# terms

id: MONDO:0004794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exposure keratitis","secondary_identifiers":["MEDGEN:87383","UMLS:C0339295","SCTID:14366000","icd11.foundation:1261495652","DOID:9461","ICD9:370.34"],"synonyms":[{"name":"exposure keratoconjunctivitis","type":"exact"},{"name":"lagophthalmic keratitis","type":"exact"}],"termid":"MONDO:0004794","xrefs":{"Monarch":{"xref_id":"0004794"}}}


id: SO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of loci that can be grouped in a linear order representing the different degrees of linkage among the genes concerned.","definition_xrefs":["ISBN:038752046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linkage_group","secondary_identifiers":["http://en.wikipedia.org/wiki/Linkage_group"],"synonyms":[{"name":"linkage group","type":"exact"}],"termid":"SO:0000018"}


id: PBO:0072369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 55","termid":"PBO:0072369"}


id: GO:0033944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-galactofuranosides, releasing galactose.","definition_xrefs":["EC:3.2.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"beta-galactofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.146-RXN"],"synonyms":[{"name":"beta-D-galactofuranosidase activity","type":"related"},{"name":"beta-D-galactofuranoside hydrolase activity","type":"related"},{"name":"exo-beta-D-galactofuranosidase activity","type":"related"},{"name":"exo-beta-galactofuranosidase activity","type":"related"}],"termid":"GO:0033944"}


id: GO:0009749
data:
  {"annotated_genes":["SJAG_01254","SJAG_00574","SJAG_00472","SJAG_04312","SJAG_01754","SJAG_02444","SJAG_04026","SJAG_01699","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108468,96123,111000,107872,103793,111511,118587,117554,108818],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucose","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to glucose stimulus","type":"exact"}],"termid":"GO:0009749","terms_by_termid":{"GO:0010619":null}}


id: PBO:0053335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 184","termid":"PBO:0053335"}


id: PATO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000458 presence value (obsolete PATO:0000458)","termid":"PATO:0000458"}


id: PBO:0060646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 5","termid":"PBO:0060646"}


id: MONDO:0016605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic form of hypophosphatasia (HPP) characterized by markedly impaired bone mineralization in utero due to reduced activity of serum alkaline phosphatase (ALP) and causing stillbirth or respiratory failure within days of birth.","definition_xrefs":["Orphanet:247623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ALPL-related autosomal recessive hypophosphatasia","termid":"MONDO:0100609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"perinatal lethal hypophosphatasia","secondary_identifiers":["GARD:17191","ICD10CM:E83.3","MEDGEN:392928","UMLS:C2673477"],"synonyms":[{"name":"HPPN","type":"exact"},{"name":"hypophosphatasia, perinatal lethal","type":"related"},{"name":"perinatal lethal Rathburn disease","type":"exact"},{"name":"perinatal lethal phosphoethanolaminuria","type":"exact"}],"termid":"MONDO:0016605","xrefs":{"Monarch":{"xref_id":"0016605"}}}


id: PBO:0050106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 16","termid":"PBO:0050106"}


id: GO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + UDP-galactose = 6F-alpha-D-galactosylsucrose + UDP.","definition_xrefs":["EC:2.4.1.167","MetaCyc:2.4.1.167-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"sucrose 6F-alpha-galactotransferase activity","secondary_identifiers":["RHEA:10088"],"synonyms":[{"name":"UDP-galactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6fru-alpha-galactosyltransferase activity","type":"related"},{"name":"sucrose 6(F)-alpha-galactosyltransferase activity","type":"exact"},{"name":"sucrose 6F-alpha-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sucrose 6F-alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047235"}


id: MONDO:0020605
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87726,87727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"}]},"cv_name":"mondo","definition":"X-linked recessive form of disease.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked recessive disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080012","MEDGEN:1798083","UMLS:C5566660"],"termid":"MONDO:0020605","terms_by_termid":{"MONDO:0026763":null},"xrefs":{"Monarch":{"xref_id":"0020605"}}}


id: PBO:0066380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: MONDO:0700123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Variants in SMARCC1 cause a novel human syndrome characterized by developmental delay, cerebral ventriculomegaly and aqueductal stenosis, and other associated structural brain and cardiac defects.","direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCC1-associated developmental dysgenesis syndrome","synonyms":[{"name":"SMARCC1-related BAFopathy","type":"exact"}],"termid":"MONDO:0700123","xrefs":{"Monarch":{"xref_id":"0700123"}}}


id: PBO:0029057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole","termid":"PBO:0029057"}


id: GO:0005281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete general amino acid permease activity (obsolete GO:0005281)","synonyms":[{"name":"general amino acid permease activity","type":"exact"},{"name":"general amino acid transporter","type":"broad"}],"termid":"GO:0005281"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:bhm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: GO:0021753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior salivary nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:curators","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary nucleus development","termid":"GO:0021751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior salivary nucleus development","termid":"GO:0021753"}


id: MONDO:0008245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Piebald trait-neurologic defects syndrome is a rare, genetic, pigmentation anomaly of the skin syndrome characterized by ventral as well as dorsal leukoderma of the trunk and a congenital white forelock, in association with cerebellar ataxia, impaired motor coordination, intellectual disability of variable severity and progressive, mild to profound, uni- or bilateral sensorineural hearing loss. There have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"piebald trait-neurologic defects syndrome","secondary_identifiers":["UMLS:C1868311","MEDGEN:358177","MESH:C536955","GARD:5133","OMIM:172850"],"synonyms":[{"name":"White forelock and leukoderma with neurological impairment","type":"related"},{"name":"piebald trait neurologic defects","type":"related"},{"name":"piebald trait with neurologic defects","type":"related"},{"name":"telfer Sugar Jaeger syndrome","type":"related"},{"name":"telfer-Sugar-Jaeger syndrome","type":"exact"}],"termid":"MONDO:0008245","xrefs":{"Monarch":{"xref_id":"0008245"}}}


id: PBO:0074051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 31","termid":"PBO:0074051"}


id: GO:0102193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-ribulosyl-L-lysine = ADP + a [protein]-N6-(3-O-phospho-D-ribulosyl)-L-lysine.","definition_xrefs":["EC:2.7.1.172","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-ribulosamine 3-kinase activity","secondary_identifiers":["RHEA:48432","MetaCyc:RXN-12003"],"termid":"GO:0102193"}


id: PBO:0076265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI5 homologous recombination repair protein","termid":"PBO:0076265"}


id: GO:1990002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxyacetone + NADP+ = H+ + methylglyoxal + NADPH.","definition_xrefs":["PMID:16077126","RHEA:27986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH) (acetol producing) activity","secondary_identifiers":["MetaCyc:RXN0-4281"],"synonyms":[{"name":"methylglyoxal reductase (NADPH-dependent, acetol producing)","type":"exact"}],"termid":"GO:1990002"}


id: PATO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with short, dense, matted hairs.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tomentose","termid":"PATO:0002341"}


id: PBO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.8","termid":"PBO:0000826"}


id: PR:Q7Z9I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YciK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04765","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.09c","secondary_identifiers":["UniProtKB:Q7Z9I2"],"synonyms":[{"name":"Spom972h-yciK","type":"exact"}],"termid":"PR:Q7Z9I2"}


id: FYPO:0005595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a ceramide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular ceramide level","synonyms":[{"name":"normal cellular ceramide accumulation","type":"related"},{"name":"normal cellular ceramide level during mitotic cell cycle","type":"related"},{"name":"normal cellular ceramide level during vegetative growth","type":"exact"}],"termid":"FYPO:0005595"}


id: GO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"positively_regulates","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amide metabolic process","synonyms":[{"name":"positive regulation of amide metabolism","type":"exact"},{"name":"positive regulation of cellular amide metabolic process","type":"exact"}],"termid":"GO:0034250"}


id: PBO:0004434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium ion transporter Mrs2 (predicted)","termid":"PBO:0004434"}


id: PBO:0056750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 1","termid":"PBO:0056750"}


id: PBO:0003755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein Mlo3","termid":"PBO:0003755"}


id: GO:0030746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoflavone = S-adenosyl-L-homocysteine + 4'-O-methylisoflavone.","definition_xrefs":["EC:2.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"isoflavone 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:ISOFLAVONE-4-O-METHYLTRANSFERASE-RXN","RHEA:31739"],"synonyms":[{"name":"4'-hydroxyisoflavone methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:isoflavone 4'-O-methyltransferase activity","type":"related"},{"name":"isoflavone O-methyltransferase activity","type":"related"},{"name":"isoflavone methyltransferase activity","type":"related"}],"termid":"GO:0030746"}


id: FYPO:0005864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 in subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3-K9 methylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal subtelomeric histone H3-K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005864"}


id: PBO:0059656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 22","termid":"PBO:0059656"}


id: PBO:0063300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1A","termid":"PBO:0063300"}


id: GO:0039645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G1/S transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:880","PMID:24501404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G1/S transition checkpoint","synonyms":[{"name":"G1/S host cell cycle checkpoint dysregulation by virus","type":"exact"},{"name":"modulation by virus of host G1/S transition checkpoint","type":"related"},{"name":"perturbation by virus of host G1/S transition checkpoint","type":"narrow"}],"termid":"GO:0039645"}


id: FYPO:0000212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to heat is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to heat","synonyms":[{"name":"abnormal cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0000212"}


id: GO:1902184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["PMID:21496644","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"negatively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of shoot apical meristem development","synonyms":[{"name":"down regulation of SAM development","type":"exact"},{"name":"down regulation of primary shoot meristem development","type":"related"},{"name":"down regulation of promeristem development","type":"broad"},{"name":"down regulation of shoot apical meristem development","type":"exact"},{"name":"down-regulation of SAM development","type":"exact"},{"name":"down-regulation of primary shoot meristem development","type":"related"},{"name":"down-regulation of promeristem development","type":"broad"},{"name":"down-regulation of shoot apical meristem development","type":"exact"},{"name":"downregulation of SAM development","type":"exact"},{"name":"downregulation of primary shoot meristem development","type":"related"},{"name":"downregulation of promeristem development","type":"broad"},{"name":"downregulation of shoot apical meristem development","type":"exact"},{"name":"inhibition of SAM development","type":"exact"},{"name":"inhibition of primary shoot meristem development","type":"related"},{"name":"inhibition of promeristem development","type":"broad"},{"name":"inhibition of shoot apical meristem development","type":"narrow"},{"name":"negative regulation of SAM development","type":"exact"},{"name":"negative regulation of primary shoot meristem development","type":"related"},{"name":"negative regulation of promeristem development","type":"broad"}],"termid":"GO:1902184"}


id: GO:0019061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.","definition_xrefs":["PMID:8162442","GOC:plm","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uncoating of virus","secondary_identifiers":["Reactome:R-HSA-162585","Reactome:R-HSA-168336"],"synonyms":[{"name":"viral uncoating","type":"exact"}],"termid":"GO:0019061"}


id: PBO:0058916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12135","termid":"PBO:0058916"}


id: PBO:0054422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1818","termid":"PBO:0054422"}


id: PBO:0082443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1 phase; CLB5 has a paralog, CLB6, that arose from the whole genome duplication","termid":"PBO:0082443"}


id: GO:0097600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A xylanase activity that acts on one of the ends of a xylan polymer which does not contain side chains.","definition_xrefs":["PMID:16535010","ISBN:81-7736-269-0","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exoxylanase activity","termid":"GO:0097600"}


id: PBO:0072932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 12","termid":"PBO:0072932"}


id: GO:0140722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycophenolic acid (MPA). MPA is the first isolated antibiotic natural product in the world obtained from a culture of Penicillium brevicompactum in 1893.","definition_xrefs":["PMID:31209052","PMID:21398490","PMID:26751579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"mycophenolic acid biosynthetic process","synonyms":[{"name":"MPA anabolism","type":"broad"},{"name":"MPA biosynthesis","type":"broad"},{"name":"MPA formation","type":"broad"},{"name":"MPA synthesis","type":"broad"},{"name":"mycophenolic acid anabolism","type":"exact"},{"name":"mycophenolic acid biosynthesis","type":"exact"},{"name":"mycophenolic acid formation","type":"exact"},{"name":"mycophenolic acid synthesis","type":"exact"}],"termid":"GO:0140722"}


id: MOD:00801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and an eight-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl octairon nonasulfide.","definition_xrefs":["RESID:AA0394","PubMed:8392330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl octairon nonasulfide","synonyms":[{"name":"CysHis-[8Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl octairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-iron cofactor","type":"exact"}],"termid":"MOD:00801"}


id: GO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of water from a contractile vacuole to the outside of a cell by fusion of the contractile vacuole membrane with the plasma membrane.","definition_xrefs":["PMID:10369671","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole discharge","termid":"GO:0070177"}


id: MONDO:0020101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A group of inherited hemolytic anemias caused by erythrocyte membrane defects. This includes hereditary pyropoikilocytosis, hereditary spherocytosis and hereditary elliptocytosis.","definition_xrefs":["NCIT:C101218"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutional hemolytic anemia due to membrane defect (obsolete MONDO:0020101)","secondary_identifiers":["SCTID:111575000","Orphanet:98364"],"synonyms":[{"name":"anemia due to membrane defect","type":"exact"},{"name":"hemolytic anemia due to erythrocyte membrane defect","type":"exact"},{"name":"hemolytic anemia due to membrane defect","type":"exact"},{"name":"rare constitutional hemolytic anemia due to a red cell membrane anomaly","type":"exact"}],"termid":"MONDO:0020101","xrefs":{"Monarch":{"xref_id":"0020101"}}}


id: SO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon encoding pyrrolysine is changed, resulting in a different encoded amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rare_amino_acid_variant","termid":"SO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysine_loss","synonyms":[{"name":"pyrrolysine loss","type":"exact"}],"termid":"SO:0002010"}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butanone oxidase activity (obsolete GO:0018486)","termid":"GO:0018486"}


id: MONDO:0859243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, impaired speech, and behavioral abnormalities","secondary_identifiers":["OMIM:619854","UMLS:C5676975","MEDGEN:1812577"],"termid":"MONDO:0859243","xrefs":{"Monarch":{"xref_id":"0859243"}}}


id: SO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_DNA_chromosome","synonyms":[{"name":"double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000955"}


id: SO:0001215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of an exon that encodes for protein sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_region_of_exon","synonyms":[{"name":"coding region of exon","type":"exact"}],"termid":"SO:0001215"}


id: MONDO:0006900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the connective and adipose tissues surrounding the kidney.","definition_xrefs":["MESH:D010501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"perinephritis","secondary_identifiers":["MedDRA:10072058","SCTID:111404004","EFO:1001099","MEDGEN:10656","UMLS:C0031065","DOID:2982"],"synonyms":[{"name":"inflammation of perirenal fat","type":"exact"},{"name":"perirenal fat inflammation","type":"exact"}],"termid":"MONDO:0006900","xrefs":{"Monarch":{"xref_id":"0006900"}}}


id: GO:0046944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a carbamoyl group to a protein amino acid. A carbamoyl group is the acyl group -CO-NH2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein carbamoylation","synonyms":[{"name":"protein amino acid carbamoylation","type":"exact"}],"termid":"GO:0046944"}


id: GO:0043951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cAMP-mediated signaling","termid":"GO:0043949"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cAMP-mediated signaling","termid":"GO:0019933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cAMP-mediated signaling","synonyms":[{"name":"negative regulation of cAMP-mediated signalling","type":"exact"}],"termid":"GO:0043951"}


id: MONDO:0020140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset ataxia with dementia (obsolete MONDO:0020140)","secondary_identifiers":["Orphanet:98540"],"termid":"MONDO:0020140","xrefs":{"Monarch":{"xref_id":"0020140"}}}


id: PBO:0066671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPPLY3 pseudogene 1","termid":"PBO:0066671"}


id: PBO:0082659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening","termid":"PBO:0082659"}


id: PBO:0077727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 17","termid":"PBO:0077727"}


id: FYPO:0005639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to iron ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to iron starvation","type":"exact"},{"name":"normal RNA level during iron ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005639"}


id: MONDO:1011857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:000826"],"termid":"MONDO:1011857","xrefs":{"Monarch":{"xref_id":"1011857"}}}


id: MONDO:0017463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the femur","secondary_identifiers":["UMLS:C5679939","MEDGEN:1843312","GARD:21204","Orphanet:295020"],"synonyms":[{"name":"congenital pseudarthrosis of the femur","type":"exact"}],"termid":"MONDO:0017463","xrefs":{"Monarch":{"xref_id":"0017463"}}}


id: GO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound metabolic process (obsolete GO:0034641)","synonyms":[{"name":"cellular nitrogen compound metabolism","type":"exact"}],"termid":"GO:0034641"}


