# terms

id: PBO:0062586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 1","termid":"PBO:0062586"}


id: PBO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter Fnx1","termid":"PBO:0004061"}


id: GO:0106334
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120989],"is_not":false,"summary":null,"term":"GO:0106334"}]},"cv_name":"molecular_function","definition":"Catalysis of the conversion of a 3'-deoxyribose phosphate in DNA to a 3'-phosphate.","definition_xrefs":["GOC:mah","RHEA:65764","PMID:21276450","PMID:22375014","PMID:22084197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"3'-deoxyribose phosphate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-dRP lyase","type":"related"},{"name":"3'-dRP lyase activity","type":"related"}],"termid":"GO:0106334","terms_by_termid":{"GO:0106334":null}}


id: PBO:0088849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap113","termid":"PBO:0088849"}


id: GO:2001049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tendon cell differentiation","synonyms":[{"name":"regulation of muscle attachment cell differentiation","type":"exact"},{"name":"regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001049"}


id: MONDO:0007703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heart, malformation of (obsolete MONDO:0007703)","termid":"MONDO:0007703","xrefs":{"Monarch":{"xref_id":"0007703"}}}


id: PBO:0051015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 2","termid":"PBO:0051015"}


id: PBO:0039923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 25","termid":"PBO:0039923"}


id: FYPO:0000902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule depolymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule catastrophe during vegetative growth","type":"related"},{"name":"abnormal microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule shrinkage during vegetative growth","type":"related"}],"termid":"FYPO:0000902"}


id: PBO:0072345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 31","termid":"PBO:0072345"}


id: FYPO:0001554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA processing is abnormal. tRNA processing is the conversion a primary tRNA transcript into a mature tRNA molecules.","definition_xrefs":["GO:0008033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"abnormal tRNA processing","synonyms":[{"name":"abnormal tRNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001554"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: GO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = alpha-D-galactosyl-(1,4)-beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["EC:2.4.1.228","MetaCyc:2.4.1.228-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"lactosylceramide 4-alpha-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9846477","RHEA:11924"],"synonyms":[{"name":"Gal-beta-(1,4)-Glc-beta-1-Cer alpha-(1,4)-galactosyltransferase activity","type":"related"},{"name":"Gal-beta-1,4-Glc-beta-1-Cer alpha-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:lactosylceramide 4II-alpha-D-galactosyltransferase activity","type":"related"},{"name":"globotriaosylceramide/CD77 synthase activity","type":"narrow"},{"name":"histo-blood group P(k) UDP-galactose activity","type":"narrow"},{"name":"histo-blood group Pk UDP-galactose","type":"related"},{"name":"lactosylceramide 4-a-galactosyltransferase activity","type":"exact"}],"termid":"GO:0050512"}


id: PBO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 2","termid":"PBO:0070864"}


id: PBO:0064422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase","termid":"PBO:0064422"}


id: GO:0097709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared.","definition_xrefs":["GOC:bc","PMID:25590961","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue replacement","termid":"GO:0097709"}


id: MONDO:0008976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin-6-sulfaturia, defective cellular immunity, nephrotic syndrome","secondary_identifiers":["MEDGEN:349095","MESH:C565852","UMLS:C1859104","OMIM:215250"],"synonyms":[{"name":"chondroitin-6-Sulfaturia, defective cellular immunity, nephrotic syndrome","type":"exact"}],"termid":"MONDO:0008976","xrefs":{"Monarch":{"xref_id":"0008976"}}}


id: PBO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 4","termid":"PBO:0045191"}


id: MONDO:0011201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 2","secondary_identifiers":["MESH:C536546","MEDGEN:356087","UMLS:C1865810","OMIM:602134","DOID:0111429"],"synonyms":[{"name":"ETM2","type":"exact"},{"name":"essential tremor, hereditary, 2","type":"exact"},{"name":"tremor hereditary essential, 2","type":"related"},{"name":"tremor, hereditary essential, 2","type":"exact"}],"termid":"MONDO:0011201","xrefs":{"Monarch":{"xref_id":"0011201"}}}


id: MONDO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade squamous cell carcinoma that arises from the conjunctiva. It is the most common primary malignant tumor that arises from the conjunctiva. It usually affects older white males. Excessive exposure to sunlight is a risk factor. Patients may present with a mass, red eye, or pain.","definition_xrefs":["NCIT:C4549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"conjunctival cancer","termid":"MONDO:0003454"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"conjunctival squamous cell carcinoma","secondary_identifiers":["DOID:1748","MEDGEN:87558","SCTID:255003007","EFO:1000206","UMLS:C0346359"],"synonyms":[{"name":"conjunctiva epidermoid carcinoma","type":"exact"},{"name":"conjunctiva squamous cell carcinoma","type":"exact"},{"name":"conjunctival epidermoid carcinoma","type":"exact"},{"name":"conjunctival squamous cell cancer","type":"exact"},{"name":"conjunctival squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of conjunctiva","type":"exact"},{"name":"epidermoid carcinoma of the conjunctiva","type":"exact"},{"name":"invasive squamous cell carcinoma of the conjunctiva","type":"exact"},{"name":"ocular surface squamous neoplasia","type":"broad"},{"name":"squamous cell carcinoma of conjunctiva","type":"exact"},{"name":"squamous cell carcinoma of the conjunctiva","type":"exact"}],"termid":"MONDO:0006173","xrefs":{"Monarch":{"xref_id":"0006173"}}}


id: GO:1903666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asexual reproduction","synonyms":[{"name":"activation of asexual reproduction","type":"narrow"},{"name":"up regulation of asexual reproduction","type":"exact"},{"name":"up-regulation of asexual reproduction","type":"exact"},{"name":"upregulation of asexual reproduction","type":"exact"}],"termid":"GO:1903666"}


id: PBO:0080696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 3","termid":"PBO:0080696"}


id: PBO:0043200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemokine like factor","termid":"PBO:0043200"}


id: FYPO:0004768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular arginine level","termid":"FYPO:0005263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar arginine level","synonyms":[{"name":"increased level of arginine in vacuole","type":"exact"},{"name":"increased vacuolar L-arginine level","type":"exact"},{"name":"increased vacuolar arginine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar arginine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004768"}


id: MONDO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal atrial tachycardia is a rare supraventricular arrhythmia in neonates and young infants that is characterized by multiple P waves with varying P wave morphology and is usually asymptomatic.","definition_xrefs":["Orphanet:3282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"multifocal atrial tachycardia","secondary_identifiers":["ICD9:427.89","GARD:1235","HP:0011701","SCTID:49982000","icd11.foundation:262929566","UMLS:C0221158","MEDGEN:66362"],"synonyms":[{"name":"MAT","type":"exact"},{"name":"chaotic atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia (disease)","type":"exact"}],"termid":"MONDO:0017988","xrefs":{"Monarch":{"xref_id":"0017988"}}}


id: PBO:0055200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2625","termid":"PBO:0055200"}


id: PBO:0073866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 2","termid":"PBO:0073866"}


id: MONDO:0014494
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89200],"is_not":false,"summary":null,"term":"MONDO:0014494"}]},"cv_name":"mondo","definition":"Any generalized pustular psoriasis in which the cause of the disease is a mutation in the AP1S3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"is_obsolete":false,"name":"psoriasis 15, pustular, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111281","MEDGEN:863672","OMIM:616106","UMLS:C4015235"],"synonyms":[{"name":"AP1S3 generalised pustular psoriasis","type":"exact"},{"name":"AP1S3 generalized pustular psoriasis","type":"exact"},{"name":"PSORS15","type":"related"},{"name":"generalised pustular psoriasis caused by mutation in AP1S3","type":"exact"},{"name":"generalized pustular psoriasis caused by mutation in AP1S3","type":"exact"},{"name":"psoriasis 15, pustular, susceptibility to","type":"exact"},{"name":"susceptibility to pustular psoriasis 15","type":"related"}],"termid":"MONDO:0014494","terms_by_termid":{"MONDO:0014494":null},"xrefs":{"Monarch":{"xref_id":"0014494"}}}


id: PBO:0048943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 1","termid":"PBO:0048943"}


id: FYPO:0001869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which adenylyl cyclase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal adenylyl cyclase activity","termid":"FYPO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished adenylyl cyclase activity","synonyms":[{"name":"abolished adenylate cyclase activity","type":"exact"},{"name":"adenylyl cyclase activity abolished","type":"exact"}],"termid":"FYPO:0001869"}


id: MONDO:0017586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Onychocytic matricoma is a rare tumor of the nail that is generally benign. Affected people often experience thickening of the involved portion of the nail. The tumor may be pigmented (melanonychia - a black or brown pigmentation of the normal nail plate) or non-pigmented. The exact underlying cause of onychocytic matricoma is currently unknown. It generally occurs sporadically in people with no family history of the condition. Treatment generally consists of surgical excision.","direct_ancestors":[{"relation_name":"is_a","term_name":"nail tumor","termid":"MONDO:0017588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onychocytic matricoma","secondary_identifiers":["GARD:11007","MEDGEN:1662490","UMLS:C4751108","Orphanet:300504"],"synonyms":[{"name":"acanthoma of the nail matrix","type":"exact"}],"termid":"MONDO:0017586","xrefs":{"Monarch":{"xref_id":"0017586"}}}


id: PBO:0066908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 209","termid":"PBO:0066908"}


id: GO:0097395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-32 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-32","synonyms":[{"name":"response to IL-32","type":"exact"}],"termid":"GO:0097395"}


id: PBO:0027128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_late_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027128"}


id: GO:0052759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex + H- = trinitrophenol dihydride Meisenheimer complex (aci form). Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["UM-BBD_reactionID:r1066","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4,6-trinitrophenol hydride reductase activity (obsolete GO:0052759)","synonyms":[{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol-hydride-Meisenheimer-complex hydride transferase activity","type":"exact"}],"termid":"GO:0052759"}


id: PBO:0029791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029791"}


id: PBO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Aspartic acid, mitochondrial","termid":"PBO:0005888"}


id: PBO:0066415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renin","termid":"PBO:0066415"}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: PATO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A response quality inhering in a bearer by virtue of the bearer's excessive reaction to a stimulus or an agent.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"responsive to","termid":"PATO:0000487"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperresponsive to","synonyms":[{"name":"hyperresponsive","type":"exact"},{"name":"increased responsivity","type":"exact"}],"termid":"PATO:0001192"}


id: MONDO:0100410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(16;21)(p11;q22). (A chromosomal translocation involving the FUS gene on chromosome 16p11 and the ERG gene on chromosome 21q22.)","definition_xrefs":["NCIT:C36616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(16;21)(p11;q22)","synonyms":[{"name":"AML, t(16;21)(p11.2;q22.2)","type":"exact"},{"name":"AML, t(16;21)(p11;q22)","type":"exact"}],"termid":"MONDO:0100410","xrefs":{"Monarch":{"xref_id":"0100410"}}}


id: MONDO:0012157
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87874],"is_not":false,"summary":null,"term":"MONDO:0012157"}]},"cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset muscle weakness, and low amplitude of the miniature endplate potential and current that has material basis in homozygous or compound heterozygous mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["DOID:0110679","PMID:25792100","PMID:8957026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:373251","UMLS:C1837091","GARD:10108","OMIM:608931"],"synonyms":[{"name":"CMS Id","type":"exact"},{"name":"CMS1D","type":"exact"},{"name":"CMS4C","type":"exact"},{"name":"Cms Id","type":"related"},{"name":"Cms Id, formerly","type":"related"},{"name":"FIM1","type":"exact"},{"name":"congenital myasthenic syndrome 4C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome associated with acetylcholine receptor deficiency","type":"related"},{"name":"congenital myasthenic syndrome type 4C","type":"exact"},{"name":"congenital myasthenic syndrome type Id","type":"exact"},{"name":"familial infantile myasthenia 1","type":"exact"},{"name":"myasthenia, familial infantile, 1","type":"related"},{"name":"myasthenia, familial infantile, 1, formerly","type":"related"},{"name":"myasthenic syndrome, congenital, 4C, associated with acetylcholine receptor deficiency","type":"related"},{"name":"myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency","type":"related"},{"name":"myasthenic syndrome, congenital, type Id","type":"related"}],"termid":"MONDO:0012157","terms_by_termid":{"MONDO:0012157":null},"xrefs":{"Monarch":{"xref_id":"0012157"}}}


id: MONDO:0006559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic suppurative and cicatricial disease of the apocrine glands occurring chiefly in the axillae in women and in the groin and anal regions in men. It is characterized by poral occlusion with secondary bacterial infection, evolving into abscesses which eventually rupture. As the disease becomes chronic, ulcers appear, sinus tracts enlarge, fistulas develop, and fibrosis and scarring become evident.","definition_xrefs":["MESH:D017497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenitis","termid":"MONDO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenitis suppurativa","secondary_identifiers":["MEDGEN:57993","Wikipedia:Hidradenitis_suppurativa","SCTID:59393003","ICD10CM:L73.2","EFO:1000710","DOID:2280","icd11.foundation:1621794154","UMLS:C0162836","Orphanet:387"],"synonyms":[{"name":"acne inversa","type":"exact"},{"name":"acne inversa, familial","type":"narrow"},{"name":"ectopic acne","type":"exact"},{"name":"fox den disease","type":"exact"},{"name":"hidradenitis suppurativa","type":"exact"},{"name":"pyoderma fistulans significa","type":"exact"},{"name":"verneuil disease","type":"exact"}],"termid":"MONDO:0006559","xrefs":{"Monarch":{"xref_id":"0006559"}}}


id: PATO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000558 size value (obsolete PATO:0000558)","termid":"PATO:0000558"}


id: PBO:0089575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A inhibitor Sds23/Moc1","termid":"PBO:0089575"}


id: GO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor activating ligand activity (obsolete GO:0005155)","synonyms":[{"name":"EGF receptor activating ligand activity","type":"exact"},{"name":"EGFR activating ligand activity","type":"exact"},{"name":"epidermal growth factor receptor activating ligand activity","type":"exact"}],"termid":"GO:0005155"}


id: GO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the female germ cell, a reproductive cell in females.","definition_xrefs":["GOC:hjd","CL:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"female germ cell nucleus","secondary_identifiers":["GO:0043080"],"synonyms":[{"name":"female germ-cell nucleus","type":"exact"}],"termid":"GO:0001674"}


id: MONDO:0019527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder which does not meet classification criteria used to establish the presence of other well-defined connective tissue diseases.","definition_xrefs":["NCIT:C116776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"undifferentiated connective tissue syndrome","secondary_identifiers":["Orphanet:90002","MedDRA:10071575","MEDGEN:592754","SCTID:239918008","UMLS:C0409999","GARD:19097"],"synonyms":[{"name":"UCTD","type":"exact"},{"name":"undifferentiated connective tissue disease","type":"exact"}],"termid":"MONDO:0019527","xrefs":{"Monarch":{"xref_id":"0019527"}}}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: MONDO:0027750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete serpinopathy with toxic serpin polymerization (obsolete MONDO:0027750)","secondary_identifiers":["Orphanet:250808"],"termid":"MONDO:0027750","xrefs":{"Monarch":{"xref_id":"0027750"}}}


id: PBO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_prospore_membrane_formation","termid":"PBO:0036219"}


