# terms

id: PBO:0058419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4788","termid":"PBO:0058419"}


id: PBO:0049624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 27","termid":"PBO:0049624"}


id: PBO:0052490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 4","termid":"PBO:0052490"}


id: FYPO:0000654
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[121258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a catalytic activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_02796":null},"genotype_count":2,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"catalytic activity phenotype","references_by_uniquename":{"PMID:31956022":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01458","SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","acb1delta"],"synonyms":[{"name":"enzymatic activity phenotype","type":"exact"},{"name":"fission yeast catalytic activity phenotype","type":"exact"}],"termid":"FYPO:0000654","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0000719":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: FYPO:0006009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cables than normal during cytokinesis.","definition_xrefs":["PMID:26941334","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cables present in decreased numbers","termid":"FYPO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"actin cables present in decreased numbers during cytokinesis","synonyms":[{"name":"actin cables present in decreased numbers during cytokinesis during mitotic cell cycle","type":"related"},{"name":"actin cables present in decreased numbers during cytokinesis during vegetative growth","type":"exact"},{"name":"actin cables present in reduced numbers during cytokinesis","type":"exact"},{"name":"decreased level of actin cables during cytokinesis","type":"related"},{"name":"fewer actin cables present during cytokinesis","type":"exact"},{"name":"formin-nucleated actin cables present in decreased numbers during cytokinesis","type":"exact"}],"termid":"FYPO:0006009"}


id: PATO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000134 absolute_angle (obsolete PATO:0000134)","termid":"PATO:0000134"}


id: SO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primary transcript region bordering trans-splice junction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_site","synonyms":[{"name":"trans splice site","type":"exact"}],"termid":"SO:0001420"}


id: PBO:0073420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like","termid":"PBO:0073420"}


id: GO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving purine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleobase metabolic process","synonyms":[{"name":"down regulation of purine base metabolic process","type":"exact"},{"name":"down-regulation of purine base metabolic process","type":"exact"},{"name":"downregulation of purine base metabolic process","type":"exact"},{"name":"inhibition of purine base metabolic process","type":"narrow"},{"name":"negative regulation of purine base metabolic process","type":"exact"},{"name":"negative regulation of purine base metabolism","type":"exact"}],"termid":"GO:0045982"}


id: GO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"macrophage differentiation","termid":"GO:0030225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage differentiation","termid":"GO:0045649"}


id: PBO:0043820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase O","termid":"PBO:0043820"}


id: PBO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2 (predicted)","termid":"PBO:0005857"}


id: PBO:0062135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 2 pseudogene","termid":"PBO:0062135"}


id: MONDO:0012293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the PCDH15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 23","secondary_identifiers":["MESH:C563705","OMIM:609533","UMLS:C1836027","GARD:22613","DOID:0110481","MEDGEN:332110"],"synonyms":[{"name":"DFNB23","type":"narrow"},{"name":"PCDH15 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 23","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 23","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in PCDH15","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 23","type":"narrow"},{"name":"deafness, autosomal recessive 23","type":"narrow"},{"name":"deafness, autosomal recessive type 23","type":"narrow"}],"termid":"MONDO:0012293","xrefs":{"Monarch":{"xref_id":"0012293"}}}


id: GO:0044120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in a host vacuole. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host vacuole (obsolete GO:0044120)","synonyms":[{"name":"development of symbiont in host organelle","type":"broad"}],"termid":"GO:0044120"}


id: MONDO:0800106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mental disorder that includes conduct disorder (CD), oppositional defiant disorder (ODD), and attention Deficit Hyperactivity Disorder (ADHD). Features may include frequent aggression, deceitfulness, and defiance, and often persist through the lifespan.","definition_xrefs":["PMID:28577605","PMID:24048954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive behavior disorder","secondary_identifiers":["MEDGEN:41619","NCIT:C99753","UMLS:C0012734"],"synonyms":[{"name":"disruptive disorder","type":"exact"}],"termid":"MONDO:0800106","xrefs":{"Monarch":{"xref_id":"0800106"}}}


id: GO:0044595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-decaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-decaprenyl-4-hydroxy-5-methoxybenzoate.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete decaprenyldihydroxybenzoate methyltransferase activity (obsolete GO:0044595)","termid":"GO:0044595"}


id: PBO:0082403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the mitochondrial processing protease (MPP); essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins","termid":"PBO:0082403"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: MONDO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of retrobulbar neuritis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"retrobulbar neuritis","termid":"MONDO:0024335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute retrobulbar neuritis","secondary_identifiers":["SCTID:51604006","UMLS:C0155301","DOID:14155","ICD9:377.32","MEDGEN:509901"],"synonyms":[{"name":"retrobulbar neuritis (acute)","type":"exact"},{"name":"retrobulbar neuritis, acute","type":"exact"}],"termid":"MONDO:0001895","xrefs":{"Monarch":{"xref_id":"0001895"}}}


id: FYPO:0001368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"},{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring assembly","synonyms":[{"name":"normal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal actomyosin contractile ring formation","type":"related"},{"name":"normal contractile ring assembly","type":"exact"},{"name":"normal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"normal cytokinetic contractile ring assembly","type":"exact"},{"name":"normal cytokinetic ring assembly","type":"related"},{"name":"normal cytokinetic ring formation","type":"related"},{"name":"normal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0001368"}


id: PBO:0004817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19","termid":"PBO:0004817"}


id: MONDO:0800274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 5","secondary_identifiers":["MEDGEN:369911","UMLS:C1969031"],"synonyms":[{"name":"AIS5","type":"exact"}],"termid":"MONDO:0800274","xrefs":{"Monarch":{"xref_id":"0800274"}}}


id: PBO:0073023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2 sterol binding domain containing 1","termid":"PBO:0073023"}


id: PBO:0034762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain Clc1","termid":"PBO:0034762"}


id: MONDO:0017472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"patella aplasia/hypoplasia","termid":"MONDO:0008205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"patella aplasia/hypoplasia, unilateral","secondary_identifiers":["Orphanet:295038"],"termid":"MONDO:0017472","xrefs":{"Monarch":{"xref_id":"0017472"}}}


id: MONDO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Takotsubo cardiomyopathy (TC) is a recently described acute cardiac syndrome that mimics acute myocardial infarction and is characterized by ischemic chest symptoms, an elevated ST segment on electrocardiogram, and elevated levels of cardiac disease markers.","definition_xrefs":["Orphanet:66529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Tako-tsubo cardiomyopathy","secondary_identifiers":["MESH:D054549","EFO:1002000","NORD:2006","SCTID:441541008","UMLS:C1739395","NCIT:C85181","icd11.foundation:478139552","ICD9:429.83","GARD:9400","MEDGEN:366029"],"synonyms":[{"name":"ASC","type":"related"},{"name":"Tako tsubo syndrome","type":"related"},{"name":"Tako-Tsubo syndrome","type":"exact"},{"name":"Takotsubo Cardiomyopathy","type":"exact"},{"name":"Takotsubo cardiomyopathy","type":"exact"},{"name":"Takotsubo syndrome","type":"exact"},{"name":"acute stress cardiomyopathy","type":"related"},{"name":"ampulla cardiomyopathy","type":"exact"},{"name":"apical ballooning syndrome","type":"exact"},{"name":"ballooning cardiomyopathy","type":"exact"},{"name":"broken heart syndrome","type":"exact"},{"name":"broken-heart syndrome","type":"related"},{"name":"left ventricular transient apical ballooning","type":"related"},{"name":"stress cardiomyopathy","type":"exact"},{"name":"stress-induced cardiomyopathy","type":"related"},{"name":"transient antero-apical dyskinesia","type":"related"},{"name":"transient left ventricular apical ballooning syndrome","type":"exact"}],"termid":"MONDO:0019018","xrefs":{"Monarch":{"xref_id":"0019018"}}}


id: SO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons TCN (TCT, TCC, TCA, TCG), AGT and AGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine","synonyms":[{"name":"S","type":"exact"},{"name":"Ser","type":"exact"}],"termid":"SO:0001444"}


id: PBO:0067393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 498, pseudogene","termid":"PBO:0067393"}