id: MONDO:0001452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pseudoretinitis pigmentosa","secondary_identifiers":["UMLS:C2053820","MEDGEN:781175","ICD9:362.65","SCTID:193396007","DOID:12162"],"synonyms":[{"name":"secondary pigmentary degeneration of retina","type":"exact"},{"name":"secondary pigmentary retinal degeneration","type":"exact"}],"termid":"MONDO:0001452","xrefs":{"Monarch":{"xref_id":"0001452"}}}


id: PATO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000142 substance (obsolete PATO:0000142)","termid":"PATO:0000142"}


id: GO:0008775
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77218,78565],"is_not":false,"summary":null,"term":"GO:0008775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA.","definition_xrefs":["EC:2.8.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"acetate CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACECOATRANS-RXN","RHEA:13381","UM-BBD_enzymeID:r0012","Reactome:R-HSA-2066788"],"synonyms":[{"name":"acetate coenzyme A-transferase activity","type":"related"},{"name":"acetyl-CoA:acetoacetate CoA transferase activity","type":"related"},{"name":"acyl-CoA:acetate CoA-transferase activity","type":"related"},{"name":"butyryl CoA:acetate CoA transferase activity","type":"related"},{"name":"butyryl coenzyme A transferase activity","type":"related"},{"name":"succinyl-CoA:acetate CoA transferase activity","type":"related"}],"termid":"GO:0008775","terms_by_termid":{"GO:0008775":null}}


id: PBO:0082491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic component of UDP-GlcNAc transferase; required for the second step of dolichyl-linked oligosaccharide synthesis; anchored to the ER membrane via interaction with Alg14p; similar to bacterial and human glycosyltransferases; protein abundance increases in response to DNA replication stress; both human homologs ALG13 and ALG14 are required to complement yeast alg13 mutant","termid":"PBO:0082491"}


id: PBO:0079994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 32","termid":"PBO:0079994"}


id: GO:0031324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular metabolic process (obsolete GO:0031324)","synonyms":[{"name":"down regulation of cellular metabolic process","type":"exact"},{"name":"down-regulation of cellular metabolic process","type":"exact"},{"name":"downregulation of cellular metabolic process","type":"exact"},{"name":"inhibition of cellular metabolic process","type":"narrow"},{"name":"negative regulation of cellular metabolism","type":"exact"}],"termid":"GO:0031324"}


id: PR:Q92376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkl1 gene.","definition_xrefs":["UniProtKB:Q92376","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.14c","synonyms":[{"name":"Spom972h-pkl1","type":"exact"}],"termid":"PR:Q92376"}


id: GO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).","definition_xrefs":["GOC:tb","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system development","synonyms":[{"name":"skeletal development","type":"exact"}],"termid":"GO:0001501"}


id: PBO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 5","termid":"PBO:0042656"}


id: PBO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 1","termid":"PBO:0043469"}


id: PR:O13905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.14c gene.","definition_xrefs":["UniProtKB:O13905","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain-containing protein C22A12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.14c","synonyms":[{"name":"Spom972h-SPAC22A12.14c","type":"exact"}],"termid":"PR:O13905"}


id: PBO:0086716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene","termid":"PBO:0086716"}


id: PBO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPP38 divergent transcript","termid":"PBO:0071793"}


id: MONDO:0015618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic pancreatic disease (obsolete MONDO:0015618)","secondary_identifiers":["Orphanet:165661"],"termid":"MONDO:0015618","xrefs":{"Monarch":{"xref_id":"0015618"}}}


id: MONDO:0012026
data:
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id: MONDO:0020814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria alba","secondary_identifiers":["MEDGEN:590455","SCTID:201191004","UMLS:C0406493"],"termid":"MONDO:0020814","xrefs":{"Monarch":{"xref_id":"0020814"}}}


id: GO:0035702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of monocytes such that the total number of monocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:BHF","CL:0000576","PMID:18832716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte homeostasis","termid":"GO:0035702"}


id: PBO:0042516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase","termid":"PBO:0042516"}


id: PBO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock_during_vegetative_growth","termid":"PBO:0030713"}


id: GO:0042662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell differentiation","termid":"GO:1905771"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell fate specification","synonyms":[{"name":"down regulation of mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of mesodermal cell fate specification","type":"exact"},{"name":"downregulation of mesodermal cell fate specification","type":"exact"},{"name":"inhibition of mesodermal cell fate specification","type":"narrow"},{"name":"suppression of mesodermal cell fate","type":"exact"}],"termid":"GO:0042662"}


id: GO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligopeptide from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity oligopeptide transmembrane transporter activity","synonyms":[{"name":"high affinity oligopeptide transporter activity","type":"exact"},{"name":"high-affinity oligopeptide transporter activity","type":"related"}],"termid":"GO:0015334"}


id: PBO:0048054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 3","termid":"PBO:0048054"}


id: PBO:0113420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding ribosome assembly factor; constituent of early pre-60S particles; genetically and physically linked to most NOP8 60s ribosome pre-assembly complex members and to ribosomal protein Rpl3p; contains two independent RNA-interacting domains; associates with helix H95 in 3' region of 25S rRNA, in close proximity to binding sites of Npa1p and Rpl3p; interacts with several snoRNAs","termid":"PBO:0113420"}


id: PBO:0038961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin","termid":"PBO:0038961"}


id: PBO:0082850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper metallochaperone that transfers copper to Sco1p and Cox11p; eventual delivery to cytochrome c oxidase; contains twin cysteine-x9-cysteine motifs; interacts with the MICOS complex, and interaction is promoted by copper ions; human homolog COX17 partially complements yeast null mutant","termid":"PBO:0082850"}


id: GO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate catabolic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate breakdown","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate catabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0042217"}


id: MONDO:1010247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly and cerebellar hypoplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly and cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:001867"],"termid":"MONDO:1010247","xrefs":{"Monarch":{"xref_id":"1010247"}}}


id: PBO:0064611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1B","termid":"PBO:0064611"}


id: PBO:0064587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member G","termid":"PBO:0064587"}


id: MONDO:1011619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumour that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"Wilms tumor, non-human animal","termid":"MONDO:1011439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, cattle","secondary_identifiers":["OMIA:001142-9913"],"termid":"MONDO:1011619","xrefs":{"Monarch":{"xref_id":"1011619"}}}


id: GO:0032602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:12183377","ISBN:0198506732","Wikipedia:Chemokine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine production","secondary_identifiers":["GO:0090195","GO:0050755","GO:0042033"],"synonyms":[{"name":"chemokine anabolism","type":"exact"},{"name":"chemokine biosynthesis","type":"exact"},{"name":"chemokine biosynthetic process","type":"narrow"},{"name":"chemokine formation","type":"exact"},{"name":"chemokine metabolic process","type":"narrow"},{"name":"chemokine secretion","type":"narrow"},{"name":"chemokine synthesis","type":"exact"}],"termid":"GO:0032602"}


id: PBO:0017577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Sos7","termid":"PBO:0017577"}


id: PBO:0089765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase/AP-1 adaptor complex binding protein Mil1","termid":"PBO:0089765"}


id: GO:0032049
data:
  {"annotated_genes":["SJAG_04317","SJAG_03700","SJAG_00168","SJAG_03563"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73024,81856,94933,119880],"is_not":false,"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"},{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cardiolipin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5269","Reactome:R-HSA-1483076"],"synonyms":[{"name":"diphosphatidylglycerol biosynthesis","type":"related"},{"name":"diphosphatidylglycerol biosynthetic process","type":"related"}],"termid":"GO:0032049","terms_by_termid":{"GO:0032049":null}}


id: PBO:0064409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 5","termid":"PBO:0064409"}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: MONDO:0007342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common congenital deformation of the foot, occurring in 1 of 1,000 live births. The most common form is talipes equinovarus, where the deformed foot is turned downward and inward sharply.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial clubfoot with or without associated lower limb anomalies","termid":"MONDO:0016046"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clubfoot","secondary_identifiers":["UMLS:C0009081","MEDGEN:3130","MESH:D003025","ICD9:754.51","DOID:11836","OMIM:119800","NCIT:C84641","SCTID:397932003"],"synonyms":[{"name":"CCF","type":"related"},{"name":"club foot","type":"exact"},{"name":"clubbed foot","type":"exact"},{"name":"clubfoot, congenital, with or without deficiency of long bones and/or mirror-IMAGE polydactyly","type":"related"},{"name":"congenital clubfoot","type":"exact"},{"name":"congenital equinovarus","type":"exact"},{"name":"congenital talipes equinovarus","type":"exact"},{"name":"equinovarus deformity of foot","type":"exact"},{"name":"equinovarus deformity of foot (finding)","type":"exact"},{"name":"talipes","type":"exact"},{"name":"talipes equinovarus","type":"exact"}],"termid":"MONDO:0007342","xrefs":{"Monarch":{"xref_id":"0007342"}}}


id: PBO:0041459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 88","termid":"PBO:0041459"}


id: PBO:0082751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat; required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sfb3p; SEC24 has a paralog, SFB2, that arose from the whole genome duplication","termid":"PBO:0082751"}


id: GO:0140663
data:
  {"annotated_genes":["SJAG_02994","SJAG_02895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69216,69539],"is_not":false,"summary":null,"term":"GO:0140663"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein, driven by ATP hydrolysis.","definition_xrefs":["PMID:16843540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02895":null,"SJAG_02994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent FeS chaperone activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"ATP-dependent FeS carrier activity","type":"exact"}],"termid":"GO:0140663","terms_by_termid":{"GO:0140663":null}}


id: PBO:0068871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 111, pseudogene","termid":"PBO:0068871"}


id: GO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance K receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"substance K receptor binding","synonyms":[{"name":"neurokinin-A receptor binding","type":"exact"},{"name":"substance K receptor ligand","type":"narrow"}],"termid":"GO:0031837"}


id: PBO:0074132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 33 member 1","termid":"PBO:0074132"}


id: MONDO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the anatomical structures of the inner ear secondary to an infectious process. Symptoms include severe vertigo, nausea, vomiting, anxiety, and pain. Viral etiology is most common, and recent history of an upper respiratory infection is common. In rare cases an infection of the middle ear can spread to the inner ear, resulting in a bacterial or fungal etiology.","definition_xrefs":["NCIT:C27339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious otitis interna","secondary_identifiers":["UMLS:C1168225","MEDGEN:217000"],"synonyms":[{"name":"infectious labyrinthitis","type":"exact"},{"name":"infectious otitis interna","type":"exact"},{"name":"inner Ear infection","type":"exact"},{"name":"inner ear infection","type":"exact"},{"name":"internal Ear infection","type":"exact"}],"termid":"MONDO:0002812","xrefs":{"Monarch":{"xref_id":"0002812"}}}


id: FYPO:0007983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which some microtubule bundles are not anchored to the nuclear membrane. See PMID:15068790","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"microtubule bundles detached from the nuclear envelope","termid":"FYPO:0007983"}


id: PBO:0029100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sulfate_import","termid":"PBO:0029100"}


id: GO:0002759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an antimicrobial humoral response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antimicrobial humoral response","termid":"GO:0002759"}


id: PBO:0083454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene DAL80","termid":"PBO:0083454"}


id: MOD:00311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine coenzyme A disulfide.","definition_xrefs":["DeltaMass:0","RESID:AA0306","PubMed:1734967","Unimod:281#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine coenzyme A disulfide","synonyms":[{"name":"(2R)-2-amino-3-(2-((3-(((2R)-2,4-dihydroxy-3,3-dimethyl-1-oxobutyl)amino)-1-oxopropyl)amino)ethyl)dithio-propanoic acid 4'-ester with adenosine 5'-(trihydrogen diphosphate) 3'-(dihydrogen phosphate)","type":"exact"},{"name":"CoenzymeA","type":"related"},{"name":"Cysteine modified Coenzyme A","type":"related"},{"name":"L-cysteine coenzyme A disulfide","type":"exact"},{"name":"SCoACys","type":"exact"},{"name":"coenzyme A L-cysteine mixed disulfide","type":"exact"}],"termid":"MOD:00311"}


id: MONDO:1011868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron disease, non-human animal","secondary_identifiers":["OMIA:001165"],"termid":"MONDO:1011868","xrefs":{"Monarch":{"xref_id":"1011868"}}}


id: GO:2000391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil migration","termid":"GO:1902624"},{"relation_name":"is_a","term_name":"regulation of neutrophil extravasation","termid":"GO:2000389"},{"relation_name":"positively_regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil extravasation","termid":"GO:2000391"}


id: MONDO:0032579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warburg-cinotti syndrome","secondary_identifiers":["OMIM:618175","UMLS:C5193019","MEDGEN:1677486"],"synonyms":[{"name":"WARBURG-CINOTTI SYNDROME","type":"related"},{"name":"WRCN","type":"related"}],"termid":"MONDO:0032579","xrefs":{"Monarch":{"xref_id":"0032579"}}}


id: MONDO:0011956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 3","secondary_identifiers":["MEDGEN:334211","OMIM:608049","UMLS:C1842632"],"synonyms":[{"name":"AUTS3","type":"exact"},{"name":"autism susceptibility 3, isolated cases","type":"exact"},{"name":"autism, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011956","xrefs":{"Monarch":{"xref_id":"0011956"}}}


id: FYPO:0002998
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121205,121220],"is_not":false,"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring, and in which medial cortical nodes form irregular clumps instead of coalescing into the medial cortex ring.","definition_xrefs":["PMID:24127216","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished actomyosin contractile ring assembly","termid":"FYPO:0001009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0004803","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly, clumped cytokinesis nodes","type":"exact"},{"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes, during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation, clumped medial cortical nodes","type":"related"},{"name":"abolished contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"abolished cytokinetic ring assembly, clumped medial cortical nodes","type":"related"},{"name":"abolished cytokinetic ring formation, clumped medial cortical nodes","type":"related"},{"name":"abolished mitotic contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"actomyosin contractile ring assembly abolished, clumped medial cortical nodes","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent, with clumped medial cortical nodes","type":"related"}],"termid":"FYPO:0002998","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: PBO:0049344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 2","termid":"PBO:0049344"}


id: GO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the TFIIIC complex, observed in human; composed of five subunits (GTF3C1/hTFIIIC220/TFIIICalpha, GTF3C2/hTFIIIC110/TFIIICbeta, GTF3C3/hTFIIIC102/TFIIICgamma, GTF3C4/hTFIIIC90/TFIIICdelta and GTF3C5/hTFIIIC63/TFIIICepsilon in human) that together recognize the type 2 RNA polymerase III promoter.","definition_xrefs":["PMID:11433012","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"},{"relation_name":"part_of","term_name":"transcription factor TFIIIC complex","termid":"GO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIC2 complex","termid":"GO:0034735"}


id: GO:0140007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates the TORC1 signaling pathway in response to nutrients. The KICSTOR complex is composed of KPTN, ITFG2, C12orf66 and SZT2.","definition_xrefs":["PMID:28199306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"KICSTOR complex","termid":"GO:0140007"}


id: MONDO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the PDE6D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 22","secondary_identifiers":["MEDGEN:816608","OMIM:615665","DOID:0110991","UMLS:C3810278","GARD:15999"],"synonyms":[{"name":"JBTS22","type":"exact"},{"name":"Joubert syndrome 22","type":"exact"},{"name":"Joubert syndrome caused by mutation in PDE6D","type":"exact"},{"name":"Joubert syndrome type 22","type":"exact"},{"name":"PDE6D Joubert syndrome","type":"exact"}],"termid":"MONDO:0014297","xrefs":{"Monarch":{"xref_id":"0014297"}}}


id: PBO:0042493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 1","termid":"PBO:0042493"}


id: PBO:0091273
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low complexity gene-free region","termid":"PBO:0091273"}


id: PBO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 24","termid":"PBO:0070351"}


id: SO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter region of RNA polymerase III type 1 promoters.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate_element","synonyms":[{"name":"IE","type":"exact"},{"name":"intermediate element","type":"related"}],"termid":"SO:0001677"}


id: GO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil activation involved in immune response","synonyms":[{"name":"neutrophil activation during immune response","type":"related"}],"termid":"GO:0002283"}


id: PBO:0047543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 2","termid":"PBO:0047543"}


id: PBO:0073087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 3","termid":"PBO:0073087"}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: FYPO:0007963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells) during nitrogen limitation or poor nitrogen source.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mating efficiency","termid":"FYPO:0001147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal mating efficiency during nitrogen stress","termid":"FYPO:0007963"}


id: PBO:0038502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 11","termid":"PBO:0038502"}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: PBO:0035980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_DNA_replication_initiation_from_late_origin","termid":"PBO:0035980"}


id: PBO:0000178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3a","termid":"PBO:0000178"}