id: PBO:0069440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 705, pseudogene","termid":"PBO:0069440"}


id: GO:0032908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transforming growth factor beta1 production","synonyms":[{"name":"regulation of TGF-B1 production","type":"exact"},{"name":"regulation of TGFB1 production","type":"exact"},{"name":"regulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032908"}


id: MONDO:0016968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of chromosome 18","termid":"MONDO:0016936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 18","secondary_identifiers":["Orphanet:262977","MESH:C538308","GARD:20888","MEDGEN:167200","UMLS:C0809935"],"synonyms":[{"name":"18q duplication","type":"related"},{"name":"18q partial trisomy","type":"related"},{"name":"18q trisomy","type":"related"},{"name":"Duplication 18q","type":"related"},{"name":"chromosome 18q duplication","type":"related"},{"name":"partial duplication of chromosome 18q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 18","type":"exact"},{"name":"partial trisomy of chromosome 18q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 18","type":"exact"},{"name":"trisomy 18q","type":"related"}],"termid":"MONDO:0016968","xrefs":{"Monarch":{"xref_id":"0016968"}}}


id: PR:Q09823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.04c","synonyms":[{"name":"Spom972h-rec10","type":"exact"}],"termid":"PR:Q09823"}


id: GO:0120276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebral blood circulation","synonyms":[{"name":"regulation of cerebrum blood circulation","type":"exact"},{"name":"regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120276"}


id: GO:1902051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(4)-dafachronate.","definition_xrefs":["PMID:16529801","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate binding","termid":"GO:1902051"}


id: GO:0140849
data:
  {"annotated_genes":["SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89851],"is_not":false,"summary":null,"term":"GO:0140849"}]},"cv_name":"molecular_function","definition":"A histone chaperone that mediates the exchange of histone H2A-H2B dimer and histone H2AZ-H2B dimers in a nucleosome, driven by ATP hydrolysis. Some chaperones insert H2AZ-H2B dimers and remove H2A-H2B, while others do the opposite.","definition_xrefs":["PMID:21241891","PMID:23580526","PMID:30309918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent histone chaperone activity","termid":"GO:0140674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140597","GO:0140096","GO:0003674","GO:0003824","GO:0140104","GO:0140097"],"is_obsolete":false,"name":"ATP-dependent H2AZ histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent H2A.Z histone chaperone activity","type":"exact"},{"name":"H2AZ histone exchange activity","type":"related"}],"termid":"GO:0140849","terms_by_termid":{"GO:0140849":null}}


id: PBO:0077249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 2","termid":"PBO:0077249"}


id: PBO:0079611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 H pseudogene 1","termid":"PBO:0079611"}


id: GO:0005773
data:
  {"annotated_genes":["SJAG_00516","SJAG_02565","SJAG_00587","SJAG_00115","SJAG_03355","SJAG_03962","SJAG_01274","SJAG_01978","SJAG_01407","SJAG_00004","SJAG_01991","SJAG_00402","SJAG_02023","SJAG_03406","SJAG_02782","SJAG_03316","SJAG_01941","SJAG_04910","SJAG_01598","SJAG_02330","SJAG_00732","SJAG_04785","SJAG_01080","SJAG_04790","SJAG_01344","SJAG_04312","SJAG_02440","SJAG_02100","SJAG_01913","SJAG_04502","SJAG_03250","SJAG_00570","SJAG_07012","SJAG_03608","SJAG_03089","SJAG_04506","SJAG_04717","SJAG_00771","SJAG_01236","SJAG_03909","SJAG_03405","SJAG_05194","SJAG_01772","SJAG_03652","SJAG_01493","SJAG_03137","SJAG_01783","SJAG_03511","SJAG_01319","SJAG_00051","SJAG_01612","SJAG_03005","SJAG_02902","SJAG_02716","SJAG_01033","SJAG_01983","SJAG_03256","SJAG_02495","SJAG_02414","SJAG_03976","SJAG_04725","SJAG_03138","SJAG_00209","SJAG_02231","SJAG_01795","SJAG_02581","SJAG_02432","SJAG_01324","SJAG_03951","SJAG_01183","SJAG_01219","SJAG_01072","SJAG_01145","SJAG_00204","SJAG_02029","SJAG_03899","SJAG_02603","SJAG_02723","SJAG_04028","SJAG_02765","SJAG_02578","SJAG_05213","SJAG_04867","SJAG_02344","SJAG_01447","SJAG_04496","SJAG_06309","SJAG_01507","SJAG_02957","SJAG_04975","SJAG_01509","SJAG_03987","SJAG_00620","SJAG_01112","SJAG_02356","SJAG_00688","SJAG_01032","SJAG_01400","SJAG_03363","SJAG_00457","SJAG_03385","SJAG_02076","SJAG_01135","SJAG_03848","SJAG_03072","SJAG_02656","SJAG_00132","SJAG_02103","SJAG_04232","SJAG_02433","SJAG_03928","SJAG_04471","SJAG_05245","SJAG_03447","SJAG_01320","SJAG_00821","SJAG_03508","SJAG_02114","SJAG_03371","SJAG_02943","SJAG_03895","SJAG_04819","SJAG_02694","SJAG_01471","SJAG_03725","SJAG_01803","SJAG_04637","SJAG_02060","SJAG_01299","SJAG_01990","SJAG_03360","SJAG_03450","SJAG_03401","SJAG_00136","SJAG_00181","SJAG_02853","SJAG_04698","SJAG_02962","SJAG_03009","SJAG_04167","SJAG_01527","SJAG_02699","SJAG_03667","SJAG_01619","SJAG_04966","SJAG_01184","SJAG_02196","SJAG_04426","SJAG_01868","SJAG_03656","SJAG_03022","SJAG_00029","SJAG_04643","SJAG_03403","SJAG_01373","SJAG_01382","SJAG_03100","SJAG_00534","SJAG_03442","SJAG_04221","SJAG_03785","SJAG_04955","SJAG_01095","SJAG_00561","SJAG_03606","SJAG_00018","SJAG_00877","SJAG_01505","SJAG_02132","SJAG_03960","SJAG_04015","SJAG_03586","SJAG_05342","SJAG_03386","SJAG_00299","SJAG_00589","SJAG_04963","SJAG_00212","SJAG_02117","SJAG_03400","SJAG_00824","SJAG_01036","SJAG_05210","SJAG_00380","SJAG_01397","SJAG_01571","SJAG_01817","SJAG_03315","SJAG_05184","SJAG_00638","SJAG_04616","SJAG_01027","SJAG_04023","SJAG_02665","SJAG_05294","SJAG_02289","SJAG_01088","SJAG_02424","SJAG_04714","SJAG_01078","SJAG_04655","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60531,66354,71444,98471,117222],"is_not":false,"summary":null,"term":"GO:0005773"},{"annotations":[81401,96523,78681,106783,74458,81482,101623,74330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005776"},{"annotations":[72278,73844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000421"},{"annotations":[78459,72647,72333,77040,80215,106345,109511,114348,98414,118850,119983,77629,75523,109599,71987,89804,92014,100453,90004,114869,103458,98883,82167,73720,75675,74604,90312,62363,92015,103789,76777,105711,105945,110804,111327,96727,111425,81733,111442,114736,96990,116185,74191,100458,80354,111790,62552,77953,99525,72326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000324"},{"annotations":[99766,116463,117872,115314,107719,89334,95810,72597,99556,103607,116189,70298],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[110259,95923,97675,109120,99545,74402,111279,72150,74292,97560,100619,107677,81656,73927,74806,95660,116353,101499,119409,71872,82068,80389,81842,103912,76750,108645,71034,91026,96497,113787,90943,78215,97936,75158,89900,95420,109164,80921,75846,76255,96528,99965,95787,98050,101909,102164,105741,111365,72277,116895,73686,72650,95661,101876,119049,93388,118644,80249,77079,91012,94786,94870,95602,98331,109822,111860,89882,74626,74508,97810,112249,93944,103572,118216,119635,90964,104957,110664,100788,119283,119838,108652,107094,95947,115567,74587,115243,118572,105856,120239,76624,112387,78287,81903,81503,72453,81554,89596,97894,99274,100748,105534,109371,98012,106937,115427,92273,100474,106866,116360,119576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"},{"annotations":[111980,115569,89597,81905],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070772"},{"annotations":[107096,95948,109823,94787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071986"},{"annotations":[81595,72919,78966,106597,96210,72993,76886,81858],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902500"},{"annotations":[108620,121152,80216,77164,90180,112955,75176,114870,68799,75310,72648,111795,91297],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005774"},{"annotations":[62670,97742,101877,105857,97561,93945,92039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[120775,98535,72974,111862,100840,89901,61019,104616],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol.","definition_xrefs":["ISBN:0198506732","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":202,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00018":null,"SJAG_00029":null,"SJAG_00051":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00136":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00380":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00561":null,"SJAG_00570":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00620":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01033":null,"SJAG_01036":null,"SJAG_01072":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01095":null,"SJAG_01112":null,"SJAG_01135":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01184":null,"SJAG_01219":null,"SJAG_01236":null,"SJAG_01274":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01373":null,"SJAG_01382":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01407":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01505":null,"SJAG_01507":null,"SJAG_01509":null,"SJAG_01527":null,"SJAG_01571":null,"SJAG_01598":null,"SJAG_01612":null,"SJAG_01619":null,"SJAG_01772":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01868":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02060":null,"SJAG_02076":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02114":null,"SJAG_02117":null,"SJAG_02132":null,"SJAG_02196":null,"SJAG_02231":null,"SJAG_02289":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02424":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02440":null,"SJAG_02495":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02581":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02694":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_02962":null,"SJAG_03005":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03315":null,"SJAG_03316":null,"SJAG_03355":null,"SJAG_03360":null,"SJAG_03363":null,"SJAG_03371":null,"SJAG_03385":null,"SJAG_03386":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03403":null,"SJAG_03405":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03508":null,"SJAG_03511":null,"SJAG_03586":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03652":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03785":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_03962":null,"SJAG_03976":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04221":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04426":null,"SJAG_04471":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04637":null,"SJAG_04643":null,"SJAG_04655":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04717":null,"SJAG_04725":null,"SJAG_04785":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_04867":null,"SJAG_04910":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05213":null,"SJAG_05245":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_06309":null,"SJAG_07012":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"vacuole","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:40195311":null},"secondary_identifiers":["Wikipedia:Vacuole"],"synonyms":[{"name":"vacuolar carboxypeptidase Y","type":"related"}],"termid":"GO:0005773","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000324":null,"GO:0000328":null,"GO:0000329":null,"GO:0000421":null,"GO:0005773":null,"GO:0005774":null,"GO:0005776":null,"GO:0070772":null,"GO:0071986":null,"GO:1902500":null}}


id: GO:0050635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylanthranilyl-CoA + 3 H+ + 3 malonyl-CoA = 1,3-dihydroxy-N-methylacridone + 3 CO2 + 4 CoA + H2O.","definition_xrefs":["EC:2.3.1.159","RHEA:22224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"acridone synthase activity","secondary_identifiers":["MetaCyc:2.3.1.159-RXN","KEGG_REACTION:R07250"],"synonyms":[{"name":"malonyl-CoA:N-methylanthraniloyl-CoA malonyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050635"}


id: MONDO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinosarcoma (obsolete MONDO:0002161)","termid":"MONDO:0002161","xrefs":{"Monarch":{"xref_id":"0002161"}}}


id: GO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligoglycosylglucosylceramide = ceramide + oligoglycosylglucose.","definition_xrefs":["EC:3.2.1.123","MetaCyc:ENDOGLYCOSYLCERAMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"endoglycosylceramidase activity","secondary_identifiers":["RHEA:22288"],"synonyms":[{"name":"EGCase activity","type":"related"},{"name":"endo-glucosylceramidase activity","type":"related"},{"name":"endoglycoceramidase activity","type":"related"},{"name":"glycosyl-N-acetyl-sphingosine 1,1-beta-D-glucanohydrolase activity","type":"related"},{"name":"oligoglycosylglucosylceramide glycohydrolase activity","type":"related"}],"termid":"GO:0047876"}


id: PBO:0114647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex DNAJ domain subunit Sec63","termid":"PBO:0114647"}


id: PBO:0119958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c oxidase Cox2 assembly protein, Cox16","termid":"PBO:0119958"}


id: PBO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 2","termid":"PBO:0060915"}


id: PBO:0061575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 gamma (pseudogene)","termid":"PBO:0061575"}


id: GO:0031162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfur incorporation into metallo-sulfur cluster (obsolete GO:0031162)","synonyms":[{"name":"sulphur incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0031162"}


id: GO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein dephosphorylation (obsolete GO:0039596)","termid":"GO:0039596"}


id: PBO:0074195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 5","termid":"PBO:0074195"}


id: PBO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2)","termid":"PBO:0047915"}


id: PBO:0091504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam5","termid":"PBO:0091504"}


id: PBO:0054985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2399","termid":"PBO:0054985"}


id: GO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:19520858","PMID:14607247"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-associated misfolded protein catabolic process (obsolete GO:0071712)","synonyms":[{"name":"endoplasmic reticulum-associated misfolded protein catabolism","type":"exact"}],"termid":"GO:0071712"}


id: PBO:0069574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 847, pseudogene","termid":"PBO:0069574"}


id: MONDO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 5","secondary_identifiers":["MEDGEN:393664","OMIM:612230","UMLS:C2677122"],"synonyms":[{"name":"CRCS5","type":"exact"},{"name":"colorectal cancer, susceptibility to, 5","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 10","type":"related"}],"termid":"MONDO:0012821","xrefs":{"Monarch":{"xref_id":"0012821"}}}


id: GO:0071727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triacylated bacterial lipopeptide stimulus.","definition_xrefs":["PMID:2757794","GOC:add","PMID:12077222","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"},{"relation_name":"is_a","term_name":"response to triacyl bacterial lipopeptide","termid":"GO:0071725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triacyl bacterial lipopeptide","synonyms":[{"name":"cellular response to triacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071727"}


id: GO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-retinal = 11-cis-retinal.","definition_xrefs":["PMID:21447403"],"gene_count":0,"genotype_count":0,"name":"obsolete retinal isomerase activity (obsolete GO:0004744)","synonyms":[{"name":"all-trans-retinal 11-cis-trans-isomerase activity","type":"related"},{"name":"retinene isomerase activity","type":"related"},{"name":"retinoid isomerase activity","type":"broad"}],"termid":"GO:0004744"}


id: GO:0051194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cofactor metabolic process (obsolete GO:0051194)","synonyms":[{"name":"activation of cofactor metabolic process","type":"narrow"},{"name":"positive regulation of cofactor metabolism","type":"exact"},{"name":"stimulation of cofactor metabolic process","type":"narrow"},{"name":"up regulation of cofactor metabolic process","type":"exact"},{"name":"up-regulation of cofactor metabolic process","type":"exact"},{"name":"upregulation of cofactor metabolic process","type":"exact"}],"termid":"GO:0051194"}


id: PBO:0089363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase activity, implicated in cellular detoxification","termid":"PBO:0089363"}


id: PBO:0049869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HELZ antisense RNA 1","termid":"PBO:0049869"}


