# terms

id: PBO:0011426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0011426"}


id: GO:0030478
data:
  {"annotated_genes":["SJAG_04624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91242],"is_not":false,"summary":null,"term":"GO:0030478"}]},"cv_name":"cellular_component","definition":"Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah","PMID:21494665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0015629","GO:0005737"],"is_obsolete":false,"name":"actin cap","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000143"],"termid":"GO:0030478","terms_by_termid":{"GO:0030478":null}}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: PBO:0082201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 1,2-mannosyltransferase; involved in glycosyl phosphatidyl inositol (GPI) biosynthesis; required for addition of the fourth, side branching mannose to the GPI core structure","termid":"PBO:0082201"}


id: FYPO:0005610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to a smaller portion of the chromosome than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of protein localization to double-strand break site","synonyms":[{"name":"decreased spatial extent of protein localisation to double-strand break site","type":"exact"},{"name":"decreased spatial extent of protein localization to DSB","type":"exact"},{"name":"decreased spatial extent of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of protein localization to site of double-strand break","type":"exact"},{"name":"reduced spatial extent of protein localization to double-strand break","type":"exact"}],"termid":"FYPO:0005610"}


id: MONDO:0958203
data:
  {"annotated_genes":["SJAG_03747"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87949],"is_not":false,"summary":null,"term":"MONDO:0958203"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 74","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1845603","UMLS:C5882749","OMIM:620688"],"termid":"MONDO:0958203","terms_by_termid":{"MONDO:0958203":null},"xrefs":{"Monarch":{"xref_id":"0958203"}}}


id: MONDO:0014526
data:
  {"annotated_genes":["SJAG_03149","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88573,88574],"is_not":false,"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","definition":"Any polyglucosan body myopathy in which the cause of the disease is a mutation in the GYG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyglucosan body myopathy","termid":"MONDO:0000192"},{"relation_name":"is_a","term_name":"GYG1-related disorder of glycogen metabolism","termid":"MONDO:0100314"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"polyglucosan body myopathy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015452","OMIM:616199","Orphanet:456369","GARD:17793","MEDGEN:863889"],"synonyms":[{"name":"GYG1 polyglucosan body myopathy","type":"exact"},{"name":"PGBM2","type":"related"},{"name":"polyglucosan body myopathy 2","type":"related"},{"name":"polyglucosan body myopathy caused by mutation in GYG1","type":"exact"},{"name":"polyglucosan body myopathy type 2","type":"exact"}],"termid":"MONDO:0014526","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0014526"}}}


id: MOD:00064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-acetyl-L-lysine.","definition_xrefs":["DeltaMass:214","PubMed:11999733","OMSSA:24","PubMed:14730666","PubMed:15350136","ChEBI:17752","PubMed:11369851","PubMed:1680872","PubMed:670159","PubMed:11857757","RESID:AA0055","Unimod:1#K","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated L-lysine","termid":"MOD:00723"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:00408","MOD:01875"],"is_obsolete":false,"name":"N6-acetyl-L-lysine","synonyms":[{"name":"(2S)-6-acetamido-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylamino-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylazanyl-2-aminohexanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N6-acetyllysine","type":"exact"},{"name":"N(zeta)-acetyllysine","type":"exact"},{"name":"N6-acetyl-L-lysine","type":"exact"},{"name":"N6-acetylated L-lysine","type":"exact"},{"name":"N6AcLys","type":"exact"},{"name":"acetylk","type":"exact"},{"name":"epsilon-acetyllysine","type":"exact"}],"termid":"MOD:00064"}


id: PBO:0085872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication","termid":"PBO:0085872"}


id: MONDO:1011705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined deficiency of factors VIII, IX, and X, non-human animal","secondary_identifiers":["OMIA:001983"],"termid":"MONDO:1011705","xrefs":{"Monarch":{"xref_id":"1011705"}}}


id: FYECO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where DHA (dihydroxyacetone) is the main carbon source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHA minimal medium","synonyms":[{"name":"DHA MM","type":"exact"},{"name":"dihydroxyacetone MM","type":"exact"},{"name":"dihydroxyactone minimal medium","type":"exact"}],"termid":"FYECO:0000073"}


id: GO:0050917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of umami taste","synonyms":[{"name":"umami taste perception","type":"exact"}],"termid":"GO:0050917"}


id: MONDO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral palsy (obsolete MONDO:0002160)","termid":"MONDO:0002160","xrefs":{"Monarch":{"xref_id":"0002160"}}}


id: PBO:0066063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor like 1","termid":"PBO:0066063"}


id: GO:0051397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of basic amino acid residues at the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal basic amino acid aminopeptidase activity (obsolete GO:0051397)","synonyms":[{"name":"N-terminal basic amino acid aminopeptidase activity","type":"exact"}],"termid":"GO:0051397"}


id: PBO:0066530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 5","termid":"PBO:0066530"}


id: PBO:0074089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 5","termid":"PBO:0074089"}


id: PBO:0082784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import of all mitochondrially directed proteins; involved in transfer of precursors from the Tom70p and Tom20p receptors to the Tom40p pore","termid":"PBO:0082784"}


id: MONDO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of a glandular component exhibiting architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical atypical polypoid adenomyoma","secondary_identifiers":["UMLS:C1516409","MEDGEN:273123","DOID:8179","NCIT:C40234"],"termid":"MONDO:0004488","xrefs":{"Monarch":{"xref_id":"0004488"}}}


id: PBO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 12","termid":"PBO:0070904"}


id: GO:0033178
data:
  {"annotated_genes":["SJAG_01447","SJAG_00212","SJAG_01817","SJAG_04955","SJAG_00136","SJAG_01471","SJAG_01397","SJAG_04015"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98535,72974,111862,61019,104616,100840,120775,89901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null}}


id: PBO:0054569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1971","termid":"PBO:0054569"}


id: MONDO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute encephalopathy with biphasic seizures and late reduced diffusion (AESD) is a rare childhood-onset epilepsy syndrome associated with infection and characterized by a biphasic clinical course. The initial symptom is a prolonged febrile seizure on day 1 (the first phase). Afterwards, patients have variable levels of consciousness from normal to coma. Irrespective of the consciousness levels, magnetic resonance imaging (MRI) during the first 2 days shows no abnormality. During the second phase (usually days 4 - 6), patients show a cluster of seizures and deterioration of consciousness. Diffusion-weighted images (DWI) on MRI reveal the brain lesions with reduced diffusion predominantly in the subcortical white matter. After the second acute phase, consciousness levels improve with the emerging focal neurological signs. Neurological outcomes of AESD vary from normal to mild or severe sequelae including cerebral atrophy, mental retardation, paralysis and epilepsy.","definition_xrefs":["Orphanet:363549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"acute encephalopathy with biphasic seizures and late reduced diffusion","secondary_identifiers":["NANDO:2200901","UMLS:C4707658","NANDO:1200552","GARD:21552","SCTID:766044005","MEDGEN:1645136","NANDO:2100247"],"synonyms":[{"name":"AESD","type":"exact"},{"name":"AIEF","type":"exact"},{"name":"acute infantile encephalopathy predominantly affecting the frontal lobes","type":"exact"}],"termid":"MONDO:0018198","xrefs":{"Monarch":{"xref_id":"0018198"}}}


id: FYPO:0004006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to menadione is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during cellular response to menadione","synonyms":[{"name":"normal protein accumulation during cellular response to menadione","type":"related"},{"name":"normal protein level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to menadione during vegetative growth","type":"exact"}],"termid":"FYPO:0004006"}


id: GO:0034714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type III transforming growth factor beta receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type III transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta type III binding","type":"exact"},{"name":"betaglycan binding","type":"related"},{"name":"transforming growth factor beta ligand binding to type III receptor","type":"related"},{"name":"transforming growth factor beta receptor type III binding","type":"exact"},{"name":"type IIII TGF-beta binding","type":"exact"}],"termid":"GO:0034714"}


id: PBO:0028555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_import_into_nucleus","termid":"PBO:0028555"}


id: PBO:0085703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA and ribosome biogenesis; activated in stochastic pulses of nuclear localization; binds polymerase A and C motif; subunit of the RPD3L histone deacetylase complex; has chromatin specific SANT domain; involved in telomeric gene silencing and filamentation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085703"}


id: PBO:0041825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0041825"}


id: PBO:0072162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 39","termid":"PBO:0072162"}


id: PBO:0089407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, membrane-tethered","termid":"PBO:0089407"}


id: MONDO:0957248
data:
  {"annotated_genes":["SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88393,88394],"is_not":false,"summary":null,"term":"MONDO:0957248"}]},"cv_name":"mondo","definition":"Any developmental and epileptic encephalopathy in which the cause of the disease is a homozygous mutation in the DNM1 gene.","definition_xrefs":["OMIM:620352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNM1-encephalopathy and neurodevelopmental disorder","termid":"MONDO:0700339"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 31B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070376","UMLS:C5830459","MEDGEN:1841095"],"synonyms":[{"name":"DEE31B","type":"exact"},{"name":"DNM1-encephalopathy and neurodevelopmental disorder","type":"broad"},{"name":"developmental and epileptic encephalopathy 31B, autosomal recessive","type":"exact"}],"termid":"MONDO:0957248","terms_by_termid":{"MONDO:0957248":null},"xrefs":{"Monarch":{"xref_id":"0957248"}}}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119241],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity glucose:proton symporter activity","type":"exact"},{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: GO:1904778
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"positively_regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localisation to cell cortex","type":"narrow"},{"name":"activation of protein localization to cell cortex","type":"narrow"},{"name":"positive regulation of protein localisation to cell cortex","type":"exact"},{"name":"up regulation of protein localisation to cell cortex","type":"exact"},{"name":"up regulation of protein localization to cell cortex","type":"exact"},{"name":"up-regulation of protein localisation to cell cortex","type":"exact"},{"name":"up-regulation of protein localization to cell cortex","type":"exact"},{"name":"upregulation of protein localisation to cell cortex","type":"exact"},{"name":"upregulation of protein localization to cell cortex","type":"exact"}],"termid":"GO:1904778","terms_by_termid":{"GO:0120047":null}}


id: PATO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male","termid":"PATO:0000384"}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN","EC:1.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: GO:0007006
data:
  {"annotated_genes":["SJAG_02524","SJAG_02398","SJAG_02797","SJAG_03700","SJAG_01640","SJAG_00168","SJAG_00687","SJAG_01120","SJAG_01949","SJAG_04208","SJAG_00230","SJAG_03282","SJAG_03633","SJAG_01470","SJAG_04370","SJAG_04965","SJAG_06468","SJAG_02656","SJAG_05302","SJAG_01917","SJAG_03710","SJAG_02501","SJAG_04317","SJAG_02034","SJAG_01951","SJAG_03416","SJAG_02002","SJAG_00404","SJAG_03563","SJAG_04996","SJAG_00569","SJAG_02355","SJAG_01780","SJAG_02361","SJAG_05241","SJAG_03502","SJAG_05300","SJAG_01305","SJAG_02028","SJAG_01405","SJAG_03515","SJAG_00576","SJAG_04237","SJAG_06440","SJAG_05268","SJAG_03168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94934,98544,103224,104159,106340,107816,108178,109497,109622,111502,115028,119881],"is_not":false,"summary":null,"term":"GO:0007006"},{"annotations":[91375,109293,103648,76828,80783,80407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[77299,94377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007007"},{"annotations":[106871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[71701,59048],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[59349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007008"},{"annotations":[79563,109541,104872,77483,75199,75745,90528,109565,115206,58405,118289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[76246,80332,58530,80393,80074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[71702,113794,78383,112039,100506,100155,109542,112392,59047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrial membrane, either of the lipid bilayer surrounding a mitochondrion.","definition_xrefs":["GOC:dph","GOC:jl","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00230":null,"SJAG_00404":null,"SJAG_00569":null,"SJAG_00576":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01305":null,"SJAG_01405":null,"SJAG_01470":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_02797":null,"SJAG_03168":null,"SJAG_03282":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03563":null,"SJAG_03633":null,"SJAG_03700":null,"SJAG_03710":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04317":null,"SJAG_04370":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05268":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06440":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mitochondrial membrane organisation","type":"exact"},{"name":"mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007006","terms_by_termid":{"GO:0007006":null,"GO:0007007":null,"GO:0007008":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:0045040":null,"GO:0070096":null,"GO:1990627":null}}


id: GO:0016651
data:
  {"annotated_genes":["SJAG_05033","SJAG_04152","SJAG_04397","SJAG_02016","SJAG_02697","SJAG_04270","SJAG_02191","SJAG_05015","SJAG_03098","SJAG_02794","SJAG_00235","SJAG_01539","SJAG_01869","SJAG_03476","SJAG_02154","SJAG_00972","SJAG_02395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65740,78863,97022,97023],"is_not":false,"summary":null,"term":"GO:0016651"},{"annotations":[79444,79814,60004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004128"},{"annotations":[80237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003955"},{"annotations":[98644,114867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050136"},{"annotations":[65971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003959"},{"annotations":[79009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003958"},{"annotations":[76156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003960"},{"annotations":[69518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016652"},{"annotations":[81835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016653"},{"annotations":[80966,81058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050664"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00972":null,"SJAG_01539":null,"SJAG_01869":null,"SJAG_02016":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02395":null,"SJAG_02697":null,"SJAG_02794":null,"SJAG_03098":null,"SJAG_03476":null,"SJAG_04152":null,"SJAG_04270":null,"SJAG_04397":null,"SJAG_05015":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-109343","EC:1.6.-.-","Reactome:R-HSA-8956458"],"synonyms":[{"name":"NAD(P)H dehydrogenase","type":"narrow"},{"name":"oxidoreductase activity, acting on NADH or NADPH","type":"related"},{"name":"oxidoreductase activity, acting on NADH or NADPH, other acceptor","type":"narrow"}],"termid":"GO:0016651","terms_by_termid":{"GO:0003955":null,"GO:0003958":null,"GO:0003959":null,"GO:0003960":null,"GO:0004128":null,"GO:0016651":null,"GO:0016652":null,"GO:0016653":null,"GO:0050136":null,"GO:0050664":null}}


id: PBO:0117404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly factor VMA22","termid":"PBO:0117404"}


id: PR:P50520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 3-kinase catalytic subunit type 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01959","PRO:DNx","PANTHER:PTHR10048:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase vps34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.05","secondary_identifiers":["UniProtKB:P50520"],"synonyms":[{"name":"PI3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase vps34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIK3C3","type":"exact"},{"name":"vacuolar protein sorting-associated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50520"}


id: GO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polyadenylation of viral mRNA through a polymerase stuttering mechanism. The stop signal present at the end of each gene comprises a stretch of uridine on which the viral polymerase acquires a stuttering behavior: after each adenine inserted, the polymerase moves back one nucleotide along with the mRNA. It resumes transcription adding a new adenine, then again moves back, thereby producing a polyA tail.","definition_xrefs":["VZ:1916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation of viral mRNA by polymerase stuttering","synonyms":[{"name":"polyA stuttering","type":"exact"}],"termid":"GO:0039698"}


id: GO:1903453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any RNA interference that is involved in olfactory learning.","definition_xrefs":["PMID:23993094","GOC:kmv","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA interference involved in olfactory learning (obsolete GO:1903453)","synonyms":[{"name":"RNAi involved in olfactory learning","type":"exact"},{"name":"posttranscriptional gene silencing by siRNA involved in olfactory learning","type":"exact"}],"termid":"GO:1903453"}


id: _global:processed_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Inverse of processed_into.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_from","termid":"_global:processed_from"}


id: GO:1900057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leaf senescence.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of leaf senescence","termid":"GO:1900055"},{"relation_name":"positively_regulates","term_name":"leaf senescence","termid":"GO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaf senescence","synonyms":[{"name":"activation of leaf senescence","type":"related"},{"name":"up regulation of leaf senescence","type":"related"},{"name":"up-regulation of leaf senescence","type":"related"},{"name":"upregulation of leaf senescence","type":"related"}],"termid":"GO:1900057"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: GO:2000807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle clustering.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"synaptic vesicle clustering","termid":"GO:0097091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle clustering","termid":"GO:2000807"}