id: FYPO:0007733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes is abnormal.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to chromatin at 3' end of genes","synonyms":[{"name":"abnormal condensin localization to chromatin at 3' end of genes","type":"narrow"},{"name":"abnormal protein localisation to chromatin at 3' end of genes","type":"exact"},{"name":"abnormal protein localization to chromatin at 3' end of genes during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at 3' end of genes during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromatin downstream of genes","type":"exact"}],"termid":"FYPO:0007733"}


id: MONDO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Meningitis that arises from sarcoidosis.","definition_xrefs":["Wikipedia:Neurosarcoidosis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"name":"obsolete sarcoid meningitis (obsolete MONDO:0001424)","secondary_identifiers":["SCTID:192673008","DOID:12055","ICD10CM:D86.81","ICD9:321.4"],"synonyms":[{"name":"meningitis in sarcoidosis","type":"exact"}],"termid":"MONDO:0001424","xrefs":{"Monarch":{"xref_id":"0001424"}}}


id: PBO:0066741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 38","termid":"PBO:0066741"}


id: PBO:0077688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF2 and NCK interacting kinase","termid":"PBO:0077688"}


id: PBO:0068714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 3, pseudogene","termid":"PBO:0068714"}


id: PBO:0074804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13I","termid":"PBO:0074804"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:11299204","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: MONDO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic genome-wide paternal uniparental disomy","secondary_identifiers":["Orphanet:329813","UMLS:C5190828","GARD:21493","MEDGEN:1679626"],"synonyms":[{"name":"Mosaic genome-wide paternal UPD","type":"exact"},{"name":"androgenetic/biparental mosaicism","type":"exact"},{"name":"genome-wide paternal uniparental disomy mosaicism","type":"exact"}],"termid":"MONDO:0018007","xrefs":{"Monarch":{"xref_id":"0018007"}}}


id: FYPO:0001030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dithiothreitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on dithiothreitol","synonyms":[{"name":"normal cell population growth in presence of dithiothreitol","type":"exact"},{"name":"normal cell population growth on 1,4-dithiothreitol","type":"exact"},{"name":"normal cell population growth on DTT","type":"exact"},{"name":"normal cell population growth on dithiothreitol","type":"exact"},{"name":"normal cellular response to dithiothreitol","type":"related"},{"name":"normal vegetative cell population growth on dithiothreitol","type":"exact"}],"termid":"FYPO:0001030"}


id: PBO:0073527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2","termid":"PBO:0073527"}


id: GO:1904041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:24416422","GO_REF:0000059","GOC:hal"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cystathionine beta-synthase activity (obsolete GO:1904041)","synonyms":[{"name":"regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"regulation of beta-thionase activity","type":"exact"},{"name":"regulation of methylcysteine synthase activity","type":"exact"},{"name":"regulation of serine sulfhydrase activity","type":"exact"},{"name":"regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904041"}


id: MONDO:0006232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painless, well circumscribed tumor arising in soft tissue, usually of the upper and lower extremities. Morphologically, it is characterized by a multinodular growth pattern. The cellular infiltrate is composed of mononuclear round or oval cells and multinucleated osteoclast-like giant cells, in a rich vascular stroma. It rarely metastasizes.","definition_xrefs":["NCIT:C49107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant giant cell tumor","termid":"MONDO:0002402"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"giant cell tumor of soft tissue","secondary_identifiers":["EFO:1000281","ICDO:9251/1","MEDGEN:87264","UMLS:C0334553"],"synonyms":[{"name":"GCT-ST","type":"exact"},{"name":"Osteoclastoma of soft tissue","type":"exact"},{"name":"giant cell tumor of soft tissue","type":"exact"}],"termid":"MONDO:0006232","xrefs":{"Monarch":{"xref_id":"0006232"}}}


id: GO:2001030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular glucuronidation (obsolete GO:2001030)","synonyms":[{"name":"negative regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001030"}


id: GO:0030682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the normal execution of a host organism's defense response. The host defense response is mounted by the host in response to the presence of the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated response to host defenses","termid":"GO:0052200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host defenses","secondary_identifiers":["GO:0051807","GO:0051832","GO:0044413","GO:0044415","GO:0051834"],"synonyms":[{"name":"avoidance of defenses of other organism during symbiotic interaction","type":"related"},{"name":"avoidance of defenses of other organism involved in symbiotic interaction","type":"narrow"},{"name":"avoidance of host defences","type":"narrow"},{"name":"avoidance of host defenses","type":"narrow"},{"name":"evasion of host defence response","type":"narrow"},{"name":"evasion of other organism defence response","type":"narrow"},{"name":"evasion or tolerance of defense response of other organism during symbiotic interaction","type":"related"},{"name":"evasion or tolerance of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance of defenses of other organism","type":"related"},{"name":"evasion or tolerance of defenses of other organism during symbiotic interaction","type":"related"},{"name":"evasion or tolerance of defenses of other organism involved in symbiotic interaction","type":"related"},{"name":"evasion or tolerance of host defense response","type":"narrow"},{"name":"evasion or tolerance of host defenses","type":"related"},{"name":"mitigation of host defenses by symbiont","type":"exact"},{"name":"perturbation of host defenses by symbiont","type":"exact"}],"termid":"GO:0030682"}


id: GO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete barbed-end actin capping/severing activity (obsolete GO:0003784)","synonyms":[{"name":"barbed-end actin capping/severing activity","type":"exact"}],"termid":"GO:0003784"}


id: GO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination within rDNA repeats (obsolete GO:0045866)","synonyms":[{"name":"positive regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045866"}


id: FYPO:0003482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased punctate cytoplasmic protein localization","synonyms":[{"name":"increased protein localization to cytoplasmic puncta","type":"exact"},{"name":"increased punctate cytoplasmic protein localisation","type":"exact"},{"name":"increased punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003482"}


id: PBO:0040224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1","termid":"PBO:0040224"}


id: MONDO:0859571
data:
  {"annotated_genes":["SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87558],"is_not":false,"summary":null,"term":"MONDO:0859571"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diaphragmatic hernia","termid":"MONDO:0005711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic hernia 4, with cardiovascular defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620025","MEDGEN:1823983","UMLS:C5774210"],"termid":"MONDO:0859571","terms_by_termid":{"MONDO:0859571":null},"xrefs":{"Monarch":{"xref_id":"0859571"}}}


id: MONDO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Phleum pratense.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete Timothy grass allergy (obsolete MONDO:0000773)","secondary_identifiers":["DOID:0060498"],"synonyms":[{"name":"Phleum pratense allergic disease","type":"exact"},{"name":"Phleum pratense caused allergic disease","type":"exact"},{"name":"allergy of Phleum pratense","type":"exact"}],"termid":"MONDO:0000773","xrefs":{"Monarch":{"xref_id":"0000773"}}}


id: FYPO:0007802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form linear element that are shorter than normal.","definition_xrefs":["PMID:33825974","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element morphology","termid":"FYPO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"short linear element","synonyms":[{"name":"decreased linear element length","type":"exact"},{"name":"reduced linear element length","type":"exact"}],"termid":"FYPO:0007802"}


id: PR:P78847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup205 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup186 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC290.03c","secondary_identifiers":["UniProtKB:P78847"],"synonyms":[{"name":"Spom972h-NUP205","type":"exact"},{"name":"nuclear pore protein nup186 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78847"}


id: PBO:0030756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030756"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: GO:0086066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication","type":"exact"}],"termid":"GO:0086066"}


id: PBO:0065922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 2A","termid":"PBO:0065922"}


id: PBO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein","termid":"PBO:0000146"}


id: GO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron maturation","synonyms":[{"name":"down regulation of neuron maturation","type":"exact"},{"name":"down-regulation of neuron maturation","type":"exact"},{"name":"downregulation of neuron maturation","type":"exact"},{"name":"inhibition of neuron maturation","type":"narrow"}],"termid":"GO:0014043"}


id: GO:0141213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vacuole organization in its host organism to form a protected environment in which it can replicate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23186105","PMID:21822290","PMID:30893609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host vacuole organization","termid":"GO:0044075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated generation of symbiont replication vacuole","termid":"GO:0141213"}


id: PATO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000776 memory value (obsolete PATO:0000776)","termid":"PATO:0000776"}


id: PBO:0082839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of the mitochondrial import motor; associated with the presequence translocase; function overlaps with that of Pam18p; stimulates the ATPase activity of Ssc1p to drive mitochondrial import; contains a J domain","termid":"PBO:0082839"}


id: _global:temporally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally_related_to","secondary_identifiers":["RO:0002222"],"termid":"_global:temporally_related_to"}


id: GO:0098687
data:
  {"annotated_genes":["SJAG_01075","SJAG_01745","SJAG_03460","SJAG_04841","SJAG_03832","SJAG_02576","SJAG_02336","SJAG_01224","SJAG_02866","SJAG_04039","SJAG_02465","SJAG_03685","SJAG_03789","SJAG_04581","SJAG_04140","SJAG_03683","SJAG_02401","SJAG_01775","SJAG_02119","SJAG_01864","SJAG_03942","SJAG_05266","SJAG_06642","SJAG_02773","SJAG_00697","SJAG_03287","SJAG_02908","SJAG_00594","SJAG_00884","SJAG_04190","SJAG_01371","SJAG_03997","SJAG_02116","SJAG_06560","SJAG_03356","SJAG_02651","SJAG_00483","SJAG_02927","SJAG_00646","SJAG_01698","SJAG_00302","SJAG_03217","SJAG_00082","SJAG_00935","SJAG_01067","SJAG_04245","SJAG_03437","SJAG_05220","SJAG_01278","SJAG_00429","SJAG_04186","SJAG_03916","SJAG_04126","SJAG_00207","SJAG_04586","SJAG_00350","SJAG_02513","SJAG_01211","SJAG_00307","SJAG_03867","SJAG_02846","SJAG_00678","SJAG_04038","SJAG_04142","SJAG_03092","SJAG_06597","SJAG_05979","SJAG_02194","SJAG_03722","SJAG_00756","SJAG_03042","SJAG_00170","SJAG_02299","SJAG_01330","SJAG_01777","SJAG_03855","SJAG_00794","SJAG_04574","SJAG_03567","SJAG_02212","SJAG_04205","SJAG_03989","SJAG_03635","SJAG_03048","SJAG_01332","SJAG_00684","SJAG_05372","SJAG_01377","SJAG_01613","SJAG_02814","SJAG_01837","SJAG_02624","SJAG_00418","SJAG_00939","SJAG_00676","SJAG_05373","SJAG_01831","SJAG_02818","SJAG_02362","SJAG_03026","SJAG_04150","SJAG_02451","SJAG_00378","SJAG_00666","SJAG_01675","SJAG_03350","SJAG_00414","SJAG_01378","SJAG_05173","SJAG_03780","SJAG_02348","SJAG_01546","SJAG_02761","SJAG_04030","SJAG_00640","SJAG_03449","SJAG_02990","SJAG_00768","SJAG_04400","SJAG_05239","SJAG_03926","SJAG_04623","SJAG_05019","SJAG_01082","SJAG_01228","SJAG_04696","SJAG_04141","SJAG_03418","SJAG_03540","SJAG_05319","SJAG_04255","SJAG_05321","SJAG_04372","SJAG_02778","SJAG_00600","SJAG_03126","SJAG_00364","SJAG_03844","SJAG_01601","SJAG_01836","SJAG_04177","SJAG_01046","SJAG_05273","SJAG_01540","SJAG_04097","SJAG_04700","SJAG_02768","SJAG_00806","SJAG_04076","SJAG_03491","SJAG_04201","SJAG_03664","SJAG_05353","SJAG_01928","SJAG_02409","SJAG_04183","SJAG_04884","SJAG_01050","SJAG_02346","SJAG_03543","SJAG_03680","SJAG_01717","SJAG_03945","SJAG_04040","SJAG_04745","SJAG_04412","SJAG_00934","SJAG_04508","SJAG_04699","SJAG_01297","SJAG_03982","SJAG_03298","SJAG_03353","SJAG_03720","SJAG_03161","SJAG_05329","SJAG_01410","SJAG_01605","SJAG_03681","SJAG_05105","SJAG_03183","SJAG_00229","SJAG_05260","SJAG_02731","SJAG_04670","SJAG_02725","SJAG_03327","SJAG_01579","SJAG_02872","SJAG_02863","SJAG_03619","SJAG_02807","SJAG_04253","SJAG_02563","SJAG_03220","SJAG_02771","SJAG_04863","SJAG_00918","SJAG_02664","SJAG_02621","SJAG_04259","SJAG_03193","SJAG_01873","SJAG_03128","SJAG_00293","SJAG_03689","SJAG_01805","SJAG_00335"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93959,91937,113951,108268,111649,119177,93218,118541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061638"},{"annotations":[104005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"},{"annotations":[92658,114181,119468,110124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061838"},{"annotations":[72297,108157,112299,91561,113679,90946,115387,116506,89861,118488],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0034506"},{"annotations":[100975,111949,113212,60308,103206,71956,108234,106450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000775"},{"annotations":[91923,118880,110131,120600,108269,62298,91232,61469,93220,90947,113213,89728,116295,116434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099115"},{"annotations":[121382,121574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000781"},{"annotations":[110132,114937,114514,108113,110094,101111,115293,113722,67316,108582,101384,89257,114832,118267,104290,106129,106094,68711,118683,109315,114935,101852,103074,60419,78980,93313,114883,71339,59477,70963,90408,113184,120122,111089,120663,60168,62044,102795,72804,114934,58415,59691,59012,60764,58861,114936,57719,99339,93960,67436,112203,71054,113530,92508,94414,114099,90993,64711,118336,100201,67651,114933,101483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140445"},{"annotations":[89672,104009,93153,92798,101037,109707,109790,118881,109754,91939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000779"},{"annotations":[64238,112362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990879"},{"annotations":[63213,102454,69839,78322,64480,64554,76731,118940,60973,81455],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[116508,112301,118684,115230,117917,114184,101191],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[115391,91863,72307,106826,75251,101135,77153,120900,74702,78131,81670,81433,121361,96671,117099,107436,98684,102069,81237,92659,91234,99191,111200,105833,110225,104293,121556,113893,66075,106497,114049],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000776"},{"annotations":[103277,115792],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[71628,60716,81690,76094],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[96601,91918,96195,107509,115562,115121,108333,62494,99827,116151,91566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[70692,113682],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[77656,78925,77494,76663],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[102311,116513,120706],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"},{"annotations":[64599,112476,119781,117443,120740,91238,104725,93962,95971,103780,120604,113209,61473,101536,118002,118886,115061,115681,120862,110135,114616,93157,114615,120126,94268,93228,120012,91927,95723,89509,101489,116300,109301,116439,106036,115235,62302,115297,95987,100887,101042,119723,115999,108271,106133,98072,119150,109794,114211,92803,61244,93296,114106,89732,98650,116584,108514],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005721"},{"annotations":[91642,96999,117961,93731,101650,81649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070187"},{"annotations":[119782,98651,101043,115300,114213,119151,119724,95724,114619,93159,106037,95972,112477,101490,114109,64595,114618,116001,61240,93965,117962,120128,92804,98073,120864,106136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140720"},{"annotations":[109909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000782"}]},"cv_name":"cellular_component","definition":"Any subdivision of a chromosome along its length.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical 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id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: MONDO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1p35.2 microdeletion syndrome","secondary_identifiers":["Orphanet:456298","UMLS:C5679992","GARD:21898","MEDGEN:1807819"],"synonyms":[{"name":"Del(1)(p35.2)","type":"exact"},{"name":"deletion 1p35.2","type":"exact"},{"name":"monosomy 1p35.2","type":"exact"}],"termid":"MONDO:0018697","xrefs":{"Monarch":{"xref_id":"0018697"}}}


id: MONDO:0011028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2F (LGMD2F) is a subtype of autosomal recessive limb-girdle muscular dystrophy characterized by a variable age of onset of progressive weakness and wasting of the proximal skeletal muscles of the shoulder and pelvic girdles, frequently associated with progressive respiratory muscle impairment and cardiomyopathy. Calf hypertrophy, muscle cramps and elevated serum creatine kinase levels are also observed. Neuropsychomotor development is usually normal.","definition_xrefs":["Orphanet:219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of delta-sarcoglycan","termid":"MONDO:0016144"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2F","secondary_identifiers":["MEDGEN:331308","SCTID:718177001","UMLS:C1832525","DOID:0110280","OMIM:601287","MESH:C535896","GARD:8573"],"synonyms":[{"name":"LGMD2F","type":"exact"},{"name":"SGCD autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in SGCD","type":"exact"},{"name":"delta-sarcoglycanopathy","type":"broad"},{"name":"limb-girdle muscular dystrophy due to delta-sarcoglycan deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2F","type":"related"},{"name":"muscular dystrophy limb-girdle with delta-sarcoglyan deficiency","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 6","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2F","type":"related"}],"termid":"MONDO:0011028","xrefs":{"Monarch":{"xref_id":"0011028"}}}