id: MONDO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piepkorn karp hickok syndrome","secondary_identifiers":["MEDGEN:418962","MESH:C535774","UMLS:C2931016"],"synonyms":[{"name":"short ribs, polysyndactyly, cranial synostosis, cleft palate cardiovascular and urogenital anomalies and severe ossification defect","type":"related"}],"termid":"MONDO:0043179","xrefs":{"Monarch":{"xref_id":"0043179"}}}


id: FYPO:0002393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein acetylation during vegetative growth","synonyms":[{"name":"abolished protein acetylation during mitotic cell cycle","type":"related"},{"name":"protein acetylation abolished during vegetative growth","type":"exact"},{"name":"protein acetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002393"}


id: MONDO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular reaction of the skin characterized by erythema and wheal formation due to localized increase of vascular permeability. The causative mechanism may be allergy, infection, or stress.","definition_xrefs":["MESH:D014581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"urticaria","secondary_identifiers":["ICD10CM:L50","HP:0001025","UMLS:C0042109","EFO:0005531","MEDGEN:22587","DOID:1555","ICD9:708.8","ICD9:708.9","NCIT:C3432","SCTID:126485001","ICD9:708"],"synonyms":[{"name":"Urticarias","type":"related"},{"name":"hives","type":"exact"},{"name":"urticaria","type":"exact"},{"name":"urticaria (disease)","type":"exact"}],"termid":"MONDO:0005492","xrefs":{"Monarch":{"xref_id":"0005492"}}}


id: MONDO:0042961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"sacral hemangiomas multiple congenital abnormalities","secondary_identifiers":["MEDGEN:419414","UMLS:C2931443","MESH:C537222","GARD:317"],"termid":"MONDO:0042961","xrefs":{"Monarch":{"xref_id":"0042961"}}}


id: PATO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000699 glutinous (obsolete PATO:0000699)","termid":"PATO:0000699"}


id: PBO:0059568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1L, pseudogene","termid":"PBO:0059568"}


id: GO:1990899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process following clipping in double-strand break processing of SPO11 induced breaks, where long-tract single-stranded 3'-end DNA is generated from naked (SPO11 has been removed) 5' ends.","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break resectioning (obsolete GO:1990899)","termid":"GO:1990899"}


id: GO:2000051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"},{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"negatively_regulates","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-canonical Wnt signaling pathway","synonyms":[{"name":"negative regulation of beta-catenin-independent Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:2000051"}


id: PBO:0003722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ran1","termid":"PBO:0003722"}


id: PBO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 63","termid":"PBO:0071222"}


id: MONDO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in eyes or located in upper respiratory tract of domestic rabbits, has material basis in Myxoma virus, which is transmitted by mosquitos, transmitted by biting flies or transmitted by direct contact. The infection has symptom conjunctivitis with a milky discharge from the inflamed eye and has symptom breathing difficulties.","definition_xrefs":["EFO:0007327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious myxomatosis","secondary_identifiers":["MESH:D009234"],"termid":"MONDO:0005811","xrefs":{"Monarch":{"xref_id":"0005811"}}}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: GO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + X-phosphate = XH + phenylphosphate.","definition_xrefs":["UM-BBD_reactionID:r0155","PMID:16980461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phenol kinase activity","secondary_identifiers":["MetaCyc:PHENOLPHOS-RXN"],"termid":"GO:0018720"}


id: PBO:0082408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymerizes to form microtubules; mutation in human ortholog is associated with congenital fibrosis of the extraocular muscles (CFEOM) with polymicrogyria","termid":"PBO:0082408"}


id: PBO:0082129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin- and formin-interacting protein; nucleation-promoting factor (NPF) for Bni1p and Bnr1p during actin cable assembly and organization; enhances Bnr1p-mediated actin nucleation, alleviating Hof1p inhibition through competitive binding; interacts with Bni1p via a C-terminal triple helical coiled-coil domain; role in polarized cell growth; isolated as a bipolar budding mutant; localizes to the presumptive bud site, small bud tips, the bud neck and secretory vesicles; potential Cdc28p substrate","termid":"PBO:0082129"}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: MONDO:0005201
data:
  {"annotated_genes":["SJAG_03824","SJAG_00930","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[87061,87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","definition":"A type of heart disorder referring to the inability of the ventricles to fill with blood because the myocardium (heart muscle) stiffens and looses its flexibility. Causes include replacement of the myocardium with scar tissue, abnormal cellular infiltration of the myocardium, or deposition of a substance (e.g., amyloid) in the myocardium.","definition_xrefs":["NCIT:C62798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"restrictive cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:40111","icd11.foundation:316495940","EFO:0002630","NANDO:1200292","SCTID:415295002","Orphanet:217632","UMLS:C0007196","ICD9:425.4","NANDO:2200233","DOID:397","GARD:20531","NANDO:2100058","NANDO:1200293","MESH:D002313","MedDRA:10038748"],"synonyms":[{"name":"cardiomyopathy, constrictive","type":"exact"},{"name":"familial restrictive cardiomyopathy","type":"narrow"},{"name":"primary restrictive cardiomyopathy","type":"exact"},{"name":"restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0005201","terms_by_termid":{"MONDO:0009290":null,"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0005201"}}}


id: MONDO:0013244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type E in which the cause of the disease is a mutation in the PTHLH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly type E","termid":"MONDO:0019677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type E2","secondary_identifiers":["MEDGEN:461994","UMLS:C3150644","OMIM:613382","DOID:0110976","GARD:15654"],"synonyms":[{"name":"BDE2","type":"exact"},{"name":"PTHLH brachydactyly type E","type":"exact"},{"name":"brachydactyly type E caused by mutation in PTHLH","type":"exact"},{"name":"brachydactyly type E2","type":"exact"},{"name":"brachydactyly, type E2","type":"related"}],"termid":"MONDO:0013244","xrefs":{"Monarch":{"xref_id":"0013244"}}}


id: MONDO:0044887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin lymphoma that arises from the central nervous system.","definition_xrefs":["NCIT:C114779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system lymphoma","termid":"MONDO:0002571"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"central nervous system non-hodgkin lymphoma","secondary_identifiers":["SCTID:448254007","UMLS:C2213246","MEDGEN:745669"],"synonyms":[{"name":"Central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"Primary Central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"non-Hodgkin lymphoma of central nervous system","type":"exact"}],"termid":"MONDO:0044887","xrefs":{"Monarch":{"xref_id":"0044887"}}}


id: PBO:0074857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45A","termid":"PBO:0074857"}


id: GO:1900960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900960"}


id: GO:0043161
data:
  {"annotated_genes":["SJAG_01253","SJAG_01489","SJAG_00173","SJAG_01544","SJAG_00644","SJAG_01022","SJAG_00312","SJAG_01203","SJAG_00452","SJAG_01760","SJAG_00146","SJAG_01014","SJAG_00293","SJAG_01131","SJAG_03151","SJAG_03968","SJAG_07000","SJAG_01956","SJAG_00855","SJAG_04540","SJAG_04229","SJAG_04539","SJAG_02341","SJAG_03651","SJAG_00666","SJAG_00192","SJAG_00941","SJAG_00651","SJAG_02197","SJAG_00128","SJAG_01737","SJAG_01900","SJAG_02562","SJAG_02723","SJAG_02591","SJAG_02186","SJAG_04477","SJAG_01472","SJAG_01497","SJAG_03417","SJAG_04151","SJAG_03408","SJAG_01392","SJAG_03345","SJAG_04573","SJAG_04384","SJAG_01679","SJAG_02651","SJAG_00188","SJAG_01528","SJAG_03858","SJAG_04853","SJAG_02900","SJAG_04335","SJAG_01617","SJAG_00552","SJAG_00738","SJAG_04520","SJAG_02992","SJAG_00766","SJAG_00435","SJAG_02502","SJAG_01637","SJAG_04357","SJAG_02419","SJAG_04655","SJAG_04306","SJAG_02705","SJAG_03699","SJAG_04144","SJAG_02041","SJAG_04612","SJAG_03048","SJAG_01467","SJAG_03561","SJAG_02244","SJAG_03037","SJAG_02485","SJAG_00762","SJAG_05329","SJAG_04888","SJAG_03657","SJAG_00071","SJAG_02162","SJAG_05236","SJAG_01801","SJAG_00642","SJAG_03454","SJAG_01886","SJAG_00808","SJAG_01074","SJAG_00475","SJAG_00300","SJAG_04484","SJAG_05274","SJAG_01210","SJAG_02021","SJAG_04619","SJAG_03351","SJAG_04309","SJAG_04541","SJAG_04969","SJAG_01678","SJAG_03809","SJAG_00054","SJAG_01535","SJAG_00052","SJAG_04633","SJAG_05022","SJAG_02822","SJAG_04572","SJAG_01068","SJAG_00341","SJAG_04211","SJAG_03680","SJAG_01585","SJAG_00712","SJAG_03175","SJAG_04661","SJAG_05316","SJAG_03385","SJAG_00778","SJAG_03763","SJAG_03219","SJAG_03638","SJAG_01593","SJAG_03321","SJAG_03350","SJAG_01556","SJAG_01134","SJAG_03191","SJAG_03575","SJAG_04088","SJAG_03615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63880,64429,67525,67721,68249,71555,71753,72743,72896,73071,73456,73674,73877,73962,74273,74810,74892,75468,75987,76048,76930,77337,77539,78239,78676,79152,79182,79705,79786,79792,79901,80185,80233,80490,80694,80822,80972,81311,81358,81471,81644,81784,82175,90164,90453,95243,95892,96054,96898,97722,98148,99631,100318,100732,101563,103129,103597,104048,106312,108428,111230,111298,112713,113148,113158,113702,114826,115133,116272,117146,117284,118414,119232,120048],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[109574,97080,67497,65507,80780,81745,61412,116287,71839,78356,79603,82183,58047,72618,74804,80890,106831,75741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031145"},{"annotations":[116430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[109984,111629,111736,112325,115633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"},{"annotations":[105356,91139,89661,114993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"},{"annotations":[104308],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905785"},{"annotations":[108922,79103],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0032435"},{"annotations":[112850,78332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071630"},{"annotations":[90821],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905786"},{"annotations":[113715,119102,104330,110882,108630],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032436"},{"annotations":[116648],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032434"},{"annotations":[71595,78399,98625,106782,91143,117432,105921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990116"},{"annotations":[99699,97454,82144,61197,73611,104053,96246,76142,106836,109199,106552,111072,118875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031146"},{"annotations":[76150,65594,98866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"},{"relation_name":"is_a","term_name":"proteasomal protein catabolic 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ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-75815"],"synonyms":[{"name":"proteasomal pathway","type":"exact"},{"name":"proteasomal processing","type":"related"},{"name":"proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"proteasome pathway","type":"related"}],"termid":"GO:0043161","terms_by_termid":{"GO:0031145":null,"GO:0031146":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0043161":null,"GO:0071596":null,"GO:0071629":null,"GO:0071630":null,"GO:0140708":null,"GO:0180027":null,"GO:1905785":null,"GO:1905786":null,"GO:1990116":null}}


id: GO:0008070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by cells of the germ line.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, germ-line encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, germ-line encoded","type":"exact"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, germ-line encoded","type":"exact"}],"termid":"GO:0008070"}


id: MONDO:0014493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatic mutation in the CTLA4 gene resulting in only a single functional gene. Haploinsufficiency for CTLA4 is associated with autoimmune lymphoproliferative syndrome, type V.","definition_xrefs":["NCIT:C126341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency","secondary_identifiers":["GARD:12316","MEDGEN:863651","Orphanet:436159","UMLS:C4015214","OMIM:616100"],"synonyms":[{"name":"ALPS due to CTLA4 haploinsufficiency","type":"exact"},{"name":"ALPS type 5","type":"exact"},{"name":"ALPS type V","type":"exact"},{"name":"ALPS5","type":"related"},{"name":"CHAI","type":"exact"},{"name":"CTLA-4 haploinsufficiency with autoimmune infiltration disease","type":"exact"},{"name":"CTLA4 haploinsufficiency","type":"exact"},{"name":"CTLA4 haploinsufficiency with autoimmune infiltration","type":"related"},{"name":"autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type 5","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type V","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 5","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type V","type":"related"},{"name":"chai","type":"exact"},{"name":"immune dysregulation with autoimmunity, immunodeficiency, and lymphoproliferation","type":"exact"}],"termid":"MONDO:0014493","xrefs":{"Monarch":{"xref_id":"0014493"}}}


id: MONDO:0017215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calciphylaxis is a disease in which blood vessels (veins and arteries) become blocked by a build-up of calcium in the walls of the vessels, preventing blood from flowing to the skin or internal organs. The lack of blood flow (ischemia) damages healthy tissue and causes itto die (necrosis). The most obvious and frequent symptom of calciphylaxis is damage to the skin, as ulcers can developand become infected easily. Calciphylaxis can also affect fat tissue, internal organs, and skeletal muscle, causing infections, pain, and organ failure.These symptoms are often irreversible, and many individuals with calciphylaxis may not survive more thana few months after they are diagnosed due to infection that spreads throughout the body (sepsis), or organ failure. The exact cause of calciphylaxis is unknown. Treatments may include medications to reduce pain, antibiotics to treat infections, and various approaches to preventing the development or worsening of this condition.","definition_xrefs":["GARD:0005980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcinosis","termid":"MONDO:0002123"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calciphylaxis","secondary_identifiers":["NCIT:C84607","DOID:4734","MESH:D002115","icd11.foundation:574291789","Orphanet:280062","GARD:5980","ICD9:275.49","MedDRA:10051714","MEDGEN:2404","UMLS:C0006666","SCTID:237900002"],"synonyms":[{"name":"idiopathic calciphylaxis","type":"related"}],"termid":"MONDO:0017215","xrefs":{"Monarch":{"xref_id":"0017215"}}}


id: PBO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control (predicted)","termid":"PBO:0005330"}


id: GO:0140737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular non-membrane bound organelle, consisting of proteinaceous polyhedral shells that encapsulate enzymes, protecting the contents from their surrounding milieu and/or the milieu from reactants in their interior. The self-assembling, 25-42 nm nanocompartment shell, unlike larger bacterial microcompartments, is made of only one protein, and has only a few proteins inside. Shells about vary from about 25-42 nm in diameter. The shell protein has an HK97-like fold and probably evolved from a viral protein. Artificial encapsulin nanocompartments can be expressed and filled with cargo proteins for biotechnological uses. They are found in many bacterial and a few archaeal phyla.","definition_xrefs":["PMID:32918485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"encapsulin nanocompartment","synonyms":[{"name":"protein nanocompartment","type":"broad"}],"termid":"GO:0140737"}


id: PR:Q9Y7Y1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sgm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.07c","synonyms":[{"name":"Spom972h-SPBC365.07c","type":"exact"}],"termid":"PR:Q9Y7Y1"}


id: RO:0002585
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_closure_of","termid":"RO:0002585"}


id: PBO:0051204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-4","termid":"PBO:0051204"}


id: PBO:0004943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr8","termid":"PBO:0004943"}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: PBO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin dependent monooxygenase (predicted)","termid":"PBO:0003815"}


id: GO:0032672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-3 production","secondary_identifiers":["GO:0045399"],"synonyms":[{"name":"regulation of IL-3 production","type":"exact"},{"name":"regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032672"}