id: MONDO:0001493
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88481,88480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Heart disease which occurs as a result of a primary pulmonary disease. Cor pulmonale most often manifests as right ventricular hypertrophy; it can also lead to right ventricular failure.","definition_xrefs":["NCIT:C34478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cor pulmonale","termid":"MONDO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic pulmonary heart disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:87837008","UMLS:C0238074","MEDGEN:116042","ICD9:416.8","NANDO:2200299","DOID:12326","ICD9:416.9"],"synonyms":[{"name":"Cor pulmonale","type":"broad"}],"termid":"MONDO:0001493","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0001493"}}}


id: PBO:0081825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF747 divergent transcript","termid":"PBO:0081825"}


id: GO:0042140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form small, electron dense structures in association with meiotic chromosomes during pachytene. Involved in the catalysis crossing over.","definition_xrefs":["PMID:9334324","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination nodule assembly","termid":"GO:0007146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006281","GO:0007049","GO:0006259","GO:0065003","GO:0044085","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"late meiotic recombination nodule assembly","termid":"GO:0042140"}


id: PBO:0063389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6","termid":"PBO:0063389"}


id: PBO:0054082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1432","termid":"PBO:0054082"}


id: PBO:0054655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2060","termid":"PBO:0054655"}


id: PBO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030925"}


id: GO:1903368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of foraging behavior.","definition_xrefs":["GO_REF:0000058","PMID:8677262","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of foraging behavior","termid":"GO:1903368"}


id: PATO:0000957
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality which obtains by virtue of the ability of the bearer to absorb visible light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opacity","termid":"PATO:0000957"}


id: MONDO:0013169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"5p13 microduplication syndrome is a rare partial autosomal trisomy/tetrasomy characterized by global developmental delay, intellectual disability, autistic behavior, muscular hypotonia, macrocephaly and facial dysmorphism (frontal bossing, short palpebral fissures, low set, dysplastic ears, short or shallow philtrum, high arched or narrow palate, micrognathia). Other associated clinical features include sleep disturbances, seizures, aplasia/hypoplasia of the corpus callosum, skeletal abnormalities (large hands and feet, long fingers and toes, talipes).","definition_xrefs":["Orphanet:329802"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 5","termid":"MONDO:0016942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5p13 duplication syndrome","secondary_identifiers":["MEDGEN:416385","MESH:C567717","UMLS:C2750805","OMIM:613174","GARD:17505","DOID:0060460"],"synonyms":[{"name":"5p13 microduplication syndrome","type":"exact"},{"name":"chromosome 5p13 duplication syndrome","type":"exact"},{"name":"chromosome 5p13 duplication syndrome, isolated cases","type":"exact"},{"name":"dup(5)(p13)","type":"exact"},{"name":"trisomy 5p13","type":"exact"}],"termid":"MONDO:0013169","xrefs":{"Monarch":{"xref_id":"0013169"}}}


id: GO:0031638
data:
  {"annotated_genes":["SJAG_01868","SJAG_04785","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63153,64650,93717],"is_not":false,"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"The proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"zymogen activation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"zymogen activation by proteolytic cleavage","type":"exact"}],"termid":"GO:0031638","terms_by_termid":{"GO:0031638":null}}


id: PBO:0038687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTA2 antisense RNA 1","termid":"PBO:0038687"}


id: PBO:0048312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 23","termid":"PBO:0048312"}


id: PBO:0076963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1","termid":"PBO:0076963"}


id: PBO:0116970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSS3 antisense RNA 1","termid":"PBO:0116970"}


id: PBO:0039532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34C","termid":"PBO:0039532"}


id: GO:0038024
data:
  {"annotated_genes":["SJAG_02120","SJAG_00785","SJAG_03976","SJAG_04569"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115319,115771],"is_not":false,"summary":null,"term":"GO:0038024"},{"annotations":[78760,120856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097020"}]},"cv_name":"molecular_function","definition":"Binding specifically to a substance (cargo) to deliver it to a transport vesicle. Cargo receptors span membranes (for instance the plasma membrane or the endoplasmic reticulum membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit the cargo molecules to nascent vesicles.","definition_xrefs":["PMID:27903609","PMID:15239958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00785":null,"SJAG_02120":null,"SJAG_03976":null,"SJAG_04569":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"cargo receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3000103","Reactome:R-HSA-350168","Reactome:R-HSA-3000122","Reactome:R-HSA-203716","Reactome:R-HSA-3000112","Reactome:R-HSA-3000137","Reactome:R-HSA-9759209","Reactome:R-HSA-9759202"],"synonyms":[{"name":"endocytic receptor activity","type":"narrow"},{"name":"receptor activity","type":"broad"},{"name":"receptor activity involved in receptor-mediated endocytosis","type":"narrow"},{"name":"transport receptor activity","type":"broad"}],"termid":"GO:0038024","terms_by_termid":{"GO:0038024":null,"GO:0097020":null}}


id: PBO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 12","termid":"PBO:0072213"}


id: PBO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 3","termid":"PBO:0052199"}


id: GO:0021632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the optic nerve to attain its fully functional state. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve maturation","synonyms":[{"name":"CN II maturation","type":"exact"}],"termid":"GO:0021632"}


id: GO:0019992
data:
  {"annotated_genes":["SJAG_04479","SJAG_03488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104691,118525],"is_not":false,"summary":null,"term":"GO:0019992"}]},"cv_name":"molecular_function","definition":"Binding to a diacylglycerol, a diester of glycerol and two fatty acids.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"diacylglycerol binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-400015"],"termid":"GO:0019992","terms_by_termid":{"GO:0019992":null}}


id: MONDO:0850157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is characterized by the presence of lymphoblasts that carry a translocation between the TEL gene on chromosome 12 and the AML1 gene on chromosome 21, (p13.2;q22.1). It results in the production of the TEL-AML1 (ETV6-RUNX1) fusion protein.","definition_xrefs":["DOID:0080645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1","termid":"MONDO:0850157","xrefs":{"Monarch":{"xref_id":"0850157"}}}


id: MONDO:0010443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration, X-linked atrophic","secondary_identifiers":["UMLS:C3151784","OMIM:300834","MEDGEN:463134","DOID:0112157","GARD:15268"],"synonyms":[{"name":"macular degeneration, X-linked atrophic","type":"exact"},{"name":"macular degeneration, X-linked atrophic, X-linked recessive","type":"exact"}],"termid":"MONDO:0010443","xrefs":{"Monarch":{"xref_id":"0010443"}}}


id: FYPO:0004987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sunitinib. Cells stop growing (and may die) at a concentration of sunitinib that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sunitinib","synonyms":[{"name":"hypersensitive to sunitinib","type":"exact"},{"name":"sensitive to sunitinib during mitotic cell cycle","type":"related"},{"name":"sensitive to sunitinib during vegetative growth","type":"exact"}],"termid":"FYPO:0004987"}


id: PBO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B","termid":"PBO:0051940"}


id: PR:Q9P7H8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome-associated protein ECM29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component ecm29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.01","secondary_identifiers":["UniProtKB:Q9P7H8"],"synonyms":[{"name":"SPAC1782.01","type":"related"},{"name":"Spom972h-ECM29","type":"exact"}],"termid":"PR:Q9P7H8"}


id: PBO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Mre11_complex_assembly","termid":"PBO:0031216"}


id: PR:000050397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the cut12 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"SPBC649.05","type":"related"},{"name":"Spom-cut12","type":"exact"},{"name":"cell untimely torn protein 12 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cut12","type":"related"},{"name":"stf1","type":"related"}],"termid":"PR:000050397"}


id: GO:0008677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantoate + NADP+ = 2-dehydropantoate + H+ + NADPH.","definition_xrefs":["RHEA:16233","EC:1.1.1.169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantoate 2-reductase activity","secondary_identifiers":["KEGG_REACTION:R02472","MetaCyc:2-DEHYDROPANTOATE-REDUCT-RXN"],"synonyms":[{"name":"(R)-pantoate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketopantoate reductase activity","type":"related"},{"name":"2-ketopantoic acid reductase activity","type":"related"},{"name":"2-oxopantoate reductase activity","type":"related"},{"name":"KPA reductase activity","type":"related"},{"name":"ketopantoate reductase activity","type":"related"},{"name":"ketopantoic acid reductase activity","type":"related"}],"termid":"GO:0008677"}