id: SO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_conserved_region","synonyms":[{"name":"conserved non-coding element","type":"exact"},{"name":"conserved non-coding sequence","type":"exact"},{"name":"nc conserved region","type":"exact"},{"name":"noncoding conserved region","type":"exact"}],"termid":"SO:0000334"}


id: PR:Q9Y7K7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi apparatus membrane protein TVP23 homolog C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03490","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.05c","secondary_identifiers":["UniProtKB:Q9Y7K7"],"synonyms":[{"name":"Spom972h-TVP23C","type":"exact"}],"termid":"PR:Q9Y7K7"}


id: GO:1904737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["PMID:25416781","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","synonyms":[{"name":"activation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"}],"termid":"GO:1904737"}


id: GO:2000652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of secondary cell wall biogenesis","synonyms":[{"name":"regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"regulation of secondary cell wall anabolism","type":"related"},{"name":"regulation of secondary cell wall biosynthetic process","type":"related"},{"name":"regulation of secondary cell wall formation","type":"related"},{"name":"regulation of secondary cell wall synthesis","type":"related"}],"termid":"GO:2000652"}


id: FYPO:0006321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is decreased.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"decreased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0006321"}


id: PBO:0091864
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RPN12","termid":"PBO:0091864"}


id: MONDO:0043364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare abnormality of eosinophil granulocytes characterized by decreased or absent peroxidase activity and decreased volume of the granule matrix.","definition_xrefs":["OMIM:261500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"eosinophil peroxidase deficiency","secondary_identifiers":["GARD:12361","MEDGEN:342386","UMLS:C1850000","SCTID:711160007","MESH:C564893"],"synonyms":[{"name":"EPXD","type":"related"},{"name":"Presentey anomaly","type":"related"},{"name":"eosinophil peroxidase deficiency","type":"exact"},{"name":"eosinophil peroxidase deficiency, Partial","type":"related"},{"name":"eosinophil peroxidase deficiency, partial","type":"related"},{"name":"peroxidase and phospholipid deficiency in eosinophils","type":"related"},{"name":"presentey anomaly","type":"related"}],"termid":"MONDO:0043364","xrefs":{"Monarch":{"xref_id":"0043364"}}}


id: PBO:0030599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_vacuole","termid":"PBO:0030599"}


id: MOD:01504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01504"}


id: MONDO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary and is characterized by the presence of mullerian-type epithelial tissue in a mesenchymal sarcomatous stroma. The presence of a high grade sarcomatous component is associated with recurrences and metastases.","definition_xrefs":["NCIT:C7317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenosarcoma","secondary_identifiers":["DOID:4115","MEDGEN:277458","UMLS:C1335169"],"synonyms":[{"name":"adenosarcoma of ovary","type":"exact"},{"name":"ovarian Mullerian adenosarcoma","type":"exact"},{"name":"ovarian Müllerian adenosarcoma","type":"exact"},{"name":"ovarian adenosarcoma","type":"exact"},{"name":"ovarian mesodermal adenosarcoma","type":"exact"},{"name":"ovarian mullerian adenosarcoma","type":"exact"},{"name":"ovary adenosarcoma","type":"exact"}],"termid":"MONDO:0002880","xrefs":{"Monarch":{"xref_id":"0002880"}}}


id: PBO:0074332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 divergent transcript","termid":"PBO:0074332"}


id: PBO:0113020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome; localizes to peroxisomes in oleate-growing cells","termid":"PBO:0113020"}


id: PBO:0042607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 7","termid":"PBO:0042607"}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_00342","SJAG_03967","SJAG_03048","SJAG_00150","SJAG_03421","SJAG_03061","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77995,81233,81346,81883,97718,104343,107663],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["PMID:9841670","GOC:rn","GOC:pr","PMID:7877684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740","GO:0004672","GO:0140096"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3788705","EC:2.7.11.22","Reactome:R-HSA-187948","Reactome:R-HSA-69754","Reactome:R-HSA-69756","Reactome:R-HSA-174251","Reactome:R-HSA-1912391","Reactome:R-HSA-9624800","Reactome:R-HSA-2220971","Reactome:R-HSA-2984220","Reactome:R-HSA-6793661","Reactome:R-HSA-187959","Reactome:R-HSA-174079","Reactome:R-HSA-2468293","Reactome:R-HSA-2514854","Reactome:R-HSA-1226095","Reactome:R-HSA-9009282","Reactome:R-HSA-6797606","Reactome:R-HSA-380278","Reactome:R-HSA-5195402","Reactome:R-HSA-5692755","Reactome:R-HSA-9008412","Reactome:R-HSA-68944","Reactome:R-HSA-2990882","Reactome:R-HSA-69227","Reactome:R-HSA-9686521","GO:0016537","Reactome:R-HSA-5244669","Reactome:R-HSA-180047","Reactome:R-HSA-174122","Reactome:R-HSA-187916","Reactome:R-HSA-2430533","Reactome:R-HSA-187520","Reactome:R-HSA-2468287","Reactome:R-HSA-4086410","Reactome:R-HSA-1226094","Reactome:R-HSA-174132","Reactome:R-HSA-2245218","Reactome:R-HSA-4088024","Reactome:R-HSA-6805109","Reactome:R-HSA-2172183","Reactome:R-HSA-2294600","Reactome:R-HSA-188390","Reactome:R-HSA-69005"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: GO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"o-xylene metabolic process","termid":"GO:0018950"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene catabolic process","synonyms":[{"name":"o-xylene breakdown","type":"exact"},{"name":"o-xylene catabolism","type":"exact"},{"name":"o-xylene degradation","type":"exact"},{"name":"ortho-xylene catabolic process","type":"exact"},{"name":"ortho-xylene catabolism","type":"exact"}],"termid":"GO:0042186"}


id: PBO:0027001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_prospore_membrane","termid":"PBO:0027001"}


id: PR:O74497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain-containing protein C285.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.10c","synonyms":[{"name":"Spom972h-SPCC285.10c","type":"exact"}],"termid":"PR:O74497"}


id: GO:0044187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small lytic vacuole that has cell cycle-independent morphology and is found in most host animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and host cell lysosomes have a great variety of morphologies and functions.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell lysosome","termid":"GO:0044187"}


id: PR:Q9Y7M7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 10, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03018","PANTHER:PTHR24221:SF76","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent permease MDL1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.09c","secondary_identifiers":["UniProtKB:Q9Y7M7"],"synonyms":[{"name":"ABC transporter mdl1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ABCB10","type":"exact"}],"termid":"PR:Q9Y7M7"}


id: PBO:0029839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0029839"}


id: MONDO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease characterized by inflammation located in stomach and located in duodenum, has symptom nausea, has symptom vomiting, has symptom weight loss and has symptom loss of appetite.","definition_xrefs":["DOID:0060191","PMID:12769447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenitis","termid":"MONDO:0004627"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"gastroduodenal Crohn disease","secondary_identifiers":["MEDGEN:1613956","UMLS:C4544979"],"synonyms":[{"name":"gastroduodenal Crohn's disease","type":"exact"},{"name":"upper GI Crohn's disease","type":"exact"}],"termid":"MONDO:0000710","xrefs":{"Monarch":{"xref_id":"0000710"}}}


id: MONDO:0014581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal dominant inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous mutation in the CHRNB1 gene on chromosome 17p13.","definition_xrefs":["DOID:0110681","PMID:8872460","PMID:25792100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 2A","secondary_identifiers":["GARD:9895","MEDGEN:908185","OMIM:616313","UMLS:C4225374"],"synonyms":[{"name":"CMS IIa","type":"related"},{"name":"CMS2A","type":"exact"},{"name":"SCCMS","type":"related"},{"name":"congenital myasthenic syndrome 2A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 2A","type":"exact"},{"name":"myasthenic syndrome, congenital, 2A, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, postsynaptic slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, type IIa","type":"related"},{"name":"slow channel congenital myasthenic syndrome","type":"related"}],"termid":"MONDO:0014581","xrefs":{"Monarch":{"xref_id":"0014581"}}}


id: PBO:0034684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Ssb1_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034684"}


id: PBO:0004237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphogenesis protein Mor2","termid":"PBO:0004237"}


id: PBO:0044267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 6","termid":"PBO:0044267"}


id: PBO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroguidin","termid":"PBO:0060977"}


id: PBO:0080964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7A","termid":"PBO:0080964"}


id: PBO:0117099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS1 antisense RNA 1","termid":"PBO:0117099"}


id: PBO:0084569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein involved in zinc ion homeostasis; member of the four-protein IZH family; expression induced by fatty acids and altered zinc levels; deletion reduces sensitivity to excess zinc; possible role in sterol metabolism; protein increases in abundance and relocalizes from nucleus to ER upon DNA replication stress; IZH4 has a paralog, IZH1, that arose from the whole genome duplication","termid":"PBO:0084569"}


id: PBO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 1","termid":"PBO:0060880"}


id: PBO:0085101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein of unknown function; relocalizes to the cytosol in response to hypoxia; contains WD-40 domains; not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0085101"}


id: PBO:0027312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027312"}


id: PBO:0069493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 760, pseudogene","termid":"PBO:0069493"}


id: GO:2001146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001146)","termid":"GO:2001146"}


id: GO:0033186
data:
  {"annotated_genes":["SJAG_02198","SJAG_02439","SJAG_04272"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74778,96730,109698],"is_not":false,"summary":null,"term":"GO:0033186"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). In many species the CAF-1 subunits are designated p150, p60, and p48.","definition_xrefs":["PMID:17065558","PMID:17083276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02439":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CAF-1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin assembly factor 1 complex","type":"exact"}],"termid":"GO:0033186","terms_by_termid":{"GO:0033186":null}}


id: RO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","termid":"RO:0000091"}


id: PBO:0014295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 involved in ubiquitin-dependent protein catabolism (predicted)","termid":"PBO:0014295"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: GO:0019538
data:
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assembly","type":"exact"},{"name":"down regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"down regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"down regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"down-regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"down-regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"down-regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"down-regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"down-regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"down-regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"down-regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"down-regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"down-regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"down-regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"downregulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"downregulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"downregulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"downregulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"downregulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"downregulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"downregulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"downregulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"downregulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"downregulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"inhibition of Frizzled-LRP5/6 complex assembly","type":"narrow"},{"name":"inhibition of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"inhibition of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"inhibition of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"inhibition of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"inhibition of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"inhibition of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"narrow"},{"name":"inhibition of Wnt-FZD-LRP5/6 trimeric complex formation","type":"narrow"},{"name":"inhibition of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"inhibition of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"negative regulation of Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"negative regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"negative regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"negative regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"negative regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"negative regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"negative regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"negative regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"negative regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"negative regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904723"}


id: MONDO:0022757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 20 trisomy, (also called trisomy 20) is a condition in which a fetus or individual has an extra full or partial copy of chromosome 20 in some or allof of his/her cells. An extra full copy of chromosome 20 in all of a person's cells is rare, and almost all fetuses with this do not survive past the first trimester ofpregnancy. The presence of an extra copyof only part of chromosome 20 is called partial trisomy 20; and an extra copy of chromosome 20 in only some of a person's cells is called mosaic trisomy 20. Mosaic trisomy 20 is the most common type of chromosome 20 trisomy and is one of the more common chromosomal abnormalities found during prenatal diagnostic testing. Studies have shown that the child is normal in the vast majority of prenatally diagnosed individuals. However, features that have been reported include spinal abnormalities (including spinal stenosis, vertebral fusion, and kyphosis), hypotonia (decreased muscle tone), life long constipation, sloped shoulders, and significant learning disabilities despite normal intelligence. Trisomy 20 usually results from an error that occurs when an egg or sperm cell develops (before fertilization); mosaic trisomy 20 usually results from errors in cell division soon after fertilization.","definition_xrefs":["GARD:0005332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 trisomy","secondary_identifiers":["MESH:C535372","NCIT:C36397","MEDGEN:120542","UMLS:C0265479","GARD:5332"],"synonyms":[{"name":"mosaic trisomy 20","type":"related"},{"name":"trisomy 20","type":"related"},{"name":"trisomy 20 mosaicism","type":"related"},{"name":"trisomy chromosome 20","type":"related"}],"termid":"MONDO:0022757","xrefs":{"Monarch":{"xref_id":"0022757"}}}


id: GO:0052174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host macromolecule (obsolete GO:0052174)","termid":"GO:0052174"}


id: PBO:0035792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_deacetylation_during_vegetative_growth","termid":"PBO:0035792"}


id: GO:0035183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous actin-rich layer of the insect ovarian ring canal that forms subcortically to the outer rim. The electron dense inner rim accumulates after the final mitotic division of each germline syncytia, and contains actin, a phosphotyrosine protein, and a number of cytoskeletal proteins.","definition_xrefs":["PMID:9093858","PMID:7925006","PMID:10556087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"female germline ring canal","termid":"GO:0035324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"female germline ring canal inner rim","synonyms":[{"name":"germline ring canal inner rim","type":"broad"},{"name":"nurse cell ring canal inner rim","type":"narrow"},{"name":"ovarian ring canal inner rim","type":"narrow"}],"termid":"GO:0035183"}


id: PBO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 2","termid":"PBO:0050802"}


id: PBO:0047409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 47","termid":"PBO:0047409"}


id: PBO:0067079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 111, pseudogene","termid":"PBO:0067079"}


id: GO:0031718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 cannabinoid receptor binding","synonyms":[{"name":"type 1 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031718"}


id: PBO:0088629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Irs4","termid":"PBO:0088629"}


id: GO:1904901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin II filament organization.","definition_xrefs":["GO_REF:0000058","PMID:22761445","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"positive regulation of myosin II filament organization","synonyms":[{"name":"activation of myosin II filament assembly or disassembly","type":"related"},{"name":"activation of myosin II filament organisation","type":"narrow"},{"name":"activation of myosin II filament organization","type":"narrow"},{"name":"activation of myosin II polymerization or depolymerization","type":"related"},{"name":"positive regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"positive regulation of myosin II filament organisation","type":"exact"},{"name":"positive regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up regulation of myosin II filament organisation","type":"exact"},{"name":"up regulation of myosin II filament organization","type":"exact"},{"name":"up regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up-regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up-regulation of myosin II filament organisation","type":"exact"},{"name":"up-regulation of myosin II filament organization","type":"exact"},{"name":"up-regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"upregulation of myosin II filament assembly or disassembly","type":"related"},{"name":"upregulation of myosin II filament organisation","type":"exact"},{"name":"upregulation of myosin II filament organization","type":"exact"},{"name":"upregulation of myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:1904901"}


id: PBO:0013018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl3","termid":"PBO:0013018"}


id: GO:1990559
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72250],"is_not":false,"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11158296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transmembrane transport","termid":"GO:0035349"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990559","terms_by_termid":{"GO:1990559":null}}


id: MONDO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"optic atrophy-ataxia-peripheral neuropathy-global developmental delay syndrome","secondary_identifiers":["UMLS:C5681321","GARD:22231","MEDGEN:1807322","Orphanet:543470"],"termid":"MONDO:0034092","xrefs":{"Monarch":{"xref_id":"0034092"}}}


id: PBO:0088792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication termination factor Rtf2","termid":"PBO:0088792"}


id: GO:0016737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.19.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}


id: GO:1904220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GO_REF:0000059","PMID:16120614","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"regulation of SPT","type":"related"},{"name":"regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"regulation of serine palmitoyltransferase","type":"broad"}],"termid":"GO:1904220"}


id: PR:O13762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C17A2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.12","synonyms":[{"name":"Spom972h-rrp1","type":"exact"}],"termid":"PR:O13762"}


id: PR:Q8NKC1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.04c gene.","definition_xrefs":["UniProtKB:Q8NKC1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.04c","synonyms":[{"name":"Spom972h-SPBPB21E7.04c","type":"exact"}],"termid":"PR:Q8NKC1"}


id: PBO:0044277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 1","termid":"PBO:0044277"}


id: PBO:0051712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSC spindle orientation adaptor protein","termid":"PBO:0051712"}


id: GO:0008959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + phosphate = CoA + acetyl phosphate.","definition_xrefs":["EC:2.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphate acetyltransferase activity","secondary_identifiers":["RHEA:19521","MetaCyc:PHOSACETYLTRANS-RXN"],"synonyms":[{"name":"PTA","type":"related"},{"name":"acetyl-CoA:phosphate acetyltransferase activity","type":"related"},{"name":"phosphoacylase activity","type":"related"},{"name":"phosphotransacetylase activity","type":"related"}],"termid":"GO:0008959"}


id: PBO:0089103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxin family transmembrane transporter","termid":"PBO:0089103"}