id: MONDO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired cyst that is present in the central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system cyst","secondary_identifiers":["EFO:0003760","MEDGEN:138106","MESH:D020863","NCIT:C4657","SCTID:277333006","UMLS:C0349606","HP:0030724"],"synonyms":[{"name":"CNS cyst","type":"exact"},{"name":"Rathke cleft cysts","type":"related"},{"name":"Rathke's cleft cysts","type":"related"},{"name":"Rathkes cleft cysts","type":"related"},{"name":"central nervous system cyst","type":"exact"},{"name":"central nervous system cyst (disease)","type":"exact"},{"name":"cleft cysts, Rathke's","type":"related"},{"name":"cyst of CNS","type":"exact"},{"name":"cyst of Central nervous system","type":"exact"},{"name":"cyst of the CNS","type":"exact"},{"name":"cyst of the Central nervous system","type":"exact"},{"name":"cyst, suprasellar","type":"related"},{"name":"cysts, Rathke cleft","type":"related"},{"name":"cysts, central nervous system","type":"related"},{"name":"cysts, suprasellar","type":"related"},{"name":"suprasellar cyst","type":"related"},{"name":"suprasellar cysts","type":"related"}],"termid":"MONDO:0005262","xrefs":{"Monarch":{"xref_id":"0005262"}}}


id: PBO:0051917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 2","termid":"PBO:0051917"}


id: PBO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 11","termid":"PBO:0071334"}


id: PBO:0091809
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. octosporus rsv1","termid":"PBO:0091809"}


id: GO:0120011
data:
  {"annotated_genes":["SJAG_01590","SJAG_01329","SJAG_03718","SJAG_02375","SJAG_03247","SJAG_00355","SJAG_01722","SJAG_02323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93372,96141,104559,108300,110185,111355,113331,118242],"is_not":false,"summary":null,"term":"GO:0120011"}]},"cv_name":"biological_process","definition":"The transport of sterols between membranes in which a sterol molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","GOC:krc","PMID:24220498","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01329":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03247":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"intermembrane sterol transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120011","terms_by_termid":{"GO:0120011":null}}


id: PBO:0043112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"churchill domain containing 1","termid":"PBO:0043112"}


id: MOD:01485
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(18)O isotope tagged reagent","termid":"MOD:01430"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01485"}


id: MONDO:0013633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any encephalopathy, acute, infection-induced in which the cause of the disease is a mutation in the CPT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute necrotizing encephalopathy of childhood","termid":"MONDO:0016991"},{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute, infection-induced, susceptibility to, 4","secondary_identifiers":["MEDGEN:481790","OMIM:614212","UMLS:C3280160"],"synonyms":[{"name":"CPT2 encephalopathy, acute, infection-induced","type":"exact"},{"name":"IIAE4","type":"related"},{"name":"encephalopathy, acute, infection-induced caused by mutation in CPT2","type":"exact"},{"name":"encephalopathy, acute, infection-induced, 4, susceptibility to","type":"exact"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 4","type":"exact"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0013633","xrefs":{"Monarch":{"xref_id":"0013633"}}}


id: FYPO:0000727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of cytoskeletal structures comprising actin filaments does not occur normally.","definition_xrefs":["GO:0007015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin filament organization during vegetative growth","synonyms":[{"name":"abnormal actin filament organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of actin filament localization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000727"}


id: FYPO:0005389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rqh1 accumulates is greater than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:12023299","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rqh1 foci during cellular response to ionizing radiation","synonyms":[{"name":"increased number of Rqh1 foci during cellular response to IR","type":"exact"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased number of Rqh1 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005389"}


id: PBO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pab2 associates with polyadenylated snoRNAs near the polyadenylation site","termid":"PBO:0017010"}


id: FYPO:0007808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valproic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to valproic acid","synonyms":[{"name":"resistance to valproic acid during mitotic cell cycle","type":"related"},{"name":"resistance to valproic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0007808"}


id: GO:1900392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of transport.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900392)","termid":"GO:1900392"}


id: PBO:0027633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_subtelomere-derived_RNA_level","termid":"PBO:0027633"}


id: MONDO:0007966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to uveal melanoma","termid":"MONDO:0007966","xrefs":{"Monarch":{"xref_id":"0007966"}}}


id: PBO:0051115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-69D","termid":"PBO:0051115"}


id: SO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor rearranged gene cluster","type":"exact"}],"termid":"SO:0000938"}


id: PBO:0058138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436a","termid":"PBO:0058138"}


id: PBO:0067121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 166, pseudogene","termid":"PBO:0067121"}


id: PBO:0060826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 2","termid":"PBO:0060826"}


id: FYPO:0006171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation takes place during anaphase A. Normally, the spindle elongates immediately following assembly during prophase, remains at a static length during metaphase and anaphase A, and elongates further during anaphase B.","definition_xrefs":["PMID:21920317","PMID:9802907","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic spindle elongation","termid":"FYPO:0005417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"mitotic spindle elongation during anaphase A","synonyms":[{"name":"abnormal mitotic spindle elongation during anaphase A","type":"exact"},{"name":"mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"mitotic spindle extension during anaphase A","type":"exact"},{"name":"premature mitotic spindle elongation during anaphase","type":"related"},{"name":"spindle elongation during anaphase A during mitotic cell cycle","type":"related"},{"name":"spindle elongation during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0006171"}


id: GO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}


id: GO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an aleurone grain.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"aleurone grain lumen","termid":"GO:0034422"}


id: PBO:0084432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; encoded within the complex locus MAL4","termid":"PBO:0084432"}


id: PBO:0040504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of transcription and developmental regulator AUTS2","termid":"PBO:0040504"}


id: PBO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 3","termid":"PBO:0061484"}


id: PBO:0074401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10","termid":"PBO:0074401"}


id: PBO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4 (predicted)","termid":"PBO:0008894"}


id: GO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gravitational stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of gravity","termid":"GO:0070998"}


id: PBO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 14","termid":"PBO:0071511"}


id: MONDO:0013174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 13","secondary_identifiers":["MESH:C567713","GARD:15628","OMIM:613193","MEDGEN:413399","UMLS:C2750790","DOID:0110618"],"synonyms":[{"name":"CILD13","type":"exact"},{"name":"DNAAF1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 13","type":"related"},{"name":"ciliary dyskinesia, primary, 13, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 13","type":"exact"},{"name":"primary ciliary dyskinesia 13","type":"exact"},{"name":"primary ciliary dyskinesia 13 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF1","type":"exact"},{"name":"primary ciliary dyskinesia type 13","type":"exact"}],"termid":"MONDO:0013174","xrefs":{"Monarch":{"xref_id":"0013174"}}}


id: MONDO:0008998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cockayne syndrome type III, also known as the mild form of Cockayne syndrome, is a rare genetic disorder that causes early (premature) aging. Unlike the more severe forms of this condition, individuals with Cockayne syndrome type III can have normal growth and development. Symptoms may include sunlight sensitivity (photosensitivity), hearing loss, eye and bone abnormalities, and changes to the brain that can be seen on imaging (brain MRIs). In general, symptoms of Cockayne syndrome type III are usually not noticeable until later in childhood.","direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019303","MONDO:0006025","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome type 3","secondary_identifiers":["icd11.foundation:1401163130","OMIM:216411","GARD:1417","MEDGEN:196713","Orphanet:90324","UMLS:C0751037"],"synonyms":[{"name":"Cockayne syndrome type 3","type":"exact"},{"name":"Cockayne syndrome type C","type":"related"},{"name":"Cockayne syndrome type III","type":"exact"},{"name":"Cockayne syndrome, type III","type":"related"}],"termid":"MONDO:0008998","xrefs":{"Monarch":{"xref_id":"0008998"}}}


id: PBO:0048600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin and obestatin prepropeptide","termid":"PBO:0048600"}


id: GO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lactose, a disaccharide of glucose and galactose, the carbohydrate of milk.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lactose binding","termid":"GO:0030395"}


id: GO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete virulence (obsolete GO:0009406)","synonyms":[{"name":"virulence","type":"exact"}],"termid":"GO:0009406"}


id: PBO:0039106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Abelson helper integration site 1","termid":"PBO:0039106"}


id: MOD:00492
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of glycylglycine, the two glycine residues left after tryptic digestion of ubiquitin.","definition_xrefs":["OMSSA:52","PubMed:12612601","PubMed:12872131","PubMed:11125103","Unimod:121#K","RESID:AA0125#var"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitination signature dipeptidyl lysine","synonyms":[{"name":"GlyGly","type":"related"},{"name":"N6-(glycylglycyl)lysine","type":"exact"},{"name":"N6-glycylglycyl-L-lysine","type":"exact"},{"name":"glyglyk","type":"exact"},{"name":"ubiquitinylation residue","type":"related"}],"termid":"MOD:00492"}


id: MONDO:0015544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired hemophagocytic lymphohistiocytosis associated with malignant disease","secondary_identifiers":["Orphanet:158057","GARD:20027","MEDGEN:1683300","UMLS:C5190710"],"termid":"MONDO:0015544","xrefs":{"Monarch":{"xref_id":"0015544"}}}


id: MONDO:0009411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune polyendocrinopathy type 1, or APECED syndrome, is a genetic disease that manifests in childhood or early adolescence with a combination of chronic mucocutaneous candidiasis, hypoparathyroidism and autoimmune adrenal failure.","definition_xrefs":["Orphanet:3453"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired chronic primary adrenal insufficiency (obsolete MONDO:0015130)","termid":"MONDO:0015130"},{"relation_name":"excluded_subClassOf","term_name":"acquired primary ovarian failure","termid":"MONDO:0019851"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"hereditary hypoparathyroidism","termid":"MONDO:0016165"},{"relation_name":"is_a","term_name":"autoimmune polyendocrinopathy","termid":"MONDO:0017278"},{"relation_name":"is_a","term_name":"autoimmune hypoparathyroidism","termid":"MONDO:0018242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune polyendocrine syndrome type 1","secondary_identifiers":["DOID:0050167","UMLS:C0085859","GARD:8466","NORD:798","ICD9:258.8","OMIM:240300","NCIT:C129727","NANDO:2200738","SCTID:11244009","MEDGEN:39125","NANDO:2200346"],"synonyms":[{"name":"AIRE autoimmune polyendocrinopathy","type":"exact"},{"name":"APECED syndrome","type":"exact"},{"name":"APS 1","type":"related"},{"name":"APS type 1","type":"exact"},{"name":"APS1","type":"exact"},{"name":"Autoimmune Polyglandular Syndrome Type 1","type":"exact"},{"name":"MEDAC syndrome","type":"exact"},{"name":"PGA 1","type":"related"},{"name":"Whitaker syndrom","type":"exact"},{"name":"Whitaker syndrome","type":"related"},{"name":"aire autoimmune polyendocrinopathy","type":"exact"},{"name":"autoimmune hypoparathyroidism-chronic candidiasis-Addison disease syndrome","type":"exact"},{"name":"autoimmune polyendocrine syndrome type 1","type":"exact"},{"name":"autoimmune polyendocrine syndrome, type I, with or without reversible metaphyseal dysplasia","type":"related"},{"name":"autoimmune polyendocrinopathy caused by mutation in AIRE","type":"exact"},{"name":"autoimmune polyendocrinopathy caused by mutation in aire","type":"exact"},{"name":"autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia","type":"exact"},{"name":"autoimmune polyendocrinopathy syndrome type 1","type":"related"},{"name":"autoimmune polyendocrinopathy syndrome, type I, autosomal dominant","type":"related"},{"name":"autoimmune polyendocrinopathy type 1","type":"related"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy","type":"exact"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED)","type":"related"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy syndrome","type":"exact"},{"name":"autoimmune polyglandular syndrome I","type":"exact"},{"name":"autoimmune polyglandular syndrome type 1","type":"exact"},{"name":"autoimmune polyglandular syndrome, type 1","type":"related"},{"name":"ham syndrome","type":"exact"},{"name":"hypoadrenocorticism with hypoparathyroidism and superficial Moniliasis","type":"related"},{"name":"hypoparathyroidism-Addison disease-mucocutaneous candidiasis syndrome","type":"exact"},{"name":"multiple endocrine deficiency-Addison disease-candidiasis syndrome","type":"exact"},{"name":"polyglandular autoimmune syndrome type 1","type":"exact"},{"name":"polyglandular autoimmune syndrome, type 1","type":"related"},{"name":"polyglandular deficiency syndrome, Persian-Jewish type","type":"related"}],"termid":"MONDO:0009411","xrefs":{"Monarch":{"xref_id":"0009411"}}}


id: PBO:0080957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 1","termid":"PBO:0080957"}


id: MONDO:0012602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the RDX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 24","secondary_identifiers":["OMIM:611022","UMLS:C1970239","MESH:C567027","GARD:22626","DOID:0110482","MEDGEN:370208"],"synonyms":[{"name":"DFNB24","type":"narrow"},{"name":"RDX autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in RDX","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 24","type":"exact"},{"name":"deafness, autosomal recessive 24","type":"narrow"},{"name":"deafness, autosomal recessive type 24","type":"narrow"}],"termid":"MONDO:0012602","xrefs":{"Monarch":{"xref_id":"0012602"}}}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: PBO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium sodium-activated channel subfamily T member 2","termid":"PBO:0052218"}


id: MONDO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital microgastria is a rare malformation where the embryological development of the stomach is interrupted, leading to an abnormally small foregut in newborns and characterized by extreme feeding intolerance and malnutrition along with growth retardation and death if untreated. It is usually associated with multiple congenital anomalies.","definition_xrefs":["Orphanet:199293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital microgastria","secondary_identifiers":["UMLS:C0266150","MEDGEN:82732","GARD:20330","ICD9:750.7","icd11.foundation:1695007532","SCTID:83714006"],"termid":"MONDO:0016041","xrefs":{"Monarch":{"xref_id":"0016041"}}}


id: GO:0044878
data:
  {"annotated_genes":["SJAG_02266","SJAG_04280","SJAG_03073","SJAG_00082","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91875,96306,102476,103384,118025],"is_not":false,"summary":null,"term":"GO:0044878"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint that detects a defect in cytokinesis and prevents further rounds of nuclear division until cytokinesis is completed.","definition_xrefs":["PMID:17538026","GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02266":null,"SJAG_03073":null,"SJAG_04280":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic cytokinesis checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903820"],"synonyms":[{"name":"cytokinesis after mitosis checkpoint","type":"related"},{"name":"defective cytokinesis checkpoint","type":"related"},{"name":"mitotic cytokinesis checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signaling pathway involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling cascade involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling pathway involved in mitotic cytokinesis checkpoint","type":"related"}],"termid":"GO:0044878","terms_by_termid":{"GO:0044878":null}}


id: MONDO:0800290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Li-fraumeni-like syndrome","secondary_identifiers":["MEDGEN:382523","UMLS:C2675080"],"synonyms":[{"name":"LFL","type":"exact"}],"termid":"MONDO:0800290","xrefs":{"Monarch":{"xref_id":"0800290"}}}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: SO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an UST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST_match","synonyms":[{"name":"UST match","type":"exact"}],"termid":"SO:0001470"}


id: PBO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Membrane Bound O-Acyl Transferase (MBOAT) family","termid":"PBO:0008804"}