id: PBO:0081144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP62 zinc finger protein","termid":"PBO:0081144"}


id: MONDO:0958346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by the infiltration of fatty tissue localized in the filum terminale, with abnormal conus shape. The spinal cord is typically attenuated and the limit between its end and the fatty filum is hard to distinguish. There are no additional spinal cord malformation, but it can be associated with vertebral abnormalities, anorectal malformation or other syndromic condition. It is named transitional for its intermediate image between an isolated filum lipoma and a terminal conus region lipoma.","definition_xrefs":["Orphanet:645322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated transitional filum lipoma","secondary_identifiers":["UMLS:C5816722","MEDGEN:1853141"],"termid":"MONDO:0958346","xrefs":{"Monarch":{"xref_id":"0958346"}}}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: PBO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2/M_phase_transition","termid":"PBO:0031801"}


id: GO:0150073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:26670206"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein-glutamine gamma-glutamyltransferase activity (obsolete GO:0150073)","termid":"GO:0150073"}


id: GO:0043871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delta1-piperideine-6-carboxylate + NAD+ + 2 H2O = 2-aminoadipate + NADH + H+. Delta1-piperideine-6-carboxylate is also known as 2,3,4,5-tetrahydropyridine-2-carboxylate.","definition_xrefs":["PMID:16237033"],"gene_count":0,"genotype_count":0,"name":"obsolete delta1-piperideine-6-carboxylate dehydrogenase activity (obsolete GO:0043871)","synonyms":[{"name":"AmaB","type":"related"},{"name":"PIPOX","type":"related"}],"termid":"GO:0043871"}


id: GO:0042209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol catabolic process","secondary_identifiers":["UM-BBD_pathwayID:orc"],"synonyms":[{"name":"orcin catabolic process","type":"exact"},{"name":"orcin catabolism","type":"exact"},{"name":"orcinol breakdown","type":"exact"},{"name":"orcinol catabolism","type":"exact"},{"name":"orcinol degradation","type":"exact"}],"termid":"GO:0042209"}


id: PBO:0067773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 73","termid":"PBO:0067773"}


id: MONDO:0009235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial benign flecked retina is a rare retinal dystrophy characterized by diffuse bilateral white-yellow fleck-like lessions extending to the far periphery of the retina but sparing the foveal region, with asymptomatic clinical phenotype and absence of electrophysiologic deficits.","definition_xrefs":["Orphanet:363989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial benign flecked retina","secondary_identifiers":["MESH:C565564","ICD10CM:H35.5","OMIM:228980","DOID:0111677","MEDGEN:341605","GARD:18651","UMLS:C1856718"],"synonyms":[{"name":"FLECK retina, familial benign","type":"related"},{"name":"FRFB","type":"related"},{"name":"fleck retina, familial benign","type":"exact"}],"termid":"MONDO:0009235","xrefs":{"Monarch":{"xref_id":"0009235"}}}


id: PBO:0058950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKKS centrosomal shuttling protein","termid":"PBO:0058950"}


id: GO:0106011
data:
  {"annotated_genes":["SJAG_04597","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[100354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that regulates the localization of a protein to the medial cortex.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106011","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: PBO:0038730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 25","termid":"PBO:0038730"}


id: MOD:00062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-acetyl-L-tyrosine.","definition_xrefs":["PubMed:475783","PubMed:12175151","PubMed:11999733","PubMed:14730666","RESID:AA0053","PubMed:11857757","PubMed:15350136","PubMed:2506074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-tyrosine","synonyms":[{"name":"(2S)-2-acetamido-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylamino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"AcTyr","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetyltyrosine","type":"exact"},{"name":"N-acetyl-L-tyrosine","type":"exact"},{"name":"N-acetylated L-tyrosine","type":"exact"},{"name":"N-acetyltyrosine","type":"exact"}],"termid":"MOD:00062"}


id: MONDO:1011434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypokalaemic periodic paralysis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder, non-human animal","termid":"MONDO:1011338"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypokalaemic periodic paralysis, non-human animal","secondary_identifiers":["OMIA:001759"],"termid":"MONDO:1011434","xrefs":{"Monarch":{"xref_id":"1011434"}}}


id: GO:1902042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"down regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"down-regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"down-regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"downregulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"downregulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"inhibition of death receptor-mediated apoptosis","type":"narrow"},{"name":"inhibition of extrinsic apoptotic signaling pathway via death domain receptors","type":"narrow"},{"name":"negative regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902042"}


id: GO:0010729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:tb","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species biosynthetic process","termid":"GO:1903428"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"positive regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010729"}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: FYPO:0005255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: GO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed.","definition_xrefs":["PMID:8622651","PMID:8307945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"activin receptor complex","termid":"GO:0048179"}


id: PBO:0079867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk zinc finger","termid":"PBO:0079867"}


id: PBO:0075755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi repeat containing protein X-linked 2","termid":"PBO:0075755"}


id: PBO:0071946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 23","termid":"PBO:0071946"}


id: MONDO:0026782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondrodysplasia punctata 2, X-linked dominant (obsolete MONDO:0026782)","termid":"MONDO:0026782","xrefs":{"Monarch":{"xref_id":"0026782"}}}


id: MONDO:1012932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia that occurs in cats due to a mutation in the UGDH gene.","definition_xrefs":["PMID:32605545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, domestic cat","termid":"MONDO:1011195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, UGDH-related, domestic cat","secondary_identifiers":["OMIA:002541-9685"],"termid":"MONDO:1012932","xrefs":{"Monarch":{"xref_id":"1012932"}}}


id: PBO:0066663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 4","termid":"PBO:0066663"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_01805","SJAG_03126","SJAG_01837","SJAG_00082","SJAG_04280","SJAG_03048","SJAG_04140","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107145,113965,118030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[91880,95701,104329,113203,118703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: GO:0141082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host reactive oxygen species (ROS)-mediated innate immune response by directly degrading host ROS. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27825304","PMID:19684141","PMID:28288207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated detoxification of host-generated reactive oxygen species","secondary_identifiers":["Reactome:R-HSA-1222538"],"termid":"GO:0141082"}


id: GO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the periphery, in this case, any location in the body other than the thymus.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral T cell tolerance induction","synonyms":[{"name":"peripheral T lymphocyte tolerance induction","type":"exact"},{"name":"peripheral T-cell tolerance induction","type":"exact"},{"name":"peripheral T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002458"}


id: MONDO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical diagnosis presenting with painless cervical dilatation and spontaneous mid-trimester birth in recurrent pregnancies in the absence of spontaneous membrane rupture, bleeding or clinical chorioamnionitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical incompetence","secondary_identifiers":["ICD9:622.5","DOID:9681","MEDGEN:2972","MESH:D002581","ICD9:654.50","EFO:0007202","SCTID:17382005","UMLS:C0007871"],"termid":"MONDO:0005698","xrefs":{"Monarch":{"xref_id":"0005698"}}}


id: PBO:0069067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 314, pseudogene","termid":"PBO:0069067"}


id: GO:0050334
data:
  {"annotated_genes":["SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57355],"is_not":false,"summary":null,"term":"GO:0050334"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H+.","definition_xrefs":["RHEA:17509","EC:3.5.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02420":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"thiaminase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:THIAMINASE-RXN","KEGG_REACTION:R02133"],"synonyms":[{"name":"thiaminase II activity","type":"narrow"}],"termid":"GO:0050334","terms_by_termid":{"GO:0050334":null}}


id: GO:0106356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:19477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADPH) activity","synonyms":[{"name":"4-hydroxybenzoate 3-monooxygenase [NADPH] activity","type":"exact"}],"termid":"GO:0106356"}


id: PBO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, HOPS complex subunit Vam6 (predicted)","termid":"PBO:0001048"}


