1p in coa2 mutant cells; zebrafish ortholog has a role in organ development and mouse ortholog is also required for respiratory supercomplex stability","termid":"PBO:0084614"}


id: PBO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pot1 associated protein Poz1","termid":"PBO:0002349"}


id: PBO:0044465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily X member 1","termid":"PBO:0044465"}


id: PBO:0089077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L6","termid":"PBO:0089077"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: MONDO:0024262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal aspiration syndrome","termid":"MONDO:0024263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"massive neonatal aspiration syndrome","secondary_identifiers":["MEDGEN:542567","UMLS:C0270152","SCTID:10269001"],"termid":"MONDO:0024262","xrefs":{"Monarch":{"xref_id":"0024262"}}}


id: PBO:0053869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1144","termid":"PBO:0053869"}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: PBO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein (predicted)","termid":"PBO:0000884"}


id: GO:0018571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxy-p-cumate + O2 = 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate.","definition_xrefs":["RHEA:42568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxy-p-cumate dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-666","UM-BBD_reactionID:r0397"],"synonyms":[{"name":"2,3-dihydroxy-p-cumate 3,4-dioxygenase","type":"exact"},{"name":"2,3-dihydroxy-p-cumate-3,4-dioxygenase","type":"exact"}],"termid":"GO:0018571"}


id: PBO:0046513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH6 antisense RNA 1","termid":"PBO:0046513"}


id: GO:0010125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycothiol, which consists of N-acetyl-L-cysteine linked to a pseudodisaccharide, D-glucosamine and myo-inositol. Mycothiol is produced in actinomycetes like mycobacteria and serves similar functions to glutathione.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycothiol metabolic process","termid":"GO:0010126"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"mycothiol biosynthetic process","secondary_identifiers":["MetaCyc:PWY1G-0"],"synonyms":[{"name":"mycothiol anabolism","type":"exact"},{"name":"mycothiol biosynthesis","type":"exact"},{"name":"mycothiol formation","type":"exact"},{"name":"mycothiol synthesis","type":"exact"}],"termid":"GO:0010125"}


id: MONDO:0011760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scheie syndrome is the mildest form of mucopolysaccharidosis type 1 (MPS1), a rare lysosomal storage disease, characterized by skeletal deformities and a delay in motor development.","definition_xrefs":["Orphanet:93474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 1","termid":"MONDO:0001586"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792","MONDO:0005328"],"is_obsolete":false,"name":"Scheie syndrome","secondary_identifiers":["UMLS:C0026708","NCIT:C61265","OMIM:607016","NANDO:1200095","MEDGEN:6453","NANDO:2201169","GARD:12561","SCTID:73123008","DOID:0060222"],"synonyms":[{"name":"MPS I S","type":"exact"},{"name":"MPS V","type":"related"},{"name":"MPS V, formerly","type":"related"},{"name":"MPS1-S","type":"related"},{"name":"MPS1S","type":"exact"},{"name":"MPS5, formerly","type":"related"},{"name":"MPSIS","type":"exact"},{"name":"Scheie syndrome","type":"exact"},{"name":"mucopolysaccharidosis Is","type":"related"},{"name":"mucopolysaccharidosis type 1S","type":"exact"},{"name":"mucopolysaccharidosis type IS","type":"exact"},{"name":"mucopolysaccharidosis type V","type":"exact"},{"name":"mucopolysaccharidosis type V, formerly","type":"related"}],"termid":"MONDO:0011760","xrefs":{"Monarch":{"xref_id":"0011760"}}}


id: GO:0060225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"is_a","term_name":"regulation of retinal rod cell fate commitment","termid":"GO:0060224"},{"relation_name":"positively_regulates","term_name":"retinal rod cell fate commitment","termid":"GO:0060223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal rod cell fate commitment","termid":"GO:0060225"}


id: PBO:0085209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidoreductase of the mitochondrial inner membrane; involved in cytoplasmic and mitochondrial iron homeostasis and required for activity of Fe-S cluster-containing enzymes; one of the few mitochondrial proteins essential for viability","termid":"PBO:0085209"}


id: PBO:0090626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase","termid":"PBO:0090626"}


id: PBO:0085405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; truncation and overexpression suppresses lethality of G-alpha protein deficiency","termid":"PBO:0085405"}


id: GO:1902510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["PMID:15723341","GOC:TermGenie","GOC:hjd","PMID:15572351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of apoptotic DNA fragmentation","synonyms":[{"name":"regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"regulation of DNA fragmentation","type":"broad"},{"name":"regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"regulation of chromatinolysis","type":"broad"},{"name":"regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902510"}


id: GO:0098733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of or has some part in a hemidesmosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"hemidesmosome associated protein complex","termid":"GO:0098733"}


id: PBO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 4","termid":"PBO:0061431"}


id: PBO:0060950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, interleukin 3 regulated","termid":"PBO:0060950"}


id: SO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An X element combinatorial repeat is a repeat region located between the X element and the telomere or adjacent Y' element.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_element_combinatorial_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:x_element_combinatorial_repeat","type":"exact"},{"name":"X element combinatorial repeat","type":"exact"}],"termid":"SO:0001484"}


id: MONDO:0858958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic astrocytoma that is characterized by high-grade piloid and/or glioblastoma-like histological features. It may occur anywhere in the central nervous system but most often arises in the posterior fossa.","definition_xrefs":["DOID:0081304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic astrocytoma","termid":"MONDO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"high-grade astrocytoma with piloid features","secondary_identifiers":["UMLS:C5670122","NCIT:C185879","MEDGEN:1812304"],"termid":"MONDO:0858958","xrefs":{"Monarch":{"xref_id":"0858958"}}}


id: PBO:0043167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated kinase 1","termid":"PBO:0043167"}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: PBO:0087461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric NC2 transcription regulator complex; complex binds to TBP and can repress transcription by preventing preinitiation complex assembly or stimulate activated transcription; homologous to human NC2beta; complex also includes Bur6p","termid":"PBO:0087461"}


id: MONDO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serous or mucinous cystadenoma of childhood is a benign epithelial ovarian tumor characterized by a usually unilateral, cystic, unilocular or multilocular lesion with a thin wall or septa and no intracystic solid portion on imaging. It often presents with abdominal pain or an asymptomatic abdominal mass and can be associated with ovarian torsion or malignant transformation.","definition_xrefs":["Orphanet:206470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous or mucinous cystadenoma of childhood","secondary_identifiers":["MEDGEN:1803886","UMLS:C5679785","GARD:20346"],"synonyms":[{"name":"mucinous cystadenoma of ovary in childhood","type":"exact"},{"name":"serous cystadenoma of ovary in childhood","type":"exact"}],"termid":"MONDO:0016092","xrefs":{"Monarch":{"xref_id":"0016092"}}}


id: GO:0071477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic salinity response","termid":"GO:0042539"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hypotonic response","termid":"GO:0071476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic salinity response","synonyms":[{"name":"cellular response to hypotonic salt stress","type":"exact"}],"termid":"GO:0071477"}


id: PBO:0047273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 and FANCI associated nuclease 1","termid":"PBO:0047273"}


id: MONDO:0015360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant hereditary axonal motor and sensory neuropathy (obsolete MONDO:0015360)","secondary_identifiers":["Orphanet:140456"],"termid":"MONDO:0015360","xrefs":{"Monarch":{"xref_id":"0015360"}}}


id: GO:1901082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"positively_regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of smooth muscle","synonyms":[{"name":"activation of relaxation of smooth muscle","type":"narrow"},{"name":"activation of smooth muscle relaxation","type":"exact"},{"name":"positive regulation of smooth muscle relaxation","type":"exact"},{"name":"up regulation of relaxation of smooth muscle","type":"exact"},{"name":"up regulation of smooth muscle relaxation","type":"exact"},{"name":"up-regulation of relaxation of smooth muscle","type":"exact"},{"name":"up-regulation of smooth muscle relaxation","type":"exact"},{"name":"upregulation of relaxation of smooth muscle","type":"exact"},{"name":"upregulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901082"}


id: PBO:0028059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcriptional_response_to_pheromone","termid":"PBO:0028059"}


id: GO:0060893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an limb granular cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell fate specification","termid":"GO:0009957"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"limb epidermis stratification","termid":"GO:0060888"},{"relation_name":"part_of","term_name":"limb granular cell differentiation","termid":"GO:0060891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb granular cell fate specification","termid":"GO:0060893"}


id: PBO:0053609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 642","termid":"PBO:0053609"}


id: GO:0018565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxydibenzothiophene + O2 = cis-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate.","definition_xrefs":["UM-BBD_reactionID:r0162"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroxydibenzothiophene dioxygenase activity (obsolete GO:0018565)","termid":"GO:0018565"}


id: PBO:0049334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 2","termid":"PBO:0049334"}


id: MONDO:0008664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant neovascular inflammatory vitreoretinopathy (obsolete MONDO:0008664)","termid":"MONDO:0008664","xrefs":{"Monarch":{"xref_id":"0008664"}}}


id: GO:0101013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel whose activity is modulated in response to mechanical stress. Response to mechanical stress and voltage gating together is different than the sum of individual responses. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:21041530","PMID:26838316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity","termid":"GO:0005248"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive voltage-gated sodium channel activity","synonyms":[{"name":"mechanically-modulated voltage-gated sodium channel activity","type":"exact"}],"termid":"GO:0101013"}


id: MONDO:0014623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the SASS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 14, primary, autosomal recessive","secondary_identifiers":["MEDGEN:906798","OMIM:616402","GARD:16105","UMLS:C4225338","DOID:0070279"],"synonyms":[{"name":"MCPH14","type":"related"},{"name":"SASS6 autosomal recessive primary microcephaly","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in SASS6","type":"exact"},{"name":"microcephaly 14, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014623","xrefs":{"Monarch":{"xref_id":"0014623"}}}


id: MONDO:0016751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare malignant tumor with morphologic features similar to those of benign perineurioma of soft tissue along with hypercellularity, nuclear atypia, hyperchromasia, and a high mitotic rate.","definition_xrefs":["NCIT:C66845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perineurioma","termid":"MONDO:0019404"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant perineurioma","secondary_identifiers":["UMLS:C1266188","SCTID:761958009","GARD:20741","ICDO:9571/3","MEDGEN:220432","icd11.foundation:986576766","Orphanet:252128"],"synonyms":[{"name":"malignant peripheral nerve sheath tumor with perineurial differentiation","type":"exact"},{"name":"malignant peripheral nerve sheath tumour with perineurial differentiation","type":"exact"},{"name":"perineurial malignant peripheral nerve sheath tumor","type":"exact"},{"name":"perineurial malignant peripheral nerve sheath tumour","type":"exact"},{"name":"perineurioma, malignant","type":"exact"}],"termid":"MONDO:0016751","xrefs":{"Monarch":{"xref_id":"0016751"}}}


id: PBO:0073787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 7","termid":"PBO:0073787"}


id: PBO:0045197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B8","termid":"PBO:0045197"}


id: PBO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding subunit 3","termid":"PBO:0060610"}


id: PATO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branchiness quality inhering in a bearer by virtue of the bearer's having branches.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiness","termid":"PATO:0002009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched","synonyms":[{"name":"ramified","type":"exact"},{"name":"ramiform","type":"exact"}],"termid":"PATO:0000402"}


id: PBO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase Oar2","termid":"PBO:0090012"}


id: GO:0003995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2,3-saturated acyl-CoA + H+ oxidized [electron-transfer flavoprotein] = a (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["RHEA:44704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-109341","Reactome:R-HSA-70800","Reactome:R-HSA-77319","Reactome:R-HSA-77263","Reactome:R-HSA-77299","Reactome:R-HSA-77327","Reactome:R-HSA-5695989","Reactome:R-HSA-5695980","Reactome:R-HSA-77338","MetaCyc:ACYLCOADEHYDROG-RXN","Reactome:R-HSA-77345","GO:0019109","Reactome:R-HSA-77274","Reactome:R-HSA-70859"],"synonyms":[{"name":"acyl CoA dehydrogenase activity","type":"exact"},{"name":"acyl coenzyme A dehydrogenase activity","type":"exact"},{"name":"acyl-CoA reductase activity","type":"exact"},{"name":"fatty acyl coenzyme A dehydrogenase activity","type":"related"},{"name":"fatty-acyl-CoA dehydrogenase activity","type":"related"},{"name":"general acyl CoA dehydrogenase activity","type":"related"}],"termid":"GO:0003995"}


id: PR:O14107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni1 gene.","definition_xrefs":["UniProtKB:O14107","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein dni1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.07","synonyms":[{"name":"Spom972h-dni1","type":"exact"},{"name":"delayed minus-nitrogen induction protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14107"}


id: GO:0051084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' protein folding","termid":"GO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0006457","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"'de novo' post-translational protein folding","secondary_identifiers":["Reactome:R-HSA-391251"],"synonyms":[{"name":"'de novo' posttranslational protein folding","type":"exact"}],"termid":"GO:0051084"}


id: GO:0016896
data:
  {"annotated_genes":["SJAG_00401","SJAG_04519","SJAG_02993","SJAG_04818","SJAG_02275","SJAG_04006","SJAG_03132","SJAG_01836","SJAG_03876","SJAG_04587","SJAG_04153","SJAG_03745","SJAG_01822","SJAG_00081","SJAG_04407","SJAG_04084","SJAG_01798","SJAG_06586","SJAG_00966","SJAG_04369","SJAG_00841","SJAG_04824","SJAG_03276","SJAG_02540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72382,81246,100871,106364,104034,67852,105619,120358,107234,76359,81502,71686,91860,63755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[71747,75264,79687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[116450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[109760,76011,79241,80585,118631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[70119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0004527","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"RNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.13.-","Reactome:R-HSA-429860"],"synonyms":[{"name":"exoribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exoribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016896","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: FYPO_EXT:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"intermediate fraction of cells (penetrance) or moderate phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium","termid":"FYPO_EXT:0000002"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: PR:Q9P7H3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prohibitin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23222:SF0","OMA:SCHPO01972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.06c","secondary_identifiers":["UniProtKB:Q9P7H3"],"synonyms":[{"name":"Spom972h-PHB","type":"exact"}],"termid":"PR:Q9P7H3"}


id: GO:0003063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine released from vagus nerve endings binds to muscarinic receptors on the pacemaker cells and decreases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"},{"relation_name":"is_a","term_name":"negative regulation of heart rate","termid":"GO:0010459"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate by acetylcholine","synonyms":[{"name":"negative regulation of heart contraction rate by acetylcholine","type":"related"}],"termid":"GO:0003063"}


id: GO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicyl alcohol + UDP-D-glucose = H+ + salicin + UDP.","definition_xrefs":["EC:2.4.1.172","RHEA:11512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"salicyl-alcohol beta-D-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03558","MetaCyc:SALICYL-ALCOHOL-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:salicyl-alcohol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:salicyl alcohol phenyl-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:salicyl-alcohol beta-D-glucosyltransferase activity","type":"related"},{"name":"salicyl-alcohol b-D-glucosyltransferase activity","type":"exact"},{"name":"salicyl-alcohol glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-salicyl alcohol 2-glucosyltransferase activity","type":"related"}],"termid":"GO:0050274"}


id: PBO:0041222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 2","termid":"PBO:0041222"}


id: GO:0046807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and maintenance of the viral scaffold around which the viral capsid is constructed.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral scaffold assembly and maintenance","termid":"GO:0046807"}


id: PBO:0028211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutively_activated_MAPK_cascade_involved_in_cell_wall_organization_or_biogenesis","termid":"PBO:0028211"}


id: GO:0038197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that binds a type I interferon and transmits the signal across the membrane into the cell. Consists of an alpha subunit (IFNAR1) and a beta subunit (IFNAR2).","definition_xrefs":["PMID:17502368","GOC:cjm","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"type I interferon receptor complex","synonyms":[{"name":"interferon-alpha/beta receptor complex","type":"narrow"}],"termid":"GO:0038197"}


id: PBO:0067570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 725, pseudogene","termid":"PBO:0067570"}


id: PBO:0047311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas activated serine/threonine kinase","termid":"PBO:0047311"}


id: PBO:0080515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 2","termid":"PBO:0080515"}


id: MONDO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome","termid":"MONDO:0005377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome ocular anomalies","secondary_identifiers":["MESH:C536403","MEDGEN:419736","UMLS:C2931188"],"synonyms":[{"name":"Glastre Cochat Bouvier syndrome","type":"related"},{"name":"familial infantile nephrotic syndrome with ocular abnormalities","type":"related"}],"termid":"MONDO:0043156","xrefs":{"Monarch":{"xref_id":"0043156"}}}