id: MONDO:0700070
data:
  {"annotated_genes":["SJAG_04316","SJAG_01491","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87685,87687,87686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[88510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the POMT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"myopathy caused by variation in POMT1","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"POMT1 myopathy","type":"exact"},{"name":"POMT1-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in POMT1","type":"exact"}],"termid":"MONDO:0700070","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013159":null},"xrefs":{"Monarch":{"xref_id":"0700070"}}}


id: PBO:0054801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2214","termid":"PBO:0054801"}


id: PBO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 2","termid":"PBO:0045984"}


id: GO:0044359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of proteins in a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of molecular function in another organism (obsolete GO:0044359)","synonyms":[{"name":"modulation of molecular function in other organism","type":"exact"}],"termid":"GO:0044359"}


id: PBO:0029537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002185)","termid":"PBO:0029537"}


id: PBO:0027069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport","termid":"PBO:0027069"}


id: PBO:0082080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' exoribonuclease required for 5' end processing of pre-60S rRNA; binds late pre-60S ribosomes, accompanying them from nucleolus to nuclear periphery; required for cell viability under standard (aerobic) conditions but not under anaerobic conditions; yeast null mutant is complemented by expression of human homolog NOL12","termid":"PBO:0082080"}


id: PBO:0116586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B1 (gene/pseudogene)","termid":"PBO:0116586"}


id: PBO:0064981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME N-terminal like, pseudogene","termid":"PBO:0064981"}


id: GO:0140147
data:
  {"annotated_genes":["SJAG_01990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116362],"is_not":false,"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The directed movement of zinc ions from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMC:PMC203372","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140147","terms_by_termid":{"GO:0140147":null}}


id: GO:0047232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosyceramide + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0047232)","synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta1->6-acetylglucosaminyltransferase","type":"broad"}],"termid":"GO:0047232"}


id: GO:1905460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:26493107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell apoptotic process","termid":"GO:0034392"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of VSMC apoptosis","type":"narrow"},{"name":"down regulation of VSMC apoptotic process","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of VSMC apoptosis","type":"narrow"},{"name":"down-regulation of VSMC apoptotic process","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of VSMC apoptosis","type":"narrow"},{"name":"downregulation of VSMC apoptotic process","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"inhibition of VSMC apoptosis","type":"narrow"},{"name":"inhibition of VSMC apoptotic process","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"negative regulation of VSMC apoptosis","type":"narrow"},{"name":"negative regulation of VSMC apoptotic process","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905460"}


id: PBO:0065050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 4","termid":"PBO:0065050"}


id: PBO:0048227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GADD45G interacting protein 1","termid":"PBO:0048227"}


id: GO:1903742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:25329901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"}


id: MONDO:1011431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, non-human animal","secondary_identifiers":["OMIA:000405"],"termid":"MONDO:1011431","xrefs":{"Monarch":{"xref_id":"1011431"}}}


id: PBO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 9","termid":"PBO:0072120"}


id: PBO:0084929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA binding protein, member of the CCCH zinc finger family; similar to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; functions with Tis11p in regulation of iron homeostasis; CTH1 has a paralog, TIS11, that arose from the whole genome duplication","termid":"PBO:0084929"}


id: PBO:0059266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L32","termid":"PBO:0059266"}


id: GO:1904589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein import.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11406629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"protein import","termid":"GO:0017038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein import","synonyms":[{"name":"regulation of protein uptake","type":"exact"}],"termid":"GO:1904589"}


id: GO:0097322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 7SK small nuclear RNA (7SK snRNA).","definition_xrefs":["PMID:21853533","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"7SK snRNA binding","synonyms":[{"name":"7SK small nuclear RNA binding","type":"exact"}],"termid":"GO:0097322"}


id: SO:1001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different start codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_peptides_different_start","synonyms":[{"name":"encodes overlapping peptides different start","type":"exact"}],"termid":"SO:1001191"}


id: MONDO:0020137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontotemporal degeneration with dementia (obsolete MONDO:0020137)","secondary_identifiers":["Orphanet:98535"],"termid":"MONDO:0020137","xrefs":{"Monarch":{"xref_id":"0020137"}}}


id: MONDO:1012441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial episodic spinocerebellar ataxia, non-human animal","termid":"MONDO:1011889"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial episodic spinocerebellar ataxia, sheep","secondary_identifiers":["OMIA:001723-9940"],"termid":"MONDO:1012441","xrefs":{"Monarch":{"xref_id":"1012441"}}}


id: GO:0034803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2-naphthoate + O2 = (3E)-3-[(6Z)-6-(carboxymethylene)cyclohexa-2,4-dien-1-ylidene]-2-oxopropanate.","definition_xrefs":["UM-BBD_reactionID:r1104"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2-naphthoate 2,3-dioxygenase activity (obsolete GO:0034803)","termid":"GO:0034803"}


id: PBO:0034551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_subtelomeric_chromatin_knob_formation","termid":"PBO:0034551"}


id: GO:0042204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any s-triazine compound. These compounds include many pesticides of widespread use in agriculture, and are characterized by a symmetrical hexameric ring consisting of alternating carbon and nitrogen atoms.","definition_xrefs":["UM-BBD_pathwayID:tria"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"s-triazine compound catabolic process","synonyms":[{"name":"s-triazine compound breakdown","type":"exact"},{"name":"s-triazine compound catabolism","type":"exact"},{"name":"s-triazine compound degradation","type":"exact"}],"termid":"GO:0042204"}


id: PBO:0059759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 33","termid":"PBO:0059759"}


id: PBO:0057213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378c","termid":"PBO:0057213"}


id: GO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism causes swelling of soft tissues in another organism via the action of a venom. Edema is the result of excess water accumulation in tissues.","definition_xrefs":["PMID:20562011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated edema in another organism","synonyms":[{"name":"envenomation resulting in induction of edema in another organism","type":"exact"},{"name":"envenomation resulting in induction of edema in other organism","type":"exact"},{"name":"envenomation resulting in induction of oedema in other organism","type":"exact"}],"termid":"GO:0044398"}


id: FYPO:0001181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucosidase activity","termid":"FYPO:0001182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal maltase activity","synonyms":[{"name":"normal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001181"}


id: PBO:0057086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 182","termid":"PBO:0057086"}


id: GO:0004795
data:
  {"annotated_genes":["SJAG_00432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78785],"is_not":false,"summary":null,"term":"GO:0004795"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate.","definition_xrefs":["EC:4.2.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"threonine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:THRESYN-RXN","RHEA:10840"],"synonyms":[{"name":"O-phospho-L-homoserine phospho-lyase (adding water)","type":"related"},{"name":"O-phospho-L-homoserine phospho-lyase (adding water; L-threonine-forming)","type":"related"},{"name":"threonine synthetase activity","type":"related"}],"termid":"GO:0004795","terms_by_termid":{"GO:0004795":null}}


id: GO:0170011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecule that recognizes stalled ribosomes and initiates a signaling response.","definition_xrefs":["PMID:32610081","PMID:32289254","PMID:36638793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"stalled ribosome sensor activity","termid":"GO:0170011"}


id: PBO:0066493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 4","termid":"PBO:0066493"}


id: PBO:0088682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85b","termid":"PBO:0088682"}


id: GO:0035699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T-helper 17 cell from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell extravasation","termid":"GO:0035684"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell extravasation","termid":"GO:0035699"}


id: MONDO:0015142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ataxia syndrome (obsolete MONDO:0015142)","termid":"MONDO:0015142","xrefs":{"Monarch":{"xref_id":"0015142"}}}


id: GO:1903932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA primase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:14766746"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA primase activity (obsolete GO:1903932)","termid":"GO:1903932"}


id: MONDO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the cervical epithelium. It accounts for approximately 15% of invasive cervical carcinomas. Increased numbers of sexual partners and human papillomavirus (HPV) infection are risk factors. Grossly, advanced cervical adenocarcinoma may present as an exophytic mass, an ulcerated lesion, or diffuse cervical enlargement. Microscopically, the majority of cervical adenocarcinomas are of the endocervical (mucinous) type.","definition_xrefs":["NCIT:C4029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenocarcinoma","secondary_identifiers":["ONCOTREE:CEAD","ICD10CM:C53.0","EFO:0001416","MEDGEN:79024","SCTID:254887002","icd11.foundation:261293318","DOID:3702","GARD:20488","Orphanet:213772","UMLS:C0279672"],"synonyms":[{"name":"adenocarcinoma - cervix","type":"exact"},{"name":"adenocarcinoma cervix uteri","type":"exact"},{"name":"adenocarcinoma of cervix","type":"exact"},{"name":"adenocarcinoma of cervix uteri","type":"exact"},{"name":"adenocarcinoma of the cervix","type":"exact"},{"name":"adenocarcinoma of the cervix uteri","type":"exact"},{"name":"adenocarcinoma of the uterine cervix","type":"exact"},{"name":"adenocarcinoma of uterine cervix","type":"exact"},{"name":"cervical adenocarcinoma","type":"exact"},{"name":"cervix adenocarcinoma","type":"exact"},{"name":"cervix uteri adenocarcinoma","type":"exact"},{"name":"uterine cervix adenocarcinoma","type":"exact"}],"termid":"MONDO:0005153","xrefs":{"Monarch":{"xref_id":"0005153"}}}


id: MONDO:1011917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypercalciuria, non-human animal","secondary_identifiers":["OMIA:002384"],"termid":"MONDO:1011917","xrefs":{"Monarch":{"xref_id":"1011917"}}}


id: PR:000050512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that lacks phosphorylation at the position equivalent to Ser-412 and that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:33888556","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos:(S450),UnPhos(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:2","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos:(S450),UnPhos(S412)","type":"exact"}],"termid":"PR:000050512"}


id: GO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"positive regulation of NOD1 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070430"}


id: MONDO:0004398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that arises from the posterior mediastinum. It is the most common neurogenic tumor of the mediastinum. Excision is usually curative.","definition_xrefs":["NCIT:C6643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"is_a","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"peripheral nerve schwannoma","termid":"MONDO:0004820"},{"relation_name":"is_a","term_name":"benign neoplasm of mediastinum","termid":"MONDO:0021521"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal schwannoma","secondary_identifiers":["DOID:6175","MEDGEN:233688","UMLS:C1334679","DOID:7922"],"synonyms":[{"name":"benign mediastinal neurilemmoma","type":"exact"},{"name":"benign mediastinal schwannoma","type":"exact"},{"name":"benign neurilemmoma of mediastinum","type":"exact"},{"name":"benign neurilemmoma of the mediastinum","type":"exact"},{"name":"benign schwannoma of mediastinum","type":"exact"},{"name":"benign schwannoma of the mediastinum","type":"exact"},{"name":"mediastinal neurilemmoma","type":"exact"},{"name":"mediastinal schwannoma","type":"exact"},{"name":"mediastinum schwannoma","type":"exact"},{"name":"neurilemmoma of mediastinum","type":"exact"},{"name":"neurilemmoma of the mediastinum","type":"exact"},{"name":"schwannoma of mediastinum","type":"exact"},{"name":"schwannoma of the mediastinum","type":"exact"}],"termid":"MONDO:0004398","xrefs":{"Monarch":{"xref_id":"0004398"}}}


id: GO:0021568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:curators","GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 development","termid":"GO:0021568"}


id: GO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The strong but reversible binding of a heavy metal ion by a larger molecule such as protein.","definition_xrefs":["GOC:jl","ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal chelation (obsolete GO:0042142)","synonyms":[{"name":"heavy metal chelation","type":"exact"}],"termid":"GO:0042142"}


id: MONDO:0008331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Apparent optic disk swelling in the absence of increased intracranial pressure.","gene_count":0,"genotype_count":0,"name":"obsolete pseudopapilledema (obsolete MONDO:0008331)","secondary_identifiers":["OMIM:177800","MESH:C562401","ICD9:377.24","SCTID:57138009","Orphanet:519339","DOID:1392"],"synonyms":[{"name":"crowded optic disk","type":"related"},{"name":"obsolete pseudopapilledema (disease)","type":"exact"},{"name":"pseudopapilledema","type":"exact"}],"termid":"MONDO:0008331","xrefs":{"Monarch":{"xref_id":"0008331"}}}


id: GO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway resulting in the formation of ergothioneine from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine or histidine betaine).","definition_xrefs":["KEGG_REACTION:R04878"],"gene_count":0,"genotype_count":0,"name":"obsolete ergothioneine biosynthesis from N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (obsolete GO:0052711)","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism to ergothioneine","type":"exact"},{"name":"ergothioneine biosynthesis from hercynine","type":"exact"},{"name":"ergothioneine biosynthesis from histidine betaine","type":"exact"},{"name":"hercynine catabolism to ergothioneine","type":"exact"},{"name":"histidine betaine catabolism to ergothioneine","type":"exact"}],"termid":"GO:0052711"}


id: PBO:0048720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 3","termid":"PBO:0048720"}


id: MONDO:0010157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophanuria with dwarfism","secondary_identifiers":["UMLS:C0268473","MEDGEN:78680","ICD9:259.4","MESH:C562658","OMIM:276100","SCTID:12045002"],"synonyms":[{"name":"Tryptophanuria with dwarfism","type":"exact"}],"termid":"MONDO:0010157","xrefs":{"Monarch":{"xref_id":"0010157"}}}


id: PBO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 59","termid":"PBO:0048348"}


id: PBO:0117417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 12","termid":"PBO:0117417"}


id: PBO:0074836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 31","termid":"PBO:0074836"}


id: PBO:0030425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constricted_nucleus","termid":"PBO:0030425"}


id: PBO:0034369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-commensually_interacts_with","termid":"PBO:0034369"}


id: PBO:0054305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1697","termid":"PBO:0054305"}


id: PBO:0046328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOPH1 pseudogene 1","termid":"PBO:0046328"}


id: PATO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000288 relative litter size (obsolete PATO:0000288)","termid":"PATO:0000288"}


id: PBO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase, type II Lsb6","termid":"PBO:0110105"}


id: GO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of platelet activating factor following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activating factor production involved in inflammatory response","secondary_identifiers":["GO:0002535","GO:0002390","GO:0002392"],"synonyms":[{"name":"platelet activating factor production","type":"related"},{"name":"platelet activating factor production involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion","type":"narrow"},{"name":"platelet activating factor secretion involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion involved in inflammatory response","type":"narrow"}],"termid":"GO:0002391"}


id: GO:0035443
data:
  {"annotated_genes":["SJAG_03577","SJAG_05213","SJAG_03497","SJAG_01344","SJAG_01983","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[98974,97986,120242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[104961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide across a membrane by means of some agent such as a transporter or pore. A tripeptide is a compound containing three amino acids linked together by peptide bonds.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"tripeptide transport","termid":"GO:0042939"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"tripeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tripeptide membrane transport","type":"exact"}],"termid":"GO:0035443","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: PBO:0075829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 4","termid":"PBO:0075829"}


id: MOD:01392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue, and C-4 methylates to form L-asparagine 5-methylthiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","PubMed:10625477","PubMed:7844053","RESID:AA0469"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"C-methylated residue","termid":"MOD:00656"},{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-bisazanyl-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methylthiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01392"}


id: PBO:0078291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (GCA) 24-1","termid":"PBO:0078291"}


id: MONDO:0018674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic fibrotic inflammatory process affecting the salivary gland. Signs and symptoms include firm and painful swelling of the salivary gland, often associated with the presence of salivary gland stones.","definition_xrefs":["NCIT:C82887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"immunoglobulin G4-related sclerosing disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related submandibular gland disease","secondary_identifiers":["Orphanet:449432","icd11.foundation:588811750","MEDGEN:1830092","SCTID:448131008","UMLS:C5679995","GARD:21884"],"synonyms":[{"name":"IgG4-related sialadenitis","type":"exact"},{"name":"Kuttner tumor","type":"exact"},{"name":"Kuttner tumour","type":"exact"},{"name":"Kuttner's tumor","type":"exact"},{"name":"Kuttner's tumour","type":"exact"},{"name":"Küttner tumor","type":"exact"},{"name":"Küttner tumour","type":"exact"},{"name":"chronic sclerosing sialadenitis","type":"exact"}],"termid":"MONDO:0018674","xrefs":{"Monarch":{"xref_id":"0018674"}}}