id: PR:O74356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25D12.06 gene.","definition_xrefs":["UniProtKB:O74356","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C25D12.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.06","synonyms":[{"name":"Spom972h-SPBC25D12.06","type":"exact"}],"termid":"PR:O74356"}


id: MONDO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Esophageal squamous cell carcinoma (ESCC) is a type of esophageal carcinoma (EC) that can affect any part of the esophagus, but is usually located in the upper or middle third.","definition_xrefs":["Orphanet:99977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal squamous cell carcinoma","secondary_identifiers":["ONCOTREE:ESCC","EFO:0005922","GARD:18901","UMLS:C0279626","icd11.foundation:1417891145","MEDGEN:124635","DOID:3748","MESH:D000077277","MESH:C562729","NCIT:C4024","SCTID:276804009"],"synonyms":[{"name":"ESCC","type":"exact"},{"name":"esophageal epidermoid carcinoma","type":"exact"},{"name":"esophageal scc","type":"exact"},{"name":"esophageal squamous cell cancer","type":"exact"},{"name":"esophageal squamous cell carcinoma","type":"exact"},{"name":"esophagus scc","type":"exact"},{"name":"esophagus squamous cell carcinoma","type":"exact"},{"name":"oesophagus scc","type":"exact"},{"name":"oesophagus squamous cell carcinoma","type":"exact"},{"name":"scc of esophagus","type":"exact"},{"name":"scc of oesophagus","type":"exact"},{"name":"scc of the esophagus","type":"exact"},{"name":"scc of the oesophagus","type":"exact"},{"name":"squamous cell car. - esophagus","type":"exact"},{"name":"squamous cell car. - oesophagus","type":"exact"},{"name":"squamous cell carcinoma of esophagus","type":"exact"},{"name":"squamous cell carcinoma of oesophagus","type":"exact"},{"name":"squamous cell carcinoma of the esophagus","type":"exact"},{"name":"squamous cell carcinoma of the oesophagus","type":"exact"}],"termid":"MONDO:0005580","xrefs":{"Monarch":{"xref_id":"0005580"}}}


id: PBO:0047022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A25, pseudogene","termid":"PBO:0047022"}


id: PBO:0027504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_fluconazole","termid":"PBO:0027504"}


id: GO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to non-antigenic stimuli such as heat or physical trauma.","definition_xrefs":["PMID:16459497","PMID:9073326","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}


id: GO:0039687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where only one strand is replicated at once, and which releases a single stranded DNA (ssDNA).","definition_xrefs":["VZ:1940","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"viral DNA strand displacement replication","termid":"GO:0039687"}


id: GO:0031032
data:
  {"annotated_genes":["SJAG_00268","SJAG_01143","SJAG_02864","SJAG_04781","SJAG_03045","SJAG_01732","SJAG_00082","SJAG_04498","SJAG_00279","SJAG_04887","SJAG_01787","SJAG_03025","SJAG_01805","SJAG_00845","SJAG_03048","SJAG_02838","SJAG_01665","SJAG_00228","SJAG_02431","SJAG_00938","SJAG_01894","SJAG_03703","SJAG_02831","SJAG_02592","SJAG_03379","SJAG_03088","SJAG_04621","SJAG_00700","SJAG_04077","SJAG_03596","SJAG_04597","SJAG_04930","SJAG_04982","SJAG_01943","SJAG_02392","SJAG_04703","SJAG_02700","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81770],"is_not":false,"summary":null,"term":"GO:0031032"},{"annotations":[91206,99952,100210,110113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[107113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044837"},{"annotations":[59919,70619,77345,94434,97202,112796,113871,99845,114312,104512,78094,58748,99574,120512,74310,100825,68530,121548,90130,76714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[79201],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[97203,114313,99955,100826,102870,99575,90131,102639,104369,58747],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[100199],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[112760,104314,105644,92649,96267,97765],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[91878,96309],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[95705,121207],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actomyosin structure organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin organization","type":"exact"},{"name":"actomyosin structure organisation","type":"exact"},{"name":"actomyosin structure organization and biogenesis","type":"related"}],"termid":"GO:0031032","terms_by_termid":{"GO:0031032":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: SO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading frame that could encode a full-length protein but which contains obvious mid-sequence disablements (frameshifts or premature stop codons).","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disabled_reading_frame","synonyms":[{"name":"dORF","type":"exact"},{"name":"disabled ORF","type":"exact"},{"name":"disabled_reading frame","type":"related"}],"termid":"SO:0002048"}


id: GO:0045433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during wing vibration where the male insect produces a species-specific acoustic signal called a love song.","definition_xrefs":["GOC:mtg_sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"},{"relation_name":"part_of","term_name":"male courtship behavior, veined wing vibration","termid":"GO:0016545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing generated song production","synonyms":[{"name":"male courtship behavior, song production","type":"broad"},{"name":"male courtship behaviour, song production","type":"broad"},{"name":"male courtship behaviour, veined wing generated song production","type":"exact"}],"termid":"GO:0045433"}


id: GO:2000196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"positively_regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female gonad development","synonyms":[{"name":"positive regulation of ovarian development","type":"exact"},{"name":"positive regulation of ovary development","type":"exact"}],"termid":"GO:2000196"}


id: PATO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity which relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"viscous","termid":"PATO:0000998"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased viscosity","synonyms":[{"name":"low viscosity","type":"exact"}],"termid":"PATO:0001694"}


id: GO:0097204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The older part of the phagocytic cup where the actin cytoskeleton disassembles, allowing early incoming and outgoing vesicular trafficking.","definition_xrefs":["PMID:20200225","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"phagocytic cup","termid":"GO:0001891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"phagocytic cup base","termid":"GO:0097204"}


id: PBO:0065093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 2","termid":"PBO:0065093"}


id: PATO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001137 ig g concentration (obsolete PATO:0001137)","termid":"PATO:0001137"}


id: PBO:0113101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate denatured, protein aggregates; responds to stresses (heat, ethanol, and sodium arsenite); required for the protein aggregate solid-to-liquid phase transition and dispersal of liquid condensates; involved in [PSI+] propagation; potentiated variants eliminate TDP-43 cytoplasmic aggregates to reduce proteotoxicity; becomes more abundant and forms cytoplasmic foci during replication stress","termid":"PBO:0113101"}


id: PR:Q09862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29E6.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29E6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.09","synonyms":[{"name":"Spom972h-SPAC29E6.09","type":"exact"}],"termid":"PR:Q09862"}


id: PBO:0046248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 4","termid":"PBO:0046248"}


id: GO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1-alpha-D-galactosyl-myo-inositol = raffinose + myo-inositol.","definition_xrefs":["MetaCyc:2.4.1.82-RXN","EC:2.4.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"galactinol-sucrose galactosyltransferase activity","secondary_identifiers":["RHEA:20161"],"synonyms":[{"name":"1-alpha-D-galactosyl-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"alpha-D-galactosyl-(1->3)-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"galactinol:sucrose 6-galactosyl transferase activity","type":"exact"},{"name":"galactosyltransferase, galactinol-sucrose","type":"exact"},{"name":"raffinose synthase activity","type":"exact"}],"termid":"GO:0047274"}


id: GO:0015975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from inorganic compounds; results in the oxidation of the compounds from which energy is released.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"energy derivation by oxidation of reduced inorganic compounds","secondary_identifiers":["Wikipedia:Lithotrophy"],"synonyms":[{"name":"chemolithotrophie","type":"exact"},{"name":"chemolithotrophy","type":"exact"},{"name":"lithotrophy","type":"exact"}],"termid":"GO:0015975"}


id: PR:O94574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.17c gene.","definition_xrefs":["UniProtKB:O94574","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase C1773.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.17c","synonyms":[{"name":"Spom972h-SPBC1773.17c","type":"exact"}],"termid":"PR:O94574"}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: PBO:0109363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 2","termid":"PBO:0109363"}


id: PBO:0053433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 378","termid":"PBO:0053433"}


id: PBO:0051748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 14","termid":"PBO:0051748"}