id: PBO:0069095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 342, pseudogene","termid":"PBO:0069095"}


id: MONDO:0014188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0014188 (obsolete MONDO:0014188)","termid":"MONDO:0014188","xrefs":{"Monarch":{"xref_id":"0014188"}}}


id: FYPO:0005122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from middle meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PMID:17927811","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of middle meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of middle meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of middle meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of middle meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005122"}


id: PBO:0065188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROX1 antisense RNA 1","termid":"PBO:0065188"}


id: GO:0030001
data:
  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id: FYPO:0004966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of horsetail movement is longer than normal. Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["GO:0030989","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal horsetail movement","termid":"FYPO:0000197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of horsetail movement","synonyms":[{"name":"increased duration of dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"increased duration of horsetail nuclear movement","type":"exact"},{"name":"prolonged horsetail movement","type":"exact"}],"termid":"FYPO:0004966"}


id: GO:0009668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of either of the lipid bilayers surrounding a plastid.","definition_xrefs":["GOC:jl","GOC:dph","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plastid membrane organization","synonyms":[{"name":"plastid membrane organisation","type":"exact"},{"name":"plastid membrane organization and biogenesis","type":"related"}],"termid":"GO:0009668"}


id: PBO:0058480
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5587","termid":"PBO:0058480"}


id: PBO:0050118
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 28","termid":"PBO:0050118"}


id: GO:0071686
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The elongated nucleus which forms during the rapid oscillatory movement at meiotic prophase; characterized in Schizosaccharomyces pombe.","definition_xrefs":["GOC:vw","PMID:15030757"],"gene_count":0,"genotype_count":0,"name":"obsolete horsetail nucleus (obsolete GO:0071686)","termid":"GO:0071686"}


id: GO:0106040
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of GABA-A receptor activity","termid":"GO:0106040"}


id: PBO:0050152
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 8","termid":"PBO:0050152"}


id: GO:1900248
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translation","termid":"GO:2000766"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational elongation","synonyms":[{"name":"down regulation of cytoplasmic translational elongation","type":"exact"},{"name":"down-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"downregulation of cytoplasmic translational elongation","type":"exact"},{"name":"inhibition of cytoplasmic translational elongation","type":"narrow"}],"termid":"GO:1900248"}


id: MONDO:1012424
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"llama syndrome chondrodysplasia, sheep","secondary_identifiers":["OMIA:001616-9940"],"termid":"MONDO:1012424","xrefs":{"Monarch":{"xref_id":"1012424"}}}


id: GO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sequestering of zinc ion (obsolete GO:0061090)","termid":"GO:0061090"}


id: MOD:01793
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine sulfoxide.","definition_xrefs":["PubMed:18688235","PubMed:18306178","PubMed:11212008","PubMed:17689096"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine sulfoxide","synonyms":[{"name":"CamCO","type":"exact"},{"name":"S-carbamoylmethyl-L-cysteine sulfoxide","type":"exact"}],"termid":"MOD:01793"}


id: MONDO:1011871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive neuronopathy, non-human animal","secondary_identifiers":["OMIA:001282"],"termid":"MONDO:1011871","xrefs":{"Monarch":{"xref_id":"1011871"}}}


id: PBO:0108684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP","termid":"PBO:0108684"}


id: GO:0097266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + H+ + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP+.","definition_xrefs":["PMID:20660314","EC:1.14.13.149","GOC:bf","GOC:gk","PMID:21247899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phenylacetyl-CoA 1,2-epoxidase activity","secondary_identifiers":["KEGG_REACTION:R09838","RHEA:32171"],"synonyms":[{"name":"phenylacetyl-CoA epoxidase activity","type":"exact"},{"name":"phenylacetyl-CoA monooxygenase activity","type":"related"},{"name":"ring 1,2-phenylacetyl-CoA epoxidase activity","type":"related"}],"termid":"GO:0097266"}


id: PBO:0089911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 ATPase subunit","termid":"PBO:0089911"}


id: GO:0019773
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  {"annotated_genes":["SJAG_00808","SJAG_00778","SJAG_04306","SJAG_02502","SJAG_04357","SJAG_05316","SJAG_02562"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71556,73675,74274,74811,76931,77338,80186],"is_not":false,"summary":null,"term":"GO:0019773"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:jl","PMID:10854779","GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00778":null,"SJAG_00808":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome core complex, alpha-subunit complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0019773","terms_by_termid":{"GO:0019773":null}}


id: GO:0097275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of ammonium within a cell.","definition_xrefs":["GOC:yaf","PMID:12695560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"ammonium homeostasis","termid":"GO:0097272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular ammonium homeostasis","synonyms":[{"name":"cellular ammonia homeostasis","type":"exact"},{"name":"cellular ammonium homeostasis","type":"exact"}],"termid":"GO:0097275"}


id: GO:0044293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small dendrites that makes up a brush structure found as the terminal specialization of a dendrite of a unipolar brush cell (UBC).","definition_xrefs":["GOC:jl","NIF_Subcellular:sao295057932","PMID:8300904","NIF_Subcellular:sao28175134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendriole","termid":"GO:0044293"}


id: MONDO:0042963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by an abnormal spleen position due to loss, weakness, or malformation of one or more of the ligaments that hold the spleen in its normal position in the left upper abdomen. It may present as a birth defect or follow injuries or pregnancy. Signs and symptoms include abdominal discomfort and splenomegaly.","definition_xrefs":["NCIT:C85224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"wandering spleen","secondary_identifiers":["SCTID:191384005","GARD:328","MESH:D050805","MEDGEN:75782","NORD:1836","UMLS:C0272414"],"synonyms":[{"name":"Ptoses, splenic","type":"related"},{"name":"Splenoptoses","type":"related"},{"name":"displaced spleen","type":"related"},{"name":"displaced spleens","type":"related"},{"name":"drifting spleen","type":"related"},{"name":"drifting spleens","type":"related"},{"name":"floating spleen","type":"related"},{"name":"floating spleens","type":"related"},{"name":"ptosis, splenic","type":"related"},{"name":"spleen, displaced","type":"related"},{"name":"spleen, drifting","type":"related"},{"name":"spleen, floating","type":"related"},{"name":"spleen, wandering","type":"related"},{"name":"spleens, displaced","type":"related"},{"name":"spleens, drifting","type":"related"},{"name":"spleens, floating","type":"related"},{"name":"spleens, wandering","type":"related"},{"name":"splenic Ptoses","type":"related"},{"name":"splenic ptosis","type":"related"},{"name":"splenoptosis","type":"related"},{"name":"wandering spleen","type":"exact"},{"name":"wandering spleens","type":"related"}],"termid":"MONDO:0042963","xrefs":{"Monarch":{"xref_id":"0042963"}}}


id: GO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil degranulation","synonyms":[{"name":"down regulation of eosinophil degranulation","type":"exact"},{"name":"down-regulation of eosinophil degranulation","type":"exact"},{"name":"downregulation of eosinophil degranulation","type":"exact"},{"name":"inhibition of eosinophil degranulation","type":"narrow"},{"name":"negative regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043310"}


id: MONDO:1011714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocatalasia, non-human animal","secondary_identifiers":["OMIA:001138"],"termid":"MONDO:1011714","xrefs":{"Monarch":{"xref_id":"1011714"}}}


id: MONDO:1012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, non-human animal","termid":"MONDO:1011688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, cattle","secondary_identifiers":["OMIA:000313-9913"],"termid":"MONDO:1012067","xrefs":{"Monarch":{"xref_id":"1012067"}}}


id: PBO:0048110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 2","termid":"PBO:0048110"}


id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: GO:0070331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell-surface protein CD20 and the Src family tyrosine kinases Lck and Fyn.","definition_xrefs":["PMID:7545683","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CD20-Lck-Fyn complex","termid":"GO:0070331"}


id: PBO:0089497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme A diphosphatase","termid":"PBO:0089497"}


id: FYPO:0005847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methyltransferase activity","termid":"FYPO:0004784"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0000641"],"is_obsolete":false,"name":"decreased histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"decreased H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"reduced histone methyltransferase activity (H3-K9 specific) activity","type":"exact"}],"termid":"FYPO:0005847"}


id: PBO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1A","termid":"PBO:0048375"}


id: PBO:0040138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 1","termid":"PBO:0040138"}


id: PBO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex phosphatidylinositol pseudokinase Tra1","termid":"PBO:0003810"}


id: PBO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_serial_homology_relationship_with","termid":"PBO:0034082"}


id: FYECO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TOP-53 (a drug that targets topoisomerase II) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ TOP-53","termid":"FYECO:0000313"}


id: GO:0048027
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102399],"is_not":false,"summary":null,"term":"GO:0048027"}]},"cv_name":"molecular_function","definition":"Binding to an mRNA molecule at its 5' untranslated region.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"mRNA 5'-UTR binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA 5' UTR binding","type":"exact"}],"termid":"GO:0048027","terms_by_termid":{"GO:0048027":null}}


id: PBO:0074004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 5","termid":"PBO:0074004"}


id: PBO:0087675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the membrane-associated retromer complex; essential for endosome-to-Golgi retrograde protein transport; peripheral membrane protein that assembles onto the membrane with Vps5p to promote vesicle formation; required for recruiting the retromer complex to the endosome membranes","termid":"PBO:0087675"}


id: GO:0048775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: MONDO:0054842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease in which the cause of the disease is a mutation in the DNAJB11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 6 with or without polycystic liver disease","secondary_identifiers":["MEDGEN:1648469","DOID:0060951","UMLS:C4748044","OMIM:618061"],"synonyms":[{"name":"DNAJB11 polycystic kidney disease","type":"exact"},{"name":"PKD6","type":"related"},{"name":"polycystic kidney disease 6 with or without polycystic liver disease","type":"exact"},{"name":"polycystic kidney disease caused by mutation in DNAJB11","type":"exact"}],"termid":"MONDO:0054842","xrefs":{"Monarch":{"xref_id":"0054842"}}}


id: MONDO:0007493
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87044],"is_not":false,"summary":null,"term":"MONDO:0007493"}]},"cv_name":"mondo","definition":"DYT4 type primary dystonia is characterized by predominantly laryngeal dystonia (manifesting as whispering dysphonia) and cervical dystonia (manifesting as torticollis).","definition_xrefs":["Orphanet:98805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090041","GARD:10138","NANDO:1200515","MEDGEN:342124","SCTID:719276005","OMIM:128101","UMLS:C1851943"],"synonyms":[{"name":"DYT4","type":"exact"},{"name":"autosomal dominant torsion dystonia-4","type":"related"},{"name":"dystonia 4, torsion, autosomal dominant","type":"related"},{"name":"dystonia musculorum deformans 4","type":"related"},{"name":"hereditary whispering dysphonia","type":"exact"},{"name":"primary dystonia, DYT4 type","type":"related"},{"name":"torsion dystonia type 4","type":"exact"},{"name":"whispering dysphonia","type":"exact"},{"name":"whispering dysphonia, hereditary","type":"related"}],"termid":"MONDO:0007493","terms_by_termid":{"MONDO:0007493":null},"xrefs":{"Monarch":{"xref_id":"0007493"}}}


id: MONDO:1010120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden death in children < 19 years of age that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:28679642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexpected death in pediatrics","synonyms":[{"name":"SUDP","type":"exact"}],"termid":"MONDO:1010120","xrefs":{"Monarch":{"xref_id":"1010120"}}}


id: PR:Q1MTM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1327.01c gene.","definition_xrefs":["UniProtKB:Q1MTM9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1327.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1327.01c","synonyms":[{"name":"Spom972h-SPAC1327.01c","type":"exact"}],"termid":"PR:Q1MTM9"}


id: GO:1900941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900941"}


id: PBO:0057358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ab","termid":"PBO:0057358"}


id: PBO:0075584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 8 (putative)","termid":"PBO:0075584"}


id: MONDO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood mature teratoma of the ovary","secondary_identifiers":["UMLS:C1332991","MEDGEN:232354","DOID:6229","NCIT:C6548"],"synonyms":[{"name":"childhood mature ovarian teratoma","type":"exact"},{"name":"childhood mature teratoma of ovary","type":"exact"},{"name":"childhood ovarian mature teratoma","type":"exact"},{"name":"mature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric mature ovarian teratoma","type":"exact"},{"name":"paediatric mature teratoma of ovary","type":"exact"},{"name":"paediatric mature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian mature teratoma","type":"exact"},{"name":"pediatric mature ovarian teratoma","type":"exact"},{"name":"pediatric mature teratoma of ovary","type":"exact"},{"name":"pediatric mature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian mature teratoma","type":"exact"}],"termid":"MONDO:0003818","xrefs":{"Monarch":{"xref_id":"0003818"}}}


id: MONDO:0013880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital hereditary facial paralysis-variable hearing loss syndrome in which the cause of the disease is a mutation in the HOXB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital hereditary facial paralysis-variable hearing loss syndrome","termid":"MONDO:0017627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial paresis, hereditary congenital, 3","secondary_identifiers":["MEDGEN:766539","UMLS:C3553625","OMIM:614744","GARD:18437"],"synonyms":[{"name":"HCFP3","type":"related"},{"name":"HOXB1 congenital hereditary facial paralysis-variable hearing loss syndrome","type":"exact"},{"name":"congenital hereditary facial paralysis-variable hearing loss syndrome caused by mutation in HOXB1","type":"exact"},{"name":"facial paresis, hereditary congenital, 3","type":"exact"},{"name":"facial paresis, hereditary congenital, type 3","type":"exact"}],"termid":"MONDO:0013880","xrefs":{"Monarch":{"xref_id":"0013880"}}}


id: GO:0071257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to electrical stimulus","synonyms":[{"name":"cellular response to electricity","type":"related"}],"termid":"GO:0071257"}


id: PBO:0051397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 5 (non-functional)","termid":"PBO:0051397"}


id: MONDO:0016396
data:
  {"annotated_genes":["SJAG_04321","SJAG_04084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 1 (PCH1), also known as Norman's disease, is a clinically and genetically heterogeneous group of autosomal recessive disorders with a prenatal onset characterized by diffuse muscular atrophy secondary to pontocerebellar hypoplasia and spinal cord anterior horn cell degeneration resulting in early death.","definition_xrefs":["Orphanet:2254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"bulbospinal muscular atrophy","termid":"MONDO:0016113"},{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"},{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04084":null,"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0020022","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10704","MEDGEN:1780208","icd11.foundation:1227773923","SCTID:718610008","MESH:C548069","UMLS:C5442006","DOID:0112322"],"synonyms":[{"name":"MRT32","type":"exact"},{"name":"Norman disease","type":"exact"},{"name":"PCH1","type":"exact"},{"name":"mental retardation, autosomal recessive 32","type":"related"}],"termid":"MONDO:0016396","terms_by_termid":{"MONDO:0013853":null,"MONDO:0014485":null},"xrefs":{"Monarch":{"xref_id":"0016396"}}}


id: GO:1903068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["GOC:TermGenie","PMID:24554432","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell tip","synonyms":[{"name":"activation of protein localisation to cell tip","type":"narrow"},{"name":"activation of protein localization to cell tip","type":"narrow"},{"name":"positive regulation of protein localisation to cell tip","type":"exact"},{"name":"up regulation of protein localisation to cell tip","type":"exact"},{"name":"up regulation of protein localization to cell tip","type":"exact"},{"name":"up-regulation of protein localisation to cell tip","type":"exact"},{"name":"up-regulation of protein localization to cell tip","type":"exact"},{"name":"upregulation of protein localisation to cell tip","type":"exact"},{"name":"upregulation of protein localization to cell tip","type":"exact"}],"termid":"GO:1903068"}


id: PBO:0027733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0027733"}


id: MONDO:0100607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CFAP54 gene.","definition_xrefs":["PMID:37725231","PMID:39362668","PMID:39462806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 54","secondary_identifiers":["OMIM:621125"],"synonyms":[{"name":"CFAP54-related primary ciliary dyskinesia","type":"exact"}],"termid":"MONDO:0100607","xrefs":{"Monarch":{"xref_id":"0100607"}}}


id: GO:0080104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopropyl-glucosinolate = 5-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080104"}


id: PBO:0066677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLF pseudogene 1","termid":"PBO:0066677"}


id: GO:0015161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transbilayer of capsular-polysaccharides (Und-PP-GlcNAc-ManNAcA-Fuc4NAc (lipid III)) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of ECA. Capsular polysaccharides make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai","PMID:16816184","GOC:mtg_transport","PMID:12621029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"lipid III floppase activity","secondary_identifiers":["TC:2.A.66.2.12","TC:2.A.66.2.3"],"synonyms":[{"name":"capsular polysaccharide transmembrane transporter activity","type":"related"},{"name":"capsule polysaccharide transporter activity","type":"broad"},{"name":"undecaprenol-pyrophosphate O-antigen flippase activity","type":"exact"}],"termid":"GO:0015161"}