id: GO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacts selectively with the immunosuppressant FK506, and possesses peptidyl-prolyl isomerase activity (catalysis of the reaction: peptidoproline (omega=180) = peptidylproline (omega=0)).","definition_xrefs":["ISBN:0198506732","EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete FK506-sensitive peptidyl-prolyl cis-trans isomerase (obsolete GO:0030051)","synonyms":[{"name":"FK506 binding protein","type":"related"},{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"exact"},{"name":"FKBP","type":"related"}],"termid":"GO:0030051"}


id: GO:0051519
data:
  {"annotated_genes":["SJAG_03581","SJAG_02392","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91744,96484,97759],"is_not":false,"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that initiates the inactive process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of bipolar cell growth","termid":"GO:0051518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051519","terms_by_termid":{"GO:0051519":null}}


id: GO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mannose binding lectin (obsolete GO:0005532)","synonyms":[{"name":"mannose binding lectin","type":"exact"},{"name":"mannose receptor","type":"related"}],"termid":"GO:0005532"}


id: PBO:0041281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 7","termid":"PBO:0041281"}


id: FYPO:0007846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during anaphase of meiosis I.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000120","FYPO:0000002"],"is_obsolete":false,"name":"short meiotic spindle during anaphase I","synonyms":[{"name":"short meiosis I spindle during anaphase","type":"exact"},{"name":"short spindle during anaphase of meiosis I","type":"exact"},{"name":"short spindle during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0007846"}


id: PATO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000755 vocalization value (obsolete PATO:0000755)","termid":"PATO:0000755"}


id: PBO:0043066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 2","termid":"PBO:0043066"}


id: MONDO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lesion that involves the salivary glands, usually the parotid gland. It affects females more often than males and it may be a manifestation of autoimmune diseases such as Sjogren syndrome. There is an increased incidence of benign lymphoepithelial lesions in HIV-positive patients. It is characterized by the presence of a marked lymphocytic infiltrate and epi-myoepithelial islands in the affected salivary gland. Patients usually present with firm and painless swelling of the affected salivary gland. There is an increased risk for development of lymphoma.","definition_xrefs":["NCIT:C3949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of exocrine system","termid":"MONDO:0000586"},{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"benign lymphoepithelial lesion of salivary gland","secondary_identifiers":["DOID:12899","MEDGEN:120595","SCTID:45517002","UMLS:C0266995","icd11.foundation:1330363110","ICD9:527.8"],"synonyms":[{"name":"Godwin tumor","type":"exact"},{"name":"Godwin tumour","type":"exact"},{"name":"benign lymphoepithelial lesion of salivary gland","type":"exact"},{"name":"benign lymphoepithelial lesion of the salivary gland","type":"related"},{"name":"benign salivary gland lymphoepithelial lesion","type":"related"}],"termid":"MONDO:0001598","xrefs":{"Monarch":{"xref_id":"0001598"}}}


id: GO:0033127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone phosphorylation (obsolete GO:0033127)","termid":"GO:0033127"}


id: PBO:0066154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP6 pseudogene 1","termid":"PBO:0066154"}


id: FYPO:0005643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased, and an increased amount of the protein is instead detected in the nucleus and at the spindle pole body.","definition_xrefs":["PMID:24478458","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","synonyms":[{"name":"decreased protein localisation to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell end, with protein mislocalized to nucleus and spindle pole body","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and SPB","type":"exact"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip, with protein mislocalized to nucleus and spindle pole body","type":"exact"}],"termid":"FYPO:0005643"}


id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: PBO:0082627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of conserved R2TP complex (Rvb1-Rvb2-Tah1-Pih1); R2TP complex interacts with Hsp90 (Hsp82p and Hsc82p) to mediate assembly of large protein complexes such as box C/D snoRNPs and RNA polymerase II; contains a single TPR domain with at least two TPR motifs; plays a role in determining prion variants","termid":"PBO:0082627"}


id: GO:0120100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane complex embedded in the cytoplasmic membrane which is the motor force, or torque, generator of the bacterial-type flagellum. The motor consists of a membrane-anchored rotor complex surrounded by one or more stator complexes in the cytoplasmic membrane. The stator consists of a hetero-hexameric complex of 2 membrane proteins, A and B, with stoichiometry A4B2. Examples are the H+ driven MotA-MotB stator complex of Escherichia coli and Salmonella enterica, and the Na+ driven PomA-PomB stator complex of Vibrio and Shewanella species. The rotor complex consists of a membrane-anchored ring and the motor switch complex, which controls the direction of flagellar rotation.","definition_xrefs":["PMID:25251856","GOC:cilia","PMID:24697492","PMID:12624192","PMID:10572114","DOI:10.1002/9780470015902.a0000744.pub4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum motor","termid":"GO:0120100"}


id: PBO:0074100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 3","termid":"PBO:0074100"}


id: GO:0015275
data:
  {"annotated_genes":["SJAG_04668","SJAG_02532","SJAG_02877","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94241,94299,101560,115941],"is_not":false,"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"stretch-activated, monoatomic cation-selective, calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stretch-activated, cation-selective, calcium channel activity","type":"broad"}],"termid":"GO:0015275","terms_by_termid":{"GO:0015275":null}}


id: GO:0050905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process pertaining to the functions of the nervous and muscular systems of an organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process","synonyms":[{"name":"neuromotor process","type":"exact"},{"name":"neuromuscular physiological process","type":"exact"}],"termid":"GO:0050905"}


id: PBO:0048679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliomedin","termid":"PBO:0048679"}


id: PR:Q9P6Q3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial chaperone BCS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01124","PANTHER:PTHR23070:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial chaperone bcs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.07","secondary_identifiers":["UniProtKB:Q9P6Q3"],"synonyms":[{"name":"BCS1-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-BCS1L","type":"exact"}],"termid":"PR:Q9P6Q3"}


id: PBO:0113122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential ATP-binding protein required for DNA replication; component of the pre-replicative complex (pre-RC) which requires ORC to associate with chromatin and is in turn required for Mcm2-7p DNA association; dual role as a mitotic cyclin-dependent kinase inhibitor, that binds to and inhibits Cdc28p/Clb2p along with Sic1p, contributing to mitotic exit; homologous to S. pombe Cdc18p; relocalizes from nucleus to cytoplasm upon DNA replication stress; degraded in response to plasma membrane stress","termid":"PBO:0113122"}


id: PBO:0049891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 10","termid":"PBO:0049891"}


id: PBO:0091031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1","termid":"PBO:0091031"}


id: GO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurochenodeoxycholate + O2 + reduced [NADPH--hemoprotein reductase] +  = taurohyocholate H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Acts on taurochenodeoxycholate, taurodeoxycholate and less readily on lithocholate and chenodeoxycholate.","definition_xrefs":["EC:1.14.14.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taurochenodeoxycholate 6alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7977"],"synonyms":[{"name":"CYP3A4","type":"related"},{"name":"CYP4A21","type":"related"},{"name":"taurochenodeoxycholate 6alpha-monooxygenase activity","type":"related"},{"name":"taurochenodeoxycholate,NADPH:oxygen oxidoreductase (6alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033780"}


id: GO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of various polypeptides into the exocyst complex.","definition_xrefs":["Wikipedia:Exocyst","GOC:hjd","PMID:9700152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0140056","GO:0044085","GO:0008150","GO:0016192","GO:0065003","GO:0006810"],"is_obsolete":false,"name":"exocyst assembly","termid":"GO:0001927"}


id: PBO:0070631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 2","termid":"PBO:0070631"}


id: MONDO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary breast ovarian cancer syndrome in which the cause of the disease is a mutation in the BRCA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"},{"relation_name":"is_a","term_name":"BRCA1-related cancer predisposition","termid":"MONDO:0700268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 1","secondary_identifiers":["MEDGEN:382914","UMLS:C2676676","GARD:12351","OMIM:604370"],"synonyms":[{"name":"BRCA1 hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"BROVCA1","type":"related"},{"name":"breast cancer, familial, susceptibility to, 1","type":"related"},{"name":"breast-ovarian cancer, familial, 1, multifactorial","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, 1","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, type 1","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in BRCA1","type":"exact"},{"name":"ovarian cancer, familial, susceptibility to, 1","type":"related"},{"name":"susceptibility to familial breast-ovarian cancer 1","type":"related"}],"termid":"MONDO:0011450","xrefs":{"Monarch":{"xref_id":"0011450"}}}


id: PBO:0080842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 6","termid":"PBO:0080842"}


id: MONDO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"renal hypomagnesemia 6","secondary_identifiers":["UMLS:C3151295","DOID:0060884","GARD:12155","MEDGEN:462645","OMIM:613882"],"synonyms":[{"name":"HOMG6","type":"exact"},{"name":"hypomagnesemia 6, renal","type":"related"},{"name":"renal hypomagnesemia type 6","type":"exact"},{"name":"renal hypomagnesemia-6","type":"related"}],"termid":"MONDO:0013480","xrefs":{"Monarch":{"xref_id":"0013480"}}}


id: GO:1902616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which O-acyl-L-carnitine is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"O-acyl-L-carnitine transmembrane transport","synonyms":[{"name":"O-acylcarnitine transmembrane transport","type":"exact"}],"termid":"GO:1902616"}


id: MONDO:0016833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"14q12 microdeletion syndrome is a recently described syndrome characterized by severe intellectual deficit, with a normal neonatal period, followed by a phase of regression at the age of 3-6 months.","definition_xrefs":["Orphanet:261144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14q12 microdeletion syndrome","secondary_identifiers":["SCTID:719574007","UMLS:C4305240","MEDGEN:930909","GARD:20771"],"synonyms":[{"name":"Del(14)(q12)","type":"exact"},{"name":"monosomy 14q12","type":"exact"}],"termid":"MONDO:0016833","xrefs":{"Monarch":{"xref_id":"0016833"}}}


id: GO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.","definition_xrefs":["PMID:24520058","PMID:1804402","PMID:10689197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"L-proline betaine metabolic process","termid":"GO:0019502"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-proline betaine catabolic process","secondary_identifiers":["MetaCyc:P561-PWY"],"synonyms":[{"name":"stachydrine breakdown","type":"exact"},{"name":"stachydrine catabolic process","type":"exact"},{"name":"stachydrine catabolism","type":"exact"},{"name":"stachydrine degradation","type":"exact"}],"termid":"GO:0019504"}


id: GO:0032633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-4 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-4 production","secondary_identifiers":["GO:0042097","GO:0042224","GO:0072602"],"synonyms":[{"name":"IL-4 production","type":"exact"},{"name":"interleukin-4 biosynthetic process","type":"narrow"},{"name":"interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032633"}


id: MONDO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a crustacean food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete crustacean allergy (obsolete MONDO:0000799)","secondary_identifiers":["DOID:0060524"],"synonyms":[{"name":"allergy of crustacean food product","type":"exact"},{"name":"crustacean food product allergic disease","type":"exact"}],"termid":"MONDO:0000799","xrefs":{"Monarch":{"xref_id":"0000799"}}}


id: GO:0050098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methylguanidine = methylammonium + urea.","definition_xrefs":["EC:3.5.3.16","RHEA:11764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"methylguanidinase activity","secondary_identifiers":["MetaCyc:METHYLGUANIDINASE-RXN","KEGG_REACTION:R01589"],"synonyms":[{"name":"methylguanidine amidinohydrolase activity","type":"related"},{"name":"methylguanidine hydrolase activity","type":"related"}],"termid":"GO:0050098"}


id: MONDO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Increased intracellular or extracellular fluid in brain tissue. Cytotoxic brain edema (swelling due to increased intracellular fluid) is indicative of a disturbance in cell metabolism, and is commonly associated with hypoxic or ischemic injuries (see hypoxia, brain). An increase in extracellular fluid may be caused by increased brain capillary permeability (vasogenic edema), an osmotic gradient, local blockages in interstitial fluid pathways, or by obstruction of csf flow (e.g., obstructive hydrocephalus). (From Childs Nerv Syst 1992 Sep; 8(6):301-6)","definition_xrefs":["MESH:D001929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain edema","secondary_identifiers":["DOID:4724","SCTID:2032001","EFO:1000845","ICD9:348.5","MedDRA:10006121","MEDGEN:2337","UMLS:C0006114"],"synonyms":[{"name":"intracranial swelling","type":"exact"},{"name":"wet brain","type":"exact"}],"termid":"MONDO:0006684","xrefs":{"Monarch":{"xref_id":"0006684"}}}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-galactose 6-phosphate 1-epimerase activity (obsolete GO:0102541)","termid":"GO:0102541"}


id: PBO:0056498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 2B","termid":"PBO:0056498"}


id: GO:0032221
data:
  {"annotated_genes":["SJAG_00349","SJAG_04758","SJAG_01804","SJAG_01110","SJAG_00581","SJAG_03884"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63686,74481,74734,78371,95673,97360],"is_not":false,"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved histone deacetylase complex which deacetylates histones across gene coding regions. Composed of a catalytic histone deacetylase subunit, a chromodomain protein, a SIN3 family co-repressor, and a WD repeat protein (Clr6p, Alp13p, Pst2p, and Prw1p respectively in Schizosaccharomyces; Rpd3p, Sin3p, Ume1p, Rco1p and Eaf3 in Saccharomyces; homologs thereof in other species).","definition_xrefs":["PMID:12773392","PMID:17450151","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00581":null,"SJAG_01110":null,"SJAG_01804":null,"SJAG_03884":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Rpd3S complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000509"],"synonyms":[{"name":"Clr6 histone deacetylase complex II","type":"exact"},{"name":"Clr6 histone deacetylase complex II'","type":"exact"},{"name":"Clr6-CII complex","type":"exact"},{"name":"Clr6S complex","type":"exact"},{"name":"Rpd3C(S)","type":"exact"},{"name":"Rpd3S","type":"exact"},{"name":"Sin3S","type":"exact"}],"termid":"GO:0032221","terms_by_termid":{"GO:0032221":null}}


id: GO:0009543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cavity enclosed within the chloroplast thylakoid membrane. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0943088399","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"chloroplast thylakoid","termid":"GO:0009534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid lumen","termid":"GO:0009543"}


id: MONDO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss characterized by a combination of conductive and sensorineural hearing loss. It is caused by problems in both the inner ear and middle or outer ear.","definition_xrefs":["NCIT:C26974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, mixed conductive-sensorineural","secondary_identifiers":["UMLS:C0155552","MESH:D046089","SCTID:77507001","MEDGEN:102336"],"synonyms":[{"name":"Losses, mixed hearing","type":"related"},{"name":"hearing loss, mixed","type":"related"},{"name":"hearing loss, mixed conductive sensorineural","type":"related"},{"name":"loss, mixed hearing","type":"related"},{"name":"mixed conductive and sensorineural deafness","type":"exact"},{"name":"mixed conductive and sensorineural hearing loss","type":"exact"},{"name":"mixed deafness","type":"related"},{"name":"mixed hearing loss","type":"exact"},{"name":"mixed type deafness","type":"related"}],"termid":"MONDO:0044001","xrefs":{"Monarch":{"xref_id":"0044001"}}}


id: PBO:0065460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 6","termid":"PBO:0065460"}


id: MOD:01580
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01580"}


id: PBO:0081611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 536","termid":"PBO:0081611"}


id: PBO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 26","termid":"PBO:0072149"}


id: GO:0160239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription halt following transcription initiation but prior to elongation, during which RNA polymerase II pauses approximately 20-60 nucleotides downstream of the transcriptional start site before proceeding into productive elongation. Transcription pausing starts following phosphorylation of the C-terminal domain (CTD) of RNA polymerase II subunit POLR2A at Ser-5 and stops following phosphorylation of POLR2A by the P-TEFb complex.","definition_xrefs":["PMID:35816930","PMID:33271312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription pausing by RNA polymerase II","synonyms":[{"name":"promoter proximal pausing by RNA polymerase II","type":"exact"}],"termid":"GO:0160239"}


id: PBO:0086874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative subunit of the 90S preribosome processome complex; overexpression rescues supressor mutant of mcm10; null mutant is viable; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0086874"}


id: PBO:0088183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster transcription factor that regulates respiratory growth; binds to promoters of genes involved in respiration, gluconeogenesis, and the glyoxylate shunt; required for normal carbon source utilization and adaptation to pH, osmotic and ethanol stress especially during non-fermentative metabolism","termid":"PBO:0088183"}