id: GO:0015048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of electrons between pyridine nucleotides (obligatory two-electron carriers) and hemes or (2Fe-2S) centers (obligatory one-electron carriers) in respiration, photosynthesis, and many oxygenase systems.","definition_xrefs":["PMID:7589982"],"gene_count":0,"genotype_count":0,"name":"obsolete phthalate dioxygenase reductase activity (obsolete GO:0015048)","termid":"GO:0015048"}


id: PBO:0091662
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 0.46","termid":"PBO:0091662"}


id: PBO:0056853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain associated RNA transcript","termid":"PBO:0056853"}


id: FYPO:0004600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal transcriptional response to pheromone","synonyms":[{"name":"normal regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004600"}


id: PBO:0031416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell-substrate_adhesion","termid":"PBO:0031416"}


id: PBO:0042292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 epsilon subunit of T-cell receptor complex","termid":"PBO:0042292"}


id: PBO:0030154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030154"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: FYPO:0002376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"decreased phosphorylation during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002376"}


id: MONDO:0006838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of cutaneous tuberculosis. It is seen predominantly in women and typically involves the nasal mucosa; buccal mucosa; and conjunctival mucosa.","definition_xrefs":["MESH:D008177"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tuberculosis","termid":"MONDO:0018076"},{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lupus vulgaris","secondary_identifiers":["SCTID:10528009","UMLS:C0024131","icd11.foundation:1292667822","EFO:1001023","MEDGEN:9821","MedDRA:10025143"],"termid":"MONDO:0006838","xrefs":{"Monarch":{"xref_id":"0006838"}}}


id: SO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a gene that is not the complete gene.","direct_ancestors":[{"relation_name":"has_quality","term_name":"fragmentary","termid":"SO:0000731"},{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_fragment","synonyms":[{"name":"gene fragment","type":"exact"}],"termid":"SO:0000997"}


id: GO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac skeleton development","synonyms":[{"name":"heart fibrous skeleton development","type":"exact"}],"termid":"GO:0003204"}


id: FYPO:0002703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in autophagosomes is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level in autophagosome","synonyms":[{"name":"increased autophagosomal protein level during vegetative growth","type":"exact"},{"name":"increased protein level in autophagic vacuole during vegetative growth","type":"exact"},{"name":"increased protein level in autophagosome during mitotic cell cycle","type":"related"},{"name":"increased protein level in autophagosome during vegetative growth","type":"exact"},{"name":"protein accumulation in autophagosomes","type":"exact"}],"termid":"FYPO:0002703"}


id: PBO:0067426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 545, pseudogene","termid":"PBO:0067426"}


id: PBO:0005640
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COX18","termid":"PBO:0005640"}


id: PBO:0046698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS proto-oncogene 2, transcription factor","termid":"PBO:0046698"}


id: PBO:0017602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Rib1 (predicted)","termid":"PBO:0017602"}


id: PBO:0064297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 5","termid":"PBO:0064297"}


id: PBO:0042584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDPF1 pseudogene 1","termid":"PBO:0042584"}


id: FYPO:0001864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"mating without glucose starvation","synonyms":[{"name":"conjugation without glucose starvation","type":"exact"},{"name":"mating in the absence of glucose starvation","type":"exact"},{"name":"mating without glucose depletion","type":"exact"},{"name":"mating without glucose deprivation","type":"exact"}],"termid":"FYPO:0001864"}


id: GO:1990338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha4, beta2 and gamma3 polypeptide chains.","definition_xrefs":["GOC:dph","PMID:15979864","PMID:17453709","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-14 complex","synonyms":[{"name":"laminin-423","type":"exact"}],"termid":"GO:1990338"}


id: PBO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 14","termid":"PBO:0042152"}


id: MONDO:8000031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subtype of a disorder (obsolete MONDO:8000031)","secondary_identifiers":["Orphanet:557494"],"termid":"MONDO:8000031","xrefs":{"Monarch":{"xref_id":"8000031"}}}


id: PBO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_break-induced_loss_of_heterozygosity","termid":"PBO:0034434"}


id: PBO:0051663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innate immunity activator","termid":"PBO:0051663"}


id: GO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell projection organization","synonyms":[{"name":"down regulation of cell projection organization","type":"exact"},{"name":"down-regulation of cell projection organization","type":"exact"},{"name":"downregulation of cell projection organization","type":"exact"},{"name":"inhibition of cell projection organization","type":"narrow"},{"name":"negative regulation of cell projection organisation","type":"exact"},{"name":"negative regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031345"}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: MONDO:1012257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida with raduschisis, non-human animal","termid":"MONDO:1011670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida with raduschisis, domestic cat","secondary_identifiers":["OMIA:000936-9685"],"termid":"MONDO:1012257","xrefs":{"Monarch":{"xref_id":"1012257"}}}


id: PATO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal orientation","synonyms":[{"name":"anterodorsally directed","type":"exact"}],"termid":"PATO:0002491"}


id: PBO:0064972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 28, pseudogene","termid":"PBO:0064972"}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: PBO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 20","termid":"PBO:0070996"}


id: GO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-formyl-L-lysine.","definition_xrefs":["RESID:AA0211"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine formylation (obsolete GO:0018257)","termid":"GO:0018257"}


id: MONDO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of breast fibroadenoma without clinical significance. It is characterized by distortion and compression of the ducts by proliferating stromal cells.","definition_xrefs":["NCIT:C4271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibroadenoma","termid":"MONDO:0002056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast intracanalicular fibroadenoma","secondary_identifiers":["ICDO:9011/0","UMLS:C0334496","DOID:2656","MEDGEN:137772"],"synonyms":[{"name":"breast intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular breast fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma","type":"exact"},{"name":"intracanalicular fibroadenoma of breast","type":"exact"},{"name":"intracanalicular fibroadenoma of the breast","type":"exact"}],"termid":"MONDO:0002377","xrefs":{"Monarch":{"xref_id":"0002377"}}}


id: GO:0021606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the accessory nerve to attain its fully functional state. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"accessory nerve development","termid":"GO:0021565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve maturation","synonyms":[{"name":"CN XI maturation","type":"related"},{"name":"spinal accessory nerve maturation","type":"related"}],"termid":"GO:0021606"}


id: PR:Q9P7X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12914:SF2","OMA:SCHPO03092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.09","secondary_identifiers":["UniProtKB:Q9P7X6"],"synonyms":[{"name":"Spom972h-GINS1","type":"exact"}],"termid":"PR:Q9P7X6"}


id: GO:0140623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a type I pilus.","definition_xrefs":["PMID:1679330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"type I pilus assembly","synonyms":[{"name":"T1P assembly","type":"broad"},{"name":"type 1 pilus biogenesis","type":"exact"},{"name":"type I fimbria assembly","type":"exact"},{"name":"type I fimbria biogenesis","type":"exact"},{"name":"type I fimbriae assembly","type":"exact"},{"name":"type I fimbriae biogenesis","type":"exact"},{"name":"type I fimbrial assembly","type":"exact"},{"name":"type I fimbrial biogenesis","type":"exact"},{"name":"type I fimbrium assembly","type":"exact"},{"name":"type I fimbrium biogenesis","type":"exact"}],"termid":"GO:0140623"}


id: GO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the lysis of peptide bonds with broad specificity similar to that of pepsin A. Clots milk by cleavage of a single Ser-Phe-l-Met-Ala bond in kappa-casein.","definition_xrefs":["EC:3.4.23.4"],"gene_count":0,"genotype_count":0,"name":"obsolete chymosin activity (obsolete GO:0030602)","synonyms":[{"name":"chymosin activity","type":"exact"},{"name":"rennin","type":"related"},{"name":"rennin (but this should be avoided since it leads to confusion with renin)","type":"related"}],"termid":"GO:0030602"}


id: MONDO:0012504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly-tall stature-scoliosis-hearing loss syndrome is characterized by camptodactyly, tall stature, scoliosis, and hearing loss (CATSHL). It has been described in around 30 individuals from seven generations of the same family. The syndrome is caused by a missense mutation in the FGFR3 gene, leading to a partial loss of function of the encoded protein, which is a negative regulator of bone growth.","definition_xrefs":["Orphanet:85164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly-tall stature-scoliosis-hearing loss syndrome","secondary_identifiers":["GARD:10012","OMIM:610474","UMLS:C1864852","MESH:C537975","MEDGEN:355844","DOID:0111160"],"synonyms":[{"name":"CATSHL syndrome","type":"exact"},{"name":"CATSHLS","type":"related"},{"name":"camptodactyly, tall stature, and hearing loss syndrome","type":"related"}],"termid":"MONDO:0012504","xrefs":{"Monarch":{"xref_id":"0012504"}}}


id: MONDO:0006247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rare tumors that affect the hematopoietic and lymphoid tissues. The cells of origin are the histiocytes and accessory cells. They can occur at any age and show no significant variations in geographical distribution. This category includes the histiocytic sarcoma, Langerhans cell histiocytosis, Langerhans cell sarcoma, interdigitading dendritic cell sarcoma/tumor, follicular dendritic cell sarcoma/tumor, and dendritic cell sarcoma, not otherwise specified. (WHO, 2001)","definition_xrefs":["NCIT:C9294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"histiocytic and dendritic cell neoplasm","secondary_identifiers":["GARD:19441","MEDGEN:232291","Orphanet:98287","DOID:5621","UMLS:C1334030","EFO:1000297"],"synonyms":[{"name":"histiocytic and Dendritic cell neoplasms","type":"exact"},{"name":"histiocytic and Dendritic cell tumors","type":"exact"},{"name":"histiocytic and Dendritic cell tumours","type":"exact"},{"name":"histiocytic and dendritic cell","type":"related"},{"name":"histiocytic and dendritic cell cancer","type":"related"},{"name":"histiocytic and dendritic cell neoplasm","type":"exact"},{"name":"histiocytic and dendritic cell tumor","type":"related"},{"name":"histiocytic and dendritic cell tumour","type":"related"}],"termid":"MONDO:0006247","xrefs":{"Monarch":{"xref_id":"0006247"}}}


id: PATO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete refractory (obsolete PATO:0002531)","termid":"PATO:0002531"}


id: PBO:0039165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 8","termid":"PBO:0039165"}


id: MONDO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of glandular epithelium characterized by the presence of clear or hobnail cells within a dense fibrous stroma and cystic structures.","definition_xrefs":["NCIT:C40086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell cystadenofibroma","termid":"MONDO:0003693"},{"relation_name":"is_a","term_name":"ovarian clear cell adenofibroma","termid":"MONDO:0003695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell cystadenofibroma","secondary_identifiers":["DOID:5896","MEDGEN:275283","UMLS:C1518695"],"synonyms":[{"name":"clear cell cystadenofibroma of ovary","type":"exact"},{"name":"ovarian clear cell cystadenofibroma","type":"exact"},{"name":"ovary clear cell cystadenofibroma","type":"exact"}],"termid":"MONDO:0003694","xrefs":{"Monarch":{"xref_id":"0003694"}}}


id: PBO:0002664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein involved in autophagy Atg18c","termid":"PBO:0002664"}


id: GO:0052876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2O + methylamine + 2 oxidized [amicyanin] = formaldehyde + 2 H+ + NH4+ + 2 reduced [amicyanin].","definition_xrefs":["RHEA:30207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","termid":"GO:0052877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methylamine dehydrogenase (amicyanin) activity","secondary_identifiers":["UM-BBD_reactionID:r0075","EC:1.4.9.1","KEGG_REACTION:R00606"],"synonyms":[{"name":"MADH activity","type":"broad"},{"name":"amine dehydrogenase","type":"broad"},{"name":"methylamine dehydrogenase activity","type":"exact"},{"name":"methylamine:amicyanin oxidoreductase (deaminating) activity","type":"exact"},{"name":"primary-amine dehydrogenase","type":"broad"}],"termid":"GO:0052876"}


id: PBO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mei2","termid":"PBO:0004753"}


id: PBO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCDC55 ortholog","termid":"PBO:0002858"}


id: FYPO:0001354
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121678],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[121220,121205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121303],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121547,121271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121679],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_04522","SJAG_02392","SJAG_04280"],"name":"abnormal cellular component assembly during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_04522","SJAG_02592"],"single_locus_genotype_uniquenames":["pom1delta","sty1delta","mid1delta","rga4delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level during vegetative growth","type":"exact"},{"name":"abnormal cellular component assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001354","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0005224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separase/separin","termid":"PBO:0005224"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: PBO:0053374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 299","termid":"PBO:0053374"}


id: FYPO:0006957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidinol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular histidinol level","synonyms":[{"name":"increased cellular L-histidinol level","type":"exact"},{"name":"increased cellular histidinol level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidinol level during vegetative growth","type":"exact"},{"name":"increased histidinol accumulation","type":"related"}],"termid":"FYPO:0006957"}


id: MONDO:0021605
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the upper or lower eyelid.","definition_xrefs":["NCIT:C4354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid neoplasm","termid":"MONDO:0002235"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"benign eyelid neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:231824001","UMLS:C0339107","MEDGEN:137911"],"synonyms":[{"name":"benign eyelid neoplasm","type":"exact"},{"name":"benign eyelid tumor","type":"exact"},{"name":"benign eyelid tumour","type":"exact"},{"name":"benign neoplasm of eyelid","type":"exact"},{"name":"benign neoplasm of the eyelid","type":"exact"},{"name":"benign tumor of eyelid","type":"exact"},{"name":"benign tumor of the eyelid","type":"exact"},{"name":"benign tumour of eyelid","type":"exact"},{"name":"benign tumour of the eyelid","type":"exact"},{"name":"eyelid benign neoplasm","type":"exact"}],"termid":"MONDO:0021605","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0021605"}}}


id: PBO:0087829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIB B-related factor; one of three subunits of RNA polymerase III transcription initiation factor TFIIIB, binds TFIIIC and TBP and recruits RNA pol III to promoters, amino-terminal half is homologous to TFIIB; mutations in human homolog are associated with autosomal recessive cerebellar-facial-dental syndrome","termid":"PBO:0087829"}


id: MONDO:0018980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrofacial dysostosis, Kennedy-Teebi type was reported as a new type of acrofacial dysostosis due to the presence of manifestations not usually seen in Nager syndrome (NS) such as microcephaly, blepharophimosis, microtia, a peculiar beakednose, cleft lip and palate, symmetrical involvement of the thumbs and great toes and developmental delay. It has since been suggested that these features can also be a part of the NS phenotype.","definition_xrefs":["Orphanet:64542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofacial dysostosis, Kennedy-Teebi type","secondary_identifiers":["GARD:18859","MEDGEN:929763","SCTID:720427009","UMLS:C4304094"],"synonyms":[{"name":"Kennedy-Teebi syndrome","type":"exact"}],"termid":"MONDO:0018980","xrefs":{"Monarch":{"xref_id":"0018980"}}}


id: GO:0070575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a mature peptide mating pheromone by proteolysis and/or modification of a peptide precursor, occurring in the context of pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone maturation","termid":"GO:0007323"},{"relation_name":"regulates","term_name":"pheromone-induced unidirectional conjugation","termid":"GO:0000762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"peptide mating pheromone maturation involved in regulation of pheromone-induced unidirectional conjugation","synonyms":[{"name":"peptide mating pheromone formation involved in pheromone-induced unidirectional conjugation","type":"exact"},{"name":"peptide mating pheromone processing involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0070575"}