id: GO:0005872
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  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101141],"is_not":false,"summary":null,"term":"GO:0005872"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the minus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"minus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005872","terms_by_termid":{"GO:0005872":null}}


id: PBO:0002769
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein, unknown biological role","termid":"PBO:0002769"}


id: PBO:0109432
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog","termid":"PBO:0109432"}


id: MONDO:0018383
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of osteonecrosis that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis of genetic origin","secondary_identifiers":["UMLS:C5680035","MEDGEN:1842788","Orphanet:399380","GARD:21667"],"synonyms":[{"name":"bone necrosis of genetic origin","type":"exact"},{"name":"genetic osteonecrosis","type":"exact"}],"termid":"MONDO:0018383","xrefs":{"Monarch":{"xref_id":"0018383"}}}


id: PBO:0079337
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 22","termid":"PBO:0079337"}


id: MONDO:0014117
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4B3 (CMT4B3) is a subtype of Charcot-Marie-Tooth type 4 characterized by a childhood onset of slowly progressing, demyelinating sensorimotor neuropathy, focally folded myelin sheaths in nerve biopsy, reduced nerve conduction velocities (less than 38 m/s), and the typical CMT phenotype (i.e. distal muscle weakness and atrophy, and sensory loss).","definition_xrefs":["Orphanet:363981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4B3","secondary_identifiers":["SCTID:763345008","DOID:0110194","MEDGEN:811329","GARD:17578","UMLS:C3695063","OMIM:615284"],"synonyms":[{"name":"CMT4B3","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in SBF1","type":"exact"},{"name":"Charcot-Marie-Tooth disease with focally folded myelin","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 4B3","type":"related"},{"name":"SBF1 Charcot-Marie-Tooth disease type 4","type":"exact"}],"termid":"MONDO:0014117","xrefs":{"Monarch":{"xref_id":"0014117"}}}


id: PBO:0087915
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in regulating gluconeogenesis; also involved in the regulation of glyoxylate cycle genes; member of the zinc cluster family of proteins; confers resistance to ketoconazole","termid":"PBO:0087915"}


id: PBO:0041102
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basigin (Ok blood group)","termid":"PBO:0041102"}


id: PBO:0109282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTX2 pseudogene 1","termid":"PBO:0109282"}


id: PBO:0078004
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 4","termid":"PBO:0078004"}


id: GO:0002553
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a mast cell or group of mast cells.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"histamine secretion by mast cell","termid":"GO:0002553"}


id: MONDO:0700279
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of spastic cerebral palsy affecting three limbs; this could be both arms and a leg, or both legs and an arm. In some instances, it has referred to one upper and one lower extremity and the face.","definition_xrefs":["SCTID:702320006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic triplegia","secondary_identifiers":["UMLS:C5676777","MEDGEN:1814346"],"synonyms":[{"name":"spastic triplegic","type":"exact"},{"name":"triplegia spastic","type":"exact"},{"name":"triplegic CP","type":"exact"},{"name":"triplegic cerebral palsy","type":"exact"},{"name":"triplegic spastic","type":"exact"},{"name":"triplegic spasticity","type":"exact"}],"termid":"MONDO:0700279","xrefs":{"Monarch":{"xref_id":"0700279"}}}


id: PBO:0081319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 2","termid":"PBO:0081319"}


id: PBO:0035983
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035983"}


id: FYPO:0006888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type) when the cell is subject to iron ion starvation.","definition_xrefs":["PomBase:mah","PMID:29549126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to plasma membrane","termid":"FYPO:0002674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to plasma membrane during iron starvation","synonyms":[{"name":"normal protein localisation to plasma membrane during iron starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron ion starvation","type":"exact"},{"name":"normal protein localization to plasma membrane during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006888"}


id: PBO:0078285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 18-1","termid":"PBO:0078285"}


id: PBO:0114535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein, implicated in membrane organization or lipid metabolism","termid":"PBO:0114535"}


id: PR:Q10177
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A divalent metal cation transporter MntH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese transporter pdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.08","secondary_identifiers":["UniProtKB:Q10177"],"synonyms":[{"name":"Spom972h-mntH","type":"exact"}],"termid":"PR:Q10177"}


id: PBO:0069152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 403, pseudogene","termid":"PBO:0069152"}


id: GO:0033643
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  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[121662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"Any constituent part of a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell part","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0033643","terms_by_termid":{"GO:0085039":null}}


id: GO:0008610
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id: PBO:0049313
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id: MONDO:0011768
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id: PBO:0071795
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id: PBO:0000952
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id: GO:0055066
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id: GO:0070742
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id: FYPO:0003575
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id: MONDO:0000229
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id: FYPO:0005743
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: MONDO:0022602
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id: FYPO:0007017
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id: MONDO:1011944
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id: PBO:0075216
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sentan, cilia apical structure protein","termid":"PBO:0075216"}


id: PBO:0055843
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 3","termid":"PBO:0055843"}


id: PBO:0065021
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3","termid":"PBO:0065021"}


id: MONDO:0009579
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id: PBO:0003793
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id: GO:0005669
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id: PBO:0065675
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id: MONDO:0957229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hatipoglu immunodeficiency syndrome","secondary_identifiers":["UMLS:C5830439","OMIM:620331","MEDGEN:1841075"],"termid":"MONDO:0957229","xrefs":{"Monarch":{"xref_id":"0957229"}}}


id: PBO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1A","termid":"PBO:0039573"}


id: MONDO:0007504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thickened earlobes-conductive deafness syndrome is characterized by microtia with thickened ear lobes, micrognathia and conductive hearing loss due to congenital ossicular anomalies. It has been described in two families. The mode of inheritance is autosomal dominant.","definition_xrefs":["Orphanet:2405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickened earlobes-conductive deafness syndrome","secondary_identifiers":["OMIM:128980","SCTID:722476007","UMLS:C1851896","GARD:2195","MEDGEN:343676"],"synonyms":[{"name":"Escher Hirt syndrome","type":"related"},{"name":"Escher-Hirt syndrome","type":"exact"},{"name":"earlobes, thickened, with conductive deafness from incudostapedial abnormalities","type":"related"}],"termid":"MONDO:0007504","xrefs":{"Monarch":{"xref_id":"0007504"}}}


id: PBO:0038510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 5","termid":"PBO:0038510"}


id: GO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048378"}


id: PBO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily WD repeat protein","termid":"PBO:0000188"}


id: PBO:0049614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 17","termid":"PBO:0049614"}


id: PBO:0113189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity vacuolar phosphate transporter; exports phosphate from vacuolar lumen to cytosol; regulates phosphate and polyphosphate metabolism; acts upstream of Pho81p in regulation of PHO pathway; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth","termid":"PBO:0113189"}


id: PBO:0005166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-basic zinc finger","termid":"PBO:0005166"}


id: PBO:0088126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane polyphosphate polymerase; subunit of the vacuolar transporter chaperone (VTC) complex involved in synthesis and transfer of polyP to the vacuole; regulates membrane trafficking; role in non-autophagic vacuolar fusion; protein abundance increases in response to DNA replication stress","termid":"PBO:0088126"}


id: PBO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_aspartate_level","termid":"PBO:0030594"}


id: GO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly ligand-gated monoatomic ion channel activity","synonyms":[{"name":"intracellular ligand-gated ion channel activity","type":"broad"},{"name":"intracellular ligand-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0005217"}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: PR:000037083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8","termid":"PR:000028197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8)*2","type":"exact"}],"termid":"PR:000037083"}


id: PR:Q9UT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.03c gene.","definition_xrefs":["UniProtKB:Q9UT68","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.03c","synonyms":[{"name":"Spom972h-SPCC4F11.03c","type":"exact"}],"termid":"PR:Q9UT68"}


id: MONDO:0014241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any precursor B-cell acute lymphoblastic leukemia in which the cause of the disease is a mutation in the PAX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"precursor B-cell acute lymphoblastic leukemia","termid":"MONDO:0020511"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphoblastic, susceptibility to, 3","secondary_identifiers":["MEDGEN:816204","UMLS:C3809874","OMIM:615545"],"synonyms":[{"name":"ALL3","type":"related"},{"name":"PAX5 precursor B-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"PAX5 precursor B-cell acute lymphoblastic leukemia","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 3","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, type 3","type":"exact"},{"name":"precursor B-cell acute lymphoblastic leukaemia caused by mutation in PAX5","type":"exact"},{"name":"precursor B-cell acute lymphoblastic leukemia caused by mutation in PAX5","type":"exact"},{"name":"susceptibility to acute lymphoblastic leukaemia 3","type":"related"},{"name":"susceptibility to acute lymphoblastic leukemia 3","type":"related"}],"termid":"MONDO:0014241","xrefs":{"Monarch":{"xref_id":"0014241"}}}


id: GO:0044327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Distal part of the dendritic spine, that carries the post-synaptic density.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine head","secondary_identifiers":["NIF_Subcellular:sao952643730"],"synonyms":[{"name":"spine head","type":"broad"}],"termid":"GO:0044327"}


id: GO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transport (obsolete GO:0042969)","termid":"GO:0042969"}


id: SO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_DNA_chromosome","synonyms":[{"name":"circular single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000960"}


id: PBO:0085335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine synthase; functions in phospholipid biosynthesis; transcriptionally repressed by myo-inositol and choline","termid":"PBO:0085335"}


id: PBO:0041303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD5 antisense RNA 1","termid":"PBO:0041303"}


id: MONDO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transient autoimmune Inflammatory disorder of thyroid gland that occurs postpartum due to any partum problem. It is characterized by the presence of high titers of autoantibodies against thyroid peroxidase and thyroglobulin. Clinical signs include the triphasic thyroid hormone pattern: beginning with thyrotoxicosis, followed with hypothyroidism, then return to euthyroid state by 1 year postpartum","definition_xrefs":["MESH:D050032","NCIT:C114389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease","termid":"MONDO:0005623"},{"relation_name":"is_a","term_name":"puerperal disorder","termid":"MONDO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"postpartum thyroiditis","secondary_identifiers":["icd11.foundation:1577113218","SCTID:52772002","EFO:1001403","UMLS:C0271815","MEDGEN:78787"],"synonyms":[{"name":"post partum thyroiditis","type":"related"},{"name":"post-partum thyroiditides","type":"related"},{"name":"post-partum thyroiditis","type":"related"},{"name":"postpartum thyroiditides","type":"related"},{"name":"postpartum thyroiditis","type":"exact"},{"name":"thyroiditides, post-partum","type":"related"},{"name":"thyroiditides, postpartum","type":"related"},{"name":"thyroiditis, post-partum","type":"related"},{"name":"thyroiditis, postpartum","type":"related"}],"termid":"MONDO:0044014","xrefs":{"Monarch":{"xref_id":"0044014"}}}


id: PBO:0050528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin","termid":"PBO:0050528"}


id: MONDO:0010980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline malformations, multiple, with limb abnormalities and hypopituitarism","secondary_identifiers":["UMLS:C1832874","MEDGEN:371431","OMIM:601016","MESH:C536177","Orphanet:1678"],"synonyms":[{"name":"Dincsoy syndrome","type":"related"},{"name":"Dincsoy-Salih-Patel syndrome","type":"exact"},{"name":"midline malformations, multiple, with limb abnormalities and hypopituitarism","type":"exact"}],"termid":"MONDO:0010980","xrefs":{"Monarch":{"xref_id":"0010980"}}}


id: GO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + thymidine = adenosine + thymidine 5'-phosphate.","definition_xrefs":["MetaCyc:AMP--THYMIDINE-KINASE-RXN","EC:2.7.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"AMP-thymidine kinase activity","secondary_identifiers":["RHEA:14913"],"synonyms":[{"name":"AMP:dThd kinase activity","type":"related"},{"name":"AMP:deoxythymidine 5'-phosphotransferase activity","type":"related"},{"name":"AMP:deoxythymidine kinase activity","type":"related"},{"name":"AMP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenylate-nucleoside phosphotransferase activity","type":"related"},{"name":"adenylic acid:deoxythymidine 5'-phosphotransferase activity","type":"related"},{"name":"thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047667"}


id: MONDO:0008325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudoatrophoderma colli","secondary_identifiers":["MEDGEN:96061","MESH:C562909","OMIM:177350","UMLS:C0406561","SCTID:238840009"],"synonyms":[{"name":"Pseudoatrophoderma colli","type":"exact"}],"termid":"MONDO:0008325","xrefs":{"Monarch":{"xref_id":"0008325"}}}


id: FYPO:0007811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CMG replicative helicase activity, the 3'-5' DNA helicase activity that unwinds DNA during nuclear DNA replication, is decreased.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased CMG replicative helicase activity","synonyms":[{"name":"decreased 3'-5' DNA helicase activity during DNA replication","type":"exact"},{"name":"decreased Cdc45-MCM-GINS helicase activity","type":"exact"},{"name":"decreased Cdc45-MCM-GINS replicative helicase activity","type":"exact"},{"name":"decreased replicative helicase activity","type":"exact"}],"termid":"FYPO:0007811"}


id: PR:P87168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease Z 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.03c","synonyms":[{"name":"RNase Z 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-trz2","type":"exact"},{"name":"tRNA 3 endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNase Z 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87168"}


id: PBO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 6","termid":"PBO:0060271"}


id: PATO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of violet hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"violet","termid":"PATO:0001424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated violet","synonyms":[{"name":"pale violet","type":"exact"}],"termid":"PATO:0001703"}


id: PBO:0052733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 25","termid":"PBO:0052733"}


id: GO:0045483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans,trans-farnesyl diphosphate = aristolochene + diphosphate.","definition_xrefs":["EC:4.2.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aristolochene synthase activity","secondary_identifiers":["MetaCyc:ARISTOLOCHENE-SYNTHASE-RXN","RHEA:19825"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, aristolochene-forming)","type":"related"},{"name":"sesquiterpene cyclase activity","type":"broad"},{"name":"trans,trans-farnesyl diphosphate aristolochene-lyase activity","type":"related"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, aristolochene-forming)","type":"related"}],"termid":"GO:0045483"}


id: GO:0035809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urine volume","synonyms":[{"name":"regulation of urinary volume","type":"exact"},{"name":"regulation of urine flow","type":"exact"}],"termid":"GO:0035809"}


id: PBO:0042738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN pseudogene 1","termid":"PBO:0042738"}


id: GO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline catabolic process (obsolete GO:0019468)","synonyms":[{"name":"nopaline breakdown","type":"exact"},{"name":"nopaline catabolism","type":"exact"},{"name":"nopaline degradation","type":"exact"}],"termid":"GO:0019468"}


id: PBO:0077014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS2 antisense RNA 1","termid":"PBO:0077014"}


id: GO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem organization.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem structural organization","synonyms":[{"name":"regulation of meristem organisation","type":"exact"},{"name":"regulation of meristem organization","type":"broad"}],"termid":"GO:0009934"}


id: MONDO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral respiratory infection caused by a strain of influenza virus which is endemic in swine (pigs). Rarely reported in humans prior to 2009, the disease is caused by a mutated strain of swine influenza A (H1N1) virus. It is highly contagious and spreads mainly through coughing and sneezing. Signs and symptoms include fever, chills, coughing, sore throat headache, muscle ache, and generalized weakness. Antiviral medications are most effective in the first two days of the illness.","definition_xrefs":["NCIT:C80444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine influenza","secondary_identifiers":["MEDGEN:1385137","DOID:0050211","EFO:0005226","SCTID:442696006","UMLS:C0276357"],"synonyms":[{"name":"H1N1 Influenza","type":"exact"},{"name":"H1N1 Virus infection","type":"exact"},{"name":"H1N1 flu","type":"exact"},{"name":"Influenza A (H1N1)","type":"exact"},{"name":"Influenza A (H1N1) Virus infection","type":"exact"},{"name":"Swine influenza virus caused influenza","type":"exact"},{"name":"Swine influenza virus influenza","type":"exact"},{"name":"swine flu","type":"exact"}],"termid":"MONDO:0005460","xrefs":{"Monarch":{"xref_id":"0005460"}}}


id: GO:0009725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hormone","synonyms":[{"name":"growth regulator","type":"related"},{"name":"response to hormone stimulus","type":"exact"}],"termid":"GO:0009725"}