id: PBO:0052631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT7 antisense RNA 1","termid":"PBO:0052631"}


id: PBO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1 (predicted)","termid":"PBO:0018290"}


id: PBO:0053365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 276","termid":"PBO:0053365"}


id: MONDO:0700193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monocytic leukemia that occurs in a chicken.","definition_xrefs":["NCIT:C134945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken monocytic leukemia","termid":"MONDO:0700193","xrefs":{"Monarch":{"xref_id":"0700193"}}}


id: MONDO:0032645
data:
  {"annotated_genes":["SJAG_03930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88096],"is_not":false,"summary":null,"term":"MONDO:0032645"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03930":null},"genotype_count":0,"is_obsolete":false,"name":"trichohepatoneurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618268","MEDGEN:1648322","UMLS:C4748898"],"synonyms":[{"name":"THNS","type":"related"},{"name":"TRICHOHEPATONEURODEVELOPMENTAL SYNDROME","type":"related"}],"termid":"MONDO:0032645","terms_by_termid":{"MONDO:0032645":null},"xrefs":{"Monarch":{"xref_id":"0032645"}}}


id: FYPO:0002893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to cAMP. Specific genes are more highly transcribed in the presence of cAMP in the mutant than in wild type.","definition_xrefs":["PomBase:mah","PMID:22496451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to cAMP","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to cAMP","type":"exact"},{"name":"decreased repression of transcription during cellular response to cAMP during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to cAMP during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to cAMP","type":"exact"},{"name":"reduced repression of transcription during cellular response to cAMP","type":"exact"}],"termid":"FYPO:0002893"}


id: GO:0102432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin + S-adenosyl-L-methionine = H+ + rhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13906"],"termid":"GO:0102432"}


id: MONDO:1010281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, non-human animal","secondary_identifiers":["OMIA:001535"],"termid":"MONDO:1010281","xrefs":{"Monarch":{"xref_id":"1010281"}}}


id: GO:0047265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(glycerol phosphate) + UDP-D-glucose = alpha-D-glucosylpoly(glycerol phosphate) + UDP.","definition_xrefs":["EC:2.4.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(glycerol-phosphate) alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN5-RXN","RHEA:15845"],"synonyms":[{"name":"UDP glucose-poly(glycerol-phosphate) alpha-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:poly(glycerol-phosphate) alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:poly(glycerol-phosphate) alpha-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-poly(glycerol-phosphate) alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0047265"}


id: PBO:0069388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 648, pseudogene","termid":"PBO:0069388"}


id: FYPO:0000856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleosome positioning","synonyms":[{"name":"normal nucleosome occupancy","type":"related"},{"name":"normal nucleosome positioning during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing","type":"exact"}],"termid":"FYPO:0000856"}


id: PBO:0048188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 3 pseudogene","termid":"PBO:0048188"}


id: PBO:0065208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF39 divergent transcript","termid":"PBO:0065208"}


id: GO:0018586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyltin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mono-butyltin dioxygenase activity (obsolete GO:0018586)","synonyms":[{"name":"MBT dioxygenase activity","type":"exact"}],"termid":"GO:0018586"}


id: MONDO:0017244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthomatous diffuse cutaneous mastocytosis (PDCM) is a rare form of diffuse cutaneous mastocytosis (DCM) characterized by yellow-orange infiltrated and xanthogranuloma-like lesions with only limited blistering.","definition_xrefs":["Orphanet:280794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse cutaneous mastocytosis","termid":"MONDO:0019315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"pseudoxanthomatous diffuse cutaneous mastocytosis","secondary_identifiers":["MEDGEN:1842453","UMLS:C5679949","GARD:21089"],"synonyms":[{"name":"Pseudoxanthomatous DCM","type":"exact"},{"name":"infiltrative small vesicular DCM","type":"exact"},{"name":"infiltrative small vesicular diffuse cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0017244","xrefs":{"Monarch":{"xref_id":"0017244"}}}


id: PBO:0108981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 5","termid":"PBO:0108981"}


id: MONDO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis - hypertrichosis syndrome is a rare autosomal dominant disorder characterized by a generalized enlargement of the gingiva occurring at birth or during childhood that is associated with generalized hypertrichosis developing at birth, during the first years of life, or at puberty and predominantly affecting the face, upper limbs, and midback.","definition_xrefs":["Orphanet:2026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gingival fibromatosis-hypertrichosis syndrome","secondary_identifiers":["OMIM:135400","SCTID:716008002","GARD:2324","MEDGEN:342675","MESH:C565016","UMLS:C1851120"],"synonyms":[{"name":"CGHT","type":"exact"},{"name":"HTC3","type":"related"},{"name":"chromosome 17Q24.2-q24.3 Duplication syndrome","type":"related"},{"name":"chromosome 17Q24.2-q24.3 deletion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis terminalis","type":"exact"},{"name":"congenital generalized hypertrichosis terminalis","type":"exact"},{"name":"extreme hirsutism with gingival fibromatosis","type":"related"},{"name":"fibromatosis, gingival, with hypertrichosis","type":"related"},{"name":"gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hereditary gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hirsutism-congenital gingival hyperplasia syndrome","type":"exact"},{"name":"hypertrichosis terminalis, generalized, with gingival hyperplasia","type":"related"},{"name":"hypertrichosis terminalis, generalized, with or without gingival hyperplasia","type":"related"},{"name":"hypertrichosis with or without gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with or without gingival hyperplasia","type":"related"},{"name":"microdeletion 17Q24.2-q24.3 syndrome","type":"related"},{"name":"microduplication 17Q24.2-q24.3 syndrome","type":"related"}],"termid":"MONDO:0007610","xrefs":{"Monarch":{"xref_id":"0007610"}}}


id: MONDO:0957025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary 46,XY disorder of sex development (obsolete MONDO:0957025)","secondary_identifiers":["Orphanet:325706"],"synonyms":[{"name":"genetic 46,XY disorder of sex development","type":"exact"}],"termid":"MONDO:0957025","xrefs":{"Monarch":{"xref_id":"0957025"}}}


id: PBO:0040891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A","termid":"PBO:0040891"}


id: PR:Q9P7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.16c","synonyms":[{"name":"Spom972h-SPCC24B10.16c","type":"exact"}],"termid":"PR:Q9P7J0"}


id: PBO:0017823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2 (predicted)","termid":"PBO:0017823"}


id: PBO:0083796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of unknown function; with orthologs in Ashbya gossypii and Candida albicans; similar to human ATXN10, mutations in which cause spinocerebellar ataxia type 10; codon usage corresponds to that observed for yeast genes expressed at low levels; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0083796"}


id: PR:Q9P7K3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase C24B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.02c","synonyms":[{"name":"Spom972h-SPCC24B10.02c","type":"exact"}],"termid":"PR:Q9P7K3"}


id: GO:0043406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MAP kinase activity","synonyms":[{"name":"positive regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"positive regulation of mitogen-activated protein kinase activity","type":"exact"},{"name":"stimulation of MAPK activity","type":"narrow"},{"name":"up regulation of MAPK activity","type":"exact"},{"name":"up-regulation of MAPK activity","type":"exact"},{"name":"upregulation of MAPK activity","type":"exact"}],"termid":"GO:0043406"}


id: GO:2000012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auxin polar transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of auxin polar transport","termid":"GO:2000012"}


id: PBO:0088740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex ChAPs family (Chs5p-Arf1p-binding) protein Bch1","termid":"PBO:0088740"}


id: MOD:00089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080","Unimod:47#S","OMSSA:94","PubMed:3467339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(hexadecanoyloxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-palmitoyl serine intermediate","type":"exact"},{"name":"L-serine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl serine","type":"exact"},{"name":"O-hexadecanoylated L-serine","type":"exact"},{"name":"O-palmitoyl-L-serine","type":"exact"},{"name":"O-palmitoylated L-serine","type":"exact"},{"name":"O3-palmitoyl-serine","type":"exact"},{"name":"OPamSer","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylations","type":"exact"},{"name":"serine palmitate ester","type":"exact"}],"termid":"MOD:00089"}


id: PBO:0029832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_vegetative_cell","termid":"PBO:0029832"}


id: PBO:0063067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU3F3 adjacent non-coding transcript 1","termid":"PBO:0063067"}


id: GO:0035177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a larva through a feeding substrate whilst feeding on food.","definition_xrefs":["PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"},{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval foraging behavior","synonyms":[{"name":"larval foraging behaviour","type":"exact"}],"termid":"GO:0035177"}


id: MONDO:0003081
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A disorder of the thalamus. Causes include brain neoplasms, cerebrovascular disorders, brain trauma, brain hypoxia, infections, and brain hemorrhage. Signs and symptoms include movement and sensory abnormalities, visual abnormalities, ataxia, and coma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"thalamic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C85186","DOID:4662","MEDGEN:52693","MESH:D013786","UMLS:C0039726"],"synonyms":[{"name":"disease of dorsal plus ventral thalamus","type":"exact"},{"name":"disease or disorder of dorsal plus ventral thalamus","type":"exact"},{"name":"disorder of dorsal plus ventral thalamus","type":"exact"},{"name":"dorsal plus ventral thalamus disease","type":"exact"},{"name":"dorsal plus ventral thalamus disease or disorder","type":"exact"}],"termid":"MONDO:0003081","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003081"}}}


id: MONDO:1012963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Centronuclear myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963","xrefs":{"Monarch":{"xref_id":"1012963"}}}


id: PBO:0078799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 17-1","termid":"PBO:0078799"}


id: PBO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt2","termid":"PBO:0000869"}


id: GO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of cytolysis of symbiont cells (obsolete GO:0051840)","synonyms":[{"name":"down regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"down-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"downregulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"inhibition by host of cytolysis of symbiont cells","type":"narrow"}],"termid":"GO:0051840"}


id: PBO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 57","termid":"PBO:0042003"}


id: PBO:0091018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase Ryh1","termid":"PBO:0091018"}


id: PBO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP2 divergent transcript","termid":"PBO:0050005"}


id: GO:0106030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of neuronal projections into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:aruk","GOC:bc.","PMID:12761826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection fasciculation","termid":"GO:0106030"}


id: GO:0102417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: apigenin 7-O-beta-D-glucoside + UDP-alpha-D-glucose = apigenin-7-O-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete apigenin-7-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102417)","termid":"GO:0102417"}


id: PBO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF1R antisense imprinted non-protein coding RNA","termid":"PBO:0051814"}


id: GO:0047241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lipopolysaccharide + UDP-N-acetylmannosaminouronate = N-acetyl-beta-D-mannosaminouronosyl-1,4-lipopolysaccharide + UDP.","definition_xrefs":["RHEA:28366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"},{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide N-acetylmannosaminouronosyltransferase activity","secondary_identifiers":["EC:2.4.1.180","MetaCyc:UDPMANACATRANS-RXN"],"synonyms":[{"name":"LPS N-acetylmannosaminouronosyltransferase activity","type":"exact"},{"name":"ManNAcA transferase activity","type":"related"},{"name":"UDP-N-acetyl-beta-D-mannosaminouronate:lipopolysaccharide N-acetyl-beta-D-mannosaminouronosyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylmannosaminuronate-acetylglucosaminylpyrophosphorylundecaprenol acetylmannosaminuronosyltransferase activity","type":"related"}],"termid":"GO:0047241"}


id: GO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a host cell that contains the viral genome.","definition_xrefs":["GOC:bm","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell viral nucleoid","termid":"GO:0039643"}


id: PR:P78750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.06","synonyms":[{"name":"Spom972h-utp18","type":"exact"},{"name":"U3 snoRNA-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78750"}


id: PBO:0054938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2352","termid":"PBO:0054938"}


id: PR:O14178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L40, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.02c","synonyms":[{"name":"Spom972h-mrpl40","type":"exact"}],"termid":"PR:O14178"}


id: GO:0101027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons of the optical nerve following their loss or damage.","definition_xrefs":["GOC:pga","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optical nerve axon regeneration","termid":"GO:0101027"}


id: PBO:0089662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic asparagine-tRNA ligase Nrs1","termid":"PBO:0089662"}


id: GO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B2","termid":"GO:0033274"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B2","synonyms":[{"name":"cellular response to riboflavin","type":"exact"}],"termid":"GO:0071302"}


id: GO:0021553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the olfactory nerve over time, from its formation to the mature structure. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve development","synonyms":[{"name":"CN 1 development","type":"related"},{"name":"cranial nerve 1 development","type":"exact"},{"name":"cranial nerve I development","type":"exact"}],"termid":"GO:0021553"}


id: GO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is a branch of a unicellular trichome.","definition_xrefs":["GOC:tb","PO:0025537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome branch","termid":"GO:0090405"}


id: PBO:0068096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 403","termid":"PBO:0068096"}


id: FYPO:0001921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein export from the nucleus does not occur. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"},{"relation_name":"is_a","term_name":"abolished nuclear export","termid":"FYPO:0000507"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein export from nucleus","synonyms":[{"name":"abolished protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"absent protein export from nucleus","type":"exact"},{"name":"protein export from nucleus abolished","type":"exact"},{"name":"protein export from nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001921"}


id: PBO:0056511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 1","termid":"PBO:0056511"}


id: MONDO:0005254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart failure which results in symptoms such as shortness of breath, fatigue, inability to exerciseb& etc","definition_xrefs":["EFO:0003146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"symptomatic heart failure","termid":"MONDO:0005254","xrefs":{"Monarch":{"xref_id":"0005254"}}}


id: PBO:0081773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705A","termid":"PBO:0081773"}


id: PBO:0028819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028819"}


id: PBO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 3","termid":"PBO:0050803"}


id: FYPO:0007899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein to the actomyosin contractile ring is increased.","definition_xrefs":["PMID:34613787","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0000138"],"is_obsolete":false,"name":"increased rate of protein localization to actomyosin contractile ring","synonyms":[{"name":"increased rate of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased rate of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased rate of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased rate of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased rate of protein localization to mitotic contractile ring","type":"exact"}],"termid":"FYPO:0007899"}


id: MONDO:0014850
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87463,87464],"is_not":false,"summary":null,"term":"MONDO:0014850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa and erythrocytic microcytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310776","OMIM:616959","MEDGEN:934743"],"synonyms":[{"name":"RPEM","type":"exact"},{"name":"retinitis pigmentosa and erythrocytic microcytosis","type":"exact"},{"name":"retinitis pigmentosa and erythrocytic microcytosis; RPEM","type":"exact"}],"termid":"MONDO:0014850","terms_by_termid":{"MONDO:0014850":null},"xrefs":{"Monarch":{"xref_id":"0014850"}}}


id: FYPO:0004797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is normal (i.e. indistinguishable from wild type) during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:22558440","PomBase:mah","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis I","termid":"FYPO:0003563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal azygotic meiosis I","synonyms":[{"name":"normal azygotic first meiotic nuclear division","type":"exact"},{"name":"normal meiosis I during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004797"}


id: GO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of phospholipase D.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase inhibitor activity","termid":"GO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"phospholipase D inhibitor activity","termid":"GO:0060961"}


id: PBO:0117188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTNA antisense RNA 1","termid":"PBO:0117188"}


id: GO:0009640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The control of plant growth, development, and differentiation by the duration and nature of light, independent of photosynthesis.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photomorphogenesis","secondary_identifiers":["Wikipedia:Photomorphogenesis"],"synonyms":[{"name":"plant development in response to light","type":"exact"}],"termid":"GO:0009640"}


id: PBO:0075083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 133","termid":"PBO:0075083"}


id: GO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002155"}


id: GO:0043041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"},{"relation_name":"part_of","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid activation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"nonribosomal amino acid activation","type":"related"}],"termid":"GO:0043041"}


id: MONDO:0006215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the gall bladder.","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder adenocarcinoma","secondary_identifiers":["NCIT:C9166","UMLS:C0279651","EFO:1000262","MEDGEN:76009","DOID:3500"],"synonyms":[{"name":"adenocarcinoma of gallbladder","type":"exact"},{"name":"adenocarcinoma of the gallbladder","type":"exact"},{"name":"gall bladder adenocarcinoma","type":"exact"},{"name":"gallbladder adenocarcinoma","type":"exact"}],"termid":"MONDO:0006215","xrefs":{"Monarch":{"xref_id":"0006215"}}}