id: GO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"negatively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell chemotaxis","termid":"GO:0060755"}


id: MONDO:0020518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hashimoto-Pritzker histiocytosis (HPH) is a variant of Langerhans cell histiocytosis characterized by multiple disseminated skin lesions (firm, red-brown, painless papulo-nodules).","definition_xrefs":["Orphanet:99872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to childhood","termid":"MONDO:0017025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Hashimoto-Pritzker syndrome","secondary_identifiers":["ICD9:277.89","GARD:2604","MESH:C535843","UMLS:C3661439","icd11.foundation:1011705244","MEDGEN:775638","SCTID:404160007"],"synonyms":[{"name":"Hashimoto-Pritzker disease","type":"related"},{"name":"Hashimoto-Pritzker histiocytosis","type":"related"},{"name":"congenital Langerhans cell histiocytosis","type":"exact"}],"termid":"MONDO:0020518","xrefs":{"Monarch":{"xref_id":"0020518"}}}


id: PBO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled Coil protein Quantitatively enriched","termid":"PBO:0005523"}


id: MONDO:1011810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryoblastic leukemia, non-human animal","secondary_identifiers":["OMIA:000630"],"termid":"MONDO:1011810","xrefs":{"Monarch":{"xref_id":"1011810"}}}


id: PBO:0057080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181a-2","termid":"PBO:0057080"}


id: PBO:0109230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF7 pseudogene 1","termid":"PBO:0109230"}


id: PBO:0031753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_long_and_short_cells_(obsolete_FYPO:0000454)","termid":"PBO:0031753"}


id: PBO:0045686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 6","termid":"PBO:0045686"}


id: PBO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_recombination_double-strand_break_repair","termid":"PBO:0034616"}


id: PR:O94249
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC13B11.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13B11.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.02c","synonyms":[{"name":"Spom972h-SPCC13B11.02c","type":"exact"}],"termid":"PR:O94249"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: FYPO:0004881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle disassembly lasts for a longer time than normal.","definition_xrefs":["PomBase:mah","GO:0051228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic spindle disassembly","synonyms":[{"name":"increased duration of mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"increased duration of spindle disassembly during mitotic cell cycle","type":"exact"},{"name":"prolonged mitotic spindle disassembly","type":"exact"}],"termid":"FYPO:0004881"}


id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: PBO:0052458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 7 pseudogene 1","termid":"PBO:0052458"}


id: PBO:0110505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBXN2A pseudogene 1","termid":"PBO:0110505"}


id: PBO:0076134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase ADP-forming subunit beta","termid":"PBO:0076134"}


id: GO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor of a target cell. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:12467241","PMID:12524386","PMID:15585605","PMID:12855817","GOC:add","PMID:15728447","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-168898"],"synonyms":[{"name":"TLR signaling pathway","type":"exact"},{"name":"toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002224"}


id: PBO:0061265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notochord homeobox","termid":"PBO:0061265"}


id: PBO:0117007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCK antisense RNA 1","termid":"PBO:0117007"}


id: MONDO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare genetic lethal multiple congenital anomalies/dysmorphic syndrome characterized by early intrauterine growth retardation, generalized edema, craniofacial dysmorphism (such as microcephaly, brachycephaly, frontal bossing, hypertelorism, short palpebral fissures, or absent nasal bone), cerebellar hypoplasia, sex reversal in male fetuses, congenital heart defects (including septal and valve defects and cardiomegaly), and late fetal loss. [Orphanet:580933]","gene_count":0,"genotype_count":0,"name":"obsolete lethal brain and heart developmental defects (obsolete MONDO:0035581)","secondary_identifiers":["Orphanet:580933"],"termid":"MONDO:0035581","xrefs":{"Monarch":{"xref_id":"0035581"}}}


id: PBO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glucose_import","termid":"PBO:0030818"}


id: GO:0022824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"},{"relation_name":"is_a","term_name":"transmitter-gated channel activity","termid":"GO:0022835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0038023","GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"transmitter-gated monoatomic ion channel activity","synonyms":[{"name":"ionotropic neurotransmitter receptor activity","type":"narrow"},{"name":"transmitter-gated ion channel activity","type":"broad"}],"termid":"GO:0022824"}


id: PBO:0072992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 1","termid":"PBO:0072992"}


id: GO:1990783
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasm situated near, or occurring around, a phagosome.","definition_xrefs":["PMID:18250451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"periphagosomal region of cytoplasm","termid":"GO:1990783"}


id: PBO:0031206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_calcium_ion","termid":"PBO:0031206"}


id: PR:O94400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pbr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD and RING finger domain-containing protein C126.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.07c","synonyms":[{"name":"Spom972h-pbr1","type":"exact"}],"termid":"PR:O94400"}


id: GO:0006886
data:
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id: GO:0005724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Heterochromatic regions of the chromosome found at the telomeres of a chromosome in the nucleus.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear telomeric heterochromatin (obsolete GO:0005724)","termid":"GO:0005724"}


id: PBO:0040210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 3","termid":"PBO:0040210"}


id: SO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box C/D sequence motif, guiding the methylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_scaRNA_gene","synonyms":[{"name":"C/D scaRNA gene","type":"exact"}],"termid":"SO:0002372"}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: PBO:0047999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 1","termid":"PBO:0047999"}


id: GO:0036285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a SAGA complex, a SAGA-type histone acetyltransferase complex that contains Spt8 (in budding yeast) or a homolog thereof.","definition_xrefs":["PMID:10637607","GOC:mah","PMID:22456315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"SAGA complex assembly","synonyms":[{"name":"SAGA complex formation","type":"exact"}],"termid":"GO:0036285"}


id: MONDO:0958005
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87923],"is_not":false,"summary":null,"term":"MONDO:0958005"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"is_obsolete":false,"name":"Hoxha-Aliu syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882736","MEDGEN:1846017","OMIM:620662"],"termid":"MONDO:0958005","terms_by_termid":{"MONDO:0958005":null},"xrefs":{"Monarch":{"xref_id":"0958005"}}}


id: GO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-phenanthrene glycosyltransferase activity (obsolete GO:0018718)","termid":"GO:0018718"}


id: GO:0000098
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfur amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1614558"],"synonyms":[{"name":"sulfur amino acid breakdown","type":"exact"},{"name":"sulfur amino acid catabolism","type":"exact"},{"name":"sulfur amino acid degradation","type":"exact"},{"name":"sulphur amino acid catabolic process","type":"exact"},{"name":"sulphur amino acid catabolism","type":"exact"}],"termid":"GO:0000098","terms_by_termid":{"GO:0019450":null}}


id: PBO:0031497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0031497"}


id: MONDO:0009183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa with pyloric atresia is a severe subtype of junctional epidermolysis bullosa (JEB) characterized by generalized blistering at birth and congenital atresia of the pylorus and rarely of other portions of the gastrointestinal tract.","definition_xrefs":["Orphanet:79403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"junctional epidermolysis bullosa with pyloric atresia","secondary_identifiers":["NANDO:2201380","MEDGEN:1810975","DOID:0060733","MESH:C535377","UMLS:C5676875","OMIM:226730","GARD:9694","icd11.foundation:1877890811"],"synonyms":[{"name":"Carmi syndrome","type":"exact"},{"name":"EB-Pa-ACC","type":"related"},{"name":"JEB-PA","type":"exact"},{"name":"JEB-Pa","type":"related"},{"name":"aplasia cutis congenita with gastrointestinal atresia","type":"related"},{"name":"epidermolysis bullosa JUNCTIONALIS with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa junctionalis with pyloric atresia","type":"exact"},{"name":"epidermolysis bullosa with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric atresia","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric atresia and aplasia cutis congenita","type":"related"},{"name":"epidermolysis bullosa, junctional, with pyloric stenosis","type":"exact"},{"name":"junctional epidermolysis bullosa - pyloric atresia","type":"related"},{"name":"junctional epidermolysis bullosa with pyloric atresia","type":"exact"},{"name":"junctional epidermolysis bullosa-pyloric atresia syndrome","type":"exact"}],"termid":"MONDO:0009183","xrefs":{"Monarch":{"xref_id":"0009183"}}}


id: PBO:0035806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_boundary_element_IRC1L_during_vegetative_growth","termid":"PBO:0035806"}


id: GO:0072277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a metanephric glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular capillary formation","termid":"GO:0072104"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature morphogenesis","termid":"GO:0072276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular capillary formation","termid":"GO:0072277"}


id: PBO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AA member 1 pseudogene","termid":"PBO:0061909"}


id: PBO:0109369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4C","termid":"PBO:0109369"}


id: PBO:0075694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRD5A3 antisense RNA 1","termid":"PBO:0075694"}


id: PBO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho3","termid":"PBO:0048216"}


id: PBO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 36","termid":"PBO:0042837"}


id: MONDO:0019840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-pectoro-renal field defect is a very rare association of a Poland anomaly, that is characterized by unilateral absence or hypoplasia of the pectoralis major muscle (most frequently involving the sternocostal head) and a variable degree of ipsilateral hand anomalies (including symbrachydactyly, brachydactyly, absent thumb and hypoplastic fingers), combined with a genito-urinary anomaly. Associated genito-urinary anomalies reported include renal hypoplasia or agenesis, duplex collecting system, ureteropelvic junction obstruction, hypospadias and undescended testicles.","definition_xrefs":["Orphanet:956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic breast hypoplasia/aplasia","termid":"MONDO:0015856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acropectororenal dysplasia","secondary_identifiers":["GARD:511","SCTID:720413004"],"synonyms":[{"name":"acro-pectoro-renal field defect","type":"related"},{"name":"brachydactyly, absent pectoral muscles and agenesis/hypoplasia of kidneys","type":"related"}],"termid":"MONDO:0019840","xrefs":{"Monarch":{"xref_id":"0019840"}}}


id: GO:0071560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["PMID:15451575","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to transforming growth factor beta","termid":"GO:0071559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"cellular response to TGF-beta stimulus","type":"exact"},{"name":"cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:0071560"}


id: GO:1905707
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120038],"is_not":false,"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled proton transport.","definition_xrefs":["PMID:15294286","GOC:TermGenie","GO_REF:0000058","PMID:12809520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled proton transport","termid":"GO:1905706"},{"relation_name":"is_a","term_name":"negative regulation of ATP biosynthetic process","termid":"GO:2001170"},{"relation_name":"negatively_regulates","term_name":"proton motive force-driven mitochondrial ATP synthesis","termid":"GO:0042776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled proton transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905707","terms_by_termid":{"GO:1905707":null}}


id: MONDO:0015299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asherman syndrome","secondary_identifiers":["MedDRA:10022821","GARD:5853","icd11.foundation:2022431339","MedDRA:10053868","NORD:811","Orphanet:137686","UMLS:C0156372","SCTID:48236007","MEDGEN:57629"],"synonyms":[{"name":"Asherman syndrome","type":"exact"},{"name":"Asherman's Syndrome","type":"exact"},{"name":"Asherman's syndrome","type":"related"},{"name":"intrauterine adhesions","type":"exact"},{"name":"intrauterine synechiae","type":"exact"},{"name":"uterine synechiae","type":"related"}],"termid":"MONDO:0015299","xrefs":{"Monarch":{"xref_id":"0015299"}}}


id: GO:0010707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of globosides that begins with the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group.","definition_xrefs":["GOC:bf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"globoside biosynthetic process","termid":"GO:0001576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"globoside biosynthetic process via lactosylceramide","synonyms":[{"name":"biosynthesis of lactosylceramide precursor to globoside","type":"related"},{"name":"globoside biosynthesis via lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide biosynthesis leading to globoside","type":"related"},{"name":"lactosylceramide biosynthetic process leading to globoside","type":"related"}],"termid":"GO:0010707"}


id: PBO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 135","termid":"PBO:0075085"}


id: GO:0032524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients out of a cell or organelle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient export (obsolete GO:0032524)","synonyms":[{"name":"nutrient export","type":"exact"}],"termid":"GO:0032524"}


id: FYPO:0009102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain less cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"interphase microtubules present in decreased numbers","synonyms":[{"name":"decreased number of interphase microtubules","type":"exact"},{"name":"fewer microtubules present during mitotic interphase","type":"exact"}],"termid":"FYPO:0009102"}


id: GO:1903520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GO_REF:0000058","GOC:dph","PMID:23164222","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"negatively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland involution","synonyms":[{"name":"down regulation of mammary gland involution","type":"exact"},{"name":"down-regulation of mammary gland involution","type":"exact"},{"name":"downregulation of mammary gland involution","type":"exact"},{"name":"inhibition of mammary gland involution","type":"narrow"}],"termid":"GO:1903520"}


id: MONDO:0030300
data:
  {"annotated_genes":["SJAG_02611","SJAG_01322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88395,88396],"is_not":false,"summary":null,"term":"MONDO:0030300"}]},"cv_name":"mondo","definition":"A dilated cardiomyopathy that is characterized by neonatal onset of severe cardiomyopathy, with rapid progression to cardiac decompensation and death unless the patient undergoes heart transplantation and that has material basis in homozygous or compound heterozygous mutation in the RPL3L gene on chromosome 16p13.","definition_xrefs":["DOID:0081160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01322":null,"SJAG_02611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2D","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1782612","OMIM:619371","UMLS:C5543535"],"synonyms":[{"name":"CMD2D","type":"exact"},{"name":"cardiomyopathy, dilated, 2D","type":"exact"}],"termid":"MONDO:0030300","terms_by_termid":{"MONDO:0030300":null},"xrefs":{"Monarch":{"xref_id":"0030300"}}}


id: FYPO:0003191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to microtubules does not occur, and the protein is instead visible in one or a few foci or dots in the cytoplasm, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"protein localization to microtubule abolished during interphase, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"},{"name":"protein localization to microtubule abolished during mitotic interphase, with protein mislocalized to cytoplasmic foci","type":"exact"}],"termid":"FYPO:0003191"}


id: GO:0016112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyterpenoid metabolic process","termid":"GO:0016111"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyterpenoid biosynthetic process","synonyms":[{"name":"polyterpene biosynthesis","type":"narrow"},{"name":"polyterpene biosynthetic process","type":"narrow"},{"name":"polyterpenoid anabolism","type":"exact"},{"name":"polyterpenoid biosynthesis","type":"exact"},{"name":"polyterpenoid formation","type":"exact"},{"name":"polyterpenoid synthesis","type":"exact"}],"termid":"GO:0016112"}


id: MONDO:1012800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arthrogryposis multiplex congenita that occurs in cattle due to a mutation in the AGRN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, cattle","termid":"MONDO:1011474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, AGRN-related, cattle","secondary_identifiers":["OMIA:002135-9913"],"synonyms":[{"name":"BHAC","type":"exact"},{"name":"Bovine Hereditary Arthrogyposis Multiplex Congentia","type":"broad"},{"name":"curly calf syndrome","type":"related"}],"termid":"MONDO:1012800","xrefs":{"Monarch":{"xref_id":"1012800"}}}


id: PBO:0032720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spherical_cell_with_cell_lysis","termid":"PBO:0032720"}