id: GO:0170034
data:
  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id: GO:1905129
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endocannabinoid signaling pathway that is involved in trans-synaptic signaling by endocannabinoid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:23040807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocannabinoid signaling pathway","termid":"GO:0071926"},{"relation_name":"part_of","term_name":"trans-synaptic signaling by endocannabinoid","termid":"GO:0099542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocannabinoid signaling pathway involved in trans-synaptic signaling","synonyms":[{"name":"endocannabinoid signalling pathway involved in trans-synaptic signaling by endocannabinoid","type":"exact"}],"termid":"GO:1905129"}


id: GO:0015253
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sugar/polyol channel activity (obsolete GO:0015253)","synonyms":[{"name":"sugar/polyol channel activity","type":"exact"}],"termid":"GO:0015253"}


id: PBO:0090232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transmembrane transporter","termid":"PBO:0090232"}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: MONDO:0015869
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of breast benign neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare benign breast tumor (obsolete MONDO:0015869)","secondary_identifiers":["Orphanet:180253"],"synonyms":[{"name":"rare breast benign neoplasm","type":"exact"}],"termid":"MONDO:0015869","xrefs":{"Monarch":{"xref_id":"0015869"}}}


id: PBO:0004794
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec13","termid":"PBO:0004794"}


id: MONDO:0100334
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete viral infectious disease or sequela (obsolete MONDO:0100334)","termid":"MONDO:0100334","xrefs":{"Monarch":{"xref_id":"0100334"}}}


id: PBO:0013478
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut Eight supressing Kinase","termid":"PBO:0013478"}


id: GO:1902752
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GOC:hjd","GOC:TermGenie","GO_REF:0000058","PMID:1526373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal amino acid absorption","termid":"GO:1902752"}


id: GO:0004843
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  {"annotated_genes":["SJAG_00573","SJAG_02341","SJAG_02419","SJAG_03752","SJAG_03429","SJAG_03686","SJAG_04215","SJAG_02774","SJAG_01768","SJAG_00795","SJAG_02244","SJAG_00764","SJAG_04651","SJAG_00546","SJAG_01312","SJAG_04497","SJAG_01528","SJAG_00966","SJAG_04538","SJAG_00087","SJAG_00644","SJAG_01481","SJAG_00742"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63501,65121,67178,68549,70910,71789,73692,74322,74614,75467,75473,75896,76947,78145,78202,78269,78699,79319,79842,82055,95301,99940,116328],"is_not":false,"summary":null,"term":"GO:0004843"}]},"cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["PMID:30783221","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02774":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140096","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"cysteine-type deubiquitinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5689973","Reactome:R-HSA-5696914","Reactome:R-HSA-6783177","Reactome:R-HSA-5696997","Reactome:R-HSA-5696600","Reactome:R-HSA-6782820","Reactome:R-HSA-5689972","Reactome:R-HSA-5690319","Reactome:R-HSA-5688837","Reactome:R-HSA-5696960","Reactome:R-HSA-5653770","Reactome:R-HSA-5696958","Reactome:R-HSA-8869456","Reactome:R-HSA-5696627","Reactome:R-HSA-8873946","Reactome:R-HSA-9033491","Reactome:R-HSA-6781764","Reactome:R-HSA-8853529","Reactome:R-HSA-5690759","Reactome:R-HSA-9653514","Reactome:R-HSA-5690080","Reactome:R-HSA-5690159","Reactome:R-HSA-5690790","Reactome:R-HSA-6781814","Reactome:R-HSA-6786171","Reactome:R-HSA-8986083","Reactome:R-HSA-5696564","Reactome:R-HSA-3640872","Reactome:R-HSA-8875443","EC:3.4.19.12","Reactome:R-HSA-5688797","Reactome:R-HSA-6781897","Reactome:R-HSA-6782628","Reactome:R-HSA-8853514","Reactome:R-HSA-6807206","Reactome:R-HSA-5696534","Reactome:R-HSA-5690196","Reactome:R-HSA-2179291","Reactome:R-HSA-5696465","Reactome:R-HSA-5696968","Reactome:R-HSA-5690157","Reactome:R-HSA-5690152","Reactome:R-HSA-5696605","Reactome:R-HSA-5689950","Reactome:R-HSA-6807118","Reactome:R-HSA-8862184","Reactome:R-HSA-6781779","Reactome:R-HSA-5696872","Reactome:R-HSA-3215295","Reactome:R-HSA-8853515","Reactome:R-HSA-5697009","Reactome:R-HSA-3215310","Reactome:R-HSA-6782069","Reactome:R-HSA-870437","Reactome:R-HSA-5691381","Reactome:R-HSA-5696945","Reactome:R-HSA-1358795","Reactome:R-HSA-5655466","Reactome:R-HSA-5696947","Reactome:R-HSA-6782106","GO:0036459","Reactome:R-HSA-4641236","Reactome:R-HSA-9033478","Reactome:R-HSA-8853503","Reactome:R-HSA-8865182"],"synonyms":[{"name":"UBP","type":"narrow"},{"name":"UCH2","type":"narrow"},{"name":"deubiquitinase","type":"broad"},{"name":"deubiquitinase activity","type":"broad"},{"name":"deubiquitinating enzyme","type":"broad"},{"name":"deubiquitylase","type":"broad"},{"name":"thiol-dependent deubiquitinase","type":"exact"},{"name":"thiol-dependent ubiquitin-specific protease activity","type":"exact"},{"name":"thiol-dependent ubiquitinyl hydrolase activity","type":"exact"},{"name":"ubiquitin C-terminal hydrolase","type":"related"},{"name":"ubiquitin hydrolase activity","type":"broad"},{"name":"ubiquitin-specific protease activity","type":"broad"},{"name":"ubiquitinyl hydrolase 1 activity","type":"narrow"},{"name":"ubiquitinyl hydrolase activity","type":"broad"}],"termid":"GO:0004843","terms_by_termid":{"GO:0004843":null}}


id: MONDO:0002076
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id: FYPO:0001467
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: GO:1990893
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89871,113687],"is_not":false,"summary":null,"term":"GO:1990893"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic chromosome centromere condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic chromosome condensation at kinetochore","type":"exact"}],"termid":"GO:1990893","terms_by_termid":{"GO:1990893":null}}


id: GO:1905754
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  {"annotated_genes":["SJAG_03638","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93752,115039],"is_not":false,"summary":null,"term":"GO:1905754"}]},"cv_name":"cellular_component","definition":"Any nucleus that is part of a ascospore-type prospore.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01867":null,"SJAG_03638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"ascospore-type prospore nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus of ascospore-type prospore","type":"exact"},{"name":"nucleus of ascospore-type prospore","type":"exact"}],"termid":"GO:1905754","terms_by_termid":{"GO:1905754":null}}


id: GO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine acetylation","termid":"GO:0030920"}


id: PBO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 2 Y-linked","termid":"PBO:0048857"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: GO:0048298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgA isotypes","synonyms":[{"name":"activation of isotype switching to IgA isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"positive regulation of class switching to IgA isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgA isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgA isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgA isotypes","type":"exact"}],"termid":"GO:0048298"}


id: MONDO:0008890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive bulbar palsy involves the brain stem. The brain stem is the part of the brain needed for swallowing, speaking, chewing, and other functions. Signs and symptoms of progressive bulbar palsy include difficulty swallowing, weak jaw and facial muscles, progressive loss of speech, and weakening of the tongue. Additional symptoms include less prominent weakness in the arms and legs, and outbursts of laughing or crying (called emotional lability). Progressive bulbar palsy is considered a variant form of amyotrophic lateral sclerosis (ALS). Many people with progressive bulbar palsy later develop ALS. While there is no cure for progressive bulbar palsy or for ALS, doctors can treat symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"},{"relation_name":"is_a","term_name":"riboflavin transporter deficiency","termid":"MONDO:0008891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive bulbar palsy","secondary_identifiers":["MEDGEN:18290","GARD:10928","MESH:D010244","UMLS:C0030442","ICD9:335.22","ICD10CM:G12.22","EFO:0003783","DOID:681","icd11.foundation:1143049440","NCIT:C85026","SCTID:54304004"],"synonyms":[{"name":"Fazio-Londe disease","type":"narrow"},{"name":"bulbar palsy, progressive, of childhood","type":"narrow"},{"name":"progressive bulbar atrophy","type":"related"}],"termid":"MONDO:0008890","xrefs":{"Monarch":{"xref_id":"0008890"}}}


id: MONDO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atelectasis of the right middle pulmonary lobe, with chronic pneumonitis. (Dorland, 27th ed)","definition_xrefs":["MESH:D008878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle lobe syndrome","secondary_identifiers":["EFO:0007367","MEDGEN:6393","DOID:2810","SCTID:28295001","UMLS:C0026069"],"termid":"MONDO:0005847","xrefs":{"Monarch":{"xref_id":"0005847"}}}


id: GO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete SAR small monomeric GTPase activity (obsolete GO:0003932)","synonyms":[{"name":"SAR small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003932"}


id: PBO:0077663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10d","termid":"PBO:0077663"}


id: PBO:0076653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 10","termid":"PBO:0076653"}


id: GO:0006422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA.","definition_xrefs":["GOC:mah","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"aspartyl-tRNA aminoacylation","termid":"GO:0006422"}


id: GO:1901510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-microperfuranone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone metabolic process","synonyms":[{"name":"(-)-microperfuranone metabolism","type":"exact"}],"termid":"GO:1901510"}


id: GO:0072312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular epithelial cell. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelium development","termid":"GO:0072244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: MONDO:0032011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder defined by a set of physiological abnormalities without clearly associated clinical manifestations. [Orphanet:377790]","definition_xrefs":["Orphanet:377790"],"gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly (obsolete MONDO:0032011)","termid":"MONDO:0032011","xrefs":{"Monarch":{"xref_id":"0032011"}}}


id: PBO:0041205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Burkitt lymphoma variant rearranging region 1","termid":"PBO:0041205"}


id: CHEBI:26981
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threitol","termid":"CHEBI:26981"}


id: GO:0035851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Krueppel-associated box (KRAB) domain of a protein. The approximately 75 amino acid KRAB domain is enriched in charged amino acids, and is found in the N-terminal regions of many zinc finger-containing transcription factors.","definition_xrefs":["InterPro:IPR001909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Krueppel-associated box domain binding","synonyms":[{"name":"KRAB domain binding","type":"exact"},{"name":"Krueppel-associated box binding","type":"exact"}],"termid":"GO:0035851"}


id: PBO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: PBO:0070526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 25","termid":"PBO:0070526"}


id: MONDO:0020353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Peters anomaly","termid":"MONDO:0011414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"von Hippel anomaly","secondary_identifiers":["Orphanet:98941","icd11.foundation:1620371681"],"termid":"MONDO:0020353","xrefs":{"Monarch":{"xref_id":"0020353"}}}


id: FYPO:0002266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cell wall polysaccharide level","synonyms":[{"name":"decreased cell wall polysaccharide accumulation","type":"related"},{"name":"decreased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall polysaccharide level during vegetative growth","type":"exact"},{"name":"reduced cell wall polysaccharide level","type":"exact"}],"termid":"FYPO:0002266"}


id: PBO:0075022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-33","termid":"PBO:0075022"}


id: PBO:0001821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1 (predicted)","termid":"PBO:0001821"}


id: PBO:0112311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta induced lncRNA activating myofibroblasts","termid":"PBO:0112311"}


id: PBO:0084615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease; involved in N-terminal processing of pro-a-factor to mature form; expressed in both haploids and diploids; one of two yeast homologs of human insulin-degrading enzyme (hIDE); homolog Axl1p is also involved in processing of pro-a-factor","termid":"PBO:0084615"}


id: MONDO:0012847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the NIPAL4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar ichthyosis","termid":"MONDO:0017778"},{"relation_name":"is_a","term_name":"congenital non-bullous ichthyosiform erythroderma","termid":"MONDO:0019306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 6","secondary_identifiers":["OMIM:612281","MEDGEN:436851","DOID:0060715","GARD:15547","UMLS:C2677065"],"synonyms":[{"name":"ARCI6","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 6","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive 6","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 6","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive, Nipal4-related","type":"related"}],"termid":"MONDO:0012847","xrefs":{"Monarch":{"xref_id":"0012847"}}}


id: PBO:0045431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L1 pseudogene 2","termid":"PBO:0045431"}


id: PBO:0003615
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar to S. cerevisiae HLJ1, but has different domain arrangement","termid":"PBO:0003615"}


id: MONDO:0009351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Homocarnosinosis is a metabolic defect characterized by progressive spastic diplegia, intellectual deficit and retinitis pigmentosa. This extremely rare disorder has been reported in only one family, namely a woman and three of her children. The latter showed progressive spastic diplegia, mental retardation and retinitis pigmentosa but their mother was symptom free. It is therefore uncertain whether there is a relationship between the biochemical defect and the clinical symptoms. Inheritance in the reported family seems to be autosomal dominant.","definition_xrefs":["Orphanet:2168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-amino butyric acid metabolism disorder","termid":"MONDO:0000698"},{"relation_name":"is_a","term_name":"inborn disorder of peptide metabolism","termid":"MONDO:0019232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"homocarnosinosis","secondary_identifiers":["SCTID:61764000","GARD:2730","DOID:0060177","MEDGEN:75703","OMIM:236130","UMLS:C0268632","MESH:C535328","ICD9:277.89","icd11.foundation:166229372"],"synonyms":[{"name":"Homocarnosinase deficiency","type":"exact"},{"name":"homocarnosinosis","type":"exact"}],"termid":"MONDO:0009351","xrefs":{"Monarch":{"xref_id":"0009351"}}}


id: GO:0002869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"is_a","term_name":"positive regulation of B cell apoptotic process","termid":"GO:0002904"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"B cell deletion","termid":"GO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell deletion","synonyms":[{"name":"activation of B cell deletion","type":"narrow"},{"name":"positive regulation of B lymphocyte deletion","type":"exact"},{"name":"positive regulation of B-cell deletion","type":"exact"},{"name":"positive regulation of B-lymphocyte deletion","type":"exact"},{"name":"stimulation of B cell deletion","type":"narrow"},{"name":"up regulation of B cell deletion","type":"exact"},{"name":"up-regulation of B cell deletion","type":"exact"},{"name":"upregulation of B cell deletion","type":"exact"}],"termid":"GO:0002869"}


id: PBO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0030911"}


id: GO:0140560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine. The enzyme, found in animals and insects, is involved in the biosynthesis of the alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)- beta-D-glucosyl trisaccharide on epidermal growth factor-like (EGF- like) domains.","definition_xrefs":["RHEA:22820","PMID:22117070","PMID:8982869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"xylosyl alpha-1,3-xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.62"],"termid":"GO:0140560"}


id: PBO:0055286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2713","termid":"PBO:0055286"}


id: PBO:0046509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH3 antisense RNA 1","termid":"PBO:0046509"}


id: GO:0035355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex containing Toll-like receptor 2 (TLR2) and Toll-like receptor 6 (TLR6).","definition_xrefs":["PMID:19931471","GOC:add","GOC:signaling","PMID:21481769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Toll-like receptor 2-Toll-like receptor 6 protein complex","secondary_identifiers":["GO:0038126"],"synonyms":[{"name":"TLR2-TLR6 protein complex","type":"exact"},{"name":"TLR2:TLR6 heterodimer","type":"exact"},{"name":"TLR6:TLR2 complex","type":"exact"},{"name":"toll-like receptor TLR6:TLR2 heterodimeric complex","type":"exact"}],"termid":"GO:0035355"}


id: PBO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation","termid":"PBO:0030848"}


id: PBO:0062291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 2 pseudogene","termid":"PBO:0062291"}


id: PBO:0059938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 24","termid":"PBO:0059938"}


id: PBO:0028929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_localization","termid":"PBO:0028929"}


id: PBO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 22","termid":"PBO:0044444"}


id: MONDO:0022546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal cell nevus anodontia abnormal bone mineralization (obsolete MONDO:0022546)","termid":"MONDO:0022546","xrefs":{"Monarch":{"xref_id":"0022546"}}}


id: PBO:0040018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 7","termid":"PBO:0040018"}