id: PBO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 4","termid":"PBO:0052781"}


id: PATO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape with properties between those of a square and those of a circle.","definition_xrefs":["wikipedia:Squircle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squircle","termid":"PATO:0002319"}


id: GO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of apoptotic process.","definition_xrefs":["GOC:jl","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"},{"relation_name":"part_of","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in positive regulation of apoptotic process","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptosis","type":"narrow"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptotic process","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of apoptosis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of apoptotic process","type":"exact"}],"termid":"GO:0044337"}


id: GO:0060104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense, amorphous envelope that comprises the outermost layer of the cuticle. The surface coat is loosely apposed to the epicuticle, has distinct biochemical properties, is synthesized by cells other than the underlying hypodermis, and is labile. In addition to serving as a lubricant to protect against abrasion and dehydration, the surface coat may also play important roles in infection and immune evasion. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:kmv","GOC:dph","ISSN:15518507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"surface coat of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"surface coat of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060104"}


id: PBO:0038728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 23","termid":"PBO:0038728"}


id: GO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate + Na+(out) => ATP + H2O + Na+(in), by a rotational mechanism.","definition_xrefs":["RHEA:58158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0016874","GO:0005215","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sodium-transporting ATP synthase activity, rotational mechanism","secondary_identifiers":["TC:3.A.2.1.2"],"synonyms":[{"name":"sodium-translocating F-type ATPase activity","type":"exact"},{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0046932"}


id: PBO:0077674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 21","termid":"PBO:0077674"}


id: PBO:0077651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 3","termid":"PBO:0077651"}


id: GO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte proliferation","termid":"GO:0010837"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte proliferation","termid":"GO:0010838"}


id: GO:1900207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:9758706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"},{"relation_name":"negatively_regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pronephric nephron tubule development","synonyms":[{"name":"down regulation of pronephric nephron tubule development","type":"exact"},{"name":"down-regulation of pronephric nephron tubule development","type":"exact"},{"name":"downregulation of pronephric nephron tubule development","type":"exact"},{"name":"inhibition of pronephric nephron tubule development","type":"narrow"}],"termid":"GO:1900207"}


id: GO:1900534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"palmitic acid metabolic process","termid":"GO:1900533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"palmitic acid catabolic process","termid":"GO:1900534"}


id: MONDO:0700159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor arising from odontogenic epithelium and occurs in a dog.","definition_xrefs":["NCIT:C134956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine acanthomatous epulis","termid":"MONDO:0700159","xrefs":{"Monarch":{"xref_id":"0700159"}}}


id: PBO:0069968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1263, pseudogene","termid":"PBO:0069968"}


id: MONDO:1011404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder, non-human animal","termid":"MONDO:1011338"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic syndrome, non-human animal","secondary_identifiers":["OMIA:001898"],"termid":"MONDO:1011404","xrefs":{"Monarch":{"xref_id":"1011404"}}}


id: FYPO:0000073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to caffeine","synonyms":[{"name":"resistance to caffeine during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during vegetative growth","type":"exact"},{"name":"resistant to caffeine","type":"exact"}],"termid":"FYPO:0000073"}


id: PBO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helix-Extension-Helix domain protein","termid":"PBO:0001431"}


id: FYPO:0001949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"},{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic calcium level","synonyms":[{"name":"increased cytosolic calcium ion level","type":"exact"},{"name":"increased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"increased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"increased level of calcium ions in cytosol","type":"exact"},{"name":"increased levels of free cytosolic calcium","type":"exact"}],"termid":"FYPO:0001949"}


id: PBO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 2","termid":"PBO:0052114"}


id: PBO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 27","termid":"PBO:0071186"}


id: GO:0033632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033632"}


id: GO:1905348
data:
  {"annotated_genes":["SJAG_03789","SJAG_00623","SJAG_02374","SJAG_00955","SJAG_03796","SJAG_04062","SJAG_02547","SJAG_04916","SJAG_00306","SJAG_03234","SJAG_06613","SJAG_02553","SJAG_01623","SJAG_03425","SJAG_04252","SJAG_01260","SJAG_01581","SJAG_01044","SJAG_03496","SJAG_01369","SJAG_02275","SJAG_04582","SJAG_00754","SJAG_04907","SJAG_03328","SJAG_03952","SJAG_01551","SJAG_01056"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76106,81098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048476"},{"annotations":[120601,96868,65678,93589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[106513,64509,117323,60959,117411,101416,92972,120640,72937,73508,73170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"},{"annotations":[75360,64508,107621,72978,117413,107620,117325,60958,77830,92973,73507,98711,81223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000172"},{"annotations":[106063,120232,119213,80424,73434,120606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120330"},{"annotations":[75708,61061,73222,80753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endonuclease activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:18413719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00623":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01044":null,"SJAG_01056":null,"SJAG_01260":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03496":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04062":null,"SJAG_04252":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endonuclease complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905348","terms_by_termid":{"GO:0000172":null,"GO:0000214":null,"GO:0005655":null,"GO:0048476":null,"GO:0090730":null,"GO:0120330":null}}


id: PBO:0025436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5B Tif52 (predicted)","termid":"PBO:0025436"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: PBO:0085959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression affects endocytic protein trafficking; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0085959"}


id: MONDO:0006787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign cystic proliferation of the sweat glands with apocrine or eccrine differentiation. It usually presents as a dome-shaped, cystic papular or nodular lesion usually in the face and neck. It is a unilocular or mutlilocular lesion lined by an inner and an outer layer of epithelium. Complete excision is usually curative.","definition_xrefs":["NCIT:C3760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidrocystoma","secondary_identifiers":["MedDRA:10059019","SCTID:254725004","icd11.foundation:2040265542","ICD9:709.8","EFO:1000967","DOID:3893","MESH:D018251","ICDO:8404/0","MEDGEN:61656","UMLS:C0206672"],"synonyms":[{"name":"Hydrocystoma","type":"exact"},{"name":"apocrine cystadenoma","type":"narrow"},{"name":"apocrine/eccrine hidrocystoma","type":"exact"},{"name":"cystadenoma","type":"related"},{"name":"eccrine cystadenoma","type":"narrow"},{"name":"eccrine hidrocystoma of skin","type":"exact"},{"name":"hidrocystoma","type":"exact"},{"name":"hidrocystoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006787","xrefs":{"Monarch":{"xref_id":"0006787"}}}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: PBO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1B","termid":"PBO:0039574"}


id: GO:0098743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering together and adhesion of initially separate cells to form an aggregate. Examples include the clustering of unicellular organisms or blood cells in suspension and the condensation of mesenchymal cells during cartilage formation.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell aggregation","termid":"GO:0098743"}


id: MONDO:1011995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina, non-human animal","secondary_identifiers":["OMIA:001774"],"termid":"MONDO:1011995","xrefs":{"Monarch":{"xref_id":"1011995"}}}


id: PBO:0076809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance 2","termid":"PBO:0076809"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: GO:0010034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetate","termid":"GO:0010034"}


id: GO:1905573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM1.","definition_xrefs":["PMID:1454804","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"ganglioside GM1 binding","termid":"GO:1905573"}


id: PBO:0073871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member C1","termid":"PBO:0073871"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: PBO:0057031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 126","termid":"PBO:0057031"}


id: PATO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000522 herbicide sensitivity value (obsolete PATO:0000522)","termid":"PATO:0000522"}


id: PBO:0063760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1 pseudogene 1","termid":"PBO:0063760"}


id: FYPO:0000339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in an abnormal location. The normal location is at the midpoint of the long axis of the cell. The site of septum assembly is normally determined by the location of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized septum during vegetative growth","secondary_identifiers":["FYPO:0002154"],"synonyms":[{"name":"abnormal contractile ring localization resulting in abnormal septum site selection","type":"related"},{"name":"abnormal contractile ring localization resulting in mislocalized septum","type":"related"},{"name":"abnormal division septum site selection","type":"related"},{"name":"abnormal septum localization during vegetative growth","type":"related"},{"name":"abnormal septum location during vegetative growth","type":"exact"},{"name":"abnormal septum position during vegetative growth","type":"exact"},{"name":"abnormal septum positioning during vegetative growth","type":"related"},{"name":"abnormal septum postitioning","type":"exact"},{"name":"abnormal septum site selection","type":"related"},{"name":"abnormal septum site selection during mitotic cell cycle","type":"related"},{"name":"abnormal septum site selection during vegetative growth","type":"related"},{"name":"asymmetric septum during vegetative growth","type":"exact"},{"name":"asymmetrically located septum during vegetative growth","type":"exact"},{"name":"mislocalised septum during vegetative growth","type":"exact"},{"name":"mislocalized septum during mitotic cell cycle","type":"related"},{"name":"misplaced septum during vegetative growth","type":"exact"},{"name":"septum site selection defects","type":"related"}],"termid":"FYPO:0000339"}


id: FYPO:0008398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the level of cell damage is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal level of cell damage","termid":"FYPO:0008398"}


id: GO:1901656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycoside transport","termid":"GO:1901656"}


id: MONDO:1012395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rupture of the cranial cruciate ligament, non-human animal","termid":"MONDO:1011960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rupture of the cranial cruciate ligament, dog","secondary_identifiers":["OMIA:001474-9615"],"termid":"MONDO:1012395","xrefs":{"Monarch":{"xref_id":"1012395"}}}


id: GO:0038142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated epidermal growth factor receptor (EGFR/ERBB1). ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as EGFR.","definition_xrefs":["PMID:1973074","PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"EGFR:ERBB2 complex","synonyms":[{"name":"EGF:EGFR:ERBB2 complex","type":"narrow"},{"name":"EGFR:ERBB2 heterodimer","type":"related"}],"termid":"GO:0038142"}


id: GO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD+ = 3-methylbutanal + NADH + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["KEGG_REACTION:R05685","RHEA:18529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"},{"relation_name":"is_a","term_name":"3-methylbutanal reductase [NAD(P)H] activity","termid":"GO:0046568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanal reductase (NADH) activity","synonyms":[{"name":"3-methylbutanal reductase (NAD) activity","type":"exact"},{"name":"3-methylbutanol:NAD oxidoreductase activity","type":"exact"},{"name":"3-methylbutanol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-methylbutyraldehyde reductase (NAD) activity","type":"exact"},{"name":"isoamyl alcohol oxidase (NAD) activity","type":"exact"}],"termid":"GO:0052676"}


id: PBO:0069232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 487, pseudogene","termid":"PBO:0069232"}


id: MONDO:0040503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CTNND1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 2","secondary_identifiers":["DOID:0080346","UMLS:C4540127","GARD:16244","MEDGEN:1623594","OMIM:617681"],"synonyms":[{"name":"BCDS2","type":"related"},{"name":"BLEPHAROCHEILODONTIC syndrome 2","type":"related"},{"name":"CTNND1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CTNND1","type":"exact"}],"termid":"MONDO:0040503","xrefs":{"Monarch":{"xref_id":"0040503"}}}


id: PBO:0116283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor, structural and functional homolog of human FAM192A; plays structural role in intermediate spliceosomal C* complex, which executes exon ligation; required for survival upon exposure to K1 killer toxin; proposed to regulate double-strand break repair via non-homologous end-joining","termid":"PBO:0116283"}


id: PBO:0075437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N2","termid":"PBO:0075437"}


id: GO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a copper protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","secondary_identifiers":["EC:1.20.9.-"],"termid":"GO:0052882"}


id: PBO:0045931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member D2","termid":"PBO:0045931"}


id: MONDO:0008304
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87811,87812],"is_not":false,"summary":null,"term":"MONDO:0008304"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"is_obsolete":false,"name":"premature chromatid separation trait","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:400517","OMIM:176430","UMLS:C1864389"],"synonyms":[{"name":"PCS","type":"related"},{"name":"premature chromatid separation trait","type":"exact"},{"name":"total premature chromatid separation trait","type":"related"}],"termid":"MONDO:0008304","terms_by_termid":{"MONDO:0008304":null},"xrefs":{"Monarch":{"xref_id":"0008304"}}}


id: PR:Q09794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAD protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ura1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.06c","secondary_identifiers":["UniProtKB:Q09794"],"synonyms":[{"name":"Spom972h-CAD","type":"exact"}],"termid":"PR:Q09794"}


id: GO:0047716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1H-imidazole + acetyl-CoA = N-acetylimidazole + CoA.","definition_xrefs":["RHEA:15813","EC:2.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"imidazole N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03621","MetaCyc:IMIDAZOLE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:imidazole N-acetyltransferase activity","type":"related"},{"name":"imidazole acetylase activity","type":"related"},{"name":"imidazole acetyltransferase activity","type":"related"}],"termid":"GO:0047716"}


id: GO:0106097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ceramide","termid":"GO:0106097"}


id: PBO:0064905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, alpha","termid":"PBO:0064905"}


id: PBO:0075125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaphilin","termid":"PBO:0075125"}


id: MONDO:0019884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy of the long arm of chromosome 10 (10q) is characterized by pre- and postnatal growth retardation, a pattern of specific facial features, hypotonia, and developmental and psychomotor delay.","definition_xrefs":["Orphanet:96102"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 10q","secondary_identifiers":["UMLS:C2931728","SCTID:718689000","MEDGEN:419480","NORD:934","GARD:19317","MESH:C538087"],"synonyms":[{"name":"Chromosome 10, Distal Trisomy 10q","type":"exact"},{"name":"distal duplication 10q","type":"exact"},{"name":"distal trisomy type 10q","type":"exact"},{"name":"telomeric duplication 10q","type":"exact"},{"name":"trisomy 10qter","type":"exact"}],"termid":"MONDO:0019884","xrefs":{"Monarch":{"xref_id":"0019884"}}}


id: GO:0032211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomerase","termid":"GO:0032210"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance via telomere lengthening","termid":"GO:1904357"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via telomerase","termid":"GO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via telomerase","synonyms":[{"name":"down regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"down-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"downregulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"inhibition of telomere maintenance via telomerase","type":"narrow"}],"termid":"GO:0032211"}


id: PBO:0111821
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC family","termid":"PBO:0111821"}


id: PBO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochindrial dynamin family GTPase Dnm1","termid":"PBO:0017988"}


id: GO:0033036
data:
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id: MONDO:0001992
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id: SO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:096"],"synonyms":[{"name":"1,2'-O-dimethylguanosine","type":"exact"},{"name":"m1Gm","type":"exact"},{"name":"one two prime O dimethylguanosine","type":"exact"}],"termid":"SO:0001340"}


id: MONDO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transitional cell carcinoma (obsolete MONDO:0002384)","termid":"MONDO:0002384","xrefs":{"Monarch":{"xref_id":"0002384"}}}


id: GO:2000445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 21 signaling pathway","termid":"GO:2000443"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"positive regulation of TLR21 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000445"}


id: GO:0042842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-xylose, a naturally occurring plant polysaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"},{"relation_name":"is_a","term_name":"D-xylose metabolic process","termid":"GO:0042732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-xylose biosynthetic process","synonyms":[{"name":"D-xylose anabolism","type":"exact"},{"name":"D-xylose biosynthesis","type":"exact"},{"name":"D-xylose formation","type":"exact"},{"name":"D-xylose synthesis","type":"exact"}],"termid":"GO:0042842"}


id: MOD:01766
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01766"}


id: GO:1903678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-independent translational initiation","termid":"GO:1903677"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cap-independent translational initiation","synonyms":[{"name":"down regulation of cap-independent translational initiation","type":"exact"},{"name":"down-regulation of cap-independent translational initiation","type":"exact"},{"name":"downregulation of cap-independent translational initiation","type":"exact"},{"name":"inhibition of cap-independent translational initiation","type":"narrow"}],"termid":"GO:1903678"}


id: PBO:0086465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; predicted to be involved in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; not an essential gene; YMR310C has a paralog, YGR283C, that arose from the whole genome duplication","termid":"PBO:0086465"}


id: PATO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000794 immunodeficient value (obsolete PATO:0000794)","termid":"PATO:0000794"}


id: GO:0046006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell proliferation","synonyms":[{"name":"regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"regulation of activated T-cell proliferation","type":"exact"},{"name":"regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046006"}


id: PBO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 3","termid":"PBO:0051513"}