id: GO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility.","definition_xrefs":["PMID:12704238","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV pilus-dependent motility","synonyms":[{"name":"TFP-dependent motility","type":"exact"},{"name":"TFP-dependent movement","type":"exact"},{"name":"social gliding motility","type":"narrow"},{"name":"twitching motility","type":"narrow"},{"name":"type 4 pilus-dependent motility","type":"exact"},{"name":"type four pilus-dependent motility","type":"exact"}],"termid":"GO:0043107"}


id: GO:0098021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Component of the virus capsid (head), located on the outer head surface. Involved in the stabilization of the head structure and usually non-essential.","definition_xrefs":["GOC:bm","VZ:4398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, decoration","synonyms":[{"name":"decoration protein","type":"related"}],"termid":"GO:0098021"}


id: GO:0008612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["GOC:ma","ISBN:0198547684","RESID:AA0116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"peptidyl-lysine modification to peptidyl-hypusine","secondary_identifiers":["GO:0046515","Reactome:R-HSA-204626"],"synonyms":[{"name":"hypusine anabolism","type":"exact"},{"name":"hypusine anabolism from peptidyl-lysine","type":"exact"},{"name":"hypusine biosynthesis","type":"exact"},{"name":"hypusine biosynthetic process","type":"exact"},{"name":"hypusine biosynthetic process from peptidyl-lysine","type":"exact"},{"name":"hypusine formation","type":"exact"},{"name":"hypusine formation from peptidyl-lysine","type":"exact"},{"name":"hypusine synthesis","type":"exact"},{"name":"hypusine synthesis from peptidyl-lysine","type":"exact"},{"name":"hypusinylation","type":"exact"},{"name":"protein hypusination","type":"exact"}],"termid":"GO:0008612"}


id: PR:Q9USJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L7/L12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04575","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.09c","secondary_identifiers":["UniProtKB:Q9USJ9"],"synonyms":[{"name":"Spom972h-rplL","type":"exact"},{"name":"mitochondrial-nucleoid protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ9"}


id: PATO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological sex","termid":"PATO:0000047"}


id: MONDO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized scleroderma is the skin localized form of scleroderma characterized by fibrosis of the skin causing cutaneous plaques or strips.","definition_xrefs":["Orphanet:90289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"localized scleroderma","secondary_identifiers":["ICD9:701.0","MESH:D012594","MedDRA:10039712","icd11.foundation:1430740369","GARD:7058","EFO:1001361","DOID:8472","MEDGEN:48586","NCIT:C72069","SCTID:201048007","UMLS:C0036420"],"synonyms":[{"name":"Scleroderma, circumscribed or localised","type":"exact"},{"name":"Scleroderma, circumscribed or localized","type":"exact"},{"name":"Scleroderma, localised","type":"related"},{"name":"Scleroderma, localized","type":"related"},{"name":"circumscribed scleroderma","type":"exact"},{"name":"localised fibrosing scleroderma","type":"exact"},{"name":"localised morphea","type":"exact"},{"name":"localised morphoea","type":"exact"},{"name":"localised scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"localized fibrosing scleroderma","type":"exact"},{"name":"localized morphea","type":"exact"},{"name":"localized morphoea","type":"exact"},{"name":"localized scleroderma","type":"exact"},{"name":"localized scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"morphea","type":"exact"}],"termid":"MONDO:0019562","xrefs":{"Monarch":{"xref_id":"0019562"}}}


id: GO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of fractalkine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:12729461","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"fractalkine production","secondary_identifiers":["GO:0050751","GO:0050756","GO:0050754"],"synonyms":[{"name":"ABCD-3 production","type":"exact"},{"name":"CX3CL1 production","type":"exact"},{"name":"fractalkine biosynthetic process","type":"narrow"},{"name":"fractalkine metabolic process","type":"narrow"},{"name":"neurotactin production","type":"exact"}],"termid":"GO:0032603"}


id: PBO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 13","termid":"PBO:0075260"}


id: GO:0043749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenol + MgATP + H2O = phenylphosphate + MgAMP + orthophosphate.","definition_xrefs":["PMID:15547277"],"gene_count":0,"genotype_count":0,"name":"obsolete phenol, water dikinase activity (obsolete GO:0043749)","synonyms":[{"name":"ATP:phenol:water phosphotransferase activity","type":"exact"},{"name":"phenol:water dikinase activity","type":"exact"},{"name":"phenylphosphate synthase activity","type":"exact"}],"termid":"GO:0043749"}


id: PBO:0054276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1666","termid":"PBO:0054276"}


id: PBO:0016931
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane AnChored protein","termid":"PBO:0016931"}


id: MONDO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medical condition characterized by major shock and renal failure after a crushing injury to skeletal muscle.","definition_xrefs":["Wikipedia:Crush_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"crush syndrome","secondary_identifiers":["MESH:D003444","UMLS:C0010392","MEDGEN:3671","SCTID:23697004"],"synonyms":[{"name":"acute renal failure due to rhabdomyolysis","type":"related"},{"name":"bywaters' syndrome","type":"related"},{"name":"crush kidney","type":"related"},{"name":"crush syndrome","type":"exact"},{"name":"crush syndromes","type":"related"},{"name":"ischaemic muscular necrosis syndrome","type":"related"},{"name":"ischemic muscular necrosis syndrome","type":"related"},{"name":"myoglobinuric acute renal failure","type":"related"},{"name":"myoglobinuric nephrosis","type":"related"},{"name":"renal failure following crushing injury","type":"related"},{"name":"syndrome, crush","type":"related"},{"name":"syndromes, crush","type":"related"}],"termid":"MONDO:0043549","xrefs":{"Monarch":{"xref_id":"0043549"}}}


id: PBO:0069360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 620, pseudogene","termid":"PBO:0069360"}


id: GO:1905640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetaldehyde stimulus.","definition_xrefs":["GO_REF:0000071","PMID:27687866","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetaldehyde","termid":"GO:1905640"}


id: GO:0098521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction","termid":"GO:0098521"}


id: PBO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, predicted, human BRP44 ortholog","termid":"PBO:0000210"}


id: MONDO:0000148
data:
  {"annotated_genes":["SJAG_02194","SJAG_01836","SJAG_05979","SJAG_03855","SJAG_00566","SJAG_03125"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[88404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[88170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[88001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[88991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_03125":null,"SJAG_03855":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:614742"],"termid":"MONDO:0000148","terms_by_termid":{"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0000148"}}}


id: MONDO:0006023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006023 (obsolete MONDO:0006023)","termid":"MONDO:0006023","xrefs":{"Monarch":{"xref_id":"0006023"}}}


id: GO:1990295
data:
  {"annotated_genes":["SJAG_02045","SJAG_02695","SJAG_02336","SJAG_00930","SJAG_03073","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105491,105841,110233],"is_not":false,"summary":null,"term":"GO:1990295"},{"annotations":[103376,98896],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905759"},{"annotations":[93272],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"A cytoskeletal part that consists of an array of microtubules and associated molecules that forms at the end of anaphase, and in which microtubules are nucleated from an equatorial microtubule organizing center.","definition_xrefs":["PMID:9601091","PMID:11792817","PMID:17072892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01297":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"post-anaphase microtubule array","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAA","type":"exact"},{"name":"post-anaphase array","type":"exact"}],"termid":"GO:1990295","terms_by_termid":{"GO:1905759":null,"GO:1905760":null,"GO:1990295":null}}


id: PBO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor","termid":"PBO:0002382"}


id: MONDO:0010808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fatal familial insomnia (FFI) is a very rare form of prion disease characterized by subacute onset of insomnia showing as a reduced overall sleep time, autonomic dysfunction, and motor disturbances.","definition_xrefs":["Orphanet:466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"insomnia","termid":"MONDO:0013600"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"fatal familial insomnia","secondary_identifiers":["ICD10CM:A81.83","MESH:D034062","MedDRA:10072077","NCIT:C84711","DOID:0050433","OMIM:600072","icd11.foundation:669154658","ICD9:046.72","SCTID:83157008","UMLS:C0206042","NANDO:1200191","GARD:6429","MEDGEN:104768","NORD:1920"],"synonyms":[{"name":"FFI","type":"related"},{"name":"Insomnia familial fatal","type":"related"},{"name":"Insomnia, fatal familial","type":"related"},{"name":"familial fatal insomnia","type":"related"},{"name":"fatal familial INSOMNIA","type":"related"},{"name":"fatal familial insomnia","type":"exact"}],"termid":"MONDO:0010808","xrefs":{"Monarch":{"xref_id":"0010808"}}}