id: GO:0140499
data:
  {"annotated_genes":["SJAG_03681","SJAG_03353","SJAG_03126","SJAG_01679","SJAG_00883","SJAG_01297","SJAG_04259","SJAG_02169","SJAG_02336","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96095],"is_not":false,"summary":null,"term":"GO:0140499"},{"annotations":[101518,115795,116288,113964,117922,109204,92604,110234,105842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of negative regulation of mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic metaphase/anaphase transition","termid":"GO:0045842"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"is_a","term_name":"negative regulation of spindle checkpoint","termid":"GO:0090233"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0000070","GO:0023052","GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140499","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0100205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 4.","definition_xrefs":["PMID:27197630","MONDO:patterns/infectious_disease_by_agent","PMID:21636318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 4 infectious disease","synonyms":[{"name":"human rubulavirus 4 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 4","type":"exact"},{"name":"infection caused by parainfluenza virus 4","type":"related"},{"name":"infection due to human parainfluenza virus 4","type":"exact"},{"name":"infection due to parainfluenza virus 4","type":"related"}],"termid":"MONDO:0100205","xrefs":{"Monarch":{"xref_id":"0100205"}}}


id: PBO:0073388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 4","termid":"PBO:0073388"}


id: GO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity (obsolete GO:0062002)","termid":"GO:0062002"}


id: PBO:0049007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormone subunit beta 5","termid":"PBO:0049007"}


id: PBO:0091490
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rad54delta cells","termid":"PBO:0091490"}


id: GO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 sucrose = D-glucose + 1F-beta-D-fructosylsucrose.","definition_xrefs":["EC:2.4.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"sucrose 1F-fructosyltransferase activity","secondary_identifiers":["RHEA:23312","MetaCyc:RXN-1781"],"synonyms":[{"name":"SST activity","type":"related"},{"name":"sucrose 1(F)-fructosyltransferase activity","type":"related"},{"name":"sucrose-sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1'-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"sucrose:sucrose fructosyltransferase activity","type":"related"}],"termid":"GO:0050306"}


id: GO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet alpha granule.","definition_xrefs":["GOC:mah","PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"platelet alpha granule lumen","synonyms":[{"name":"platelet alpha-granule lumen","type":"exact"}],"termid":"GO:0031093"}


id: PBO:0027291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_peroxidase_activity","termid":"PBO:0027291"}


id: PBO:0040433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A1","termid":"PBO:0040433"}


id: SO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by two or more overlapping guide RNAs (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_domain","synonyms":[{"name":"editing domain","type":"exact"}],"termid":"SO:0000606"}


id: FYPO:0002314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-geranylgeranyl diphosphate (GGPP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular GGPP level","termid":"FYPO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"GGPP absent from cell","synonyms":[{"name":"2-trans,6-trans,10-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"GGPP absent from cell during mitotic cell cycle","type":"related"},{"name":"GGPP absent from cell during vegetative growth","type":"exact"},{"name":"all-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"all-trans-geranylgeranyl pyrophosphate absent from cell","type":"exact"}],"termid":"FYPO:0002314"}


id: GO:0010591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of lamellipodium assembly","synonyms":[{"name":"regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010591"}


id: MONDO:0016762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcornea-corectopia-macular hypoplasia syndrome is characterized by microcornea, which may also be accompanied by corectopia and macular hypoplasia. It has been described in three individuals from two successive generations of one family.","definition_xrefs":["Orphanet:2535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcornea-corectopia-macular hypoplasia syndrome","secondary_identifiers":["MEDGEN:444078","MESH:C537551","UMLS:C2931531"],"synonyms":[{"name":"microcornea corectopia macular hypoplasia","type":"related"}],"termid":"MONDO:0016762","xrefs":{"Monarch":{"xref_id":"0016762"}}}


id: MONDO:0958234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bethlem myopathy","termid":"MONDO:0008029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Bethlem myopathy 1C","secondary_identifiers":["MEDGEN:1854240","OMIM:620726","UMLS:C5935581"],"termid":"MONDO:0958234","xrefs":{"Monarch":{"xref_id":"0958234"}}}


id: MONDO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac-urogenital syndrome","secondary_identifiers":["MEDGEN:1648333","OMIM:618280","Orphanet:647811","UMLS:C4748946"],"synonyms":[{"name":"CARDIAC-UROGENITAL SYNDROME","type":"exact"},{"name":"CUGS","type":"exact"}],"termid":"MONDO:0032653","xrefs":{"Monarch":{"xref_id":"0032653"}}}


id: PBO:0085492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prolyl-tRNA synthetase; N-terminal domain shows weak homology to prokaryotic posttransfer editing domain, but does not possess posttransfer editing activity; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0085492"}


id: PBO:0089148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA:L-glutamate N-acetyltransferase","termid":"PBO:0089148"}


id: GO:0045064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a T-helper 2 (Th2) cell. A Th2 cell is a CD4-positive, alpha-beta T cell that has the phenotype GATA-3-positive and produces interleukin-4.","definition_xrefs":["CL:0000546","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell differentiation","termid":"GO:0042093"},{"relation_name":"part_of","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell differentiation","synonyms":[{"name":"T-helper 2 cell development","type":"related"}],"termid":"GO:0045064"}


id: MONDO:0012853
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89120],"is_not":false,"summary":null,"term":"MONDO:0012853"}]},"cv_name":"mondo","definition":"A rare premature aging syndrome characterized by pre-and postnatal growth retardation, a congenital premature-aged appearance with distinctive craniofacial dysmorphism (wide calvaria with large open anterior fontanel and wide metopic suture, broad forehead, small face, micrognathia), markedly diminished subcutaneous fat, cutis laxa and wrinkled skin, without delay in psychomotor development. Scant, brittle hair, hypoplastic nails and delayed, abnormal dentition, as well as hypoplastic distal phalanges, umbilical hernia and eye abnormalities (myopia/hyperopia, strabismus), are also commonly associated.","definition_xrefs":["Orphanet:2963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Fontaine progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1201","Orphanet:2095","GARD:4497","UMLS:C2676780","OMIM:612289","MESH:C537290","OMIM:233500","SCTID:205800003","MEDGEN:394125","ICD9:759.89"],"synonyms":[{"name":"FPS","type":"exact"},{"name":"Fontaine progeroid syndrome","type":"exact"},{"name":"GCM syndrome","type":"exact"},{"name":"GCMS","type":"exact"},{"name":"Gorlin Chaudhry Moss syndrome","type":"exact"},{"name":"Gorlin-Chaudhry-Moss Syndrome","type":"exact"},{"name":"Gorlin-Chaudhry-Moss syndrome","type":"exact"},{"name":"Petty Laxova Wiedemann syndrome","type":"related"},{"name":"Petty syndrome","type":"exact"},{"name":"Petty-Laxova-Wiedemann syndrome","type":"exact"},{"name":"craniofacial dysostosis, hypertrichosis, Hypoplasia of labia majora, dental and eye anomalies, patent ductus arteriosus, and normal intelligence","type":"exact"},{"name":"craniofacial dysostosis, hypertrichosis, hypoplasia of labia majora","type":"exact"},{"name":"craniofacial dysostosis, patent ductus arteriosus, hypertrichosis, hypoplasia of labia majora, dental and eye anomalies","type":"related"},{"name":"craniofacial dysostosis-genital, dental, cardiac anomalies syndrome","type":"exact"},{"name":"cranofacial dysostosis-hypertrichosis-hypoplasia of labia majora syndrome","type":"exact"},{"name":"dental and eye anomalies, patent ductus arteriosus, and normal intelligence","type":"exact"},{"name":"dental and eye anomalies-patent ductus arteriosus-normal intelligence syndrome","type":"exact"},{"name":"progeroid syndrome Petty type","type":"exact"},{"name":"progeroid syndrome congenital Petty type","type":"exact"},{"name":"progeroid syndrome, Petty type","type":"exact"},{"name":"progeroid syndrome, congenital, Petty type","type":"narrow"}],"termid":"MONDO:0012853","terms_by_termid":{"MONDO:0012853":null},"xrefs":{"Monarch":{"xref_id":"0012853"}}}


id: GO:0106259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a symbiont from one host cell to another.","definition_xrefs":["PMID:19816653","PMID:19262673","PMID:29567712","GOC:vw","PMID:18456802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migration in host","termid":"GO:0044001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cell-to-cell migration in host","synonyms":[{"name":"cell-to-cell migration in host","type":"exact"},{"name":"symbiont-mediated dissemination across host cells","type":"exact"}],"termid":"GO:0106259"}


id: PBO:0063043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palladin, cytoskeletal associated protein","termid":"PBO:0063043"}


id: PBO:0085724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the HOG (high osmolarity glycerol) pathway; negatively regulates Hog1p by recruitment of phosphatase Ptc1p to the Pbs2p-Hog1p complex; interacts with Bck1p and down regulates the cell wall integrity pathway; found in the nucleus and cytoplasm; contains an SH3 domain and a Ptc1p binding domain (PBM)","termid":"PBO:0085724"}


id: MOD:01771
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:15609361","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: PBO:0090182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom7","termid":"PBO:0090182"}


id: PBO:0081323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114","termid":"PBO:0081323"}


id: PBO:0068094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 401","termid":"PBO:0068094"}


id: PBO:0055604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3042","termid":"PBO:0055604"}


id: PBO:0054974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2388","termid":"PBO:0054974"}


id: GO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate phosphatase activity (obsolete GO:0034416)","synonyms":[{"name":"2,3-bisphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglyceric acid phosphatase activity","type":"exact"},{"name":"diphosphoglycerate phosphatase activity","type":"exact"},{"name":"glycerate-2,3-diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034416"}


id: PBO:0088820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L29","termid":"PBO:0088820"}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_02514","SJAG_06270","SJAG_03508","SJAG_04455","SJAG_01790","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72273,76378,97546,103208,109510,112159],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["PMID:22119525","GOC:vw","PMID:21561862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: PBO:0087704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator","termid":"PBO:0087704"}


id: PBO:0083524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RRP15, which is required for ribosomal RNA processing","termid":"PBO:0083524"}


id: MONDO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute insulin response","secondary_identifiers":["UMLS:C1866503","MEDGEN:355729","OMIM:601676"],"synonyms":[{"name":"AIR","type":"exact"},{"name":"acute insulin response","type":"exact"}],"termid":"MONDO:0011126","xrefs":{"Monarch":{"xref_id":"0011126"}}}


id: PBO:0088877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial inner membrane Cmc2","termid":"PBO:0088877"}


id: MONDO:0019516
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"}]},"cv_name":"mondo","definition":"Familial exudative vitreoretinopathy (FEVR) is a rare hereditary vitreoretinal disorder characterized by abnormal or incomplete vascularization of the peripheral retina leading to variable clinical manifestations ranging from no effects to minor anomalies, or even retinal detachment with blindness.","definition_xrefs":["Orphanet:891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050535","MESH:C580083","UMLS:C0339539","GARD:1613","MEDGEN:573220","OMIMPS:133780","ICD9:362.10","SCTID:232063007"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"exact"},{"name":"FEVR","type":"exact"},{"name":"exudative vitreoretinopathy, familial","type":"related"},{"name":"familial exudative vitreoretinopathy","type":"exact"}],"termid":"MONDO:0019516","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null},"xrefs":{"Monarch":{"xref_id":"0019516"}}}


id: PBO:0113281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase required for mitotic exit; regulates mitotic spindle assembly, nuclear shape, and protein localization to the nucleolus and SPBs; controls targeting and activation of Rho1p at the division site via Rho1p-GEFs; role in adaptation to DNA damage promotes genome instability during replicative senescence; regulates meiotic commitment, spindle assembly, chiasmata formation, recombination intermediate resolution and SC disassembly; human homologs PLK1 and PLK3 complement cdc5 mutants","termid":"PBO:0113281"}


id: PBO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11","termid":"PBO:0060714"}


id: PBO:0052696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 4","termid":"PBO:0052696"}


id: PBO:0043611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD3-BMI1 readthrough","termid":"PBO:0043611"}


id: PR:Q9UTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YbaZ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02119","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkyltransferase-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.04c","secondary_identifiers":["UniProtKB:Q9UTN9"],"synonyms":[{"name":"Spom972h-ybaZ","type":"exact"}],"termid":"PR:Q9UTN9"}


id: MONDO:0020130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malformation of the cerebellar vermis (obsolete MONDO:0020130)","secondary_identifiers":["Orphanet:98514"],"termid":"MONDO:0020130","xrefs":{"Monarch":{"xref_id":"0020130"}}}


id: PBO:0060150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 1","termid":"PBO:0060150"}


id: PBO:0046896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20B pseudogene 1","termid":"PBO:0046896"}


id: FYPO:0000268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"},{"relation_name":"is_a","term_name":"sensitive to UV","termid":"FYPO:0002550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to UV during vegetative growth","synonyms":[{"name":"UV resistance: decreased during vegetative growth","type":"related"},{"name":"decreased vegetative cell population growth during cellular response to UV","type":"exact"},{"name":"hypersensitive to UV during vegetative growth","type":"exact"},{"name":"increased sensitivity to UV irradiation during vegetative growth","type":"exact"},{"name":"sensitive to UV during mitotic cell cycle","type":"related"},{"name":"sensitive to ultraviolet light during vegetative growth","type":"exact"}],"termid":"FYPO:0000268"}


id: MONDO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare breast adenocarcinoma with sebaceous differentiation.","definition_xrefs":["NCIT:C40369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"},{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sebaceous breast carcinoma","secondary_identifiers":["UMLS:C1519207","DOID:5760","MEDGEN:276789"],"synonyms":[{"name":"breast sebaceous adenocarcinoma","type":"exact"},{"name":"sebaceous adenocarcinoma of breast","type":"exact"},{"name":"sebaceous breast carcinoma","type":"exact"}],"termid":"MONDO:0003635","xrefs":{"Monarch":{"xref_id":"0003635"}}}


id: PBO:0052883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-6","termid":"PBO:0052883"}


id: MONDO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extraosseous Ewings sarcoma-primitive neuroepithelial tumor (obsolete MONDO:0003230)","termid":"MONDO:0003230","xrefs":{"Monarch":{"xref_id":"0003230"}}}


id: MONDO:0800092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary inflammatory or rheumatoid-like osteoarthropathy (obsolete MONDO:0800092)","secondary_identifiers":["Orphanet:498445"],"synonyms":[{"name":"genetic inflammatory or rheumatoid-like osteoarthropathy","type":"exact"}],"termid":"MONDO:0800092","xrefs":{"Monarch":{"xref_id":"0800092"}}}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PBO:0088081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ub-like protein; Ub-like protein conjugated to phosphatidylethanolamine (PE); role in membrane fusion during autophagosome formation; membrane anchored Atg8p-PE is involved in phagophore expansion during autophagosome formation; deconjugation is also required for biogenesis; targets Atg1p to autophagosomes; binds to the Atg1p-Atg13p complex, triggers its vacuolar degradation; role in vacuolar membrane protein turnover during early stationary phase; component of autophagosomes and Cvt vesicles","termid":"PBO:0088081"}


id: RO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_growth_of","termid":"RO:0002343"}


id: PBO:0051294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-17","termid":"PBO:0051294"}


id: PBO:0040014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMC2 antisense RNA 1","termid":"PBO:0040014"}


id: GO:0036119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platelet-derived growth factor","synonyms":[{"name":"response to PDGF stimulus","type":"exact"},{"name":"response to platelet-derived growth factor stimulus","type":"exact"}],"termid":"GO:0036119"}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: PBO:0074585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3A","termid":"PBO:0074585"}


id: MONDO:0100210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone insensitivity syndrome with immune dysregulation","secondary_identifiers":["OMIMPS:245590"],"termid":"MONDO:0100210","xrefs":{"Monarch":{"xref_id":"0100210"}}}


id: FYECO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Uracil was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000070 absence of uracil (obsolete FYECO:0000070)","termid":"FYECO:0000070"}


id: SO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trans_splicing_acceptor_site which appends the 22nt SL1 RNA leader sequence to the 5' end of most mRNAs.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_acceptor_site","termid":"SO:0000706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL1_acceptor_site","synonyms":[{"name":"SL1 acceptor site","type":"exact"}],"termid":"SO:0000708"}


id: FYPO:0007338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 methylation at centromere during vegetative growth","termid":"FYPO:0007337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3-K4 trimethylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 trimethylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3K4me3 at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at centromere","type":"exact"}],"termid":"FYPO:0007338"}


id: GO:2000401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte migration","termid":"GO:2000401"}


id: PBO:0049746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box transcription factor 1","termid":"PBO:0049746"}


id: PBO:0000448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf5","termid":"PBO:0000448"}


id: PBO:0087812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetrameric histone acetyltransferase; has similarity to Gcn5p, Hat1p, Elp3p, and Hpa3p; acetylates histones H3 and H4 in vitro and exhibits autoacetylation activity; also acetylates polyamines","termid":"PBO:0087812"}


id: GO:0035458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interferon-beta","termid":"GO:0035456"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interferon-beta","synonyms":[{"name":"cellular response to beta-1 interferon","type":"related"},{"name":"cellular response to fiblaferon","type":"exact"},{"name":"cellular response to fibroblast interferon","type":"exact"}],"termid":"GO:0035458"}