id: MONDO:0017908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperekplexia (obsolete MONDO:0017908)","termid":"MONDO:0017908","xrefs":{"Monarch":{"xref_id":"0017908"}}}


id: PBO:0059473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3","termid":"PBO:0059473"}


id: GO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["PMID:11911826","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"positively_regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"activation of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"positive regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"positive regulation of leucocyte mediated cytotoxicity","type":"exact"},{"name":"stimulation of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"up regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"up-regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"upregulation of leukocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001912"}


id: MONDO:0012515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile open angle glaucoma","termid":"MONDO:0020367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, M","secondary_identifiers":["GARD:18230","OMIM:610535","MEDGEN:400584","UMLS:C1864653","MESH:C566436"],"synonyms":[{"name":"GLC1M","type":"exact"},{"name":"JOAG1M","type":"exact"},{"name":"glaucoma 1, open angle, M","type":"exact"}],"termid":"MONDO:0012515","xrefs":{"Monarch":{"xref_id":"0012515"}}}


id: GO:0002289
data:
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id: GO:0035132
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id: PBO:0041894
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id: FYPO:0001616
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id: MONDO:0013827
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id: PBO:0085180
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id: PBO:0081424
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id: PBO:0091910
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id: GO:2000781
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id: MONDO:0004836
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id: GO:2000453
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id: MONDO:0002051
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id: PBO:0055812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1 pseudogene 1","termid":"PBO:0055812"}


id: PBO:0059987
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 7","termid":"PBO:0059987"}


id: PBO:0091025
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane pantothenate transmembrane transporter Liz1","termid":"PBO:0091025"}


id: MONDO:0014766
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id: GO:1905505
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of motile cilium assembly.","definition_xrefs":["GOC:cilia","GOC:TermGenie","PMID:25294941","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cilium assembly","termid":"GO:0045724"},{"relation_name":"is_a","term_name":"regulation of motile cilium assembly","termid":"GO:1905503"},{"relation_name":"positively_regulates","term_name":"motile cilium assembly","termid":"GO:0044458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of motile cilium assembly","synonyms":[{"name":"activation of motile primary cilia assembly","type":"narrow"},{"name":"activation of motile primary cilia formation","type":"narrow"},{"name":"activation of motile primary cilium assembly","type":"narrow"},{"name":"activation of motile primary cilium formation","type":"narrow"},{"name":"activation of nodal cilium assembly","type":"related"},{"name":"activation of nodal cilium formation","type":"related"},{"name":"positive regulation of motile primary cilia assembly","type":"related"},{"name":"positive regulation of motile primary cilia formation","type":"related"},{"name":"positive regulation of motile primary cilium assembly","type":"related"},{"name":"positive regulation of motile primary cilium formation","type":"related"},{"name":"positive regulation of nodal cilium assembly","type":"related"},{"name":"positive regulation of nodal cilium formation","type":"related"},{"name":"up regulation of motile primary cilia assembly","type":"related"},{"name":"up regulation of motile primary cilia formation","type":"related"},{"name":"up regulation of motile primary cilium assembly","type":"related"},{"name":"up regulation of motile primary cilium formation","type":"related"},{"name":"up regulation of nodal cilium assembly","type":"related"},{"name":"up regulation of nodal cilium formation","type":"related"},{"name":"up-regulation of motile primary cilia assembly","type":"related"},{"name":"up-regulation of motile primary cilia formation","type":"related"},{"name":"up-regulation of motile primary cilium assembly","type":"related"},{"name":"up-regulation of motile primary cilium formation","type":"related"},{"name":"up-regulation of nodal cilium assembly","type":"related"},{"name":"up-regulation of nodal cilium formation","type":"related"},{"name":"upregulation of motile primary cilia assembly","type":"related"},{"name":"upregulation of motile primary cilia formation","type":"related"},{"name":"upregulation of motile primary cilium assembly","type":"related"},{"name":"upregulation of motile primary cilium formation","type":"related"},{"name":"upregulation of nodal cilium assembly","type":"related"},{"name":"upregulation of nodal cilium formation","type":"related"}],"termid":"GO:1905505"}


id: GO:1903300
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(phosphorylating)","type":"exact"},{"name":"downregulation of hexokinase D","type":"related"},{"name":"downregulation of hexokinase activity","type":"exact"},{"name":"downregulation of hexokinase type I activity","type":"narrow"},{"name":"downregulation of hexokinase type II activity","type":"narrow"},{"name":"downregulation of hexokinase type III activity","type":"narrow"},{"name":"downregulation of hexokinase type IV","type":"related"},{"name":"downregulation of hexokinase type IV (glucokinase) activity","type":"narrow"},{"name":"downregulation of hexokinase type IV glucokinase activity","type":"exact"},{"name":"inhibition of ATP-dependent hexokinase activity","type":"narrow"},{"name":"inhibition of ATP:D-hexose 6-phosphotransferase activity","type":"narrow"},{"name":"inhibition of glucose ATP phosphotransferase activity","type":"narrow"},{"name":"inhibition of hexokinase (phosphorylating)","type":"narrow"},{"name":"inhibition of hexokinase D","type":"related"},{"name":"inhibition of 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id: GO:2000582
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id: GO:0048086
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id: GO:0047254
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id: MONDO:0008446
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id: GO:0021868
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a forebrain radial glial cell that gives rise to a radial glial cell and a ventricular zone cell.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","PMID:16226447"],"gene_count":0,"genotype_count":0,"name":"obsolete ventricular zone cell-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021868)","termid":"GO:0021868"}


id: GO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a tyramine by a cell in which the tyramine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine secretion, neurotransmission","termid":"GO:0061532"},{"relation_name":"is_a","term_name":"tyramine secretion","termid":"GO:0061545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"tyramine secretion, neurotransmission","termid":"GO:0061546"}


id: PBO:0063631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 9","termid":"PBO:0063631"}


id: GO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"endocardial cushion formation","termid":"GO:0003272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in endocardial cushion formation","termid":"GO:0003273"}


id: PBO:0087951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF5; functions as both a GTPase-activating protein (GAP) that stimulates the hydrolysis of GTP bound to eIF-2, as part of the 43S preinitiation complex, and as a GDP dissociation inhibitor (GDI) to prevent recycling of eIF2; human ortholog eIF5 complements the yeast null mutant","termid":"PBO:0087951"}


id: GO:0035338
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109450],"is_not":false,"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a long-chain fatty-acyl-CoA any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0055086","GO:0006629"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75876"],"synonyms":[{"name":"long-chain fatty acyl CoA biosynthetic process","type":"exact"},{"name":"long-chain fatty-acyl-CoA anabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"long-chain fatty-acyl-CoA formation","type":"exact"},{"name":"long-chain fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0035338","terms_by_termid":{"GO:0035338":null}}


id: PBO:0079330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17B","termid":"PBO:0079330"}


id: GO:0097750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane tubulation process occurring in an endosome membrane.","definition_xrefs":["PMID:26911690","GOC:bc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"},{"relation_name":"is_a","term_name":"membrane tubulation","termid":"GO:0097749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"endosome membrane tubulation","synonyms":[{"name":"endosomal membrane tubulation","type":"exact"}],"termid":"GO:0097750"}


id: GO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus by host","synonyms":[{"name":"host regulation of antiviral response","type":"exact"},{"name":"regulation by host of antiviral response","type":"exact"},{"name":"regulation of antiviral response by host","type":"related"}],"termid":"GO:0050691"}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: GO:1905424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","PMID:17244647","GOC:bf","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905424)","synonyms":[{"name":"regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron differentiation by regulation of Wnt signaling","type":"related"}],"termid":"GO:1905424"}


id: MONDO:0007333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van der Woude syndrome in which the cause of the disease is a mutation in the IRF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"van der Woude syndrome","termid":"MONDO:0019508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van der Woude syndrome 1","secondary_identifiers":["UMLS:C4551864","OMIM:119300","MEDGEN:1640616"],"synonyms":[{"name":"IRF6 van der Woude syndrome","type":"exact"},{"name":"VAN DER Woude syndrome 1","type":"related"},{"name":"VWS1","type":"related"},{"name":"Van Der Woude syndrome type 1","type":"exact"},{"name":"Vdws","type":"related"},{"name":"cleft lip and/or palate with mucous cysts of Lower lip","type":"related"},{"name":"lip-pit syndrome","type":"related"},{"name":"van der Woude syndrome 1","type":"exact"},{"name":"van der Woude syndrome caused by mutation in IRF6","type":"exact"}],"termid":"MONDO:0007333","xrefs":{"Monarch":{"xref_id":"0007333"}}}


id: GO:0098574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of lysosomal membrane","synonyms":[{"name":"external leaflet of lysosomal membrane","type":"exact"},{"name":"external side of lysosomal membrane","type":"exact"}],"termid":"GO:0098574"}


id: MONDO:0859212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder, nonprogressive, with spasticity and transient opisthotonus","secondary_identifiers":["OMIM:619653","UMLS:C5562040","MEDGEN:1794250"],"termid":"MONDO:0859212","xrefs":{"Monarch":{"xref_id":"0859212"}}}


id: FYPO:0006709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"abolished protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0006709"}


id: GO:0010933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of macrophage tolerance induction","termid":"GO:0010932"},{"relation_name":"positively_regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage tolerance induction","termid":"GO:0010933"}


id: PBO:0029731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029731"}


id: GO:1901363
data:
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id: MONDO:0008045
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id: FYPO:0001749
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id: GO:0060731
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process the increases the rate, frequency or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"},{"relation_name":"positively_regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal epithelial structure maintenance","termid":"GO:0060731"}


id: MONDO:0021292
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the body of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric body carcinoma","termid":"MONDO:0003972"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of gastric body","secondary_identifiers":["MEDGEN:87516","NCIT:C4430","SCTID:92549006","UMLS:C0345805"],"synonyms":[{"name":"body of stomach carcinoma in situ","type":"exact"},{"name":"body of stomach in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of body of stomach","type":"exact"},{"name":"carcinoma in situ of the body of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric body","type":"exact"},{"name":"gastric body carcinoma in situ","type":"exact"},{"name":"gastric body carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 body of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric body carcinoma","type":"exact"}],"termid":"MONDO:0021292","xrefs":{"Monarch":{"xref_id":"0021292"}}}


id: PBO:0084765
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase with a role in splicing; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084765"}


id: MONDO:1012315
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital erythropoietic porphyria, non-human animal","termid":"MONDO:1011742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital erythropoietic porphyria, zebu cattle","secondary_identifiers":["OMIA:001175-9915"],"termid":"MONDO:1012315","xrefs":{"Monarch":{"xref_id":"1012315"}}}


id: GO:0050709
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id: MONDO:0010733
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia type 2 (SPG2) is an X-linked leukodystrophy characterized primarily by spastic gait and autonomic dysfunction. When additional central nervous system (CNS) signs, such as intellectual deficit, ataxia, or extrapyramidal signs, are present, the syndrome is referred to as complicated SPG.","definition_xrefs":["Orphanet:99015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 2","secondary_identifiers":["SCTID:723622007","DOID:0110773","UMLS:C1839264","GARD:4923","MEDGEN:374177","OMIM:312920"],"synonyms":[{"name":"PLP1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG2","type":"exact"},{"name":"Sppx2","type":"related"},{"name":"X-linked spastic paraplegia 2","type":"exact"},{"name":"X-linked spastic paraplegia type 2","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in PLP1","type":"exact"},{"name":"hereditary spastic paraplegia type 2","type":"exact"},{"name":"spastic gait type 2","type":"exact"},{"name":"spastic paraparesis type 2","type":"exact"},{"name":"spastic paraplegia 2","type":"related"},{"name":"spastic paraplegia 2, X-linked","type":"related"},{"name":"spastic paraplegia 2, X-linked, X-linked recessive","type":"exact"},{"name":"spastic paraplegia type 2","type":"exact"}],"termid":"MONDO:0010733","xrefs":{"Monarch":{"xref_id":"0010733"}}}


id: FYPO:0002928
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PMID:24081329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: MONDO:0100609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypophosphatasia in which the cause of the disease is an autosomal recessive loss-of-function in the ALPL gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"ALPL-related autosomal recessive hypophosphatasia","termid":"MONDO:0100609","xrefs":{"Monarch":{"xref_id":"0100609"}}}


id: PBO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 2","termid":"PBO:0048593"}


id: PBO:0064639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-platelet basic protein pseudogene 2","termid":"PBO:0064639"}


id: MONDO:0011580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia-hypogonadism syndrome","termid":"MONDO:0008935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar ataxia and hypergonadotropic hypogonadism","secondary_identifiers":["UMLS:C1854064","MESH:C565308","OMIM:605672","MEDGEN:381328","GARD:15384"],"synonyms":[{"name":"cerebellar ataxia and hypergonadotropic hypogonadism","type":"exact"}],"termid":"MONDO:0011580","xrefs":{"Monarch":{"xref_id":"0011580"}}}


id: PBO:0090272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane siderophore-iron transmembrane transporter Str2","termid":"PBO:0090272"}


id: GO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the configuration of the constituent parts of an anatomical structure. This process pertains to the physical shaping of a rudimentary structure. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure arrangement","synonyms":[{"name":"anatomical structure organization","type":"broad"},{"name":"anatomical structure structural organization","type":"exact"},{"name":"organization of an anatomical structure","type":"exact"},{"name":"structural organization","type":"exact"}],"termid":"GO:0048532"}


id: GO:1990956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a fibroblast guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph","PMID:8760137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast chemotaxis","termid":"GO:1990956"}


id: PR:Q9UTI9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC15E1.02c gene.","definition_xrefs":["UniProtKB:Q9UTI9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0591 membrane protein C15E1.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.02c","synonyms":[{"name":"Spom972h-SPAC15E1.02c","type":"exact"}],"termid":"PR:Q9UTI9"}


id: GO:0007393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell within the dorsal ectoderm becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["PMID:12147138","GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate determination","termid":"GO:0035028"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate determination","termid":"GO:0007393"}


id: PBO:0067650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 825, pseudogene","termid":"PBO:0067650"}


id: GO:0047899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + NADP+ = CO2 + NADPH.","definition_xrefs":["RHEA:12000","EC:1.17.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:FORMATE-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R00134"],"synonyms":[{"name":"NADP-dependent formate dehydrogenase activity","type":"related"},{"name":"formate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047899"}


id: MONDO:0015822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neutropenia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired neutropenia (obsolete MONDO:0015822)","secondary_identifiers":["Orphanet:178996","icd11.foundation:348671706"],"synonyms":[{"name":"acquired neutropenia","type":"exact"},{"name":"immunologic neutropenia","type":"exact"}],"termid":"MONDO:0015822","xrefs":{"Monarch":{"xref_id":"0015822"}}}


id: GO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus (obsolete GO:0042993)","synonyms":[{"name":"activation of transcription factor import into nucleus","type":"narrow"},{"name":"positive regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"positive regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of transcription factor-nucleus import","type":"exact"},{"name":"stimulation of transcription factor import into nucleus","type":"narrow"},{"name":"up regulation of transcription factor import into nucleus","type":"exact"},{"name":"up-regulation of transcription factor import into nucleus","type":"exact"},{"name":"upregulation of transcription factor import into nucleus","type":"exact"}],"termid":"GO:0042993"}