id: MONDO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant cystic serous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.","definition_xrefs":["NCIT:C8377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary cystadenocarcinoma","termid":"MONDO:0005074"},{"relation_name":"is_a","term_name":"serous cystadenocarcinoma","termid":"MONDO:0024621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary serous cystadenocarcinoma","secondary_identifiers":["ICDO:8460/3","DOID:2632","MEDGEN:825029","SCTID:716649003","UMLS:C3839184"],"synonyms":[{"name":"micropapillary serous carcinoma","type":"narrow"},{"name":"papillary serous adenocarcinoma","type":"exact"},{"name":"papillary serous carcinoma","type":"broad"},{"name":"papillary serous cystadenocarcinoma","type":"exact"},{"name":"serous surface papillary carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002368","xrefs":{"Monarch":{"xref_id":"0002368"}}}


id: GO:1900364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA polyadenylation (obsolete GO:1900364)","synonyms":[{"name":"negative regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900364"}


id: PBO:0078142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 21","termid":"PBO:0078142"}


id: PBO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDYL pseudogene 1","termid":"PBO:0042652"}


id: GO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of necroptotic process","secondary_identifiers":["Reactome:R-HSA-5675482"],"synonyms":[{"name":"regulation of necroptosis","type":"narrow"}],"termid":"GO:0060544"}


id: PBO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 6","termid":"PBO:0071778"}


id: PBO:0049672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 4","termid":"PBO:0049672"}


id: PBO:0065757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 2","termid":"PBO:0065757"}


id: MONDO:0011372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly with simplified gyral pattern","secondary_identifiers":["GARD:15360","MEDGEN:350198","UMLS:C1863516","OMIM:603802","MESH:C566332"],"synonyms":[{"name":"microcephaly with simplified gyral pattern","type":"exact"}],"termid":"MONDO:0011372","xrefs":{"Monarch":{"xref_id":"0011372"}}}


id: MONDO:0021492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the major salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"},{"relation_name":"is_a","term_name":"benign neoplasm of salivary gland","termid":"MONDO:0021460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of major salivary gland","secondary_identifiers":["UMLS:C0496858","MEDGEN:96923","SCTID:92205005","ICD9:210.2","NCIT:C4771"],"synonyms":[{"name":"benign Major salivary gland neoplasm","type":"exact"},{"name":"benign Major salivary gland tumor","type":"exact"},{"name":"benign Major salivary gland tumour","type":"exact"},{"name":"benign neoplasm of the Major salivary gland","type":"exact"},{"name":"benign tumor of Major salivary gland","type":"exact"},{"name":"benign tumor of the Major salivary gland","type":"exact"},{"name":"benign tumour of Major salivary gland","type":"exact"},{"name":"benign tumour of the Major salivary gland","type":"exact"},{"name":"major salivary gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021492","xrefs":{"Monarch":{"xref_id":"0021492"}}}


id: GO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the central rod of the bacterial-type flagellar basal body that is proximal to the cell membrane; the proximal rod connects the distal rod to the flagellar motor.","definition_xrefs":["PMID:11133968","PMID:12624192","PMID:10572114","GOC:cilia","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, rod","termid":"GO:0030694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, proximal rod","synonyms":[{"name":"flagellar basal body, proximal rod","type":"exact"},{"name":"flagellin-based flagellum basal body, proximal rod","type":"exact"}],"termid":"GO:0009429"}


id: MONDO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with neurological involvement (obsolete MONDO:0018284)","secondary_identifiers":["Orphanet:371047"],"synonyms":[{"name":"CDG with neurological involvement","type":"exact"}],"termid":"MONDO:0018284","xrefs":{"Monarch":{"xref_id":"0018284"}}}


id: PBO:0071620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 38","termid":"PBO:0071620"}


id: PATO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth two or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parity","termid":"PATO:0002370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiparous","termid":"PATO:0002369"}


id: GO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + Na+(out) = nucleoside(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nucleoside:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-9754934","Reactome:R-HSA-9751037","Reactome:R-HSA-109530","Reactome:R-HSA-109539","GO:0008522","Reactome:R-HSA-109538"],"synonyms":[{"name":"nucleoside-sodium cotransporter activity","type":"broad"},{"name":"sodium-dependent nucleoside transporter activity","type":"broad"}],"termid":"GO:0005415"}


id: GO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+.","definition_xrefs":["EC:1.1.1.271","MetaCyc:1.1.1.271-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"GDP-L-fucose synthase activity","secondary_identifiers":["Reactome:R-HSA-6787642","RHEA:18885"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity","type":"related"},{"name":"GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)","type":"related"},{"name":"GDP-fucose synthetase activity","type":"related"}],"termid":"GO:0050577"}


id: PBO:0048474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 1","termid":"PBO:0048474"}


id: GO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the atrioventricular bundle. These cells are specialized cardiomyocytes that transmit signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"bundle of His development","termid":"GO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular bundle cell differentiation","synonyms":[{"name":"AV bundle cell differentiation","type":"exact"}],"termid":"GO:0003167"}


id: FYPO:0002463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved septated vegetative cell","termid":"FYPO:0002282"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002481"],"synonyms":[{"name":"inviable branched curved cell","type":"exact"},{"name":"inviable branched, curved cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved septated cell","type":"exact"},{"name":"inviable branched, curved vegetative cell","type":"exact"},{"name":"inviable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, curved septated cell","type":"exact"},{"name":"inviable branched, long, curved, septated cell","type":"exact"},{"name":"inviable curved branched cell","type":"exact"},{"name":"inviable curved branched elongated cell","type":"exact"},{"name":"inviable elongated branched curved cell","type":"exact"},{"name":"lethal; branched, curved, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002463"}


id: PBO:0084542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; ERP6 has a paralog, ERP1, that arose from the whole genome duplication","termid":"PBO:0084542"}


id: PBO:0074538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNCA antisense RNA 1","termid":"PBO:0074538"}


id: SO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with copper ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_copper_ion_contact_site","secondary_identifiers":["BS:00146"],"synonyms":[{"name":"Cu_contact_site","type":"exact"},{"name":"polypeptide copper ion contact site","type":"exact"}],"termid":"SO:0001096"}


id: PBO:0069729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1010, pseudogene","termid":"PBO:0069729"}


id: PBO:0060717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA6 divergent transcript","termid":"PBO:0060717"}


id: SO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type II (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, +80 degrees < psi +120 degrees < +180 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_two","secondary_identifiers":["BS:00204"],"synonyms":[{"name":"asx turn left handed type two","type":"exact"},{"name":"asx_turn_iil","type":"exact"}],"termid":"SO:0001130"}


id: PATO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000738 enzyme function value (obsolete PATO:0000738)","termid":"PATO:0000738"}


id: GO:0097393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of telomeric repeat-containing RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.","definition_xrefs":["PMID:22139915","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"telomeric repeat-containing RNA transcription","synonyms":[{"name":"TERRA transcription","type":"exact"}],"termid":"GO:0097393"}


id: GO:0031305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial inner membrane (obsolete GO:0031305)","synonyms":[{"name":"integral to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031305"}


id: MONDO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A genetic disease that is the result of one or more abnormal alleles and may be dominant (a single copy of the abnormal allele is sufficient to give rise to the disease), semi-dominant, or recessive (requiring both copies of the gene to have an abnormal allele).","definition_xrefs":["DOID:0050177","DO:wk,ls"],"gene_count":0,"genotype_count":0,"name":"obsolete monogenic disease (obsolete MONDO:0000275)","termid":"MONDO:0000275","xrefs":{"Monarch":{"xref_id":"0000275"}}}


id: GO:1905015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1665486"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of isoleucine-tRNA ligase activity (obsolete GO:1905015)","synonyms":[{"name":"regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"regulation of isoleucine translase activity","type":"exact"},{"name":"regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905015"}


id: FYPO:0004565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of pheromone response genes is increased. Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:mah","PMID:15580593","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased transcription of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased transcription of pheromone response gene mRNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004565"}


id: PBO:0089465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Pot1","termid":"PBO:0089465"}


id: PR:Q10242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gluconokinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00941","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.12","secondary_identifiers":["UniProtKB:Q10242"],"synonyms":[{"name":"Spom972h-IDNK","type":"exact"},{"name":"gluconate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10242"}


id: GO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-threonine to form peptidyl-L-threonine methyl ester.","definition_xrefs":["RESID:AA0507"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-threonine methyl ester biosynthetic process from peptidyl-threonine (obsolete GO:0044608)","synonyms":[{"name":"peptidyl-threonine esterification","type":"exact"}],"termid":"GO:0044608"}


id: SO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region immediately adjacent to a promoter which may or may not contain transcription factor binding sites.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_flanking_region","synonyms":[{"name":"promoter flanking region","type":"exact"}],"termid":"SO:0001952"}


id: MONDO:0700145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant lymphoproliferative disorder that affects dogs. It is characterized by the clonal proliferation of B- or T-lymphocytes in the lymph nodes, bone marrow, and/or extranodal sites.","definition_xrefs":["NCIT:C128121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine lymphoma","secondary_identifiers":["OMIA:001733-9615"],"termid":"MONDO:0700145","xrefs":{"Monarch":{"xref_id":"0700145"}}}


id: FYPO:0006625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-4,5-bisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006625"}


id: MONDO:0033534
data:
  {"annotated_genes":["SJAG_04378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87203],"is_not":false,"summary":null,"term":"MONDO:0033534"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 46","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1752252","OMIM:618952","UMLS:C5436466","DOID:0112115"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 46","type":"related"},{"name":"COXPD46","type":"related"},{"name":"combined oxidative phosphorylation defiency 46","type":"exact"}],"termid":"MONDO:0033534","terms_by_termid":{"MONDO:0033534":null},"xrefs":{"Monarch":{"xref_id":"0033534"}}}


id: MONDO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","secondary_identifiers":["UMLS:C1855470","OMIM:247800","MEDGEN:340877","MESH:C565427"],"synonyms":[{"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","type":"exact"}],"termid":"MONDO:0009541","xrefs":{"Monarch":{"xref_id":"0009541"}}}


id: GO:0047285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-glycoside + UDP-D-xylose = flavonol 3-O-D-xylosylglycoside + UDP.","definition_xrefs":["MetaCyc:2.4.2.35-RXN","EC:2.4.2.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"flavonol-3-O-glycoside xylosyltransferase activity","secondary_identifiers":["RHEA:19701"],"synonyms":[{"name":"UDP-D-xylose:flavonol-3-O-glycoside 2''-O-beta-D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047285"}


id: PBO:0077869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 4","termid":"PBO:0077869"}


id: FYPO:0007340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to a larger portion of the chromosome than normal in the euchromatic regions.","definition_xrefs":["PomBase:mah","PMID:18957202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased spatial extent of protein localization to euchromatin","synonyms":[{"name":"increased spatial extent of protein localisation to euchromatin","type":"exact"},{"name":"increased spatial extent of protein localization to euchromatin during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of protein localization to euchromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007340"}


id: PBO:0076912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2A antisense RNA 1","termid":"PBO:0076912"}


id: PBO:0058139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-1","termid":"PBO:0058139"}


id: PBO:0030864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization","termid":"PBO:0030864"}


id: GO:0075097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075097)","termid":"GO:0075097"}


id: PATO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the addition of a phosphate (PO4) group to the bearer.","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation","termid":"PATO:0002262"}


id: PBO:0081029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11A","termid":"PBO:0081029"}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: MONDO:0000927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurosyphilis","termid":"MONDO:0004944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymptomatic neurosyphilis","secondary_identifiers":["MEDGEN:102259","icd11.foundation:453651926","ICD9:094.3","SCTID:37754005","UMLS:C0153167","ICD10CM:A52.2","DOID:10035"],"termid":"MONDO:0000927","xrefs":{"Monarch":{"xref_id":"0000927"}}}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["PMID:23496142","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: PBO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in autophagy Atg18a","termid":"PBO:0001883"}


id: MONDO:0015281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial standstill is a rare cardiac rhythm disease with a few familial and sporadic cases described to date that is characterized by a transient or permanent absence of electrical and mechanical atrial activity. Electrocardiographic findings include bradycardia, ectopic supraventricular rhythms, lack of atrial excitability and absent P waves.","definition_xrefs":["Orphanet:1344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial standstill","secondary_identifiers":["SCTID:450919004","ICD9:426.6","MESH:C563984","UMLS:C0541782","GARD:16564","icd11.foundation:483869734","MEDGEN:639047"],"synonyms":[{"name":"atrial cardiomyopathy with heart block","type":"exact"}],"termid":"MONDO:0015281","xrefs":{"Monarch":{"xref_id":"0015281"}}}


id: PBO:0000546
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Mei4","termid":"PBO:0000546"}


id: PBO:0005835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THADA ortholog","termid":"PBO:0005835"}


id: PBO:0043892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIM1 divergent transcript","termid":"PBO:0043892"}


id: GO:0034388
data:
  {"annotated_genes":["SJAG_00572","SJAG_00245","SJAG_04069","SJAG_02300","SJAG_00538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73158,73479,75364,78655,81550],"is_not":false,"summary":null,"term":"GO:0034388"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome and can interact directly with the 5' External Transcribed Spacer (ETS) of the full length pre-rRNA transcript. In S. cerevisiae, it sediments at 25-30 S and is composed of Pwp2p, Dip2p, Utp21p, Utp13p, Utp18p, and Utp6p.","definition_xrefs":["PMID:15231838","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00245":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_02300":null,"SJAG_04069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0005575","GO:0030684","GO:0032991"],"is_obsolete":false,"name":"Pwp2p-containing subcomplex of 90S preribosome","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"25-30 S subcomplex of 90S preribosome","type":"exact"},{"name":"UTP-B complex","type":"exact"}],"termid":"GO:0034388","terms_by_termid":{"GO:0034388":null}}


id: MONDO:0850065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal-onset severe multisystemic autoinflammatory disease with increased IL18","secondary_identifiers":["Orphanet:619363","MEDGEN:1863412","UMLS:C5925147","GARD:22462"],"termid":"MONDO:0850065","xrefs":{"Monarch":{"xref_id":"0850065"}}}


id: MONDO:0004989
data:
  {"annotated_genes":["SJAG_02460","SJAG_04394","SJAG_03453","SJAG_00079","SJAG_01410","SJAG_03720","SJAG_02426","SJAG_04206","SJAG_00757","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88035,88037,89187,88036,88038,89186,89188,89189,88039,89190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"}]},"cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the breast","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03720":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000305","UMLS:C0678222","SCTID:254838004","NCIT:C4872","MEDGEN:146260","DOID:3459"],"synonyms":[{"name":"breast cancer","type":"broad"},{"name":"breast cancer, NOS","type":"broad"},{"name":"breast carcinoma","type":"exact"},{"name":"cancer of breast","type":"broad"},{"name":"cancer of the breast","type":"broad"},{"name":"cancer, breast","type":"broad"},{"name":"carcinoma of breast","type":"exact"},{"name":"carcinoma of the breast","type":"exact"},{"name":"mammary carcinoma","type":"exact"}],"termid":"MONDO:0004989","terms_by_termid":{"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0004989"}}}


id: PBO:0116763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN2 antisense RNA 1","termid":"PBO:0116763"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: PBO:0083782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein, constituent of 66S pre-ribosomal particles; interacts with proteins involved in ribosomal biogenesis and cell polarity; member of the SURF-6 family","termid":"PBO:0083782"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: GO:0015378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + Cl-(out) = Na+(in) + Cl-(in).","definition_xrefs":["TC:2.A.30.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion:sodium symporter activity","termid":"GO:0015373"},{"relation_name":"is_a","term_name":"chloride:monoatomic cation symporter activity","termid":"GO:0015377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium:chloride symporter activity","secondary_identifiers":["Reactome:R-HSA-426130","Reactome:R-HSA-5623705"],"termid":"GO:0015378"}


id: MONDO:0006039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral or bacterial infectious process affecting the large intestine.","definition_xrefs":["NCIT:C78359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"infectious colitis","secondary_identifiers":["EFO:1000035","UMLS:C0277524","MEDGEN:75798","SCTID:39341005"],"synonyms":[{"name":"infectious colitis","type":"exact"}],"termid":"MONDO:0006039","xrefs":{"Monarch":{"xref_id":"0006039"}}}