id: MONDO:0019109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CANOMAD syndrome (Chronic Ataxic Neuropathy, Ophthalmoplegia, Monoclonal IgM protein, cold Agglutinins and Disialosyl antibodies) is a rare chronic immune-mediated demyelinating polyneuropathy.","definition_xrefs":["Orphanet:71279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"CANOMAD syndrome","secondary_identifiers":["UMLS:C2931684","GARD:9778","SCTID:715624006","MEDGEN:419872","MESH:C537980"],"synonyms":[{"name":"chronic ataxic neuropathy ophthalmoplegia M-protein agglutination disialosyl antibodies syndrome","type":"related"},{"name":"chronic ataxic neuropathy-ophthalmoplegia-IgM paraprotein-cold agglutinins-disialosyl antibodies syndrome","type":"exact"},{"name":"chronic sensory ataxic neuropathy with anti-disialosyl antibodies","type":"related"},{"name":"chronic sensory ataxic neuropathy with anti-dyalosyl IgM antibodies","type":"exact"}],"termid":"MONDO:0019109","xrefs":{"Monarch":{"xref_id":"0019109"}}}


id: PBO:0072661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 3","termid":"PBO:0072661"}


id: GO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organofluorine metabolic process","termid":"GO:0090348"},{"relation_name":"is_a","term_name":"negative regulation of organohalogen metabolic process","termid":"GO:0090349"},{"relation_name":"negatively_regulates","term_name":"organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organofluorine metabolic process","termid":"GO:0090350"}


id: GO:0045468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that ensures that the R8 cells are selected in a precise progressive pattern so that they are evenly spaced throughout the eye disc.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R8 cell spacing in compound eye","synonyms":[{"name":"R8 cell spacing in compound eye","type":"related"},{"name":"regulation of R8 spacing","type":"exact"}],"termid":"GO:0045468"}


id: GO:0019497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexachlorocyclohexane, a cyclohexane derivative with 6 chlorine atoms attached to the hexane ring. Hexachlorocyclohexane consists of a mixture of 8 different isomers and was used a commercial insecticide. It is persistent in the environment, causing serious soil pollution.","definition_xrefs":["UM-BBD_pathwayID:ghch","UM-BBD_pathwayID:hch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexachlorocyclohexane metabolic process","synonyms":[{"name":"hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0019497"}


id: MONDO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrasomy 9p is a rare autosomal anomaly characterized by pre- and postnatal growth retardation, psychomotor delay, mild to moderate intellectual disability, hypotonia, microcephaly, dysmorphic features (ocular hypertelorism, low-set, malformed ears, bulbous/beaked nose, microretrognathia, enophthalmos/micropthalmia, epicanthus, strabismus), cleft lip/palate, skeletal abnormalities (hypoplastic nails/distal phalanges, short stature, short neck, contractures), congenital heart defects, renal and urogenital malformations (renal hypoplasia, genital hypoplasia, cryptorchidism).","definition_xrefs":["Orphanet:3310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication of the short arm of chromosome 9","termid":"MONDO:0700043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy 9p","secondary_identifiers":["MESH:C538027","GARD:42","icd11.foundation:1426428869","MEDGEN:162876","SCTID:715530004","UMLS:C0795832","NORD:964"],"synonyms":[{"name":"Chromosome 9, Tetrasomy 9p","type":"exact"},{"name":"Isochromosome 9p","type":"exact"},{"name":"Mosaic tetrasomy 9p","type":"related"},{"name":"chromosome 9p tetrasomy","type":"related"},{"name":"tetrasomy of short arm of chromosome 9","type":"related"},{"name":"tetrasomy type 9p","type":"exact"}],"termid":"MONDO:0018030","xrefs":{"Monarch":{"xref_id":"0018030"}}}


id: PBO:0059358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 3","termid":"PBO:0059358"}


id: PBO:0028068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028068"}


id: PBO:0085870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; highly induced in zinc-depleted conditions and has increased expression in NAP1 deletion mutants; VEL1 has a paralog, YOR387C, that arose from a single-locus duplication","termid":"PBO:0085870"}


id: GO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + cortisol = CoA + cortisol 21-acetate.","definition_xrefs":["EC:2.3.1.27","RHEA:17073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cortisol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02837","MetaCyc:CORTISOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:cortisol O-acetyltransferase activity","type":"related"},{"name":"corticosteroid acetyltransferase activity","type":"related"},{"name":"corticosteroid-21-O-acetyltransferase activity","type":"related"},{"name":"cortisol acetyltransferase activity","type":"related"}],"termid":"GO:0047784"}


id: MOD:01691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-(12-ketomyristoyl)-L-cysteine.","definition_xrefs":["PubMed:19053188","RESID:AA0517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-(12-ketomyristoyl)-L-cysteine","synonyms":[{"name":"2-(12-oxotetradecanoyl)amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-(12-oxomyristoyl)cysteine","type":"exact"},{"name":"N-(12-ketomyristoyl)-L-cysteine","type":"exact"},{"name":"N-(12-oxotetradecanoyl)cysteine","type":"exact"}],"termid":"MOD:01691"}


id: GO:0005898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-13; consists of two chains, interleukin-13 receptor alpha1 chain and interleukin-4 receptor alpha chain.","definition_xrefs":["PMID:8552669","PMID:9013879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-13 receptor complex","synonyms":[{"name":"IL-13 receptor complex","type":"exact"}],"termid":"GO:0005898"}


id: PBO:0003574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Switch One Like","termid":"PBO:0003574"}


id: GO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["PMID:15726494","PMID:15907921","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"}


id: GO:0061485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a memory T cell population by cell division.","definition_xrefs":["GOC:dph","PMID:14647273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell proliferation","termid":"GO:0061485"}


id: SO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the SP6 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP6_RNA_Polymerase_Promoter","synonyms":[{"name":"SP6 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001205"}


id: PBO:0079034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 3-1","termid":"PBO:0079034"}


id: MONDO:0003173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the brain stem.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain stem astrocytic neoplasm","secondary_identifiers":["DOID:4860","NCIT:C7445","SCTID:107581000119103","MEDGEN:231458","UMLS:C1332608"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of brainstem","type":"exact"},{"name":"brain stem astrocytoma","type":"exact"},{"name":"brainstem astrocytoma","type":"exact"},{"name":"brainstem astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003173","xrefs":{"Monarch":{"xref_id":"0003173"}}}


id: PBO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 16","termid":"PBO:0072139"}


id: PBO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenine_import","termid":"PBO:0030841"}


id: MONDO:0011955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, noninsulin-dependent, 4","secondary_identifiers":["MEDGEN:334578","UMLS:C1842642","OMIM:608036","MESH:C564299"],"synonyms":[{"name":"Niddm4","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent, 4","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, type 4","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus 4","type":"related"}],"termid":"MONDO:0011955","xrefs":{"Monarch":{"xref_id":"0011955"}}}


id: GO:1901516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspyridone A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone A metabolic process","synonyms":[{"name":"aspyridone A metabolism","type":"exact"}],"termid":"GO:1901516"}


id: PBO:0036287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch RNA-binding protein, involved in splicing (predicted)","termid":"PBO:0036287"}


id: PBO:0076076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatid perinuclear RNA binding protein","termid":"PBO:0076076"}


id: PBO:0091844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, heat shock specific","termid":"PBO:0091844"}


id: GO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0292"],"gene_count":0,"genotype_count":0,"name":"obsolete nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide (obsolete GO:0018416)","synonyms":[{"name":"nickel incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido bis-L-glutamato L-histidino nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018416"}


id: GO:0007380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the head segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"part_of","term_name":"head segmentation","termid":"GO:0035287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, head","termid":"GO:0007380"}


id: PBO:0004496
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.33","termid":"PBO:0004496"}


id: PATO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flavor quality inhering in a bearer by virtue of the bearer's having an acrid, sharp, or disagreeable flavor.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavourful","termid":"PATO:0001329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bitter","termid":"PATO:0002474"}


id: MOD:00902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-arginine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-arginine residue","synonyms":[{"name":"ModArg","type":"exact"}],"termid":"MOD:00902"}


id: GO:0140785
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an amino acid.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"amino acid sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid sensing activity","type":"exact"}],"termid":"GO:0140785","terms_by_termid":{"GO:0140786":null}}


id: PBO:0077423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B","termid":"PBO:0077423"}


id: PR:O94327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.10 gene.","definition_xrefs":["UniProtKB:O94327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.10","synonyms":[{"name":"Spom972h-SPBC725.10","type":"exact"}],"termid":"PR:O94327"}


id: PBO:0079836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor B","termid":"PBO:0079836"}


id: GO:1900367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:TermGenie","PMID:22474183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of defense response to insect","termid":"GO:2000068"},{"relation_name":"positively_regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response to insect","synonyms":[{"name":"activation of defense response to insect","type":"narrow"},{"name":"activation of physiological defense response to insect","type":"narrow"},{"name":"positive regulation of physiological defense response to insect","type":"exact"},{"name":"up regulation of defense response to insect","type":"exact"},{"name":"up regulation of physiological defense response to insect","type":"exact"},{"name":"up-regulation of defense response to insect","type":"exact"},{"name":"up-regulation of physiological defense response to insect","type":"exact"},{"name":"upregulation of defense response to insect","type":"exact"},{"name":"upregulation of physiological defense response to insect","type":"exact"}],"termid":"GO:1900367"}


id: GO:0102772
data:
  {"annotated_genes":["SJAG_05311","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74281,93705],"is_not":false,"summary":null,"term":"GO:0102772"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.5","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:55808","MetaCyc:RXN-14250"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772","terms_by_termid":{"GO:0102772":null}}


id: GO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The resumption of the Saccharomyces mitotic cell division cycle by pheromone-arrested cells that have not mated.","definition_xrefs":["PMID:9927449","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces) (obsolete GO:0046615)","synonyms":[{"name":"re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046615"}


id: PBO:0029389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029389"}


id: PBO:0087497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; binds to microtubules via conserved alkaline residues; has two seven-bladed WD40 &#946; propellers; Elongator complex is required for modification of wobble nucleosides in tRNA; target of Kluyveromyces lactis zymocin","termid":"PBO:0087497"}


id: MONDO:0975705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"otofacial neurodevelopmental syndrome","secondary_identifiers":["UMLS:C5935642","OMIM:620910","MEDGEN:1857968"],"termid":"MONDO:0975705","xrefs":{"Monarch":{"xref_id":"0975705"}}}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: GO:0022600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:isa_complete","GOC:mtg_cardio","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive system process","termid":"GO:0022600"}


id: GO:2001033
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104312],"is_not":false,"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of double-strand break repair","termid":"GO:2000780"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of NHEJ","type":"exact"}],"termid":"GO:2001033","terms_by_termid":{"GO:2001033":null}}


id: GO:0097324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["GOC:uh","PMID:22637532","CL:0000148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte migration","termid":"GO:0097324"}


id: PBO:0053473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 442","termid":"PBO:0053473"}


id: PBO:0062804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 3","termid":"PBO:0062804"}


id: PBO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting (predicted)","termid":"PBO:0001498"}


id: PBO:0109379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 10","termid":"PBO:0109379"}


id: GO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung growth","termid":"GO:0060437"}


id: PBO:0076838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 5","termid":"PBO:0076838"}


id: PBO:0049002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1","termid":"PBO:0049002"}


id: MONDO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharoptosis-cleft palate-ectrodactyly-dental anomalies syndrome","secondary_identifiers":["Orphanet:1258"],"synonyms":[{"name":"Rodini-Richieri Costa syndrome","type":"exact"}],"termid":"MONDO:0015256","xrefs":{"Monarch":{"xref_id":"0015256"}}}


id: GO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file.","definition_xrefs":["PMID:21391814","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periclinal cell division","termid":"GO:0090511"}


id: PBO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 3","termid":"PBO:0046285"}


id: PBO:0075596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialophorin","termid":"PBO:0075596"}


id: PBO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 71 pseudogene","termid":"PBO:0070157"}


id: PBO:0080234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly factor VMA21","termid":"PBO:0080234"}


id: GO:0090625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated post-transcriptional gene silencing pathway in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), an siRNA will typically direct cleavage by base pairing with perfect or near-perfect complementarity to the target mRNA.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:15260970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"},{"relation_name":"is_a","term_name":"siRNA-mediated post-transcriptional gene silencing","termid":"GO:0140766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated gene silencing by mRNA destabilization","synonyms":[{"name":"gene silencing by mRNA cleavage","type":"broad"},{"name":"mRNA cleavage involved in gene silencing by siRNA","type":"exact"},{"name":"mRNA destabilization-mediated gene silencing by siRNA","type":"exact"}],"termid":"GO:0090625"}


id: MONDO:0013191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the INF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 5","secondary_identifiers":["MESH:C567687","OMIM:613237","GARD:15636","MEDGEN:413315","DOID:0111130","UMLS:C2750475"],"synonyms":[{"name":"FSGS5","type":"exact"},{"name":"INF2 focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 5","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in INF2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 5","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 5","type":"related"}],"termid":"MONDO:0013191","xrefs":{"Monarch":{"xref_id":"0013191"}}}


id: GO:0014702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium pumps and is devoted to calcium uptake. The free sarcoplasmic reticulum membrane consists of the longitudinal sarcoplasmic reticulum membrane and the non-junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0005789"],"is_obsolete":false,"name":"free sarcoplasmic reticulum membrane","termid":"GO:0014702"}


id: MONDO:0009396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, neonatal self-limited primary, with hypercalciuria","secondary_identifiers":["OMIM:239199","UMLS:C1855924","MEDGEN:344611","MESH:C565496"],"synonyms":[{"name":"hyperparathyroidism, neonatal self-limited primary, with hypercalciuria","type":"exact"}],"termid":"MONDO:0009396","xrefs":{"Monarch":{"xref_id":"0009396"}}}


id: PBO:0028757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028757"}


id: MONDO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the vagina. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C6373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal leiomyoma","secondary_identifiers":["UMLS:C1336939","DOID:125","MEDGEN:277859"],"synonyms":[{"name":"leiomyoma of the vagina","type":"exact"},{"name":"leiomyoma of vagina","type":"exact"},{"name":"vagina leiomyoma","type":"exact"},{"name":"vaginal leiomyoma","type":"exact"}],"termid":"MONDO:0001536","xrefs":{"Monarch":{"xref_id":"0001536"}}}


id: PBO:0077134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPIN pseudogene 1","termid":"PBO:0077134"}


id: PATO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's containing bone.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osseous","synonyms":[{"name":"bony","type":"exact"}],"termid":"PATO:0002126"}


id: GO:0045161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated ion channels become localized to distinct subcellular domains in the neuron. Specific targeting, clustering, and maintenance of these channels in their respective domains are essential to achieve high conduction velocities of action potential propagation.","definition_xrefs":["PMID:11456440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"neuronal ion channel clustering","termid":"GO:0045161"}


id: PBO:0005285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential for RNA Silencing","termid":"PBO:0005285"}


id: GO:0015901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cycloheximide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cycloheximide is an antibiotic produced by Streptomyces which interferes with protein synthesis in eukaryotes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cycloheximide transport","termid":"GO:0015901"}


id: GO:0071331
data:
  {"annotated_genes":["SJAG_03081","SJAG_00472","SJAG_04312","SJAG_02444","SJAG_04026","SJAG_01699","SJAG_00574","SJAG_01254","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108468,96123,111000,107872,111511,108818,117554,103793,118587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hexose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071331","terms_by_termid":{"GO:0010619":null}}


id: GO:1903886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:TermGenie","PMID:20054338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 20 production","termid":"GO:1903884"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"activation of C-C motif chemokine 20 production","type":"narrow"},{"name":"activation of CCL-20 production","type":"narrow"},{"name":"activation of CCL20 production","type":"narrow"},{"name":"activation of chemokine (C-C motif) ligand 20 production","type":"narrow"},{"name":"positive regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"positive regulation of CCL-20 production","type":"exact"},{"name":"positive regulation of CCL20 production","type":"exact"},{"name":"up regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up regulation of CCL-20 production","type":"exact"},{"name":"up regulation of CCL20 production","type":"exact"},{"name":"up regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"up-regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up-regulation of CCL-20 production","type":"exact"},{"name":"up-regulation of CCL20 production","type":"exact"},{"name":"up-regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"upregulation of C-C motif chemokine 20 production","type":"exact"},{"name":"upregulation of CCL-20 production","type":"exact"},{"name":"upregulation of CCL20 production","type":"exact"},{"name":"upregulation of chemokine (C-C motif) ligand 20 production","type":"exact"}],"termid":"GO:1903886"}