id: MONDO:0010984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Usher syndrome type I that is caused by homozygous or compound heterozygous mutation in the gene encoding cadherin-23 (CDH23) on chromosome 10q22. It is inherited in an autosomal recessive manner.","definition_xrefs":["OMIM:601067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1D","secondary_identifiers":["ICD10CM:H35.5","UMLS:C1832845","MEDGEN:322051","DOID:0110831","GARD:5438"],"synonyms":[{"name":"USH1D","type":"exact"},{"name":"USHER syndrome, type ID","type":"related"},{"name":"Ush1D/F, Cdh23/Pcdh15, digenic","type":"related"},{"name":"Usher syndrome type 1D","type":"exact"},{"name":"Usher syndrome type ID","type":"exact"},{"name":"Usher syndrome, type 1D","type":"related"},{"name":"Usher syndrome, type 1D/F digenic","type":"exact"},{"name":"Usher syndrome, type Id/F, Cdh23/Pcdh15, digenic","type":"related"}],"termid":"MONDO:0010984","xrefs":{"Monarch":{"xref_id":"0010984"}}}


id: PBO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-13","termid":"PBO:0051280"}


id: PBO:0031238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_osmotic_stress","termid":"PBO:0031238"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_05184","SJAG_01415","SJAG_00064","SJAG_04653","SJAG_03002","SJAG_02833","SJAG_02471","SJAG_02493","SJAG_02486","SJAG_03488","SJAG_03089","SJAG_01030","SJAG_02004","SJAG_03142","SJAG_02645","SJAG_01659","SJAG_03678","SJAG_01309","SJAG_04010","SJAG_03705","SJAG_02529","SJAG_02248","SJAG_03600","SJAG_01367","SJAG_04771","SJAG_04982","SJAG_02368","SJAG_00858","SJAG_01699","SJAG_02819","SJAG_01025","SJAG_03704","SJAG_03581","SJAG_00807","SJAG_02160","SJAG_02307","SJAG_03246","SJAG_04464","SJAG_04837","SJAG_05210","SJAG_00514","SJAG_04491","SJAG_00216","SJAG_01576","SJAG_02027","SJAG_04615","SJAG_06588","SJAG_00143"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57185,57484,57859,61709,62757,65865,66455,67687,70185,70925,71548,71733,71776,72440,73200,73676,73763,74120,74254,75685,75699,75909,76435,76944,77339,79231,79959,79989,80381,80790,81292,81907,82209,92888,93084,94013,94665,95942,96218,99232,99650,99894,101035,108389,108969,110295,117557,118526],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. 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exchange factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8848618","Reactome:R-HSA-109817","Reactome:R-HSA-3928642","Reactome:R-HSA-2424477","Reactome:R-HSA-379044","Reactome:R-HSA-751029","Reactome:R-HSA-8875318","Reactome:R-HSA-399995","Reactome:R-HSA-392195","Reactome:R-HSA-9664991","Reactome:R-HSA-9014433","Reactome:R-HSA-442291","Reactome:R-HSA-5654402","GO:0008433","Reactome:R-HSA-1225951","Reactome:R-HSA-8877612","Reactome:R-HSA-5655241","Reactome:R-HSA-6811429","Reactome:R-HSA-9018804","GO:0005088","Reactome:R-HSA-5623508","GO:0016219","Reactome:R-HSA-1250463","Reactome:R-HSA-170979","Reactome:R-HSA-177945","Reactome:R-HSA-2730840","Reactome:R-HSA-9013109","Reactome:R-HSA-9032798","Reactome:R-HSA-186834","Reactome:R-HSA-1433415","Reactome:R-HSA-8877308","GO:0005090","Reactome:R-HSA-9619803","Reactome:R-HSA-1225957","Reactome:R-HSA-8877813","Reactome:R-HSA-5694409","GO:0005087","Reactome:R-HSA-8877998","Reactome:R-HSA-9014296","Reactome:R-HSA-4093336","Reactome:R-HSA-445064","Reactome:R-HSA-5654413","Reactome:R-HSA-5637806","Reactome:R-HSA-5654392","Reactome:R-HSA-825631","Reactome:R-HSA-6811418","Reactome:R-HSA-8876188","Reactome:R-HSA-9665009","Reactome:R-HSA-5654647","GO:0017112","Reactome:R-HSA-156913","Reactome:R-HSA-399938","Reactome:R-HSA-8877311","Reactome:R-HSA-354173","Reactome:R-HSA-1250498","Reactome:R-HSA-2179407","Reactome:R-HSA-5654600","Reactome:R-HSA-379048","Reactome:R-HSA-400092","Reactome:R-HSA-180687","Reactome:R-HSA-9665404","Reactome:R-HSA-5637808","Reactome:R-HSA-9013435","Reactome:R-HSA-389348","Reactome:R-HSA-428917","Reactome:R-HSA-5672965","Reactome:R-HSA-203977","Reactome:R-HSA-8875320","Reactome:R-HSA-187746","Reactome:R-HSA-8875568","Reactome:R-HSA-392870","Reactome:R-HSA-749453","Reactome:R-HSA-3928632","Reactome:R-HSA-8877475","Reactome:R-HSA-442273","Reactome:R-HSA-2485180","Reactome:R-HSA-114544","Reactome:R-HSA-416530","Reactome:R-HSA-5218829","Reactome:R-HSA-8876615","Reactome:R-HSA-5218839","Reactome:R-HSA-8851899","Reactome:R-HSA-420883","Reactome:R-HSA-1168636","Reactome:R-HSA-8877760","Reactome:R-HSA-2029445","GO:0017034","Reactome:R-HSA-9013143","Reactome:R-HSA-9018817","Reactome:R-HSA-428535","Reactome:R-HSA-9665700","Reactome:R-HSA-9695853","Reactome:R-HSA-442314","Reactome:R-HSA-8877451","Reactome:R-HSA-6807868","Reactome:R-HSA-1250383","Reactome:R-HSA-3965444","Reactome:R-HSA-8982640","Reactome:R-HSA-3928612","Reactome:R-HSA-9017491","Reactome:R-HSA-9026891","Reactome:R-HSA-9032067","Reactome:R-HSA-9693111","Reactome:R-HSA-9634418","GO:0005089","GO:0016220","Reactome:R-HSA-5623521","Reactome:R-HSA-3928592","Reactome:R-HSA-5655277","Reactome:R-HSA-350769","Reactome:R-HSA-8851877","Reactome:R-HSA-416588","Reactome:R-HSA-5686071","Reactome:R-HSA-205039","Reactome:R-HSA-939265","Reactome:R-HSA-9665408","Reactome:R-HSA-5654618","Reactome:R-HSA-8964604","Reactome:R-HSA-9703441","Reactome:R-HSA-9666428","Reactome:R-HSA-418856","GO:0019839","Reactome:R-HSA-419166","Reactome:R-HSA-109807","Reactome:R-HSA-8982637","Reactome:R-HSA-1433471","Reactome:R-HSA-210977","Reactome:R-HSA-5655347","Reactome:R-HSA-5617816","Reactome:R-HSA-8876616","Reactome:R-HSA-2029451","Reactome:R-HSA-418850","Reactome:R-HSA-2029467","Reactome:R-HSA-5218850","Reactome:R-HSA-5654663","Reactome:R-HSA-8876193","Reactome:R-HSA-9033292","Reactome:R-HSA-9607304","Reactome:R-HSA-9665707","Reactome:R-HSA-9751201","GO:0008321","Reactome:R-HSA-9029158","Reactome:R-HSA-5686318","Reactome:R-HSA-9670436","Reactome:R-HSA-1306972","Reactome:R-HSA-194518","Reactome:R-HSA-9666430","Reactome:R-HSA-442732","Reactome:R-HSA-8980691","Reactome:R-HSA-8876191","Reactome:R-HSA-177938","Reactome:R-HSA-9672170","Reactome:R-HSA-8851827","Reactome:R-HSA-9639286","Reactome:R-HSA-380073","Reactome:R-HSA-6811414","Reactome:R-HSA-5655326","Reactome:R-HSA-8876454","Reactome:R-HSA-8875591","GO:0005086","Reactome:R-HSA-5654426","Reactome:R-HSA-9672163","Reactome:R-HSA-171026","Reactome:R-HSA-3928633","Reactome:R-HSA-8850041","Reactome:R-HSA-9013159","Reactome:R-HSA-392054","Reactome:R-HSA-9013023","Reactome:R-HSA-9624845","Reactome:R-HSA-3928651","Reactome:R-HSA-9018747","Reactome:R-HSA-169904","Reactome:R-HSA-428750","Reactome:R-HSA-8876837","Reactome:R-HSA-9660824","GO:0030676","Reactome:R-HSA-9036301","GO:0017132","Reactome:R-HSA-9680385","Reactome:R-HSA-418579","Reactome:R-HSA-9018768","Reactome:R-HSA-2424476","Reactome:R-HSA-3928628","Reactome:R-HSA-9018825","Reactome:R-HSA-9640167","Reactome:R-HSA-389350","Reactome:R-HSA-8876190"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: GO:0086091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cardiac conduction process that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate by cardiac conduction","termid":"GO:0086091"}