id: PBO:0066962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 264","termid":"PBO:0066962"}


id: PBO:0040542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 1","termid":"PBO:0040542"}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: PBO:0056942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-2","termid":"PBO:0056942"}


id: GO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ear development","synonyms":[{"name":"hearing organ development","type":"exact"}],"termid":"GO:0043583"}


id: FYPO:0005247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing melibiose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on melibiose carbon source","synonyms":[{"name":"increased growth on melibiose carbon source","type":"broad"},{"name":"increased vegetative cell growth on melibiose carbon source","type":"exact"}],"termid":"FYPO:0005247"}


id: FYPO:0004242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic S phase","synonyms":[{"name":"reduced protein kinase activity during mitotic S phase","type":"exact"}],"termid":"FYPO:0004242"}


id: MONDO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1-related developmental delay-seizures-movement disorder spectrum","secondary_identifiers":["UMLS:C5680303","ICD10CM:F84.8","GARD:22369","Orphanet:592564","MEDGEN:1830103"],"synonyms":[{"name":"GNAO1-related spectrum","type":"exact"}],"termid":"MONDO:0035660","xrefs":{"Monarch":{"xref_id":"0035660"}}}


id: PBO:0078205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-7 (non-functional)","termid":"PBO:0078205"}


id: PBO:0043153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 21","termid":"PBO:0043153"}


id: PBO:0003824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.41","termid":"PBO:0003824"}


id: GO:0015305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (lactose or galactose)(out) + H+(out) = (lactose or galactose)(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.9"],"gene_count":0,"genotype_count":0,"name":"obsolete lactose, galactose:proton symporter activity (obsolete GO:0015305)","synonyms":[{"name":"lactose, galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:proton symporter activity","type":"exact"},{"name":"lactose,galactose:proton symporter activity","type":"exact"}],"termid":"GO:0015305"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: GO:0042907
data:
  {"annotated_genes":["SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81736],"is_not":false,"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of xanthine from one side of a membrane to the other. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"xanthine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042907","terms_by_termid":{"GO:0042907":null}}


id: PBO:0051612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 beta","termid":"PBO:0051612"}


id: MOD:01608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-(L-isoglutamyl)-L-lysine. This is not an isopeptide cross-link.","definition_xrefs":["RESID:AA0505","PubMed:19620981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-6-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"5-glutamyl N2-lysine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-lysine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"N2-(gamma-glutamyl)lysine","type":"exact"},{"name":"alpha-(gamma-glutamyl)lysine","type":"exact"},{"name":"gamma-glutamyl N2-lysine","type":"exact"}],"termid":"MOD:01608"}


id: GO:0140462
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93236],"is_not":false,"summary":null,"term":"GO:0140462"}]},"cv_name":"biological_process","definition":"The organization of chromatin into heterochromatin at the pericentric region of a chromosome.","definition_xrefs":["PMID:26744419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"pericentric heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140462","terms_by_termid":{"GO:0140462":null}}


id: MONDO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare squamous cell carcinoma that arises from the cornea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"cornea cancer","termid":"MONDO:0003802"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"cornea squamous cell carcinoma","secondary_identifiers":["UMLS:C0346366","MEDGEN:91102","SCTID:255008003","NCIT:C4552","DOID:13538"],"synonyms":[{"name":"cornea epidermoid carcinoma","type":"exact"},{"name":"cornea squamous cell carcinoma","type":"exact"},{"name":"corneal epidermoid carcinoma","type":"exact"},{"name":"corneal squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of cornea","type":"exact"},{"name":"epidermoid carcinoma of the cornea","type":"exact"},{"name":"squamous cell carcinoma of cornea","type":"exact"},{"name":"squamous cell carcinoma of the cornea","type":"exact"}],"termid":"MONDO:0001740","xrefs":{"Monarch":{"xref_id":"0001740"}}}


id: GO:0160150
data:
  {"annotated_genes":["SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108202],"is_not":false,"summary":null,"term":"GO:0160150"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(13) in tRNA = pseudouridine(13) in tRNA.","definition_xrefs":["EC:5.4.99.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0140098","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA pseudouridine(13) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42540"],"termid":"GO:0160150","terms_by_termid":{"GO:0160150":null}}


id: MONDO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.","definition_xrefs":["NCIT:C3042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis","secondary_identifiers":["MEDGEN:8836","SCTID:723976005","UMLS:C0016048","EFO:0000497"],"synonyms":[{"name":"fibromatosis","type":"exact"}],"termid":"MONDO:0005031","xrefs":{"Monarch":{"xref_id":"0005031"}}}


id: GO:0097560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.","definition_xrefs":["GOC:giardia","ISBN:9780124260207","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left caudal flagellum","synonyms":[{"name":"left caudal cilium","type":"exact"}],"termid":"GO:0097560"}


id: _global:increased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_magnitude_relative_to","termid":"_global:increased_in_magnitude_relative_to"}


id: PBO:0072930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 10","termid":"PBO:0072930"}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: MONDO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of cardiovascular system","secondary_identifiers":["DOID:0060051"],"synonyms":[{"name":"cardiovascular system autoimmune disease","type":"exact"},{"name":"cardiovascular system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000603","xrefs":{"Monarch":{"xref_id":"0000603"}}}


id: PBO:0079475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinkle mtDNA helicase","termid":"PBO:0079475"}


id: PBO:0086812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YJR115W has a paralog, ECM13, that arose from the whole genome duplication","termid":"PBO:0086812"}


id: SO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified valine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_valine","secondary_identifiers":["MOD:00920"],"synonyms":[{"name":"ModVal","type":"exact"},{"name":"modified L valine","type":"exact"},{"name":"modified L-valine","type":"exact"}],"termid":"SO:0001403"}


id: PBO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 13","termid":"PBO:0071649"}


id: MONDO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with flukes of the genus Dicrocoelium.","definition_xrefs":["MESH:D004011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicrocoeliasis","secondary_identifiers":["icd11.foundation:1114361195","ICD9:121.8","MEDGEN:3813","SCTID:105668007","DOID:1219","UMLS:C0012102"],"synonyms":[{"name":"Dicrocoelium caused disease or disorder","type":"exact"},{"name":"Dicrocoelium disease or disorder","type":"exact"},{"name":"Dicrocoelium infectious disease","type":"exact"},{"name":"disease due to Dicrocoeliidae","type":"exact"}],"termid":"MONDO:0005729","xrefs":{"Monarch":{"xref_id":"0005729"}}}


id: PR:Q9UU95
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug128 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 128 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.04c","synonyms":[{"name":"Spom972h-mug128","type":"exact"}],"termid":"PR:Q9UU95"}


id: PBO:0079418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 1","termid":"PBO:0079418"}


id: PBO:0047322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU ubiquitin like and ribosomal protein S30 fusion","termid":"PBO:0047322"}


id: GO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"cellular response to acid chemical","termid":"GO:0071229"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water stimulus","termid":"GO:0071462"}


id: PBO:0005115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8 (predicted)","termid":"PBO:0005115"}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: PBO:0051925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 7","termid":"PBO:0051925"}


id: GO:2000343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904209"],"synonyms":[{"name":"positive regulation of CCL2 secretion","type":"exact"},{"name":"positive regulation of CXCL2 production","type":"exact"},{"name":"positive regulation of MIP-2 production","type":"exact"},{"name":"positive regulation of MIP2 production","type":"exact"},{"name":"positive regulation of SCYB2 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000343"}


id: MONDO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 20p is a chromosomal disorder resulting from duplication of all or part of the short arm of chromosome 20. It is mostly characterized by normal growth, mild to moderate intellectual disability, speech delay, poor coordination and evocative facial features.","definition_xrefs":["Orphanet:261318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of chromosome 20","termid":"MONDO:0016938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 20p","secondary_identifiers":["GARD:5333","MEDGEN:418939","ICD9:758.5","UMLS:C2930888","MESH:C535371","SCTID:111311004"],"synonyms":[{"name":"20p duplication","type":"related"},{"name":"20p trisomy","type":"related"},{"name":"Duplication 20p","type":"related"},{"name":"Duplication of 20p","type":"exact"},{"name":"chromosome 20p duplication","type":"related"},{"name":"dup(20p)","type":"exact"},{"name":"partial duplication of chromosome 20p","type":"exact"},{"name":"partial duplication of the short arm of chromosome 20","type":"exact"},{"name":"partial trisomy 20p","type":"related"},{"name":"partial trisomy of chromosome 20p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 20","type":"exact"},{"name":"trisomy 20p","type":"exact"},{"name":"trisomy type 20p","type":"exact"}],"termid":"MONDO:0016844","xrefs":{"Monarch":{"xref_id":"0016844"}}}


id: PBO:0055827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 2","termid":"PBO:0055827"}


id: PBO:0041474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 54","termid":"PBO:0041474"}


id: FYPO:0001631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular leucine level","termid":"FYPO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar leucine level","synonyms":[{"name":"normal level of leucine in vacuole","type":"exact"},{"name":"normal vacuolar L-leucine level","type":"exact"},{"name":"normal vacuolar leucine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar leucine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001631"}


id: GO:0060457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of digestive system process","termid":"GO:0060457"}


id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: PBO:0064505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit F","termid":"PBO:0064505"}


id: PBO:0054491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1891","termid":"PBO:0054491"}


id: PBO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPAse with a role in RNA polymerase localization (predicted)","termid":"PBO:0017837"}


id: PBO:0013459
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol DeHydrogenase","termid":"PBO:0013459"}


id: GO:0102460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol-3-gentiobioside + UDP-L-rhamnose = H+ + kaempferol-3-O-gentiobioside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102460)","termid":"GO:0102460"}


id: GO:0071177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071177"}


id: GO:0005964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a.","definition_xrefs":["PMID:1370475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"phosphorylase kinase complex","termid":"GO:0005964"}


id: GO:1900419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of alcohol catabolic process","termid":"GO:1900419"}


id: PBO:0088522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd4","termid":"PBO:0088522"}


id: PBO:0076383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 1","termid":"PBO:0076383"}


id: MONDO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete appendix adenocarcinoma (obsolete MONDO:0002704)","termid":"MONDO:0002704","xrefs":{"Monarch":{"xref_id":"0002704"}}}


id: PBO:0078586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM59-IFT80 readthrough (NMD candidate)","termid":"PBO:0078586"}


id: MONDO:0009192
data:
  {"annotated_genes":["SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87526,87527],"is_not":false,"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"Wolcott-Rallison syndrome (WRS) is a very rare genetic disease, characterized by permanent neonatal diabetes mellitus (PNDM) with multiple epiphyseal dysplasia and other clinical manifestations, including recurrent episodes of acute liver failure.","definition_xrefs":["Orphanet:1667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Wolcott-Rallison syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C131007","MESH:C536739","DOID:0090060","icd11.foundation:2096915129","MEDGEN:140926","GARD:5589","OMIM:226980","SCTID:254066006","UMLS:C0432217"],"synonyms":[{"name":"IDDM-MED syndrome","type":"related"},{"name":"Iddm-Med syndrome","type":"related"},{"name":"MED-IDDM syndrome","type":"related"},{"name":"Med-Iddm syndrome","type":"related"},{"name":"WRS","type":"exact"},{"name":"Wolcott Rallison syndrome","type":"related"},{"name":"Wolcott-Rallison syndrome","type":"exact"},{"name":"early-onset diabetes mellitus with multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple with early-onset diabetes mellitus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with early-onset diabetes mellitus","type":"related"}],"termid":"MONDO:0009192","terms_by_termid":{"MONDO:0009192":null},"xrefs":{"Monarch":{"xref_id":"0009192"}}}


id: PBO:0026629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_MCB_promoters_during_vegetative_growth","termid":"PBO:0026629"}


id: MONDO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"placenta praevia","termid":"MONDO:0005918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low implantation of placenta","secondary_identifiers":["SCTID:7792000","UMLS:C0156617","DOID:1677","ICD9:641.0","MEDGEN:510322"],"termid":"MONDO:0002077","xrefs":{"Monarch":{"xref_id":"0002077"}}}


id: GO:1990236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the proteasome core complex (AKA core particle (CP)) from the cytoplasm into the nucleus.","definition_xrefs":["GOC:rb","GOC:dos","PMID:23982732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0006913"],"is_obsolete":false,"name":"proteasome core complex import into nucleus","termid":"GO:1990236"}


id: PBO:0065575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone","termid":"PBO:0065575"}


id: GO:1990393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, at least composed of CUL7, CCDC8 and OBSL1, that is required for maintaining microtubule and genome integrity.","definition_xrefs":["PMID:24793695","PMID:24793696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"3M complex","termid":"GO:1990393"}


id: MONDO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival disease (obsolete MONDO:0002932)","termid":"MONDO:0002932","xrefs":{"Monarch":{"xref_id":"0002932"}}}


id: PBO:0089587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex and succinate dehydrogenase (SDH) anchor subunit Tim18","termid":"PBO:0089587"}


id: PBO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snoR69b (predicted)","termid":"PBO:0002391"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: PBO:0088611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim10","termid":"PBO:0088611"}


id: MONDO:0008310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hutchinson-Gilford progeria syndrome is a rare, fatal, autosomal dominant and premature aging disease, beginning in childhood and characterized by growth reduction, failure to thrive, a typical facial appearance (prominent forehead, protuberant eyes, thin nose with a beaked tip, thin lips, micrognathia and protruding ears) and distinct dermatologic features (generalized alopecia, aged-looking skin, sclerotic and dimpled skin over the abdomen and extremities, prominent cutaneous vasculature, dyspigmentation, nail hypoplasia and loss of subcutaneous fat).","definition_xrefs":["Orphanet:740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"},{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"Hutchinson-Gilford progeria syndrome","secondary_identifiers":["NANDO:1201007","NORD:1257","SCTID:238870004","NANDO:2200833","NCIT:C34951","ICD9:259.8","MEDGEN:46123","UMLS:C0033300","GARD:7467","DOID:3911","OMIM:176670","MedDRA:10036794"],"synonyms":[{"name":"HGPS","type":"exact"},{"name":"Hutchinson Gilford progeria syndrome","type":"related"},{"name":"Hutchinson Gilford syndrome","type":"exact"},{"name":"Hutchinson-Gilford disease","type":"exact"},{"name":"Hutchinson-Gilford progeria","type":"exact"},{"name":"Hutchinson-Gilford progeria syndrome","type":"exact"},{"name":"premature senility syndrome","type":"exact"},{"name":"progeria","type":"broad"},{"name":"progeria syndrome, childhood-onset","type":"related"}],"termid":"MONDO:0008310","xrefs":{"Monarch":{"xref_id":"0008310"}}}


id: FYPO:0000658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA binding","synonyms":[{"name":"reduced DNA binding","type":"exact"}],"termid":"FYPO:0000658"}


id: GO:0098761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-7","termid":"GO:0098760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-7","synonyms":[{"name":"cellular response to IL-7","type":"exact"}],"termid":"GO:0098761"}


id: FYPO:0005498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription from CRE promoter","termid":"FYPO:0005495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"expression of CRE target genes increased during cellular response to miconazole","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0005498"}


id: PBO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_targeting_to_vacuole","termid":"PBO:0030275"}


id: GO:0090596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:kmv","ISBN:978-0199210893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ morphogenesis","termid":"GO:0090596"}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: MONDO:0026771
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87728],"is_not":false,"summary":null,"term":"MONDO:0026771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 85, with or without midline brain defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1708832","OMIM:301044","DOID:0070380","UMLS:C5393312"],"synonyms":[{"name":"DEE85, with or without midline brain defects","type":"exact"},{"name":"EIEE85","type":"exact"},{"name":"developmental and epileptic encephalopathy 85, with or without midline brain defects, X-linked dominant","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 85, with or without midline brain defects","type":"exact"}],"termid":"MONDO:0026771","terms_by_termid":{"MONDO:0026771":null},"xrefs":{"Monarch":{"xref_id":"0026771"}}}


id: MONDO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chordoid glioma (obsolete MONDO:0002774)","termid":"MONDO:0002774","xrefs":{"Monarch":{"xref_id":"0002774"}}}


id: PBO:0057343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 527","termid":"PBO:0057343"}