id: GO:0007129
data:
  {"annotated_genes":["SJAG_03698","SJAG_04143","SJAG_04950","SJAG_00727","SJAG_02286","SJAG_03926","SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80618,89624,109797,112547,113226],"is_not":false,"summary":null,"term":"GO:0007129"},{"annotations":[119091,91473],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase. Homologous chromosome pairing begins when the chromosome arms begin to pair from the clustered telomeres and ends when synaptonemal complex or linear element assembly is complete.","definition_xrefs":["PMID:31811152","PMID:22582262","PMID:23117617","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_02286":null,"SJAG_02606":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04143":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"homologous chromosome pairing at meiosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Synapsis"],"synonyms":[{"name":"chromosomal pairing","type":"related"},{"name":"chromosomal synapsis","type":"narrow"},{"name":"synapsis","type":"narrow"}],"termid":"GO:0007129","terms_by_termid":{"GO:0007129":null,"GO:0030999":null}}


id: PBO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.24","termid":"PBO:0001726"}


id: SO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoregulated","termid":"SO:0000471"}


id: GO:0019564
data:
  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90477],"is_not":false,"summary":null,"term":"GO:0019564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"aerobic glycerol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019565","MetaCyc:PWY0-381"],"synonyms":[{"name":"aerobic glycerol breakdown","type":"exact"},{"name":"aerobic glycerol catabolism","type":"exact"},{"name":"aerobic glycerol degradation","type":"exact"},{"name":"aerobic glycerol fermentation","type":"related"}],"termid":"GO:0019564","terms_by_termid":{"GO:0019564":null}}


id: MONDO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sphenoid sinus that typically lasts beyond eight weeks. It is caused by infections, allergies, and the presence of sinus polyps or a deviated septum. Signs and symptoms include headache, nasal discharge, swelling in the face, dizziness, and breathing difficulties.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphenoid sinusitis","termid":"MONDO:0005964"},{"relation_name":"is_a","term_name":"chronic rhinosinusitis","termid":"MONDO:0006031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic sphenoidal sinusitis","secondary_identifiers":["NCIT:C34480","UMLS:C0008712","ICD10CM:J32.3","ICD9:473.3","MEDGEN:3087","icd11.foundation:627227610","SCTID:38961000","DOID:10793"],"synonyms":[{"name":"chronic sphenoid sinusitis","type":"exact"},{"name":"sphenoid sinusitis, chronic","type":"exact"},{"name":"sphenoidal sinus-chr.","type":"exact"}],"termid":"MONDO:0001123","xrefs":{"Monarch":{"xref_id":"0001123"}}}


id: GO:0030112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A carbohydrate rich layer at the outermost periphery of a cell.","definition_xrefs":["ISBN:0815316208","GOC:krc","GOC:mlg","PMID:28876829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glycocalyx","secondary_identifiers":["Wikipedia:Glycocalyx"],"termid":"GO:0030112"}


id: GO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of a polarized epithelium are generated and organized. A polarized epithelium is an epithelium where the epithelial sheet is oriented with respect to the planar axis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a polarized epithelium","synonyms":[{"name":"epithelial polarization","type":"exact"}],"termid":"GO:0001738"}


id: PBO:0072041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 11","termid":"PBO:0072041"}


id: SO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes some but not all loss of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_partial_loss_of_function","synonyms":[{"name":"polypeptide partial loss of function","type":"exact"}],"termid":"SO:0001561"}


id: GO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chondroitin D-glucuronate = dermatan L-iduronate.","definition_xrefs":["EC:5.1.3.19","MetaCyc:CHONDROITIN-GLUCURONATE-5-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"chondroitin-glucuronate 5-epimerase activity","secondary_identifiers":["Reactome:R-HSA-2022052","RHEA:21084"],"synonyms":[{"name":"chondroitin D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"chondroitin-D-glucuronate 5-epimerase activity","type":"related"},{"name":"dermatan-sulfate 5-epimerase activity","type":"related"},{"name":"polyglucuronate 5-epimerase activity","type":"related"},{"name":"urunosyl C-5 epimerase activity","type":"related"}],"termid":"GO:0047757"}


id: PBO:0057944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3668","termid":"PBO:0057944"}


id: PBO:0041015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 2","termid":"PBO:0041015"}


id: MONDO:0859330
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87423],"is_not":false,"summary":null,"term":"MONDO:0859330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620154","UMLS:C5774268","MEDGEN:1824041"],"termid":"MONDO:0859330","terms_by_termid":{"MONDO:0859330":null},"xrefs":{"Monarch":{"xref_id":"0859330"}}}


id: PBO:0003134
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginosuccinicaciduria","termid":"PBO:0003134"}


id: MONDO:0041154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of neck of urinary bladder","secondary_identifiers":["SCTID:236644005","UMLS:C0403653","MEDGEN:588557"],"synonyms":[{"name":"functional disorder of bladder neck and sphincter mechanism","type":"exact"}],"termid":"MONDO:0041154","xrefs":{"Monarch":{"xref_id":"0041154"}}}


id: GO:0050918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher concentration of a chemical.","definition_xrefs":["GOC:isa_complete","GOC:bf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive chemotaxis","synonyms":[{"name":"chemoattraction","type":"exact"}],"termid":"GO:0050918"}


id: MONDO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign paroxysmal positional nystagmus (obsolete MONDO:0008656)","termid":"MONDO:0008656","xrefs":{"Monarch":{"xref_id":"0008656"}}}


id: PBO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.5.5","termid":"PBO:0005642"}


id: GO:0050438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanate + acetyl-CoA + H2O = (R)-2-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:23040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"2-ethylmalate synthase activity","secondary_identifiers":["MetaCyc:2-ETHYLMALATE-SYNTHASE-RXN","EC:2.3.3.6","KEGG_REACTION:R00998"],"synonyms":[{"name":"(R)-2-ethylmalate 2-oxobutanoyl-lyase (CoA-acetylating) activity","type":"related"},{"name":"2-ethylmalate-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"acetyl-CoA:2-oxobutanoate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"propylmalate synthase activity","type":"related"},{"name":"propylmalic synthase activity","type":"related"}],"termid":"GO:0050438"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: GO:0016498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuromedin K, the peptide Asp-Met-His-Asp-Phe-Phe-Val-Gly-Leu-Met to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuromedin K receptor activity","synonyms":[{"name":"neurokinin B receptor activity","type":"exact"}],"termid":"GO:0016498"}


id: GO:0036260
data:
  {"annotated_genes":["SJAG_04527","SJAG_03901","SJAG_04488","SJAG_04034","SJAG_01713","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[70225,109667,74109,77264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[104112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[60386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a cap structure is added to the 5' end of nascent RNA polymerase transcripts. Examples of RNA capping include 7-methyl-G caps found on all RNA polymerase II transcripts and nucleotide-containing cofactor caps, such as NAD(H) or FAD, found on bacterial trancripts.","definition_xrefs":["GOC:mah","GOC:krc","PMID:18775984","PMID:27383794","PMID:30353673","PMID:29681497","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04488":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0036260","terms_by_termid":{"GO:0006370":null,"GO:0036261":null,"GO:0106005":null,"GO:0106410":null}}


id: GO:0008029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pentraxin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pentraxin receptor activity","synonyms":[{"name":"pentaxin receptor","type":"exact"}],"termid":"GO:0008029"}


id: GO:0042577
data:
  {"annotated_genes":["SJAG_02763","SJAG_02356","SJAG_00920","SJAG_04986"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77880,78781,73134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008195"},{"annotations":[81874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00920":null,"SJAG_02356":null,"SJAG_02763":null,"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"lipid phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042577","terms_by_termid":{"GO:0008195":null,"GO:0042392":null}}


id: GO:0031157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","GOC:pg","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"regulation of aggregation during fruiting body biosynthesis","type":"related"},{"name":"regulation of aggregation during fruiting body formation","type":"related"}],"termid":"GO:0031157"}


id: PBO:0078948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 6-1","termid":"PBO:0078948"}


id: PR:O59800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor RBM22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04587","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.02c","secondary_identifiers":["UniProtKB:O59800"],"synonyms":[{"name":"Spom972h-RBM22","type":"exact"},{"name":"complexed with cdc5 protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59800"}


id: PBO:0029863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_morphology_during_mitosis","termid":"PBO:0029863"}


id: MONDO:0100324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of focal segmental glomerulosclerosis without identifiable etiology. Primary (idiopathic) FSGS has been associated with the presence of circulating permeability factors/cytokines, which cause foot process effacement and proteinuria.","definition_xrefs":["PMID:30335305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal segmental glomerulosclerosis","termid":"MONDO:0100313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary focal segmental glomerulosclerosis","secondary_identifiers":["MEDGEN:313617","UMLS:C1709661"],"termid":"MONDO:0100324","xrefs":{"Monarch":{"xref_id":"0100324"}}}


id: GO:0097575
data:
  {"annotated_genes":["SJAG_03011","SJAG_04522","SJAG_02392","SJAG_00596","SJAG_00030","SJAG_04509","SJAG_04947","SJAG_01925","SJAG_00028"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89750,97755,106605,109580,111410,116172,118193],"is_not":false,"summary":null,"term":"GO:0097575"},{"annotations":[102026,106484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["PMID:24146635","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00596":null,"SJAG_01925":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lateral cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097575","terms_by_termid":{"GO:0097575":null,"GO:1990463":null}}


id: GO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["EC:1.16.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete multicopper ferroxidase iron transport mediator activity (obsolete GO:0004323)","synonyms":[{"name":"multicopper ferroxidase iron transport mediator activity","type":"exact"}],"termid":"GO:0004323"}


id: PBO:0084503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein that localizes to chromosomes; prevents synapsis between nonhomologous chromosomes and ensures synapsis between homologs; forms complex with Mnd1p to promote homolog pairing and meiotic double-strand break repair; heterodimer of Hop2p-Mnd1p stimulates the Dmc1p-mediated strand invasion","termid":"PBO:0084503"}


id: MONDO:0018391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility with spermatogenesis disorder (obsolete MONDO:0018391)","secondary_identifiers":["Orphanet:399775"],"termid":"MONDO:0018391","xrefs":{"Monarch":{"xref_id":"0018391"}}}


id: PBO:0041279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 5","termid":"PBO:0041279"}


id: GO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a malonyl group (CO-CH2-CO) to peptidyl-lysine to form N6-malonyl-L-lysine.","definition_xrefs":["PMID:22076378","GOC:jsg","RESID:AA0568","GOC:sp","PMID:21908771"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine malonylation (obsolete GO:0036045)","synonyms":[{"name":"lysine malonylation","type":"exact"},{"name":"peptidyl-lysine malonylation","type":"exact"}],"termid":"GO:0036045"}


id: PBO:0027080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_during_glucose_starvation","termid":"PBO:0027080"}


id: MOD:01148
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a ubiquitin.","definition_xrefs":["PubMed:18688235","PubMed:11125103"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitinylated lysine","termid":"MOD:01148"}


id: PBO:0056766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 17","termid":"PBO:0056766"}


id: GO:0046410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + isochorismate = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate + pyruvate + CO2.","definition_xrefs":["PMID:1459959","EC:2.5.1.64"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity (obsolete GO:0046410)","synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","type":"exact"}],"termid":"GO:0046410"}


id: GO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.","definition_xrefs":["PMID:17572649","GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ossification","secondary_identifiers":["Wikipedia:Ossification"],"synonyms":[{"name":"bone biosynthesis","type":"exact"},{"name":"bone formation","type":"exact"},{"name":"osteogenesis","type":"exact"}],"termid":"GO:0001503"}


id: PBO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase","termid":"PBO:0004249"}


id: MONDO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"simple partial epilepsy","secondary_identifiers":["ICD9:345.51","DOID:5129"],"termid":"MONDO:0003290","xrefs":{"Monarch":{"xref_id":"0003290"}}}


id: GO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone, a peptide hormone that is secreted by the anterior pituitary or the placenta into the circulation, and binds to membrane receptors in target tissues to stimulate body growth.","definition_xrefs":["PMID:11445442","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"growth hormone activity","synonyms":[{"name":"GH activity","type":"exact"},{"name":"pituitary growth hormone activity","type":"narrow"},{"name":"placental growth hormone activity","type":"narrow"}],"termid":"GO:0070186"}


id: PBO:0068875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 115, pseudogene","termid":"PBO:0068875"}


id: MONDO:0032619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 14","secondary_identifiers":["MEDGEN:1648440","OMIM:618236","DOID:0112094","UMLS:C4748777","GARD:16322"],"synonyms":[{"name":"MC1DN14","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 14","type":"related"}],"termid":"MONDO:0032619","xrefs":{"Monarch":{"xref_id":"0032619"}}}


id: MONDO:0700265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the joints, bones, muscles, and/or connective tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic rheumatic syndrome","termid":"MONDO:0700265","xrefs":{"Monarch":{"xref_id":"0700265"}}}


id: PBO:0053963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1271","termid":"PBO:0053963"}


id: GO:0035861
data:
  {"annotated_genes":["SJAG_03680","SJAG_01677","SJAG_02990","SJAG_01680","SJAG_05196","SJAG_01849","SJAG_02616","SJAG_03898","SJAG_02200","SJAG_02575","SJAG_00399","SJAG_01486","SJAG_03722","SJAG_01698","SJAG_04190","SJAG_01410","SJAG_01419","SJAG_05372","SJAG_02771","SJAG_03906","SJAG_05012","SJAG_04239","SJAG_01429","SJAG_03615","SJAG_02521","SJAG_02079","SJAG_00640","SJAG_03026","SJAG_05239","SJAG_02294","SJAG_05373","SJAG_05295","SJAG_01644","SJAG_01533","SJAG_03923","SJAG_01648","SJAG_00727","SJAG_01708","SJAG_01832","SJAG_02545","SJAG_00757","SJAG_03855","SJAG_02072","SJAG_03454","SJAG_01573","SJAG_01205","SJAG_00250","SJAG_03780","SJAG_04816","SJAG_04142","SJAG_02098","SJAG_02828","SJAG_02460","SJAG_01605","SJAG_01076","SJAG_04183","SJAG_03941","SJAG_04791","SJAG_02708","SJAG_05232"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72894,73454,75999,77022,77043,78979,79756,80720,81183,90501,91038,91168,91471,92080,92164,93317,93426,94566,95551,95833,97920,98087,98436,98835,99041,99071,99341,100888,100979,101115,102519,102549,102581,102990,104765,104845,104903,105274,106003,106101,106171,106375,109630,109720,109766,111303,112814,113218,113507,113549,113725,114521,116301,118271,118537,118821,119231,119325,119747,120760],"is_not":false,"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["PMID:21035408","GOC:bf","GOC:vw","PMID:20096808","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of DNA damage","termid":"GO:0090734"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"site of double-strand break","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage foci","type":"related"},{"name":"DNA damage focus","type":"related"},{"name":"IRIF","type":"related"},{"name":"ionizing radiation-induced foci","type":"related"},{"name":"site of DSB","type":"exact"}],"termid":"GO:0035861","terms_by_termid":{"GO:0035861":null}}


id: GO:0016333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a follicular epithelium are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of follicular epithelium","termid":"GO:0016333"}


id: PBO:0066642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7A interacting MON1-CCZ1 complex subunit 1","termid":"PBO:0066642"}


id: PBO:0059164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal pentraxin 1 (pseudogene)","termid":"PBO:0059164"}


id: PATO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentrated","termid":"PATO:0001159"}


id: PBO:0044134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal binding protein 2","termid":"PBO:0044134"}


id: PBO:0017953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Pus7 (predicted)","termid":"PBO:0017953"}


id: MONDO:0700273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the RAD51C gene. Pathogenic germline variation in RAD51C confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including ovarian cancer, triple negative breast cancer and ER negative breast cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51C-related cancer predisposition","termid":"MONDO:0700273","xrefs":{"Monarch":{"xref_id":"0700273"}}}


id: PBO:0028536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028536"}


id: GO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host systemic acquired resistance (obsolete GO:0052104)","synonyms":[{"name":"activation by organism of SAR in host","type":"exact"},{"name":"activation by organism of systemic acquired resistance in host","type":"exact"},{"name":"induction by organism of SAR in host","type":"exact"},{"name":"induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host systemic acquired resistance","type":"related"},{"name":"positive regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"stimulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up-regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"upregulation by symbiont of systemic acquired resistance in host","type":"related"}],"termid":"GO:0052104"}