id: MONDO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute form of megacolon, severe pathological dilatation of the colon. It is associated with clinical conditions such as ulcerative colitis; crohn disease; amebic dysentery; or clostridium enterocolitis.","definition_xrefs":["MESH:D008532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon","termid":"MONDO:0001273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"toxic megacolon","secondary_identifiers":["ICD10CM:K59.31","DOID:1770","ICD9:564.7","MEDGEN:9940","SCTID:28536002","UMLS:C0025162","icd11.foundation:1497870078"],"termid":"MONDO:0002105","xrefs":{"Monarch":{"xref_id":"0002105"}}}


id: MONDO:0000477
data:
  {"annotated_genes":["SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"A dystonia that is localized to a specific part of the body.","definition_xrefs":["DOID:0050836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"focal dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:445006008","MEDGEN:149279","UMLS:C0743332"],"termid":"MONDO:0000477","terms_by_termid":{"MONDO:0010747":null},"xrefs":{"Monarch":{"xref_id":"0000477"}}}


id: PBO:0041441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 78","termid":"PBO:0041441"}


id: MONDO:0013147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the NEXN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1CC","secondary_identifiers":["GARD:15621","OMIM:613122","DOID:0110424","MEDGEN:413929","MESH:C567733","UMLS:C2751084"],"synonyms":[{"name":"CMD1CC","type":"exact"},{"name":"NEXN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1CC","type":"related"},{"name":"cardiomyopathy, dilated, type 1Cc","type":"exact"},{"name":"dilated cardiomyopathy type 1CC","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in NEXN","type":"exact"}],"termid":"MONDO:0013147","xrefs":{"Monarch":{"xref_id":"0013147"}}}


id: PBO:0048692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 1","termid":"PBO:0048692"}


id: GO:0014902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube differentiation","termid":"GO:0014902"}


id: PBO:0077471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191B","termid":"PBO:0077471"}


id: MOD:00161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glucosylated L-cysteine.","definition_xrefs":["PubMed:5286858","PubMed:15279557","Unimod:41#C","RESID:AA0152","PubMed:1145128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905","MOD:00764"],"is_obsolete":false,"name":"S-glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[(beta-D-glucopyranosyl)sulfanyl]propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (Glc) cysteine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"S-(beta-D-glucopyranosyl)cysteine","type":"exact"},{"name":"S-glucosyl-L-cysteine","type":"exact"},{"name":"S-glycosyl-cysteine","type":"exact"},{"name":"SGlcCys","type":"exact"}],"termid":"MOD:00161"}


id: GO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of M phase of mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prophase","termid":"GO:0051324"},{"relation_name":"part_of","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000087"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000087","GO:0008150"],"is_obsolete":false,"name":"mitotic prophase","termid":"GO:0000088"}


id: MONDO:0037149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, atypical type","secondary_identifiers":["MEDGEN:1843277","GARD:16749","Orphanet:85295","UMLS:C5680206"],"synonyms":[{"name":"HSD10 deficiency, atypical type","type":"exact"},{"name":"Syndromic X-linked intellectual disability type 10","type":"exact"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behavior syndrome","type":"broad"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behaviour syndrome","type":"broad"}],"termid":"MONDO:0037149","xrefs":{"Monarch":{"xref_id":"0037149"}}}


id: MONDO:0013310
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89114],"is_not":false,"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency is a unique form of congenital adrenal hyperplasia (CAH) characterized by glucocorticoid deficiency, severe sexual ambiguity in both sexes and skeletal (especially craniofacial) malformations.","definition_xrefs":["Orphanet:95699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"congenital adrenal hyperplasia due to cytochrome P450 oxidoreductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200402","icd11.foundation:497412536","SCTID:715733000","DOID:0080925","NANDO:2200375","NCIT:C174439","UMLS:C1860042","OMIM:613571","GARD:12664","MEDGEN:348008"],"synonyms":[{"name":"POR deficiency","type":"exact"},{"name":"PORD","type":"exact"},{"name":"adrenal hyperplasia, congenital, due to cytochrome P450 oxidoreductase deficiency","type":"related"},{"name":"congenital adrenal hyperplasia due to cytochrome POR deficiency","type":"exact"},{"name":"disordered steroidogenesis due to POR deficiency","type":"related"},{"name":"disordered steroidogenesis due to cytochrome P450 oxidoreductase","type":"related"},{"name":"disordered steroidogenesis due to cytochrome P450 oxidoreductase deficiency","type":"related"}],"termid":"MONDO:0013310","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0013310"}}}


id: MONDO:0021275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin papilloma","termid":"MONDO:0002536"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"papilloma of eyelid","secondary_identifiers":["NCIT:C4061","SCTID:314515006","UMLS:C1142491","icd11.foundation:643260480","MEDGEN:256159"],"synonyms":[{"name":"eyelid papilloma","type":"exact"},{"name":"papilloma of the eyelid","type":"exact"}],"termid":"MONDO:0021275","xrefs":{"Monarch":{"xref_id":"0021275"}}}


id: PBO:0068574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 25, pseudogene","termid":"PBO:0068574"}


id: GO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Cleavage of substrates with Phe and Leu in P2.","definition_xrefs":["EC:3.4.22.41"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin F activity (obsolete GO:0016946)","synonyms":[{"name":"cathepsin F activity","type":"exact"}],"termid":"GO:0016946"}


id: PBO:0059688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 54","termid":"PBO:0059688"}


id: PBO:0053674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 857","termid":"PBO:0053674"}


id: PR:O14358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm27 gene.","definition_xrefs":["UniProtKB:O14358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S27, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.12c","synonyms":[{"name":"Spom972h-rsm27","type":"exact"}],"termid":"PR:O14358"}


id: PBO:0064986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 3","termid":"PBO:0064986"}


id: PBO:0045304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin binding protein","termid":"PBO:0045304"}


id: PBO:0067416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 530, pseudogene","termid":"PBO:0067416"}


id: PBO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8 (predicted)","termid":"PBO:0001326"}


id: PBO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 1","termid":"PBO:0062132"}


id: GO:0043425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transcriptional networks of many developmental pathways.","definition_xrefs":["PMID:9144210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"bHLH transcription factor binding","termid":"GO:0043425"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: GO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the foregut to change their fates and specify the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"positively_regulates","term_name":"lung field specification","termid":"GO:0060424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung induction","termid":"GO:0060492"}


id: PBO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy","termid":"PBO:0003309"}


id: GO:0097170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose metabolism","type":"exact"}],"termid":"GO:0097170"}