id: MOD:00127
data:
  {"annotated_genes":["SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82443],"is_not":false,"summary":null,"term":"MOD:00127"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-lipoyl-L-lysine.","definition_xrefs":["PubMed:3522581","Unimod:42#K","DeltaMass:0","PubMed:3421911","OMSSA:67","PubMed:7719855","RESID:AA0118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-lipoyl-L-lysine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-6-(5-[(3R)-1,2-dithiolan-3-yl]pentanamido)hexanoic acid","type":"exact"},{"name":"(2S)-2-amino-6-[(5-[(3R)-1,2-dithiolan-3-yl]pentanoyl)amino]hexanoic acid","type":"exact"},{"name":"(2S,6'R)-2-amino-6-(6,8-dithiooctanamido)hexanoic acid","type":"exact"},{"name":"2-amino-6-(5-[1,2-dithiolan-3-yl]-1-oxopentyl)aminohexanoic acid","type":"exact"},{"name":"Lipoyl","type":"related"},{"name":"MOD_RES N6-lipoyllysine","type":"exact"},{"name":"N-Lipoyl- (on Lysine)","type":"exact"},{"name":"N6-6,8-dithiooctanoyllysine","type":"exact"},{"name":"N6-lipoyl-L-lysine","type":"exact"},{"name":"N6-lipoyllysine","type":"exact"},{"name":"N6LipLys","type":"exact"},{"name":"lipoylk","type":"exact"}],"termid":"MOD:00127","terms_by_termid":{"MOD:00127":null}}


id: MONDO:0023097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete exostoses anetodermia brachydactyly type E (obsolete MONDO:0023097)","termid":"MONDO:0023097","xrefs":{"Monarch":{"xref_id":"0023097"}}}


id: SO:0001749
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL4 RNA leader sequence to the 5' end of an mRNA. SL4 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL4_acceptor_site","synonyms":[{"name":"SL4 acceptor site","type":"exact"}],"termid":"SO:0001749"}


id: PBO:0072739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A4","termid":"PBO:0072739"}


id: PBO:0066846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 146","termid":"PBO:0066846"}


id: PBO:0077692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 3","termid":"PBO:0077692"}


id: PBO:0067411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 521, pseudogene","termid":"PBO:0067411"}


id: MONDO:0009034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniofacial dyssynostosis (CFD) is a rare cranial malformation syndrome characterized by the premature closure of both lambdoid sutures and the posterior sagittal suture, resulting in abnormal skull contour (frontal bossing, anterior turricephaly with mild brachycephaly, biparietal narrowing, occipital concavity) and dysmorphic facial features (low-set ears, midfacial hypoplasia). Short stature, developmental delay, epilepsy, and oculomotor dyspraxia have also been reported. Associated anomalies include enlargement of the cerebral ventricles, agenesis of the corpus callosum, Arnold-Chiari malformation type I, venous anomalies of skull and hydrocephalus.","definition_xrefs":["Orphanet:1516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dyssynostosis","secondary_identifiers":["MEDGEN:347473","OMIM:218350","UMLS:C1857511","GARD:1575","MESH:C536455"],"synonyms":[{"name":"bilateral lambdoid and sagittal synostosis","type":"related"},{"name":"craniofacial dyssynostosis and short stature","type":"related"},{"name":"craniofacial dyssynostosis with short stature","type":"related"},{"name":"craniosynostosis-craniofacial dysostosis syndrome","type":"related"}],"termid":"MONDO:0009034","xrefs":{"Monarch":{"xref_id":"0009034"}}}


id: PBO:0075738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 19","termid":"PBO:0075738"}


id: GO:0106227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glutarylation of a lysine residue in a protein.","definition_xrefs":["PMID:31542297","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine glutarylation","termid":"GO:0106227"}


id: GO:0035670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an ovary that produces an ovule over time, from its formation to the mature structure. The ovary is the enlarged basal portion of a carpel and matures into a fruit. An ovule is the multicellular structure that gives rise to and contains the female reproductive cells, and develops into a seed.","definition_xrefs":["GOC:bf","ISBN:0879015322","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type ovary development","termid":"GO:0035670"}


id: PBO:0002974
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K(m)=63 microM","termid":"PBO:0002974"}


id: MONDO:1010421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, sheep","secondary_identifiers":["OMIA:000703-9940"],"termid":"MONDO:1010421","xrefs":{"Monarch":{"xref_id":"1010421"}}}


id: GO:0042211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aerobic chemical reactions and pathways resulting in the breakdown of dimethylsilanediol, the smallest member of the dialkylsilanediols. Dimethylsilanediol is the monomer of polydimethylsiloxane, a compound which can be found in a wide range of industrial and consumer products.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic organosilicon metabolic process","termid":"GO:0018946"},{"relation_name":"is_a","term_name":"dimethylsilanediol metabolic process","termid":"GO:0046454"},{"relation_name":"is_a","term_name":"organosilicon catabolic process","termid":"GO:0046455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dimethylsilanediol catabolic process","synonyms":[{"name":"catabolic process of DMSD","type":"exact"},{"name":"catabolism of DMSD","type":"exact"},{"name":"degradation of dimethylsilanediol","type":"exact"},{"name":"dimethylsilanediol breakdown","type":"exact"},{"name":"dimethylsilanediol catabolism","type":"exact"},{"name":"dimethylsilanediol degradation","type":"exact"}],"termid":"GO:0042211"}


id: PBO:0083448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BUD31","termid":"PBO:0083448"}


id: PBO:0068780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 17, pseudogene","termid":"PBO:0068780"}


id: GO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the development of the umbilical cord, from its formation to the mature structure. The umbilical cord is an organ or embryonic origin consisting of the 2 umbilical arteries and the one umbilical vein. The umbilical cord connects the cardiovascular system of the fetus to the mother via the placenta.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"umbilical cord development","termid":"GO:0061027"}


id: PBO:0084123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl2p and Esl1p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; interacts with Pex14p; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; ESL2 has a paralog, ESL1, that arose from the whole genome duplication","termid":"PBO:0084123"}


id: PBO:0090974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase Alg3","termid":"PBO:0090974"}


id: GO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neurectodermal cell to a specialized neurectodermal cell that will give rise to the optic vesicle.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in eye field cell fate commitment of camera-type eye (obsolete GO:0060899)","termid":"GO:0060899"}


id: PBO:0080539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASL divergent transcript","termid":"PBO:0080539"}


id: PBO:0050017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DM beta","termid":"PBO:0050017"}


id: GO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with intermediate filaments and function in the supramolecular organization of cellular intermediate filament networks.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete intermediate filament associated protein (obsolete GO:0001721)","synonyms":[{"name":"IFAP","type":"exact"},{"name":"intermediate filament associated protein","type":"exact"}],"termid":"GO:0001721"}


id: PBO:0004730
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.3.1.19","termid":"PBO:0004730"}


id: MONDO:0009155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"EEM syndrome is characterized by the association of ectodermal dysplasia, ectrodactyly, and macular dystrophy. So far, it has been described in individuals from seven families. Hypotrichosis, dental anomalies and absent eyebrows have also been reported. EMM syndrome appears to be transmitted as an autosomal recessive trait and may be caused by mutations in the cadherin-3 gene (CH3, 16q22.1).","definition_xrefs":["Orphanet:1897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005497","MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"EEM syndrome","secondary_identifiers":["OMIM:225280","DOID:0111649","MEDGEN:341679","GARD:2078","SCTID:720856002","MESH:C536190","UMLS:C1857041"],"synonyms":[{"name":"EEM syndrome","type":"exact"},{"name":"EEMS","type":"related"},{"name":"ectodermal dysplasia, ectrodactyly, and macular dystrophy","type":"related"},{"name":"ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome","type":"related"},{"name":"ectodermal dysplasia-ectrodactyly-macular dystrophy syndrome","type":"exact"}],"termid":"MONDO:0009155","xrefs":{"Monarch":{"xref_id":"0009155"}}}


id: PBO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000047"}


id: MONDO:0011756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the NPHP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"Senior-Loken syndrome 4","secondary_identifiers":["GARD:15406","OMIM:606996","MESH:C537581","UMLS:C1846979","MEDGEN:337697"],"synonyms":[{"name":"NPHP4 Senior-Loken syndrome","type":"exact"},{"name":"SENIOR-Loken syndrome 4","type":"related"},{"name":"SLSN4","type":"related"},{"name":"Senior-Loken syndrome 4","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in NPHP4","type":"exact"},{"name":"Senior-Loken syndrome type 4","type":"exact"}],"termid":"MONDO:0011756","xrefs":{"Monarch":{"xref_id":"0011756"}}}


id: PR:O74791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein-like 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase grn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.08c","secondary_identifiers":["UniProtKB:O74791"],"synonyms":[{"name":"GTPase in ribosomal export from the nucleolus protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GNL3","type":"exact"},{"name":"nuclear GTP-binding protein grn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74791"}


id: PR:O59744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.08","synonyms":[{"name":"Spom972h-SPBC530.08","type":"exact"}],"termid":"PR:O59744"}


id: PBO:0031351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caspofungin","termid":"PBO:0031351"}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: MONDO:0007955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital pouch in the distal ileum. It may cause painless rectal bleeding and bowel obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulum","secondary_identifiers":["DOID:9487","ICD9:751.0","MedDRA:10027055","NCIT:C12264","MEDGEN:9917","icd11.foundation:216192536","OMIM:155140","EFO:1001036","MESH:D008467","UMLS:C0025037","SCTID:37373007"],"synonyms":[{"name":"Meckel diverticulum","type":"exact"},{"name":"Meckel's diverticulum","type":"exact"},{"name":"persistent vitelline duct","type":"exact"}],"termid":"MONDO:0007955","xrefs":{"Monarch":{"xref_id":"0007955"}}}


id: GO:0090306
data:
  {"annotated_genes":["SJAG_03073","SJAG_01546","SJAG_01613","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96681,98692],"is_not":false,"summary":null,"term":"GO:0090306"},{"annotations":[103382,101151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of meiosis.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0007010","GO:0140013","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"meiotic spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in meiosis","type":"exact"}],"termid":"GO:0090306","terms_by_termid":{"GO:0090306":null,"GO:0140642":null}}


id: PBO:0059478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylsterol monooxygenase 1","termid":"PBO:0059478"}


id: PBO:0039434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANK3 divergent transcript","termid":"PBO:0039434"}


id: MONDO:0021131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor affecting the frontal lobe of the brain.","definition_xrefs":["NCIT:C131573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe neoplasm","termid":"MONDO:0001421"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal lobe ependymal tumor","secondary_identifiers":["UMLS:C4330009","MEDGEN:1391114"],"synonyms":[{"name":"ependymal tumor of frontal lobe","type":"exact"},{"name":"ependymal tumour of frontal lobe","type":"exact"},{"name":"frontal lobe ependymal tumor","type":"exact"}],"termid":"MONDO:0021131","xrefs":{"Monarch":{"xref_id":"0021131"}}}


id: PBO:0048138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 2","termid":"PBO:0048138"}


id: PBO:0067028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 41, pseudogene","termid":"PBO:0067028"}


id: PBO:0072444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 8","termid":"PBO:0072444"}


id: PBO:0031051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_metabolic_process_during_vegetative_growth","termid":"PBO:0031051"}


id: PATO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000255 taste_acuity (obsolete PATO:0000255)","termid":"PATO:0000255"}


id: PBO:0089881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase Ags1","termid":"PBO:0089881"}


id: PR:Q9P544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1635.01 gene.","definition_xrefs":["UniProtKB:Q9P544","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein porin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1635.01","synonyms":[{"name":"Spom972h-SPAC1635.01","type":"exact"}],"termid":"PR:Q9P544"}


id: PBO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog ATP-dependent DNA helicase/ ubiquitin protein ligase E3 Rhp16","termid":"PBO:0018105"}


id: PBO:0075727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRM pseudogene 3","termid":"PBO:0075727"}


id: GO:0018386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The condensation of pyruvate through the 2-oxo group with the N-terminal cysteine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-cysteine.","definition_xrefs":["RESID:AA0274"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-cysteine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-cysteine (obsolete GO:0018386)","termid":"GO:0018386"}


id: PBO:0045771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 2","termid":"PBO:0045771"}


id: PBO:0028844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0028844"}


id: GO:0051083
data:
  {"annotated_genes":["SJAG_04784","SJAG_01510","SJAG_03094","SJAG_00750","SJAG_01664","SJAG_05206","SJAG_03237","SJAG_00112","SJAG_03267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76650,81685,89343,100485,102647,105668,106642,119668,119769],"is_not":false,"summary":null,"term":"GO:0051083"}]},"cv_name":"biological_process","definition":"The process of assisting in the correct noncovalent assembly of the ribosome-bound nascent chains of a multidomain protein whilst other parts of the protein are still being translated.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' protein folding","termid":"GO:0006458"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00750":null,"SJAG_01510":null,"SJAG_01664":null,"SJAG_03094":null,"SJAG_03237":null,"SJAG_03267":null,"SJAG_04784":null,"SJAG_05206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006457","GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"'de novo' cotranslational protein folding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006444"],"synonyms":[{"name":"'de novo' co-translational protein folding","type":"exact"},{"name":"multidomain protein assembly","type":"exact"},{"name":"nascent polypeptide association","type":"exact"}],"termid":"GO:0051083","terms_by_termid":{"GO:0051083":null}}


id: MONDO:0850388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood embryonal tumor with multilayered rosettes, C19MC-altered that arises from the supratentorial brain and occurs in children.","definition_xrefs":["DOID:0080956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric cerebral ependymoblastoma","termid":"MONDO:0004378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood supratentorial embryonal tumor with multilayered rosettes, C19MC-altered","secondary_identifiers":["NCIT:C6772","UMLS:C4316809","MEDGEN:1375924"],"termid":"MONDO:0850388","xrefs":{"Monarch":{"xref_id":"0850388"}}}


id: GO:0010908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis. Heparan sulfate proteoglycan biosynthetic processes are the chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, which consists of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010908"}


id: MONDO:0004132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the mucosa of the anal canal.","definition_xrefs":["NCIT:C7469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal squamous cell carcinoma","termid":"MONDO:0006082"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal squamous cell carcinoma","secondary_identifiers":["Orphanet:424019","UMLS:C1332262","GARD:21774","icd11.foundation:585238371","DOID:7177","MEDGEN:233979"],"synonyms":[{"name":"anal canal squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the anal canal","type":"exact"}],"termid":"MONDO:0004132","xrefs":{"Monarch":{"xref_id":"0004132"}}}


id: GO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-16 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-16 receptor binding","synonyms":[{"name":"IL-16","type":"narrow"},{"name":"interleukin-16 receptor ligand","type":"narrow"}],"termid":"GO:0045514"}


id: GO:0052675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NADP+ = 3-methylbutanal + NADPH + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["RHEA:18525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"},{"relation_name":"is_a","term_name":"3-methylbutanal reductase [NAD(P)H] activity","termid":"GO:0046568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-methylbutanal reductase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R05686"],"synonyms":[{"name":"3-methylbutanal reductase (NADP) activity","type":"exact"},{"name":"3-methylbutanol:NADP oxidoreductase activity","type":"exact"},{"name":"3-methylbutanol:NADP+ oxidoreductase activity","type":"related"},{"name":"3-methylbutyraldehyde reductase (NADP) activity","type":"exact"},{"name":"isoamyl alcohol oxidase (NADP) activity","type":"exact"}],"termid":"GO:0052675"}


id: PBO:0076894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 48","termid":"PBO:0076894"}


id: GO:0010539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the Hsp27 molecular chaperone.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp27 protein inhibitor activity (obsolete GO:0010539)","synonyms":[{"name":"Hsp27 protein inhibitor activity","type":"exact"}],"termid":"GO:0010539"}


id: MONDO:0012998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciocardiomelic syndrome","secondary_identifiers":["MEDGEN:436265","MESH:C567176","UMLS:C2674798","OMIM:612731"],"synonyms":[{"name":"faciocardiomelic syndrome","type":"exact"}],"termid":"MONDO:0012998","xrefs":{"Monarch":{"xref_id":"0012998"}}}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: PR:Q9C0Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps602 gene.","definition_xrefs":["UniProtKB:Q9C0Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.12","synonyms":[{"name":"Spom972h-rps602","type":"exact"}],"termid":"PR:Q9C0Z7"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: FYPO:0006962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-N-acetylglucosamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular UDP-N-acetylglucosamine level","synonyms":[{"name":"increased UDP-N-acetylglucosamine accumulation","type":"related"},{"name":"increased cellular UDP-N-acetyl-alpha-D-glucosamine level","type":"exact"},{"name":"increased cellular UDP-N-acetylglucosamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular UDP-N-acetylglucosamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006962"}


id: PBO:0091110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 for HECT-type and RBR family E3 Ub ligases, Ubc14","termid":"PBO:0091110"}


id: GO:0046918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal glycine residue to form N-palmitoyl-glycine.","definition_xrefs":["RESID:AA0339"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glycine N-palmitoylation (obsolete GO:0046918)","termid":"GO:0046918"}


id: PBO:0059491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1","termid":"PBO:0059491"}


id: PBO:0044460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 59, pseudogene","termid":"PBO:0044460"}