id: FYPO:0006588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is decreased, and some of the protein is present in the endoplasmic reticulum instead.","definition_xrefs":["PMID:29134248","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to shmoo tip membrane","termid":"FYPO:0006587"},{"relation_name":"is_a","term_name":"protein mislocalized to endoplasmic reticulum","termid":"FYPO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to shmoo tip membrane, with protein mislocalized to endoplasmic reticulum","synonyms":[{"name":"decreased protein localisation to mating projection tip membrane, with protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to mating projection tip membrane, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to plasma membrane at shmoo tip, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to shmoo membrane fusion domain, with protein mislocalized to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to shmoo projection membrane, with protein mislocalized to endoplasmic reticulum","type":"related"},{"name":"decreased protein localization to shmoo tip membrane, with protein mislocalized to ER","type":"exact"},{"name":"reduced protein localization to shmoo tip membrane, with protein mislocalized to endoplasmic reticulum","type":"related"}],"termid":"FYPO:0006588"}


id: MONDO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the frontal sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal sinus cancer","termid":"MONDO:0001756"},{"relation_name":"is_a","term_name":"paranasal sinus squamous cell carcinoma","termid":"MONDO:0044705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal sinus squamous cell carcinoma","secondary_identifiers":["UMLS:C1333646","SCTID:707356001","NCIT:C6067","DOID:2441","MEDGEN:272639"],"synonyms":[{"name":"epidermoid carcinoma of frontal sinus","type":"exact"},{"name":"epidermoid carcinoma of the frontal sinus","type":"exact"},{"name":"frontal sinus epidermoid carcinoma","type":"exact"},{"name":"frontal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of frontal sinus","type":"exact"},{"name":"squamous cell carcinoma of the frontal sinus","type":"exact"}],"termid":"MONDO:0002301","xrefs":{"Monarch":{"xref_id":"0002301"}}}


id: GO:2000315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"positive regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000315"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: MONDO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by higher than normal platelet counts in the peripheral blood.","direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytosis disease","secondary_identifiers":["UMLS:C0836924","MEDGEN:163397","MESH:D013922","DOID:2228","ICD9:289.9","NCIT:C35530","SCTID:6631009"],"synonyms":[{"name":"Platelet count increased","type":"exact"},{"name":"Thrombocythaemia","type":"exact"},{"name":"elevated Platelet count","type":"exact"},{"name":"thrombocytosis","type":"related"}],"termid":"MONDO:0002249","xrefs":{"Monarch":{"xref_id":"0002249"}}}


id: RO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p is causally upstream of q if and only if p precedes q and p and q are linked in a causal chain","direct_ancestors":[{"relation_name":"is_a","term_name":"precedes","termid":"BFO:0000063"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"RO:0002418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of","termid":"RO:0002411"}


id: GO:1990199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ATP-binding cassette (ABC) transporter complex made up of a dimer of MsbA. Facilitates the export across the plasma membrane of, amongst others, lipid A and lipopolysaccharide. In contrast to most ABC transporter complexes, each chain of the homodimer contains both the transmembrane domain (TMD) and the cytoplasmic ATP-binding domain (NBD).","definition_xrefs":["GOC:bhm","PMID:18024585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"MsbA transporter complex","synonyms":[{"name":"MsbA complex","type":"exact"},{"name":"MsbA dimer","type":"exact"}],"termid":"GO:1990199"}


id: PBO:0056082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 9","termid":"PBO:0056082"}


id: PBO:0069134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 384, pseudogene","termid":"PBO:0069134"}


id: GO:1904471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelin production.","definition_xrefs":["PMID:15560120","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of endothelin production","termid":"GO:1904470"},{"relation_name":"negatively_regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelin production","synonyms":[{"name":"down regulation of EDN1 secretion","type":"narrow"},{"name":"down regulation of EDN2 secretion","type":"narrow"},{"name":"down regulation of EDN3 secretion","type":"narrow"},{"name":"down regulation of endothelin secretion","type":"exact"},{"name":"down regulation of endothelin-1 secretion","type":"narrow"},{"name":"down regulation of endothelin-2 secretion","type":"narrow"},{"name":"down regulation of endothelin-3 secretion","type":"narrow"},{"name":"down-regulation of EDN1 secretion","type":"narrow"},{"name":"down-regulation of EDN2 secretion","type":"narrow"},{"name":"down-regulation of EDN3 secretion","type":"narrow"},{"name":"down-regulation of endothelin secretion","type":"exact"},{"name":"down-regulation of endothelin-1 secretion","type":"narrow"},{"name":"down-regulation of endothelin-2 secretion","type":"narrow"},{"name":"down-regulation of endothelin-3 secretion","type":"narrow"},{"name":"downregulation of EDN1 secretion","type":"narrow"},{"name":"downregulation of EDN2 secretion","type":"narrow"},{"name":"downregulation of EDN3 secretion","type":"narrow"},{"name":"downregulation of endothelin secretion","type":"exact"},{"name":"downregulation of endothelin-1 secretion","type":"narrow"},{"name":"downregulation of endothelin-2 secretion","type":"narrow"},{"name":"downregulation of endothelin-3 secretion","type":"narrow"},{"name":"inhibition of EDN1 secretion","type":"narrow"},{"name":"inhibition of EDN2 secretion","type":"narrow"},{"name":"inhibition of EDN3 secretion","type":"narrow"},{"name":"inhibition of endothelin secretion","type":"narrow"},{"name":"inhibition of endothelin-1 secretion","type":"narrow"},{"name":"inhibition of endothelin-2 secretion","type":"narrow"},{"name":"inhibition of endothelin-3 secretion","type":"narrow"},{"name":"negative regulation of EDN1 secretion","type":"narrow"},{"name":"negative regulation of EDN2 secretion","type":"narrow"},{"name":"negative regulation of EDN3 secretion","type":"narrow"},{"name":"negative regulation of endothelin secretion","type":"narrow"},{"name":"negative regulation of endothelin-1 secretion","type":"narrow"},{"name":"negative regulation of endothelin-2 secretion","type":"narrow"},{"name":"negative regulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904471"}


id: GO:0047903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose + NADP+ = 5-dehydro-D-fructose + NADPH.","definition_xrefs":["MetaCyc:FRUCTOSE-5-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fructose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:14069"],"synonyms":[{"name":"5-keto-D-fructose reductase (NADP+)","type":"related"},{"name":"5-ketofructose reductase (NADP(+)) activity","type":"related"},{"name":"5-ketofructose reductase (NADP)","type":"related"},{"name":"5-ketofructose reductase (NADP+) activity","type":"related"},{"name":"D-(-)fructose:(NADP+) 5-oxidoreductase activity","type":"related"},{"name":"D-fructose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"fructose 5-(nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0047903"}


id: PBO:0072503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 32","termid":"PBO:0072503"}


id: GO:0050656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3'-phosphoadenosine 5'-phosphosulfate (PAPS), a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate binding","synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulphate binding","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate binding","type":"exact"},{"name":"PAPS binding","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate binding","type":"exact"},{"name":"phosphoadenosine phosphosulfate binding","type":"exact"}],"termid":"GO:0050656"}


id: PBO:0002678
data:
  {"annotated_genes":["SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56271],"is_not":false,"summary":null,"term":"PBO:0002678"}]},"cv_name":"EC numbers","gene_count":1,"genes_by_uniquename":{"SJAG_MIT03":null},"genotype_count":0,"is_obsolete":false,"name":"1.10.2.2","termid":"PBO:0002678","terms_by_termid":{"PBO:0002678":null}}


id: GO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"},{"relation_name":"positively_regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of non-professional antigen presenting cell antigen processing and presentation","synonyms":[{"name":"activation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"upregulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002621"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: PBO:0073176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein H","termid":"PBO:0073176"}


id: FYPO:0002897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"decreased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002897"}


id: MONDO:0017973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital lipoid adrenal hyperplasia due to STAR deficency","termid":"MONDO:0008725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005047","MONDO:0005066"],"is_obsolete":false,"name":"non-classic congenital lipoid adrenal hyperplasia due to STAR deficency","secondary_identifiers":["GARD:21474","UMLS:C5680948","Orphanet:325529","MEDGEN:1842170"],"termid":"MONDO:0017973","xrefs":{"Monarch":{"xref_id":"0017973"}}}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: PBO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase (predicted)","termid":"PBO:0001739"}


id: MONDO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe neurodevelopmental disorder affecting the central nervous system.","definition_xrefs":["Orphanet:778"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete motor stereotypies (obsolete MONDO:0017656)","termid":"MONDO:0017656"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Rett syndrome","secondary_identifiers":["DOID:1206","icd11.foundation:201200685","GARD:5696","MESH:D015518","OMIM:312750","NORD:1666","MedDRA:10039000","SCTID:68618008","NANDO:2100219","NCIT:C75488","UMLS:C0035372","ICD9:330.8","NANDO:1200604","MEDGEN:48441","NANDO:1200603","NANDO:2200825"],"synonyms":[{"name":"RTS","type":"exact"},{"name":"RTT","type":"exact"},{"name":"Rett syndrome","type":"exact"},{"name":"Rett syndrome, X-linked dominant","type":"exact"},{"name":"Rett syndrome, Zappella variant","type":"related"},{"name":"Rett syndrome, atypical","type":"related"},{"name":"Rett syndrome, atypical, X-linked dominant","type":"exact"},{"name":"Rett syndrome, preserved speech variant","type":"related"},{"name":"Rett syndrome, preserved speech variant, X-linked dominant","type":"exact"},{"name":"Rett's disorder","type":"exact"},{"name":"Rett’s disease","type":"exact"},{"name":"autism, dementia, ataxia, and loss of purposeful hand use","type":"related"},{"name":"cerebroatrophic hyperammonemia","type":"exact"}],"termid":"MONDO:0010726","xrefs":{"Monarch":{"xref_id":"0010726"}}}


id: GO:0016798
data:
  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of the hydrolysis of any glycosyl bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase 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activity, acting on glycosyl bonds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2065233","Reactome:R-HSA-1793176","EC:3.2.-.-"],"synonyms":[{"name":"N-glycosylase","type":"narrow"},{"name":"glycosidase 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id: PBO:0077307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM44 antisense RNA 2","termid":"PBO:0077307"}


id: PBO:0039579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1","termid":"PBO:0039579"}


id: PBO:0057776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2355","termid":"PBO:0057776"}


id: PBO:0076048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 2","termid":"PBO:0076048"}


id: MONDO:0044919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the renal pelvis.","definition_xrefs":["NCIT:C7525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"renal pelvis neoplasm","termid":"MONDO:0003719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"malignant renal pelvis neoplasm","secondary_identifiers":["MEDGEN:57793","UMLS:C0153618"],"synonyms":[{"name":"cancer of renal pelvis","type":"exact"},{"name":"malignant neoplasm of renal pelvis","type":"exact"},{"name":"malignant neoplasm of the renal pelvis","type":"exact"},{"name":"malignant renal pelvis neoplasm","type":"exact"},{"name":"malignant renal pelvis tumor","type":"exact"},{"name":"malignant renal pelvis tumour","type":"exact"},{"name":"malignant tumor of renal pelvis","type":"exact"},{"name":"malignant tumor of the renal pelvis","type":"exact"},{"name":"malignant tumour of renal pelvis","type":"exact"},{"name":"malignant tumour of the renal pelvis","type":"exact"},{"name":"renal pelvis cancer","type":"exact"}],"termid":"MONDO:0044919","xrefs":{"Monarch":{"xref_id":"0044919"}}}


id: PBO:0049713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 1","termid":"PBO:0049713"}


id: PBO:0064571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 3","termid":"PBO:0064571"}


id: GO:0052319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phytoalexin biosynthetic process (obsolete GO:0052319)","synonyms":[{"name":"regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052319"}


id: PBO:0054415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1811","termid":"PBO:0054415"}


id: GO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"positively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development","termid":"GO:0061063"}


id: PBO:0083662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3","termid":"PBO:0083662"}


id: PBO:0088129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved with Npc2p in sterol trafficking; transits through the biosynthetic vacuolar protein sorting pathway, involved in sphingolipid metabolism; cells lacking Ncr1p exhibit high levels of long chain bases (LCB), similar to the accumulation of high amounts of lipids observed in patients with Neimann-Pick C, a disease caused by loss-of-function mutations in NPC1, the functional ortholog of Ncr1p","termid":"PBO:0088129"}


id: FYPO:0006786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing manganese ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on manganese","synonyms":[{"name":"normal cell population growth in presence of manganese","type":"exact"},{"name":"normal cell population growth on manganese","type":"exact"},{"name":"normal cell population growth on manganese ion","type":"exact"},{"name":"normal cellular response to manganese","type":"related"},{"name":"normal growth on manganese ions","type":"exact"},{"name":"normal vegetative cell population growth on manganese","type":"exact"}],"termid":"FYPO:0006786"}


id: GO:0033217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to iron ion starvation (obsolete GO:0033217)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to iron deficiency","type":"exact"}],"termid":"GO:0033217"}


id: MONDO:0003287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the central nervous system. It is characterized by the presence of intersecting fascicles composed of spindle cells that often lack mitotic activity.","definition_xrefs":["NCIT:C6998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system leiomyoma","secondary_identifiers":["DOID:5126","MEDGEN:232695","UMLS:C1334382"],"synonyms":[{"name":"central nervous system leiomyoma","type":"exact"},{"name":"leiomyoma of CNS","type":"exact"},{"name":"leiomyoma of central nervous system","type":"exact"},{"name":"leiomyoma of the CNS","type":"exact"},{"name":"leiomyoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003287","xrefs":{"Monarch":{"xref_id":"0003287"}}}


id: PBO:0053032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 5","termid":"PBO:0053032"}


id: PBO:0013442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosomal protein Rsm22 fusion protein","termid":"PBO:0013442"}


id: PBO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 172 pseudogene","termid":"PBO:0070234"}


id: PBO:0062161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 2","termid":"PBO:0062161"}


id: PBO:0059224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 6","termid":"PBO:0059224"}


id: PBO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1","termid":"PBO:0043180"}


id: PBO:0074024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 2","termid":"PBO:0074024"}


id: PBO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 4","termid":"PBO:0052531"}


id: MONDO:0014595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SIK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 30","secondary_identifiers":["UMLS:C4225360","OMIM:616341","MEDGEN:898954","GARD:16093","DOID:0080465"],"synonyms":[{"name":"DEE30","type":"exact"},{"name":"EIEE30","type":"exact"},{"name":"SIK1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 30","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SIK1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 30","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 30","type":"exact"}],"termid":"MONDO:0014595","xrefs":{"Monarch":{"xref_id":"0014595"}}}


id: GO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:yaf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"negatively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney development","synonyms":[{"name":"negative regulation of nephrogenesis","type":"related"}],"termid":"GO:0090185"}


id: GO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion development","synonyms":[{"name":"trigeminal ganglia development","type":"related"}],"termid":"GO:0061551"}


id: PBO:0053397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 327","termid":"PBO:0053397"}


id: PBO:0067827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 129","termid":"PBO:0067827"}


id: FYPO:0006658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is decreased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased acid phosphatase activity","termid":"FYPO:0001045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"reduced acid phosphatase activity during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006658"}


id: GO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont-induced cellular transformation resulting in immortalized cells, or cells capable of indefinite replication. Usually mediated by viruses.","definition_xrefs":["PMID:18366075","PMID:11119620","ISBN:0781702534","PMID:24373315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated transformation of host cell","secondary_identifiers":["GO:0020021","Wikipedia:Viral_transformation","GO:0019088"],"synonyms":[{"name":"host cell immortalization","type":"exact"},{"name":"host cell transformation","type":"exact"},{"name":"immortalization of host cell","type":"exact"},{"name":"immortalization of host cell by virus","type":"related"},{"name":"transformation of host cell","type":"exact"},{"name":"transformation of host cell by virus","type":"exact"},{"name":"viral immortalization","type":"exact"},{"name":"viral transformation","type":"exact"},{"name":"viral transformation of host cell","type":"exact"},{"name":"virus-mediated transformation of host cell","type":"related"}],"termid":"GO:0019087"}


id: MONDO:0016329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial syndrome associated with hypertrophic cardiomyopathy (obsolete MONDO:0016329)","termid":"MONDO:0016329","xrefs":{"Monarch":{"xref_id":"0016329"}}}


id: PBO:0083707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-luminal alpha 1,3 glucosyltransferase; involved in transfer of oligosaccharides from dolichyl pyrophosphate to asparagine residues of proteins during N-linked protein glycosylation; C998T transition in human ortholog ALG6 causes carbohydrate-deficient glycoprotein syndrome type-Ic; wild-type human ortholog ALG6 can partially complement yeast alg6 mutant","termid":"PBO:0083707"}