id: GO:0051014
data:
  {"annotated_genes":["SJAG_03025","SJAG_03380","SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71864,102861],"is_not":false,"summary":null,"term":"GO:0051014"},{"annotations":[76277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"The process in which an actin filament is broken down into smaller filaments.","definition_xrefs":["PMID:14657234","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based process","termid":"GO:0030029"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03380":null,"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament severing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"F-actin severing","type":"exact"},{"name":"actin filament severing activity","type":"related"},{"name":"barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:0051014","terms_by_termid":{"GO:0051014":null,"GO:0071846":null}}


id: GO:0140860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R,4R)-4,2'-dihydroxyisoflavan + NADP+ = a (3R)-2'-hydroxyisoflavanone + H+ + NADPH.","definition_xrefs":["PMID:7625843","RHEA:56284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(3R)-2'-hydroxyisoflavanone reductase (NADP+) activity","synonyms":[{"name":"vestitone reductase activity","type":"narrow"}],"termid":"GO:0140860"}


id: PBO:0058019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3945","termid":"PBO:0058019"}


id: PBO:0046906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member G","termid":"PBO:0046906"}


id: GO:1903440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of amylin receptor activity.","definition_xrefs":["PMID:18687416","GO_REF:0000088","PMID:12037140","GOC:TermGenie","GOC:bhm","PMID:10871296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"amylin receptor complex","termid":"GO:1903440"}


id: GO:0019597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including benzoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate metabolic process","termid":"GO:0018874"},{"relation_name":"is_a","term_name":"mandelate catabolic process","termid":"GO:0019596"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mandelate catabolic process to benzoate","synonyms":[{"name":"(R)-mandelate breakdown to benzoate","type":"exact"},{"name":"(R)-mandelate degradation to benzoate","type":"exact"}],"termid":"GO:0019597"}


id: MONDO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurofibroma characterized by the presence of structures which resemble Vater-Pacini corpuscles.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pacinian tumor","secondary_identifiers":["DOID:2669","ICD9:215.9","NCIT:C4328","MEDGEN:87273","SCTID:404033003","ICDO:9507/0","UMLS:C0334599"],"synonyms":[{"name":"Pacinian neurofibroma","type":"exact"},{"name":"Pacinian tumor (morphologic abnormality)","type":"exact"},{"name":"Pacinian tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002383","xrefs":{"Monarch":{"xref_id":"0002383"}}}


id: MONDO:0006525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory skin condition caused by an immune response to direct contact between the skin and an allergen. It consists of a delayed type of allergic reaction at the affected site with resulting red, swollen, and blistered skin that may itch or leak.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"contact dermatitis","termid":"MONDO:0005480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"allergic contact dermatitis","secondary_identifiers":["MESH:D017449","SCTID:238575004","MEDGEN:102474","ICD10CM:L23","ICD9:692.9","EFO:1000668","NCIT:C26998","UMLS:C0162820","DOID:3042","icd11.foundation:2020673786"],"synonyms":[{"name":"allergic contact dermatitis","type":"exact"},{"name":"allergic form of contact dermatitis","type":"exact"}],"termid":"MONDO:0006525","xrefs":{"Monarch":{"xref_id":"0006525"}}}


id: PBO:0030958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0030958"}


id: PBO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 1","termid":"PBO:0043695"}


id: GO:1990017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a tanycyte that lies within the ependyma and contains the nucleus. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["NIF_Subcellular:sao401910342","ISBN:0195065719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic portion of tanycyte","synonyms":[{"name":"somatic portion","type":"broad"}],"termid":"GO:1990017"}


id: PBO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Taz1","termid":"PBO:0000052"}


id: PBO:0059794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 20","termid":"PBO:0059794"}


id: PBO:0076770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 9","termid":"PBO:0076770"}


id: PBO:0064084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain containing 1","termid":"PBO:0064084"}


id: PBO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght3","termid":"PBO:0000118"}


id: PBO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25B","termid":"PBO:0042412"}


id: FYPO:0008070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 in centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19394293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}


id: PBO:0075752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit alpha","termid":"PBO:0075752"}


id: PBO:0111902
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SANT subfamily","termid":"PBO:0111902"}


id: MONDO:0020267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic keratinization disorder associated with ocular features (obsolete MONDO:0020267)","secondary_identifiers":["Orphanet:98697"],"termid":"MONDO:0020267","xrefs":{"Monarch":{"xref_id":"0020267"}}}


id: PBO:0049450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 4","termid":"PBO:0049450"}


id: PBO:0012235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archaeal histone family protein","termid":"PBO:0012235"}


id: PBO:0065278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2B","termid":"PBO:0065278"}


id: PBO:0068384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF185 antisense RNA 1","termid":"PBO:0068384"}


id: PBO:0091159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2","termid":"PBO:0091159"}


id: PBO:0091418
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELOVL3","termid":"PBO:0091418"}


id: MOD:00372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues with a carbon-carbon bond to form 3'-(3'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["PubMed:14249161","DeltaMass:0","PubMed:637884","PubMed:8702710","PubMed:8937563","RESID:AA0367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(3'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-(6,6'-dihydroxybiphenyl-3,3'-diyl)bis(2-aminopropanoic acid)","type":"exact"},{"name":"3'-(L-tyros-3'-yl)-L-tyrosine","type":"exact"},{"name":"3,3'-BiTyr (Crosslink)","type":"exact"},{"name":"6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-bis(2-aminopropanoic acid)","type":"exact"},{"name":"alpha,alpha'-diamino-6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-dipropanoic acid","type":"exact"},{"name":"bityrosine","type":"exact"},{"name":"o,o-dityrosine","type":"exact"}],"termid":"MOD:00372"}


id: GO:0023035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cell surface receptor CD40 to one of its physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mtg_signal","PMID:11348017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CD40 signaling pathway","synonyms":[{"name":"CD40 signalling pathway","type":"exact"}],"termid":"GO:0023035"}


id: GO:1990760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides.","definition_xrefs":["PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensor activity","termid":"GO:0005034"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0038023","GO:0098772","GO:0140299","GO:0022857"],"is_obsolete":false,"name":"osmolarity-sensing monoatomic cation channel activity","synonyms":[{"name":"osmolarity-sensing cation channel activity","type":"broad"}],"termid":"GO:1990760"}


id: PBO:0067767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 67","termid":"PBO:0067767"}


id: SO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in mitochondrial sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_gene"],"synonyms":[{"name":"mitochondrial gene","type":"exact"},{"name":"mt gene","type":"exact"}],"termid":"SO:0000088"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:11891195","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: FYPO:0007230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in the form of a spindle, i.e. both cell tips are narrower and more pointed than normal.","definition_xrefs":["PMID:22137473","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"spindle-shaped cell","synonyms":[{"name":"spindle-shaped cell during mitotic cell cycle","type":"related"},{"name":"spindle-shaped cell during vegetative growth","type":"exact"},{"name":"spindle-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007230"}


id: PBO:0076172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 3","termid":"PBO:0076172"}


id: PBO:0091441
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not appear to be the ortholog of S. cerevisiae CYB2, missing the N-term cytochrome B2 domain","termid":"PBO:0091441"}


id: MONDO:0018004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia without down syndrome","secondary_identifiers":["GARD:21490","MEDGEN:1843134","Orphanet:329469","UMLS:C5679860"],"synonyms":[{"name":"non-DS-AMKL","type":"exact"}],"termid":"MONDO:0018004","xrefs":{"Monarch":{"xref_id":"0018004"}}}


id: GO:0062124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with 4-hydroxybutyrte to initiate a change in cell activity.","definition_xrefs":["PMID:17197387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybutyrate receptor activity","synonyms":[{"name":"gamma-hydroxybutyrate receptor activity","type":"exact"}],"termid":"GO:0062124"}


id: PBO:0030247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_freezing","termid":"PBO:0030247"}


id: MONDO:0023158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fitz-Hugh-Curtis syndrome (FHCS) is a condition in which a woman has swelling of the tissue covering the liver as a result of having pelvic inflammatory disease (PID). Symptoms most often include pain in the upper right abdomen just below the ribs, fever, nausea, or vomiting. The symptoms of pelvic inflammatory disease - pain in the lower abdomen and vaginal discharge -are oftenpresent as well. FHCS is usually caused by an infection of chlamydia or gonorrhea that leads to PID; it is not known why PIDprogresses toFHCS in some women. Fitz-Hugh-Curtis syndrome is treatedwith antibiotics.","definition_xrefs":["GARD:0006452"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chlamydia infectious disease","termid":"MONDO:0021697"},{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fitz-Hugh-Curtis syndrome","secondary_identifiers":["MESH:C537936","SCTID:237041005","UMLS:C0549148","MEDGEN:639814"],"synonyms":[{"name":"gonococcal perihepatitis","type":"narrow"},{"name":"perihepatitis syndrome","type":"related"}],"termid":"MONDO:0023158","xrefs":{"Monarch":{"xref_id":"0023158"}}}


id: MONDO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myiasis (obsolete MONDO:0005869)","termid":"MONDO:0005869","xrefs":{"Monarch":{"xref_id":"0005869"}}}


id: GO:0033452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GUG codon-amino acid adaptor activity","synonyms":[{"name":"GTG codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033452"}


id: GO:0106215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus.","definition_xrefs":["PMID:26195667","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"negatively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106215"}


id: PBO:0073285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 6","termid":"PBO:0073285"}


id: PBO:0034187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_orthology_relationship_with","termid":"PBO:0034187"}


id: PBO:0038656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 6, lysophosphatidic","termid":"PBO:0038656"}


id: SO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A three prime RACE (Rapid Amplification of cDNA Ends) clone is a cDNA clone copied from the 3' end of an mRNA (using a poly-dT primer to capture the polyA tail and a gene-specific or randomly primed 5' primer), and spliced into a vector for propagation in a suitable host.","definition_xrefs":["modENCODE:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_RACE_clone","synonyms":[{"name":"3' RACE clone","type":"related"}],"termid":"SO:0001433"}


id: PBO:0062925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y12","termid":"PBO:0062925"}


id: PBO:0004380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt7","termid":"PBO:0004380"}


id: GO:2000249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin cytoskeleton reorganization (obsolete GO:2000249)","synonyms":[{"name":"regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000249"}


id: GO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of chloroplast outer membrane (obsolete GO:0031358)","synonyms":[{"name":"intrinsic to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031358"}


id: FYPO:0001317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"},{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during vegetative growth","secondary_identifiers":["FYPO:0002938"],"synonyms":[{"name":"normal RNA level during mitotic cell cycle","type":"related"},{"name":"normal cellular RNA level during vegetative growth","type":"exact"},{"name":"normal mRNA accumulation","type":"related"},{"name":"normal mRNA level during mitotic cell cycle","type":"related"},{"name":"normal mRNA level during vegetative growth","type":"narrow"},{"name":"normal mRNA transcript level during vegetative growth","type":"narrow"},{"name":"normal transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0001317"}


id: PBO:0027156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_asparagine_level","termid":"PBO:0027156"}


id: PBO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_guanyl-nucleotide_exchange_factor_activity","termid":"PBO:0033778"}


id: RO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"RO:0002437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}


id: PBO:0059734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 8","termid":"PBO:0059734"}


id: FYPO:0007938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tea tree oil. Cells stop growing (and may die) at a concentration of tea tree oil that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tea tree oil","termid":"FYPO:0007938"}


id: GO:0000463
data:
  {"annotated_genes":["SJAG_02275","SJAG_03789","SJAG_04492","SJAG_05190","SJAG_04669","SJAG_00752","SJAG_01581","SJAG_03425","SJAG_01366","SJAG_01606","SJAG_02374","SJAG_04108","SJAG_02894","SJAG_01551","SJAG_00722","SJAG_02427","SJAG_01821","SJAG_00749","SJAG_00882","SJAG_04289","SJAG_02830","SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62434,72124,72996,74060,74086,75106,75270,75450,75820,76612,77018,77692,79999,80518,81543,99870,99903,101984],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[106064,96870,73287,93591],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_01366":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01821":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02427":null,"SJAG_02830":null,"SJAG_02894":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000463","terms_by_termid":{"GO:0000448":null,"GO:0000463":null}}


id: PBO:0064864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 21","termid":"PBO:0064864"}


id: SO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The junction in a genome where a transposable_element has inserted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_site","termid":"SO:0000366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_insertion_site","synonyms":[{"name":"transposable element insertion site","type":"exact"}],"termid":"SO:0000368"}


id: FYPO:0003824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of caffeine and rapamycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to caffeine and rapamycin","synonyms":[{"name":"resistance to caffeine and rapamycin during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine and rapamycin during vegetative growth","type":"exact"},{"name":"resistance to caffeine and rapamycin in combination","type":"exact"},{"name":"resistant to caffeine and rapamycin","type":"exact"}],"termid":"FYPO:0003824"}


id: PBO:0000577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein (predicted)","termid":"PBO:0000577"}


id: PBO:0047929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q23.3)","termid":"PBO:0047929"}


id: GO:2001173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001173)","synonyms":[{"name":"regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001173"}


id: PBO:0046851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated via death domain","termid":"PBO:0046851"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: PBO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XII alpha 1 chain","termid":"PBO:0043580"}


id: PBO:0082017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger X-linked duplicated A","termid":"PBO:0082017"}


id: GO:0006694
data:
  {"annotated_genes":["SJAG_04217","SJAG_04499","SJAG_04018","SJAG_02044","SJAG_01307","SJAG_00717","SJAG_02982","SJAG_00624","SJAG_04810","SJAG_00370","SJAG_03750","SJAG_00413","SJAG_03018","SJAG_03509","SJAG_03929","SJAG_00453","SJAG_03531","SJAG_04270","SJAG_03715","SJAG_03235","SJAG_01474","SJAG_02719","SJAG_03249","SJAG_00770","SJAG_03598","SJAG_02855","SJAG_02104","SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72680,78271,90346,76073,81916,77914,73505,117252,109505,71606,91539,74922,82128,67109,96540,109819,73299,112077,75728,79008,111235,82102,78279,118568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[95777],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[111843],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[77267],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[107806,90435],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Steroid_metabolisms#Steroid_biosynthesis"],"synonyms":[{"name":"steroid anabolism","type":"exact"},{"name":"steroid biosynthesis","type":"exact"},{"name":"steroid formation","type":"exact"},{"name":"steroid synthesis","type":"exact"},{"name":"steroidogenesis","type":"exact"}],"termid":"GO:0006694","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:0032357
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75325],"is_not":false,"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized purine residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized DNA binding","termid":"GO:0032356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"oxidized purine DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidised purine DNA binding","type":"exact"},{"name":"oxidized purine base DNA binding","type":"exact"},{"name":"oxidized purine nucleobase DNA binding","type":"exact"}],"termid":"GO:0032357","terms_by_termid":{"GO:0032357":null}}


id: PBO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB endocytic adaptor protein","termid":"PBO:0061658"}


id: GO:0006722
data:
  {"annotated_genes":["SJAG_00624","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62532,67802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triterpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"triterpene metabolic process","type":"narrow"},{"name":"triterpene metabolism","type":"narrow"},{"name":"triterpenoid metabolism","type":"exact"}],"termid":"GO:0006722","terms_by_termid":{"GO:0016104":null}}


id: PBO:0073586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 2","termid":"PBO:0073586"}


id: GO:0099000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a contractile tail ejection system consisting of a baseplate, a central tube and an external contractile sheath. Upon binding to the host cell surface, the baseplate changes its conformation and triggers sheath contraction, driving the rigid internal tail tube through the cell envelope. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["PMID:26283379","VZ:3950","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, contractile tail mechanism","synonyms":[{"name":"viral contractile tail ejection system","type":"exact"},{"name":"viral genome ejection through host cell envelope, contractile tail mechanism","type":"related"}],"termid":"GO:0099000"}


id: FYECO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is significantly different than the standard pombe growth medium with a pH of ~5.6.","definition_xrefs":["PMID:10467002"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000128 pH (obsolete FYECO:0000128)","termid":"FYECO:0000128"}


id: GO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adrenomedullin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adrenomedullin receptor binding","synonyms":[{"name":"adrenomedullin receptor ligand","type":"narrow"}],"termid":"GO:0031700"}