id: MONDO:0017385
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"}]},"cv_name":"mondo","definition":"A very rare severe form of epilepsy with poor prognosis that usually begins within a few weeks of birth. The seizure activity can appear in multiple locations in the brain or migrate from one region to another during an episode. It results in severe developmental delay.","definition_xrefs":["NCIT:C125387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"malignant migrating partial seizures of infancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:293181","NANDO:1200595","GARD:12919","MEDGEN:782160","UMLS:C3494976"],"synonyms":[{"name":"MMPEI","type":"exact"},{"name":"MMPSI","type":"exact"},{"name":"MPEI","type":"exact"},{"name":"MPSI","type":"broad"},{"name":"malignant migrating Partial seizures in infancy","type":"exact"},{"name":"malignant migrating partial epilepsy of infancy","type":"exact"},{"name":"migrating Partial seizures in infancy","type":"exact"},{"name":"migrating partial epilepsy of infancy","type":"exact"},{"name":"migrating partial seizures of infancy","type":"exact"}],"termid":"MONDO:0017385","terms_by_termid":{"MONDO:0013389":null},"xrefs":{"Monarch":{"xref_id":"0017385"}}}


id: PR:Q9URT4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ams2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A multicopy suppressor protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC290.04","synonyms":[{"name":"Spom972h-ams2","type":"exact"}],"termid":"PR:Q9URT4"}


id: PBO:0058020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3945 host gene","termid":"PBO:0058020"}


id: PBO:0069617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 894, pseudogene","termid":"PBO:0069617"}


id: GO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the use of stored sperm from the first-mating male is inhibited by the seminal fluid of subsequently mating males.","definition_xrefs":["PMID:10440373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm competition","termid":"GO:0046692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm incapacitation","termid":"GO:0046694"}


id: GO:0051258
data:
  {"annotated_genes":["SJAG_01993","SJAG_03540","SJAG_00856","SJAG_02761","SJAG_01215","SJAG_01894","SJAG_02700","SJAG_04100","SJAG_02245","SJAG_02737","SJAG_07018","SJAG_03086","SJAG_02566","SJAG_02624","SJAG_02886","SJAG_04479","SJAG_00279","SJAG_01756","SJAG_01268","SJAG_03835","SJAG_00521","SJAG_00677","SJAG_04982","SJAG_02609","SJAG_01384"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95719,100763,67872,99647,66029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[118970],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[80930,81987,77320,94217],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[72911,73341,80815],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[102022,102927,102318,108421,118975,119220],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[120713,102928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[81240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[81230,68635,78514,79158,69535],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01756":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03086":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"protein polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer biosynthesis","type":"exact"},{"name":"protein polymer biosynthetic process","type":"exact"},{"name":"protein polymer formation","type":"exact"}],"termid":"GO:0051258","terms_by_termid":{"GO:0007020":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0046785":null,"GO:0051016":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:0062244
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume surrounded by the inner membrane of a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory lumen","synonyms":[{"name":"lumen of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062244"}


id: PBO:0084219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase); dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions","termid":"PBO:0084219"}


id: PBO:0117187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRAM1 antisense RNA 1","termid":"PBO:0117187"}


id: PBO:0056880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10-NBL1 readthrough","termid":"PBO:0056880"}


id: PBO:0057755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1914","termid":"PBO:0057755"}


id: FYPO:0008191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at a natural  replication barrier is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork arrest","termid":"FYPO:0008191"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["EBIBS:GAR","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: MOD:01874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carboxy-L-valine.","definition_xrefs":["PubMed:8312270","PubMed:18688235","PubMed:4647257","PubMed:4593770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-valine","synonyms":[{"name":"(S)-2-carboxyamino-propanoic acid","type":"exact"},{"name":"2-carbamic-propanoic acid","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:01874"}


id: GO:1900598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of demethylkotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"demethylkotanin metabolic process","termid":"GO:1900597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"demethylkotanin catabolic process","synonyms":[{"name":"demethylkotanin breakdown","type":"exact"},{"name":"demethylkotanin catabolism","type":"exact"},{"name":"demethylkotanin degradation","type":"exact"}],"termid":"GO:1900598"}


id: MONDO:0021427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"},{"relation_name":"is_a","term_name":"carcinoma of lip","termid":"MONDO:0021333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of lip","secondary_identifiers":["SCTID:255071008","GARD:17933","MEDGEN:79099","NCIT:C4042","Orphanet:502366","UMLS:C0280302","icd11.foundation:1635251327"],"synonyms":[{"name":"lip scc","type":"exact"},{"name":"lip squamous cell carcinoma","type":"exact"},{"name":"scc of Lip","type":"exact"},{"name":"scc of the Lip","type":"exact"},{"name":"squamous cell carcinoma of the Lip","type":"exact"}],"termid":"MONDO:0021427","xrefs":{"Monarch":{"xref_id":"0021427"}}}


id: GO:2001054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"negative regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001054"}


id: PBO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog1 (predicted)","termid":"PBO:0002632"}


id: GO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XII trimer","termid":"GO:0005595"}


id: MONDO:0017615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic epileptic syndrome characterized by the occurrence of afebrile repeated seizures in healthy infants, between the third and eighth month of life.","definition_xrefs":["Orphanet:306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign partial infantile seizures","termid":"MONDO:0015642"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign familial infantile epilepsy","secondary_identifiers":["MEDGEN:1806836","icd11.foundation:1944845279","DOID:0060169","GARD:857","ICD9:V17.2","SCTID:230410004","OMIMPS:601764","UMLS:C5575231"],"synonyms":[{"name":"BFIC","type":"exact"},{"name":"BFIE","type":"exact"},{"name":"BFIS","type":"exact"},{"name":"benign familial infantile convulsion","type":"exact"},{"name":"benign familial infantile convulsions","type":"exact"},{"name":"benign familial infantile seizures","type":"exact"},{"name":"seizures, benign familial infantile","type":"exact"}],"termid":"MONDO:0017615","xrefs":{"Monarch":{"xref_id":"0017615"}}}


id: PBO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor (predicted)","termid":"PBO:0005436"}


id: PATO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000098 insecticide sensitivity (obsolete PATO:0000098)","termid":"PATO:0000098"}


id: GO:0005198
data:
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id: GO:0050001
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id: PBO:0000803
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id: GO:0102481
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id: PBO:0005709
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id: FYPO:0007919
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id: MONDO:0014282
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id: GO:0009011
data:
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id: FYPO:0005971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which proton transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal proton transport","synonyms":[{"name":"abnormal H+ ion transport","type":"exact"},{"name":"abnormal hydrogen ion transport","type":"exact"},{"name":"abnormal proton transmembrane transport","type":"exact"}],"termid":"FYPO:0005971"}


id: GO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier.","definition_xrefs":["PMID:14715942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"myelin assembly","termid":"GO:0032288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"paranodal junction assembly","synonyms":[{"name":"paranodal axoglial junction formation","type":"exact"},{"name":"paranodal junction biosynthesis","type":"exact"},{"name":"paranodal junction formation","type":"exact"}],"termid":"GO:0030913"}


id: PBO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 1B","termid":"PBO:0047601"}


id: PBO:0028129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trapoxin_A","termid":"PBO:0028129"}


id: GO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA in a mitochondrion, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylalanyl-tRNA aminoacylation","termid":"GO:0006432"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0010467","GO:0006399","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA aminoacylation","termid":"GO:0070156"}


id: GO:0072054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal outer medulla over time, from its formation to the mature structure. The renal outer medulla is the region of the kidney that lies between the renal cortex and the renal inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal outer medulla development","synonyms":[{"name":"outer renal medulla development","type":"exact"}],"termid":"GO:0072054"}


id: PBO:0057425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548y","termid":"PBO:0057425"}


id: PBO:0058541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6086","termid":"PBO:0058541"}


id: MONDO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the vagina. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagina sarcoma","termid":"MONDO:0002140"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vagina leiomyosarcoma","secondary_identifiers":["UMLS:C1336940","MEDGEN:277860","DOID:5283"],"synonyms":[{"name":"leiomyosarcoma of the vagina","type":"exact"},{"name":"leiomyosarcoma of vagina","type":"exact"},{"name":"vagina leiomyosarcoma","type":"exact"},{"name":"vaginal leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003369","xrefs":{"Monarch":{"xref_id":"0003369"}}}


id: PBO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Cha4 (predicted)","termid":"PBO:0003055"}


id: PBO:0029255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_DNA_replication","termid":"PBO:0029255"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: PBO:0059625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 1","termid":"PBO:0059625"}


id: GO:0004774
data:
  {"annotated_genes":["SJAG_03813","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77105,73519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + CoA + nucleotide triphosphate = nucleotide diphosphate + phosphate + succinyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"succinate-CoA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004774","terms_by_termid":{"GO:0004775":null}}


id: PBO:0114087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit H /peripheral stalk subunit F6, Atp14","termid":"PBO:0114087"}


id: MONDO:0009701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, granulovacuolar lobular, with electrical myotonia","secondary_identifiers":["MEDGEN:338114","UMLS:C1850745","MESH:C564974","OMIM:254950"],"synonyms":[{"name":"myopathy, granulovacuolar lobular, with electrical myotonia","type":"exact"}],"termid":"MONDO:0009701","xrefs":{"Monarch":{"xref_id":"0009701"}}}


id: GO:1901828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zeaxanthin bis(beta-D-glucoside).","definition_xrefs":["MetaCyc:PWY-6288","UniPathway:UPA00798","GOC:TermGenie","GOC:yaf","PMID:20075616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"zeaxanthin bis(beta-D-glucoside) metabolic process","synonyms":[{"name":"zeaxanthin bis(beta-D-glucoside) metabolism","type":"exact"},{"name":"zeaxanthin diglucoside metabolism","type":"exact"}],"termid":"GO:1901828"}


id: FYPO:0007778
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121631],"is_not":false,"summary":null,"term":"FYPO:0007778"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae form fewer branched filaments than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02013":null},"genotype_count":1,"genotypes_by_uniquename":{"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"decreased hyphal branching","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013"],"single_locus_genotype_uniquenames":["pyp1delta"],"synonyms":[{"name":"decreased number of branched filaments","type":"exact"}],"termid":"FYPO:0007778","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007778":null,"FYPO_EXT:0000001":null}}


id: MONDO:0018512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of epithelial tumor of colon that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of colon (obsolete MONDO:0018512)","secondary_identifiers":["Orphanet:423991"],"synonyms":[{"name":"rare epithelial tumor of colon","type":"exact"}],"termid":"MONDO:0018512","xrefs":{"Monarch":{"xref_id":"0018512"}}}


id: FYPO:0001726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-cysteine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular cysteine level","synonyms":[{"name":"normal cellular L-cysteine level","type":"exact"},{"name":"normal cellular cysteine level during mitotic cell cycle","type":"related"},{"name":"normal cellular cysteine level during vegetative growth","type":"exact"},{"name":"normal level of cysteine in cell","type":"exact"}],"termid":"FYPO:0001726"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: PBO:0109130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 2","termid":"PBO:0109130"}


id: PBO:0091645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase","termid":"PBO:0091645"}


id: FYPO:0007585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling begins earlier than normal. Signaling may begin in interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19736319","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"premature septation initiation network signaling","synonyms":[{"name":"advanced septation initiation network signaling","type":"exact"},{"name":"premature SIN signaling","type":"exact"},{"name":"premature septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"premature septation initiation network signaling during vegetative growth","type":"exact"},{"name":"premature septation initiation network signalling","type":"exact"},{"name":"premature septation initiation signaling","type":"exact"}],"termid":"FYPO:0007585"}


id: GO:0017043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A polypeptide hormone which stimulates the adrenal cortex to synthesize and secrete glucocorticoid hormones.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenocorticotropin (obsolete GO:0017043)","synonyms":[{"name":"adrenocorticotropin","type":"exact"},{"name":"corticotropin","type":"broad"}],"termid":"GO:0017043"}


id: GO:0072653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-omega due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interferon-omega production","secondary_identifiers":["GO:0072654"],"synonyms":[{"name":"IFN-omega production","type":"exact"},{"name":"IFNW production","type":"exact"},{"name":"interferon-omega secretion","type":"narrow"}],"termid":"GO:0072653"}


id: PBO:0043295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 12 member B","termid":"PBO:0043295"}


id: GO:1901020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transmembrane transporter activity","synonyms":[{"name":"down regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"down-regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"downregulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"inhibition of calcium ion transmembrane transporter activity","type":"narrow"}],"termid":"GO:1901020"}


id: GO:0075309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in the symbiont's size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth or development of symbiont on or near host surface (obsolete GO:0075309)","synonyms":[{"name":"negative regulation of growth or development of symbiont on or near host surface","type":"exact"}],"termid":"GO:0075309"}


id: FYECO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Arginine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine absent","termid":"FYECO:0000255"}


id: MOD:00815
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00151. Remap to MOD:00151.","definition_xrefs":["PubMed:9428520","PubMed:14527393","PubMed:7878465"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00815 molybdopterin (obsolete MOD:00815)","termid":"MOD:00815"}


id: PBO:0029072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0029072"}


id: MONDO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder affecting the sclera. Examples include inflammatory processes (e.g., scleritis and episcleritis), and degenerative processes. Primary tumors of the sclera are extremely rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleral disorder","secondary_identifiers":["SCTID:33064008","DOID:11343","ICD9:379.19","UMLS:C0036412","NCIT:C79717","MESH:D015422","MEDGEN:11345"],"synonyms":[{"name":"disease of sclera","type":"exact"},{"name":"disease or disorder of sclera","type":"exact"},{"name":"disorder of sclera","type":"exact"},{"name":"sclera disease","type":"exact"},{"name":"sclera disease or disorder","type":"exact"},{"name":"sclera disorder","type":"exact"},{"name":"scleral disorder","type":"exact"}],"termid":"MONDO:0001269","xrefs":{"Monarch":{"xref_id":"0001269"}}}


id: GO:1990230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of an iron-sulfur (Fe-S) cluster from one compound (donor) to another (acceptor), which may be a target protein or another Fe-S assembly complex. In humans, it consists of HSPA9, HSCB, GLRX5, ABCB7 and GFER.","definition_xrefs":["GOC:bhm","PMID:19810706","PMID:34660592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"iron-sulfur cluster transfer complex","synonyms":[{"name":"Fe-S cluster transfer complex","type":"exact"},{"name":"IscA complex","type":"narrow"},{"name":"SufA complex","type":"narrow"},{"name":"SufA dimer","type":"narrow"}],"termid":"GO:1990230"}


id: MONDO:0003768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cervical mucinous adenocarcinoma characterized by the presence of signet ring cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell variant cervical mucinous adenocarcinoma","secondary_identifiers":["MEDGEN:273126","NCIT:C40205","ONCOTREE:SCEMU","DOID:6101","UMLS:C1516424"],"synonyms":[{"name":"cervical mucinous adenocarcinoma, signet Ring cell type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, signet Ring cell variant","type":"exact"},{"name":"signet ring mucinous carcinoma","type":"related"}],"termid":"MONDO:0003768","xrefs":{"Monarch":{"xref_id":"0003768"}}}


id: PBO:0119271
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP2","termid":"PBO:0119271"}


id: GO:0008289
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