id: PBO:0071515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 18","termid":"PBO:0071515"}


id: PBO:0078508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 2","termid":"PBO:0078508"}


id: MONDO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the colon.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"colitis","secondary_identifiers":["SCTID:64226004","UMLS:C0009319","EFO:0003872","MESH:D003092","ICD9:558.9","MEDGEN:40385","NCIT:C26723","DOID:0060180","HP:0002583"],"synonyms":[{"name":"colitis","type":"exact"},{"name":"colitis (disease)","type":"exact"},{"name":"colon inflammation","type":"exact"},{"name":"inflammation of colon","type":"exact"}],"termid":"MONDO:0005292","xrefs":{"Monarch":{"xref_id":"0005292"}}}


id: PBO:0005796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation (predicted)","termid":"PBO:0005796"}


id: PBO:0067628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 800, pseudogene","termid":"PBO:0067628"}


id: PBO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"appears to be truncated","termid":"PBO:0000060"}


id: MONDO:0024430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder in which a sensory stimulus, usually tactile but more rarely other sensory modalities, is misperceived in a location distant from the original stimulus.","definition_xrefs":["MESH:D066190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allesthesia","secondary_identifiers":["UMLS:C3850010","MEDGEN:827104"],"synonyms":[{"name":"Allachesthesia","type":"related"},{"name":"Allachesthesias","type":"related"},{"name":"Allesthesias","type":"related"},{"name":"Alloesthesia","type":"related"},{"name":"Alloesthesias","type":"related"},{"name":"Dyschirias","type":"related"},{"name":"allochiria","type":"related"},{"name":"dyschiria","type":"related"},{"name":"false allochiria","type":"related"}],"termid":"MONDO:0024430","xrefs":{"Monarch":{"xref_id":"0024430"}}}


id: PBO:0004930
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.284","termid":"PBO:0004930"}


id: GO:0044780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"bacterial-type flagellum organization","termid":"GO:0044781"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bacterial-type flagellum assembly","synonyms":[{"name":"bacterial flagellum assembly","type":"exact"}],"termid":"GO:0044780"}


id: GO:0034411
data:
  {"annotated_genes":["SJAG_04771","SJAG_01835","SJAG_04668","SJAG_00218","SJAG_00876","SJAG_01288","SJAG_01290","SJAG_02222","SJAG_03587","SJAG_01787","SJAG_05285","SJAG_04462","SJAG_04666","SJAG_04483","SJAG_01255","SJAG_00610","SJAG_03705","SJAG_04659"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[76285,93490,117841,72818,74766,115173,77638,108074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[89378,94313],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[94297,119939,69405,120072,107309,107883,92652],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"},{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cell wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"cell wall beta-1,3-glucan formation","type":"exact"},{"name":"cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034411","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0051754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 3","termid":"PBO:0051754"}


id: PBO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi/Snf RSC","termid":"PBO:0000641"}


id: PBO:0072427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 1","termid":"PBO:0072427"}


id: PBO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39","termid":"PBO:0005577"}


id: PBO:0047934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, rare, fra(12)(q24.2)","termid":"PBO:0047934"}


id: PR:Q9Y7Q7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC297.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain-containing protein C297.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.05","synonyms":[{"name":"Spom972h-SPCC297.05","type":"exact"}],"termid":"PR:Q9Y7Q7"}


id: PBO:0005043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1751 family protein","termid":"PBO:0005043"}


id: GO:0102749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + dihydrogeranylgeranyl-chlorophyll a + NADPH = tetrahydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrogeranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102749)","termid":"GO:0102749"}


id: MONDO:0010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TMC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 7","secondary_identifiers":["UMLS:C1832978","DOID:0110520","GARD:22587","MEDGEN:322084","MESH:C563417","OMIM:600974"],"synonyms":[{"name":"DFNB11","type":"narrow"},{"name":"DFNB7","type":"narrow"},{"name":"TMC1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TMC1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 7","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 7","type":"exact"},{"name":"deafness, autosomal recessive 11","type":"narrow"},{"name":"deafness, autosomal recessive 7","type":"narrow"},{"name":"deafness, autosomal recessive type 7","type":"narrow"}],"termid":"MONDO:0010967","xrefs":{"Monarch":{"xref_id":"0010967"}}}


id: GO:0097657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-nucleoside bisphosphate + H20 = 5'-nucleoside monophosphate + phosphate.","definition_xrefs":["RHEA:43532","PMID:24401123","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"3',5'-nucleotide bisphosphate phosphatase activity","secondary_identifiers":["EC:3.1.3.97"],"termid":"GO:0097657"}


id: GO:0050400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + xylitol = ADP + 2 H+ + xylitol 5-phosphate.","definition_xrefs":["EC:2.7.1.122","RHEA:20209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylitol kinase activity","secondary_identifiers":["KEGG_REACTION:R02136","MetaCyc:XYLITOL-KINASE-RXN"],"synonyms":[{"name":"ATP:xylitol 5-phosphotransferase activity","type":"related"},{"name":"xylitol phosphotransferase activity","type":"related"}],"termid":"GO:0050400"}


id: PR:Q9UTD7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RRP15-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.02c","secondary_identifiers":["UniProtKB:Q9UTD7"],"synonyms":[{"name":"SPAC227.02c","type":"related"},{"name":"Spom972h-RRP15","type":"exact"}],"termid":"PR:Q9UTD7"}


id: PBO:0064635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase pseudogene 1","termid":"PBO:0064635"}


id: MONDO:0018897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous T-cell lymphoma","termid":"MONDO:0015816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous CD30+ T-cell lymphoproliferative disease","secondary_identifiers":["NCIT:C7195","UMLS:C5679826","icd11.foundation:1046496266","GARD:18697","MedDRA:10065863","Orphanet:541","MEDGEN:1843249"],"synonyms":[{"name":"primary cutaneous Ki-1+ T-cell lymphoproliferative disease","type":"exact"}],"termid":"MONDO:0018897","xrefs":{"Monarch":{"xref_id":"0018897"}}}


id: GO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"carbohydrate phosphorylation","termid":"GO:0046835"}


id: MONDO:0022825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cystic eye","secondary_identifiers":["icd11.foundation:2061090928","MEDGEN:510582","UMLS:C0158543","Orphanet:519384","GARD:10617"],"synonyms":[{"name":"CCE","type":"related"}],"termid":"MONDO:0022825","xrefs":{"Monarch":{"xref_id":"0022825"}}}


id: PBO:0113222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis; represses mitochondrial function; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; TIS11 has a paralog, CTH1, that arose from the whole genome duplication","termid":"PBO:0113222"}


id: PBO:0005414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32 (predicted)","termid":"PBO:0005414"}


id: PBO:0113817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase","termid":"PBO:0113817"}


id: FYPO:0007904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glucan synthesis","synonyms":[{"name":"abnormal glucan biosynthetic process","type":"exact"},{"name":"beta-glucan synthesis defective","type":"exact"}],"termid":"FYPO:0007904"}


id: GO:0018550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3,5,6-tetrachlorohydroquinone + 2 glutathione = 2,3,6-trichlorohydroquinone + glutathione disulfide + HCl.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachloro-p-hydroquinone reductive dehalogenase activity (obsolete GO:0018550)","synonyms":[{"name":"tetrachlorohydroquinone reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018550"}


id: MONDO:0005551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An allergic disease involving a pathogenic inflammatory response in the camera-type eye.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"eye allergy","secondary_identifiers":["MEDGEN:1843485","EFO:0005751","UMLS:C0852875"],"termid":"MONDO:0005551","xrefs":{"Monarch":{"xref_id":"0005551"}}}


id: PBO:0080652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 1","termid":"PBO:0080652"}


id: PBO:0086640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YDR476C is not an essential gene","termid":"PBO:0086640"}


id: MONDO:0013460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the SP7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 12","secondary_identifiers":["DOID:0110348","GARD:15722","UMLS:C3151433","MEDGEN:462783","OMIM:613849"],"synonyms":[{"name":"OI, type 12","type":"related"},{"name":"OI12","type":"exact"},{"name":"SP7 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in SP7","type":"exact"},{"name":"osteogenesis imperfecta type XII","type":"exact"},{"name":"osteogenesis imperfecta, type 12","type":"related"},{"name":"osteogenesis imperfecta, type XII","type":"related"}],"termid":"MONDO:0013460","xrefs":{"Monarch":{"xref_id":"0013460"}}}


id: GO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the reorganization of tissue resulting in the maturation of the atrial ventricular junction.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"atrial ventricular junction remodeling","termid":"GO:0003294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in atrial ventricular junction remodeling","synonyms":[{"name":"apoptosis involved in atrial ventricular junction remodelling","type":"exact"},{"name":"apoptosis involved in atrio-ventricular junction remodeling","type":"exact"},{"name":"apoptosis involved in atrio-ventricular junction remodelling","type":"exact"},{"name":"apoptosis involved in atrioventricular junction remodeling","type":"exact"},{"name":"apoptosis involved in atrioventricular junction remodelling","type":"exact"}],"termid":"GO:0003296"}


id: MONDO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm primarily involving the thyroid gland.","definition_xrefs":["NCIT:C6041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid cancer","termid":"MONDO:0002108"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid sarcoma","secondary_identifiers":["MEDGEN:234950","UMLS:C1336756","DOID:4515"],"synonyms":[{"name":"sarcoma of the thyroid","type":"exact"},{"name":"sarcoma of the thyroid gland","type":"exact"},{"name":"sarcoma of thyroid","type":"exact"},{"name":"sarcoma of thyroid gland","type":"exact"},{"name":"thyroid gland sarcoma","type":"exact"},{"name":"thyroid sarcoma","type":"exact"}],"termid":"MONDO:0003028","xrefs":{"Monarch":{"xref_id":"0003028"}}}


id: GO:0045327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-tyrosine (obsolete GO:0045327)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-tyrosine","type":"exact"}],"termid":"GO:0045327"}


id: PBO:0045255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 1","termid":"PBO:0045255"}


id: MONDO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A human immunodeficiency characterized by early-onset life-threatening infections, combined T and B cell immunodeficiency, severe neutrophil defects, and impaired platelet aggregation, caused by a variation in the SLP76 gene.","definition_xrefs":["PMID:33231617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 81","secondary_identifiers":["UMLS:C5543540","OMIM:619374","MEDGEN:1788669"],"synonyms":[{"name":"IMD81","type":"exact"},{"name":"T-B+ severe combined immunodeficiency due to SLP76 deficiency","type":"exact"},{"name":"immunodeficiency 81","type":"exact"}],"termid":"MONDO:0030302","xrefs":{"Monarch":{"xref_id":"0030302"}}}


id: PBO:0030883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030883"}


id: GO:1905887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol (autoinducer AI-2) is transported across a membrane. AI-2 is produced by prokaryotes and is believed to play a role in quorum sensing.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:15601708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"autoinducer AI-2 transmembrane transport","synonyms":[{"name":"(2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol transmembrane transport","type":"exact"},{"name":"AI-2 transmembrane transport","type":"exact"},{"name":"autoinducer 2 transmembrane transport","type":"exact"}],"termid":"GO:1905887"}


id: MOD:00514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex HexNAc","definition_xrefs":["Unimod:146","RESID:AA0151#var","PubMed:5490222","PubMed:111247","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)dHex(1)","type":"related"},{"name":"Hex1HexNAc1dHex1","type":"related"}],"termid":"MOD:00514"}


id: GO:0106107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-mevalonic acid biosynthetic process.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:24296663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"(R)-mevalonic acid biosynthetic process","termid":"GO:1901737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of (R)-mevalonic acid biosynthetic process","termid":"GO:0106107"}


id: MONDO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalised epilepsy that encompasses several common seizure phenotypes including childhood absence epilepsy, juvenile absence epilepsy, juvenile myoclonic epilepsy and epilepsy with generalized tonic-clonic seizures alone. These epilepsy syndromes have polygenic inheritance with or without environmental factors contributing to seizure susceptibility. Seizure types include one or a combination of absence seizures, myoclonic seizures and/or generalized tonic-clonic seizures.","definition_xrefs":["OMIM:600669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary generalized epilepsy","termid":"MONDO:0100576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"idiopathic generalized epilepsy","secondary_identifiers":["EFO:0005917","MESH:C562694","MEDGEN:75725","DOID:1827","SCTID:19598007","UMLS:C0270850","OMIMPS:600669"],"synonyms":[{"name":"EIG","type":"exact"},{"name":"IGE","type":"exact"},{"name":"epilepsy, idiopathic generalized","type":"exact"},{"name":"generalized epilepsy","type":"broad"},{"name":"hereditary idiopathic generalized epilepsy","type":"exact"},{"name":"idiopathic generalised epilepsy","type":"exact"},{"name":"idiopathic generalized epilepsy","type":"exact"}],"termid":"MONDO:0005579","xrefs":{"Monarch":{"xref_id":"0005579"}}}


id: PBO:0044595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4 like 1","termid":"PBO:0044595"}


id: MONDO:0859184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly and arthrogryposis","secondary_identifiers":["OMIM:619501","UMLS:C5561973","MEDGEN:1794183"],"termid":"MONDO:0859184","xrefs":{"Monarch":{"xref_id":"0859184"}}}


id: PBO:0030960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_outer_repeat","termid":"PBO:0030960"}


id: FYPO:0004912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin absent from cell","termid":"FYPO:0002722"},{"relation_name":"is_a","term_name":"decreased vacuolar phytochelatin level","termid":"FYPO:0004369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"phytochelatin absent from vacuole","synonyms":[{"name":"cadystin absent from vacuole","type":"exact"},{"name":"phytochelatin absent from vacuole during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0004912"}


id: FYPO:0005243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0005447","FYPO:0002058","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on glutamine nitrogen source","synonyms":[{"name":"increased growth on glutamine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0005243"}


id: GO:0120234
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A glycocalyx on the the endolymphatic surface of a cochlear hair cell that coats the external surface of each stereocilium and maintains a small distance between adjacent stereocilia in the bundle.","definition_xrefs":["PMID:31444330","GOC:krc","ISBN:9781461268918","PMID:3583936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium coat","synonyms":[{"name":"auditory hair cell glycocalyx","type":"broad"},{"name":"stereocilium glycocalyx","type":"exact"}],"termid":"GO:0120234"}


id: GO:0043369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell commits to CD4-positive T cell lineage or the CD8-positive lineage of alpha-beta T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell lineage commitment","termid":"GO:0002360"},{"relation_name":"part_of","term_name":"positive T cell selection","termid":"GO:0043368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive or CD8-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive or CD8-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive or CD8-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive/CD8-positive, alpha-beta T cell lineage commitment","type":"exact"}],"termid":"GO:0043369"}


id: PR:Q9P327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.09c/SPBC1348.10c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C977.09c/C1348.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.10c","synonyms":[{"name":"Spom972h-SPBC1348.10c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P327"}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: PBO:0039494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A17, pseudogene","termid":"PBO:0039494"}


id: GO:0180024
data:
  {"annotated_genes":["SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105681],"is_not":false,"summary":null,"term":"GO:0180024"}]},"cv_name":"molecular_function","definition":"An activity in which a protein, or group of proteins, acts to restrict the size of a fenestration in a membrane or membrane system (i.e. restrict the diameter of a hole in a membrane). An example of this is the molecular function is performed by ESCRT-III proteins at the nuclear envelope of fission yeast during anaphase B.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane grommet activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180024","terms_by_termid":{"GO:0180024":null}}


id: PBO:0067930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 232","termid":"PBO:0067930"}


id: PBO:0018249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor Fub1 (predicted)","termid":"PBO:0018249"}


id: GO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in nucleus","synonyms":[{"name":"maintenance of nuclear protein localization","type":"exact"},{"name":"maintenance of protein localization in nucleus","type":"related"},{"name":"maintenance of protein location in cell nucleus","type":"exact"},{"name":"nuclear protein retention","type":"narrow"},{"name":"nuclear protein sequestering","type":"narrow"},{"name":"nuclear protein sequestration","type":"narrow"},{"name":"protein retention in nucleus","type":"narrow"},{"name":"protein sequestration in nucleus","type":"narrow"},{"name":"protein storage in nucleus","type":"narrow"},{"name":"protein-nuclear retention","type":"narrow"},{"name":"sequestration of protein in nucleus","type":"narrow"},{"name":"storage of protein in nucleus","type":"narrow"}],"termid":"GO:0051457"}


id: GO:0071725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triacylated bacterial lipopeptide stimulus.","definition_xrefs":["GOC:add","PMID:12524386","PMID:2757794","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triacyl bacterial lipopeptide","synonyms":[{"name":"response to triacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071725"}


id: PATO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a medium by virtue of the bearer's tendency to hydronate a specific reference base.","definition_xrefs":["chemicool:chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium acidity","termid":"PATO:0001428"}