id: MONDO:0013253
data:
  {"annotated_genes":["SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89196],"is_not":false,"summary":null,"term":"MONDO:0013253"}]},"cv_name":"mondo","definition":"Any hereditary breast ovarian cancer syndrome in which the cause of the disease is a mutation in the RAD51C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02708":null},"genotype_count":0,"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462009","UMLS:C3150659","OMIM:613399"],"synonyms":[{"name":"BROVCA3","type":"related"},{"name":"RAD51C hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"Rad51C hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"breast cancer, familial, susceptibility to, 3","type":"related"},{"name":"breast-ovarian cancer, familial, susceptibility to, 3","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, type 3","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in RAD51C","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in Rad51C","type":"exact"},{"name":"ovarian cancer, familial, susceptibility to, 3","type":"related"},{"name":"susceptibility to familial breast-ovarian cancer 3","type":"related"}],"termid":"MONDO:0013253","terms_by_termid":{"MONDO:0013253":null},"xrefs":{"Monarch":{"xref_id":"0013253"}}}


id: GO:0036316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the SREBP-SCAP complex is maintained in the endoplasmic reticulum and prevented from moving elsewhere. The SREBP-SCAP complex is formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP). In the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed. In the presence of sterols, the complex binds ER-resident proteins such as INSIG, which retain the complex in the ER.","definition_xrefs":["PMID:16525117","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in endoplasmic reticulum","termid":"GO:0035437"},{"relation_name":"is_a","term_name":"negative regulation of SREBP signaling pathway","termid":"GO:2000639"},{"relation_name":"part_of","term_name":"cellular response to sterol","termid":"GO:0036315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SREBP-SCAP complex retention in endoplasmic reticulum","termid":"GO:0036316"}


id: PBO:0076614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 32","termid":"PBO:0076614"}


id: PBO:0075912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 4","termid":"PBO:0075912"}


id: GO:0016721
data:
  {"annotated_genes":["SJAG_00668","SJAG_04788","SJAG_03303","SJAG_01734"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75978,58379,66218,79016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004784"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a superoxide radical (O2- or O2.-) acts as a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_04788":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on superoxide radicals as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:1.15.-.-"],"termid":"GO:0016721","terms_by_termid":{"GO:0004784":null}}


id: PBO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 25","termid":"PBO:0050208"}


id: GO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of T cell cytokine production","synonyms":[{"name":"regulation of T lymphocyte cytokine production","type":"exact"},{"name":"regulation of T-cell cytokine production","type":"exact"},{"name":"regulation of T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002724"}


id: PBO:0036522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein, implicated in cytosketon organization or vesicle-mediated transport","termid":"PBO:0036522"}


id: PBO:0002998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein (predicted)","termid":"PBO:0002998"}


id: MONDO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the larynx. The majority are carcinomas.","definition_xrefs":["NCIT:C7484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"laryngeal neoplasm","termid":"MONDO:0021071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx cancer","secondary_identifiers":["MEDGEN:2868","ICD9:161.8","DOID:2596","ICD9:161.9","UMLS:C0007107","SCTID:363429002","ICD9:161","EFO:1000354"],"synonyms":[{"name":"cancer of larynx","type":"exact"},{"name":"larynx cancer","type":"exact"},{"name":"malignant laryngeal neoplasm","type":"exact"},{"name":"malignant laryngeal tumor","type":"exact"},{"name":"malignant laryngeal tumour","type":"exact"},{"name":"malignant larynx neoplasm","type":"exact"},{"name":"malignant larynx tumor","type":"exact"},{"name":"malignant larynx tumour","type":"exact"},{"name":"malignant neoplasm of larynx","type":"exact"},{"name":"malignant neoplasm of the larynx","type":"exact"},{"name":"malignant tumor of larynx","type":"exact"},{"name":"malignant tumor of the larynx","type":"exact"},{"name":"malignant tumour of larynx","type":"exact"},{"name":"malignant tumour of the larynx","type":"exact"}],"termid":"MONDO:0002352","xrefs":{"Monarch":{"xref_id":"0002352"}}}


id: PBO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.-","termid":"PBO:0000633"}


id: GO:0050144
data:
  {"annotated_genes":["SJAG_01974"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118125],"is_not":false,"summary":null,"term":"GO:0050144"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribosyl-base1 + base2 = 2-deoxy-D-ribosyl-base2 + base1.","definition_xrefs":["EC:2.4.2.6","MetaCyc:NUCLEOSIDE-DEOXYRIBOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nucleoside deoxyribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose transferase activity","type":"related"},{"name":"nucleoside deoxyribosyltransferase I (purine nucleoside:purine deoxyribosyltransferase: strictly specific for transfer between purine bases)","type":"related"},{"name":"nucleoside deoxyribosyltransferase II [purine(pyrimidine) nucleoside:purine(pyrimidine) deoxyribosyltransferase]","type":"related"},{"name":"nucleoside trans-N-deoxyribosylase activity","type":"related"},{"name":"nucleoside:purine(pyrimidine) deoxy-D-ribosyltransferase activity","type":"related"},{"name":"purine(pyrimidine) nucleoside:purine(pyrimidine) deoxyribosyl transferase activity","type":"related"},{"name":"trans-N-deoxyribosylase activity","type":"related"},{"name":"trans-N-glycosidase activity","type":"related"},{"name":"trans-deoxyribosylase activity","type":"related"}],"termid":"GO:0050144","terms_by_termid":{"GO:0050144":null}}


id: PBO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_apoptosis","termid":"PBO:0031589"}


id: GO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate.","definition_xrefs":["EC:2.7.7.60","RHEA:13429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05633","MetaCyc:2.7.7.60-RXN","GO:0008699"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol synthase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity","type":"exact"},{"name":"CTP:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","type":"exact"},{"name":"MCT activity","type":"related"},{"name":"MEP cytidylyltransferase activity","type":"exact"}],"termid":"GO:0050518"}


id: PBO:0113090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic and mitochondrial glutathione oxidoreductase; converts oxidized glutathione to reduced glutathione; cytosolic Glr1p is the main determinant of the glutathione redox state of the mitochondrial intermembrane space; mitochondrial Glr1p has a role in resistance to hyperoxia; also detected in peroxisomes; protein abundance increases in response to DNA replication stress","termid":"PBO:0113090"}


id: GO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone biosynthetic process","synonyms":[{"name":"hormone anabolism","type":"exact"},{"name":"hormone biosynthesis","type":"exact"},{"name":"hormone formation","type":"exact"},{"name":"hormone synthesis","type":"exact"}],"termid":"GO:0042446"}


id: GO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 3 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3 complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070046"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: MONDO:0000179
data:
  {"annotated_genes":["SJAG_02791","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[88732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"}]},"cv_name":"mondo","definition":"Neu-Laxova syndrome (NLS) is a rare, multiple malformation syndrome characterized by severe intrauterine growth retardation (IUGR), severe microcephaly with a sloping forehead, severe ichthyosis (collodion baby type), and facial dysmorphism.","definition_xrefs":["Orphanet:2671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"3-phosphoglycerate dehydrogenase deficiency","termid":"MONDO:0018491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"Neu-Laxova syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:256520","icd11.foundation:893358230","GARD:102","ICD9:759.89","MEDGEN:78537","MESH:C536405","UMLS:C0265218","SCTID:77817004"],"synonyms":[{"name":"NLS","type":"related"},{"name":"Neu Laxova syndrome","type":"related"}],"termid":"MONDO:0000179","terms_by_termid":{"MONDO:0009736":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0000179"}}}


id: PBO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0000137"}


id: GO:0050579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deoxysarpagine + NADP+ = H+ + NADPH + vellosimine.","definition_xrefs":["EC:1.1.1.273","RHEA:20029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"vellosimine dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.273-RXN","KEGG_REACTION:R05827"],"synonyms":[{"name":"10-deoxysarpagine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050579"}


id: PR:O60149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps38 gene.","definition_xrefs":["UniProtKB:O60149","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.19","synonyms":[{"name":"Spom972h-vps38","type":"exact"}],"termid":"PR:O60149"}


id: MONDO:0014667
data:
  {"annotated_genes":["SJAG_05199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86923],"is_not":false,"summary":null,"term":"MONDO:0014667"}]},"cv_name":"mondo","definition":"Any fatal infantile encephalocardiomyopathy in which the cause of the disease is a mutation in the COA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal infantile encephalocardiomyopathy","termid":"MONDO:0015487"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18572","MEDGEN:903495","OMIM:616500","DOID:0080359","UMLS:C4225154"],"synonyms":[{"name":"CEMCOX3","type":"related"},{"name":"COA5 fatal infantile encephalocardiomyopathy","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome C oxidase deficiency type 3","type":"exact"},{"name":"cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 3","type":"exact"},{"name":"fatal infantile encephalocardiomyopathy caused by mutation in COA5","type":"exact"},{"name":"mitochondrial complex IV, deficiency, nuclear type 9","type":"exact"}],"termid":"MONDO:0014667","terms_by_termid":{"MONDO:0014667":null},"xrefs":{"Monarch":{"xref_id":"0014667"}}}


id: MONDO:0014856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the TRMT10C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 30","secondary_identifiers":["DOID:0111471","MEDGEN:1799028","GARD:17864","OMIM:616974","Orphanet:478042","UMLS:C5567605"],"synonyms":[{"name":"COXPD30","type":"exact"},{"name":"TRMT10C combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 30","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TRMT10C","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 30","type":"exact"}],"termid":"MONDO:0014856","xrefs":{"Monarch":{"xref_id":"0014856"}}}


id: PBO:0029819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_elongated_cells_(obsolete_FYPO:0002418)","termid":"PBO:0029819"}


id: PBO:0055041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2456","termid":"PBO:0055041"}


id: PBO:0089543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAD-superfamily hydrolase, subfamily IIA","termid":"PBO:0089543"}


id: PBO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 5","termid":"PBO:0050149"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: GO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of ecdysiostatic hormone, a peptide hormone that inhibits ecdysone secretion.","definition_xrefs":["DOI:10.1002/(SICI)1520-6327(1997)35:1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ecdysiostatic hormone activity","termid":"GO:0016087"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: MONDO:0013281
data:
  {"annotated_genes":["SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88029],"is_not":false,"summary":null,"term":"MONDO:0013281"}]},"cv_name":"mondo","definition":"COG4-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case to date by seizures, some dysmorphic features, axial hyponia, slight peripheral hypertonia and hyperreflexia.","definition_xrefs":["Orphanet:263501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"COG4-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613489","SCTID:718751000","DOID:0070262","MEDGEN:929221","GARD:12412","UMLS:C4303552"],"synonyms":[{"name":"CDG IIj","type":"related"},{"name":"CDG syndrome type IIj","type":"exact"},{"name":"CDG-IIj","type":"exact"},{"name":"CDG2J","type":"exact"},{"name":"COG4-CDG","type":"exact"},{"name":"COG4-CDG (CDG-IIj)","type":"related"},{"name":"COG4-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIj","type":"exact"},{"name":"congenital disorder of glycosylation type 2j","type":"exact"},{"name":"congenital disorder of glycosylation type IIj","type":"exact"},{"name":"congenital disorder of glycosylation, type IIj","type":"related"}],"termid":"MONDO:0013281","terms_by_termid":{"MONDO:0013281":null},"xrefs":{"Monarch":{"xref_id":"0013281"}}}


id: GO:0102456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-sinapoyl-beta-D-glucose = cyanin betaine + trans-sinapate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 5-O-glucosyltransferase (sinapoyl-glucose dependent) activity (obsolete GO:0102456)","termid":"GO:0102456"}


id: PBO:0036272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in regulation of cytoplasmic translational termination (predicted)","termid":"PBO:0036272"}


id: PR:Q9P6Q5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01122","PANTHER:PTHR11241:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.05c","secondary_identifiers":["UniProtKB:Q9P6Q5"],"synonyms":[{"name":"Spom972h-DUT","type":"exact"},{"name":"dUTP pyrophosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dUTPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q5"}


id: MONDO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 4q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 4, with highly variable phenotype typically characterized by psychomotor delay, intellectual disability, craniofacial dysmorphism (microcephaly, low-set, prominent ears, downslanting palpebral fissures, hypertelorism, epicanthic folds, broad, prominent nasal bridge, high arched and cleft palate, micro-/retrognathia), seizures, as well as tooth and digital anomalies (clinodactyly, polydactyly). Cardiac malformations, renal anomalies, cryptorchidism, hypotonia and hearing impairment have also been reported.","definition_xrefs":["Orphanet:96096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 4","termid":"MONDO:0016955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 4q","secondary_identifiers":["SCTID:763273008","UMLS:C4706362","GARD:19312","MEDGEN:1633392"],"synonyms":[{"name":"distal duplication 4q","type":"exact"},{"name":"distal trisomy type 4q","type":"exact"},{"name":"telomeric duplication 4q","type":"exact"},{"name":"trisomy 4qter","type":"exact"}],"termid":"MONDO:0019879","xrefs":{"Monarch":{"xref_id":"0019879"}}}


id: FYPO:0007463
data:
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id: GO:0052769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the glycosidic cleavage of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residue from sulfomucin, a sulfated mucin derivative.","definition_xrefs":["GOC:mengo_curators","PMID:15716424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"beta-6-sulfate-N-acetylglucosaminidase activity","synonyms":[{"name":"beta-6-SO3-N-acetylglucosaminidase activity","type":"broad"},{"name":"exosulfoglycosidase activity","type":"broad"},{"name":"sulfoglycosidase activity","type":"broad"},{"name":"sulfomucin beta-6-sulfate-N-acetylglucosaminidase activity","type":"exact"}],"termid":"GO:0052769"}


id: GO:0005840
data:
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id: GO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"flavonoid phytoalexin biosynthetic process","synonyms":[{"name":"flavonoid phytoalexin anabolism","type":"exact"},{"name":"flavonoid phytoalexin biosynthesis","type":"exact"},{"name":"flavonoid phytoalexin formation","type":"exact"},{"name":"flavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009716"}


id: PBO:0069448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 713, pseudogene","termid":"PBO:0069448"}


id: PBO:0026711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_complex_binding","termid":"PBO:0026711"}


id: GO:0005240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine receptor-associated protein (obsolete GO:0005240)","synonyms":[{"name":"glycine receptor-associated protein","type":"exact"}],"termid":"GO:0005240"}


id: PBO:0081122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3H1-type containing","termid":"PBO:0081122"}


id: PBO:0108695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein","termid":"PBO:0108695"}


id: GO:0009378
data:
  {"annotated_genes":["SJAG_02294","SJAG_02690","SJAG_05105","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72688,79838,79893,81243],"is_not":false,"summary":null,"term":"GO:0009378"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix of DNA containing four-way junctions, including Holliday junctions, driven by ATP hydrolysis.","definition_xrefs":["PMID:22723423","GOC:al","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02294":null,"SJAG_02690":null,"SJAG_03898":null,"SJAG_05105":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853","GO:0140097"],"is_obsolete":false,"name":"four-way junction helicase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1990163"],"synonyms":[{"name":"ATP-dependent Holliday junction helicase activity","type":"narrow"},{"name":"ATP-dependent four-way junction DNA helicase activity","type":"exact"},{"name":"ATP-dependent four-way junction helicase activity","type":"exact"},{"name":"Holliday junction helicase activity","type":"narrow"}],"termid":"GO:0009378","terms_by_termid":{"GO:0009378":null}}


id: PR:P36631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32C12.02","secondary_identifiers":["PR:000027539","UniProtKB:P36631"],"synonyms":[{"name":"SPBC32C12.02","type":"related"},{"name":"Spom972h-ste11","type":"exact"}],"termid":"PR:P36631"}


id: PBO:0077081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOPBP1 interacting checkpoint and replication regulator","termid":"PBO:0077081"}


id: PBO:0062666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily H member 1","termid":"PBO:0062666"}


id: PBO:0065657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRG antisense RNA 1","termid":"PBO:0065657"}


id: GO:1903744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","PMID:25329901","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle transport","termid":"GO:1902805"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"positively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"activation of anterograde synaptic vesicle transport","type":"narrow"},{"name":"up regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"up-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"upregulation of anterograde synaptic vesicle transport","type":"exact"}],"termid":"GO:1903744"}