id: FYPO:0005788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased gene conversion during vegetative growth","synonyms":[{"name":"increased gene conversion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005788"}


id: MONDO:0005486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tooth disease characterized by failure to develop one or more missing teeth.","definition_xrefs":["DOID:0050591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis","secondary_identifiers":["MEDGEN:43794","EFO:0005410","GARD:16908","ICD10CM:K00.0","OMIMPS:106600","ICD9:520.0","Orphanet:99798","icd11.foundation:1559717619","SCTID:16958000","SCTID:64969001","MESH:D000848","Orphanet:2227","UMLS:C0020608"],"synonyms":[{"name":"familial tooth agenesis","type":"exact"},{"name":"hypodontia","type":"exact"},{"name":"oligodontia","type":"narrow"},{"name":"selective tooth agenesis","type":"exact"},{"name":"tooth agenesis, selective","type":"exact"}],"termid":"MONDO:0005486","xrefs":{"Monarch":{"xref_id":"0005486"}}}


id: GO:0050391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H2O + NADP+ = 3-methyl-2-oxobutanoate + NH3 + NADPH.","definition_xrefs":["MetaCyc:VALINE-DEHYDROGENASE-NADP+-RXN","EC:1.4.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"valine dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11156"],"synonyms":[{"name":"L-valine:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"valine dehydrogenase (NADP) activity","type":"exact"},{"name":"valine dehydrogenase (nicotinanide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0050391"}


id: MONDO:0022729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia","termid":"MONDO:0022723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata with steroid sulfatase deficiency","termid":"MONDO:0022729","xrefs":{"Monarch":{"xref_id":"0022729"}}}


id: RO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. ","direct_ancestors":[{"relation_name":"is_a","term_name":"has_synaptic_terminal_in","termid":"RO:0002130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}


id: GO:0019371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which prostaglandins are formed from arachidonic acid, and in which prostaglandin-endoperoxide synthase (cyclooxygenase) catalyzes the committed step in the conversion of arachidonic acid to the prostaglandin-endoperoxides PGG2 and PGH2.","definition_xrefs":["PMID:19854273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolic process","termid":"GO:0019369"},{"relation_name":"part_of","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclooxygenase pathway","termid":"GO:0019371"}


id: PBO:0069324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 582, pseudogene","termid":"PBO:0069324"}


id: MONDO:0013445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 9 deficiency","secondary_identifiers":["OMIM:613825","MEDGEN:462539","UMLS:C3151189","DOID:0060303","MESH:C565165","GARD:18292","NANDO:2200787"],"synonyms":[{"name":"C9 classic complement early component deficiency","type":"exact"},{"name":"C9 deficiency","type":"related"},{"name":"C9D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C9","type":"exact"},{"name":"complement component 9 deficiency","type":"exact"}],"termid":"MONDO:0013445","xrefs":{"Monarch":{"xref_id":"0013445"}}}


id: MONDO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous mastocytosis (obsolete MONDO:0002723)","synonyms":[{"name":"obsolete cutaneous mastocytosis (disease)","type":"exact"}],"termid":"MONDO:0002723","xrefs":{"Monarch":{"xref_id":"0002723"}}}


id: GO:0071439
data:
  {"annotated_genes":["SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78639],"is_not":false,"summary":null,"term":"GO:0071439"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of three clathrin heavy chains and three clathrin light chains, organized into a symmetrical three-legged structure called a triskelion. In clathrin-coated vesicles clathrin is the main component of the coat and forms a polymeric mechanical scaffold on the vesicle surface.","definition_xrefs":["GOC:mah","PMID:16493411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"clathrin complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"clathrin triskelion","type":"exact"}],"termid":"GO:0071439","terms_by_termid":{"GO:0071439":null}}


id: GO:0018947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic organosilicon metabolic process","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"anaerobic organosilicon metabolism","type":"exact"},{"name":"anaerobic organosilicone metabolic process","type":"exact"},{"name":"anaerobic organosilicone metabolism","type":"exact"}],"termid":"GO:0018947"}


id: PR:Q09772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00275","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rdh54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.03c","secondary_identifiers":["UniProtKB:Q09772"],"synonyms":[{"name":"ATP-dependent helicase rdh54 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD54 protein homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54B","type":"exact"},{"name":"meiotically up-regulated gene 34 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09772"}


id: PBO:0046173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELK1 pseudogene 1","termid":"PBO:0046173"}


id: PBO:0081338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 137, pseudogene","termid":"PBO:0081338"}


id: GO:0098716
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81721],"is_not":false,"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel cations from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transport","termid":"GO:0035444"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"nickel cation import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0090509"],"synonyms":[{"name":"nickel cation import into cell","type":"exact"}],"termid":"GO:0098716","terms_by_termid":{"GO:0098716":null}}


id: MONDO:0006598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis caused or precipitated by exposure to ultraviolet sunlight, or by mediating phototoxic or photoallergic material in response to ultraviolet sunlight.","definition_xrefs":["NCIT:C4816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irritant dermatitis","termid":"MONDO:0006564"},{"relation_name":"is_a","term_name":"photosensitivity disease","termid":"MONDO:0006597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phototoxic dermatitis","secondary_identifiers":["SCTID:53597009","MESH:D017484","Wikipedia:Photodermatitis","UMLS:C0162830","DOID:4407","EFO:1000753","MEDGEN:58188"],"synonyms":[{"name":"Photodermatitis","type":"exact"},{"name":"Photosensitisation reaction","type":"exact"},{"name":"photosensitive dermatitis","type":"exact"},{"name":"photosensitiveness","type":"exact"},{"name":"photosensitivity reaction","type":"exact"}],"termid":"MONDO:0006598","xrefs":{"Monarch":{"xref_id":"0006598"}}}


id: PBO:0108506
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0108506"}


id: PBO:0057331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520f","termid":"PBO:0057331"}


id: GO:0071800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a podosome, an actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"podosome assembly","termid":"GO:0071800"}


id: GO:1990892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which chromosome arm chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"mitotic chromosome arm condensation","termid":"GO:1990892"}


id: MONDO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated dystonia","termid":"MONDO:0015494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"generalized dystonia","secondary_identifiers":["DOID:0050835","SCTID:425492002","ICD9:333.89","MEDGEN:341342","Orphanet:376724","ICD9:333.6","ICD9:333.8","MESH:D004422","GARD:21618","UMLS:C1848954"],"synonyms":[{"name":"Idiopathic torsion dystonia","type":"related"},{"name":"Idiopathic torsion dystonias","type":"related"},{"name":"Oppenheim Ziehen disease","type":"related"},{"name":"Oppenheim-Ziehen disease","type":"related"},{"name":"Progressive torsion spasm","type":"related"},{"name":"childhood torsion disease","type":"related"},{"name":"dystonia 12","type":"related"},{"name":"dystonia deformans musculorum","type":"related"},{"name":"dystonia deformans progressiva","type":"exact"},{"name":"dystonia musculorum deformans","type":"related"},{"name":"dystonia, Idiopathic torsion","type":"related"},{"name":"dystonias, Idiopathic torsion","type":"related"},{"name":"dystonias, torsion","type":"related"},{"name":"familial dystonia","type":"related"},{"name":"fragments of torsion dystonia","type":"related"},{"name":"generalised isolated dystonia","type":"exact"},{"name":"generalized isolated dystonia","type":"exact"},{"name":"idiopathic familial dystonia","type":"related"},{"name":"idiopathic non-familial dystonia","type":"related"},{"name":"idiopathic torsion dystonia","type":"related"},{"name":"spasm, Progressive torsion","type":"related"},{"name":"symptomatic torsion dystonia","type":"related"},{"name":"torsion disease of childhood","type":"related"},{"name":"torsion disease, childhood","type":"related"},{"name":"torsion dystonia","type":"related"},{"name":"torsion dystonia, Idiopathic","type":"related"},{"name":"torsion spasm, Progressive","type":"related"}],"termid":"MONDO:0000476","xrefs":{"Monarch":{"xref_id":"0000476"}}}


id: PBO:0013839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"controlled curation, orthologous to S. cerevisiae YIL026C","termid":"PBO:0013839"}


id: MONDO:0020157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic palpebral coloboma (obsolete MONDO:0020157)","secondary_identifiers":["Orphanet:98566"],"termid":"MONDO:0020157","xrefs":{"Monarch":{"xref_id":"0020157"}}}


id: PATO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostrate","termid":"PATO:0000631"}


id: PBO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8 like","termid":"PBO:0060532"}


id: GO:0008371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. These are terms that have been removed from the active process ontology.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete biological process (obsolete GO:0008371)","termid":"GO:0008371"}


id: MONDO:0019793
data:
  {"annotated_genes":["SJAG_05332","SJAG_01356","SJAG_02885","SJAG_01438"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87031,87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[88130,88129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","definition":"Autosomal dominant cerebellar ataxia (ACDA) type III is a group of neurodegenerative disorders characterized by mostly pure cerebellar syndromes with occasional non-cerebellar signs (e.g. pyramidal signs, peripheral neuropathy, writer's cramp) and includes spinocerebellar ataxia (SCA) type 5 (SCA5), SCA6, SCA11, SCA26, SCA30, and SCA31.","definition_xrefs":["Orphanet:94148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_01438":null,"SJAG_02885":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia type III","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842779","UMLS:C5680260","GARD:19253"],"synonyms":[{"name":"ADCA3","type":"exact"},{"name":"ADCAIII","type":"exact"},{"name":"Pure cerebellar syndrome-mild pyramidal signs syndrome","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type 3","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type III","type":"exact"}],"termid":"MONDO:0019793","terms_by_termid":{"MONDO:0012246":null,"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0019793"}}}


id: PR:Q10213
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase srs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.05","synonyms":[{"name":"Spom972h-srs2","type":"exact"}],"termid":"PR:Q10213"}


id: FYPO:0003571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin at the silenced mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:18761674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at silent mating locus during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0003571"}


id: PBO:0050255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 33","termid":"PBO:0050255"}


id: PBO:0090916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone","termid":"PBO:0090916"}


id: FYPO:0008165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic M phase","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}


id: PBO:0067833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 135","termid":"PBO:0067833"}


id: PBO:0028252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay_following_nitrogen_starvation-induced_G1_phase_arrest","termid":"PBO:0028252"}


id: GO:0045512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-26.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-26 binding","synonyms":[{"name":"IL-26 binding","type":"exact"}],"termid":"GO:0045512"}


id: MONDO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Pseudomonas aeruginosa CF5 infection is a Pseudomonas infection of strain CF5.","definition_xrefs":["EFO:0001077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudomonas aeruginosa CF5 infection","termid":"MONDO:0005142","xrefs":{"Monarch":{"xref_id":"0005142"}}}


id: PBO:0062037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 6","termid":"PBO:0062037"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: PBO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/DEAH box helicase","termid":"PBO:0000174"}


id: PBO:0054366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1760","termid":"PBO:0054366"}


id: PBO:0111524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 4","termid":"PBO:0111524"}


id: PBO:0082181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC kinase; phosphorylated by cAMP-dependent protein kinase (PKA) in a TORC1-dependent manner; directly phosphorylated by TORC1; phosphorylates ribosomal protein Rps6a/b (S6), in a TORC-dependent manner; undergoes autophosphorylation","termid":"PBO:0082181"}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: PBO:0071537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 2","termid":"PBO:0071537"}


id: PBO:0088586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytosine-mismatch binding protein 1, candidate TFAM ortholog","termid":"PBO:0088586"}


id: PBO:0039871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 29","termid":"PBO:0039871"}


id: GO:2000154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of flagellar cell motility.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of flagellar cell motility (obsolete GO:2000154)","synonyms":[{"name":"negative regulation of flagellar cell motility","type":"exact"}],"termid":"GO:2000154"}


id: GO:0031417
data:
  {"annotated_genes":["SJAG_04131","SJAG_03215","SJAG_06449"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68421,74143,77016],"is_not":false,"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule that has a Met-Ile, Met-Leu, Met-Trp, or Met-Phe N-terminus. In Saccharomyces the complex includes Mak3p, Mak10p, and Mak31p.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03215":null,"SJAG_04131":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"NatC complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"N-terminal acetyltransferase C complex","type":"exact"}],"termid":"GO:0031417","terms_by_termid":{"GO:0031417":null}}


id: FYPO:0002007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes form a single, irregularly-shaped mass in the nucleus.","definition_xrefs":["PMID:19074598","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal chromosome morphology, single irregular mass","synonyms":[{"name":"abnormal chromatin organization with single irregular mass of chromatin","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during vegetative growth","type":"exact"}],"termid":"FYPO:0002007"}


id: GO:1905146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular protein catabolic process that takes place in a lysosome.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:24334770","GOC:bf","GO_REF:0000062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"lysosomal protein catabolic process","synonyms":[{"name":"cellular protein breakdown in lysosome","type":"exact"},{"name":"cellular protein catabolic process in lysosome","type":"exact"},{"name":"cellular protein catabolism in lysosome","type":"exact"},{"name":"cellular protein degradation in lysosome","type":"exact"},{"name":"lysosomal protein catabolism","type":"exact"},{"name":"lysosomal protein degradation","type":"exact"},{"name":"lysosomal proteolysis","type":"related"},{"name":"proteolysis within lysosome","type":"related"}],"termid":"GO:1905146"}


id: PR:O13928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom972h-rho3","type":"exact"}],"termid":"PR:O13928"}


id: MONDO:0007569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema nodosum, familial","secondary_identifiers":["MESH:C535510","MEDGEN:377045","OMIM:132990","UMLS:C1851503"],"synonyms":[{"name":"erythema nodosum, familial","type":"exact"},{"name":"familial erythema nodosum","type":"related"}],"termid":"MONDO:0007569","xrefs":{"Monarch":{"xref_id":"0007569"}}}


id: PBO:0086327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to P-type ATPase sodium pumps; member of the Na+ efflux ATPase family","termid":"PBO:0086327"}


id: GO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of the renal capsule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"renal capsule formation","termid":"GO:0072129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule specification","termid":"GO:0072130"}


id: PBO:0078780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 5-1","termid":"PBO:0078780"}


id: GO:0048778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of erythrophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"erythrophore differentiation","termid":"GO:0048773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrophore differentiation","termid":"GO:0048778"}


id: PR:Q10352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.10c gene.","definition_xrefs":["UniProtKB:Q10352","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.10c","synonyms":[{"name":"Spom972h-SPAC1F12.10c","type":"exact"}],"termid":"PR:Q10352"}


id: MONDO:0800307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de la Chapelle dysplasia","secondary_identifiers":["icd11.foundation:248590292","MEDGEN:342529","UMLS:C1850555"],"synonyms":[{"name":"DLCD","type":"exact"}],"termid":"MONDO:0800307","xrefs":{"Monarch":{"xref_id":"0800307"}}}


id: PBO:0084348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of carbamoyl phosphate synthetase; carbamoyl phosphate synthetase catalyzes a step in the synthesis of citrulline, an arginine precursor","termid":"PBO:0084348"}


id: PBO:0113086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates protein sorting and deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes; required for ESCRT-dependent transport of ubiquitinated cargo to the vacuole; localizes to extracellular vesicles during heat conditioning with proposed function in thermotolerance; orthologous to mammalian ESCRT-associated protein ALIX (PDCD6IP)","termid":"PBO:0113086"}


id: FYPO:0000527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of pexophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of peroxisome degradation","synonyms":[{"name":"decreased rate of pexophagy","type":"exact"},{"name":"pexophagy: decreased rate","type":"related"},{"name":"reduced rate of peroxisome degradation","type":"exact"}],"termid":"FYPO:0000527"}


id: PBO:0045025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 3","termid":"PBO:0045025"}


id: PBO:0085431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; during oxidative stress exports spermine, spermidine from the cell, which controls timing of expression of stress-responsive genes; phosphorylation enhances activity and sorting to the plasma membrane","termid":"PBO:0085431"}


id: PBO:0056021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 2","termid":"PBO:0056021"}


id: GO:0033327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis.","definition_xrefs":["PMID:12050120","GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Leydig cell differentiation","termid":"GO:0033327"}


id: PBO:0080011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 13","termid":"PBO:0080011"}


id: GO:0033277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle in which mitosis is begun and progresses normally through the end of anaphase, but not completed, resulting in a cell with increased ploidy.","definition_xrefs":["PMID:9573008","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abortive mitotic cell cycle (obsolete GO:0033277)","synonyms":[{"name":"abortive mitosis","type":"related"}],"termid":"GO:0033277"}


id: PBO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.49","termid":"PBO:0003201"}


id: PBO:0063208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 4","termid":"PBO:0063208"}


id: FYPO:0005012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H4-K5 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4-K5 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K5 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K5 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005012"}


id: PBO:0031379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_kinetochore_morphology","termid":"PBO:0031379"}