id: GO:0014804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the terminal cisterna envelope. This space is enriched in calsequestrin.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"terminal cisterna","termid":"GO:0014802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"terminal cisterna lumen","termid":"GO:0014804"}


id: PBO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 4","termid":"PBO:0048635"}


id: PBO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 56 pseudogene","termid":"PBO:0070142"}


id: MONDO:0007868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyperekplexia that has material basis in heterozygous, homozygous, or compound heterozygous mutation in the GLRA1 gene on chromosome 5q32.","definition_xrefs":["DOID:0060696","PMID:7881416","PMID:8298642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 1","secondary_identifiers":["OMIM:149400","UMLS:C4551954","MEDGEN:1647581"],"synonyms":[{"name":"HKPX1","type":"exact"},{"name":"Kok disease","type":"related"},{"name":"Sthe","type":"related"},{"name":"Stiff-Man syndrome, congenital","type":"related"},{"name":"Stiff-Person syndrome, congenital","type":"related"},{"name":"Stiff-baby syndrome","type":"related"},{"name":"exaggerated startle reaction","type":"related"},{"name":"hyperekplexia 1","type":"exact"},{"name":"hyperekplexia type 1","type":"exact"},{"name":"hyperekplexia, hereditary 1","type":"related"},{"name":"hyperekplexia, hereditary type 1","type":"exact"},{"name":"startle disease, familial","type":"related"},{"name":"startle reaction, exaggerated","type":"related"}],"termid":"MONDO:0007868","xrefs":{"Monarch":{"xref_id":"0007868"}}}


id: GO:0098634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the extracellular matrix.","definition_xrefs":["Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488","GO:0098631"],"is_obsolete":false,"name":"cell-matrix adhesion mediator activity","synonyms":[{"name":"cell-matrix adhesion molecule","type":"exact"},{"name":"protein binding involved in cell-matrix adhesion","type":"exact"}],"termid":"GO:0098634"}


id: MONDO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, adult-onset, with leukoencephalopathy","secondary_identifiers":["UMLS:C1854646","MEDGEN:340269","MESH:C565361","OMIM:253590"],"synonyms":[{"name":"muscular dystrophy, adult-onset, with leukoencephalopathy","type":"exact"}],"termid":"MONDO:0009674","xrefs":{"Monarch":{"xref_id":"0009674"}}}


id: PBO:0072976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 2","termid":"PBO:0072976"}


id: GO:1901376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organic heteropentacyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic heteropentacyclic compound metabolic process (obsolete GO:1901376)","synonyms":[{"name":"organic heteropentacyclic compound metabolism","type":"exact"}],"termid":"GO:1901376"}


id: PR:O74802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.09","secondary_identifiers":["UniProtKB:O74802"],"synonyms":[{"name":"3-hydroxyisobutyryl-coenzyme A hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIB-CoA hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIBYL-CoA-H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2D10.09","type":"related"},{"name":"Spom972h-HIBCH","type":"exact"}],"termid":"PR:O74802"}


id: PBO:0017755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, human RBM8A ortholog (predicted)","termid":"PBO:0017755"}


id: PBO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Dnt1","termid":"PBO:0004626"}


id: GO:0006889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the concentration of calcium in the endoplasmic reticulum.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium in ER (obsolete GO:0006889)","synonyms":[{"name":"regulation of calcium in ER","type":"exact"}],"termid":"GO:0006889"}


id: GO:0007403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a glial cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate determination","secondary_identifiers":["GO:0043361"],"termid":"GO:0007403"}


id: MONDO:0022642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoid tumor that occurs during childhood.","definition_xrefs":["NCIT:C118810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood carcinoid tumor","secondary_identifiers":["UMLS:C3899673","GARD:9315","MEDGEN:859267"],"synonyms":[{"name":"carcinoid tumor (disease) of childhood","type":"exact"},{"name":"carcinoid tumor childhood","type":"related"},{"name":"carcinoid tumour (disease) of childhood","type":"exact"},{"name":"carcinoid tumour childhood","type":"related"},{"name":"childhood carcinoid tumor","type":"exact"},{"name":"childhood carcinoid tumor (disease)","type":"exact"},{"name":"childhood carcinoid tumour (disease)","type":"exact"},{"name":"paediatric carcinoid tumour (disease)","type":"exact"},{"name":"pediatric carcinoid tumor (disease)","type":"exact"}],"termid":"MONDO:0022642","xrefs":{"Monarch":{"xref_id":"0022642"}}}


id: PBO:0063117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 3","termid":"PBO:0063117"}


id: PBO:0057203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374b","termid":"PBO:0057203"}


id: PBO:0084843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L4 ribosomal protein and human mitoribosomal MRP-L4 protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084843"}


id: PBO:0108566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Alb1","termid":"PBO:0108566"}


id: PBO:0072968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 3, pseudogene","termid":"PBO:0072968"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: MONDO:0007667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subependymoma is a rare and slow growing type of ependymoma, often presenting in middle-aged adults, found more commonly in men than in women, usually located in the fourth and lateral ventricles and manifesting with variable symptoms including headache, nausea, and loss of balance. In some cases it can be asymptomatic. It is usually associated with a better prognosis than other forms of ependymoma.","definition_xrefs":["Orphanet:251639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade ependymoma","termid":"MONDO:0016697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subependymoma","secondary_identifiers":["MEDGEN:64637","DOID:4843","GARD:10070","UMLS:C0206725","NCIT:C3795","ONCOTREE:SUBE","ICDO:9383/1","MESH:D018315","EFO:1000553"],"synonyms":[{"name":"SUBEPENDYMOMA, benign","type":"exact"},{"name":"WHO grade I ependymal neoplasm","type":"exact"},{"name":"WHO grade I ependymal tumor","type":"exact"},{"name":"WHO grade I ependymal tumour","type":"exact"},{"name":"mixed subependymoma-ependymoma","type":"exact"},{"name":"subependymal astrocytoma","type":"exact"},{"name":"subependymal astrocytoma (formerly)","type":"related"},{"name":"subependymal glioma","type":"exact"},{"name":"subependymoma","type":"exact"}],"termid":"MONDO:0007667","xrefs":{"Monarch":{"xref_id":"0007667"}}}


id: GO:0034544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-4-amino-6-carboxy-2-oxo-hexa-3,5-dienoate + H2O = fumarylpyruvate + NH3.","definition_xrefs":["UM-BBD_reactionID:r0810"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-ACOHDA hydrolase activity (obsolete GO:0034544)","termid":"GO:0034544"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["RHEA:59740","PMID:12681491","PMID:22968831","PMID:22247542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: FYPO:0000079
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121165,121180],"is_not":false,"summary":null,"term":"FYPO:0000079"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caspofungin. Cells stop growing (and may die) at a concentration of caspofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pmk1delta","pck2delta"],"synonyms":[{"name":"hypersensitive to caspofungin","type":"exact"},{"name":"sensitive to caspofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to caspofungin during vegetative growth","type":"exact"},{"name":"sensitive to glucan synthase inhibitor","type":"broad"}],"termid":"FYPO:0000079","terms_by_termid":{"FYPO:0000079":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0063807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit beta pseudogene 2","termid":"PBO:0063807"}


id: PBO:0031027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_pheromone_in_growth_medium","termid":"PBO:0031027"}


id: MOD:02021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a timnodonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"timnodonoylated residue","termid":"MOD:02021"}


id: MONDO:0013193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyrotoxic periodic paralysis in which the cause of the disease is a mutation in the KCNJ18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thyrotoxic periodic paralysis","termid":"MONDO:0019201"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic periodic paralysis, susceptibility to, 2","secondary_identifiers":["UMLS:C2750473","MEDGEN:413851","OMIM:613239"],"synonyms":[{"name":"KCNJ18 thyrotoxic periodic paralysis","type":"exact"},{"name":"TTPP2","type":"related"},{"name":"thyrotoxic periodic paralysis caused by mutation in KCNJ18","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, 2","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013193","xrefs":{"Monarch":{"xref_id":"0013193"}}}


id: PBO:0053092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2D","termid":"PBO:0053092"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["GO:0006892","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: PBO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho3","termid":"PBO:0000740"}


id: PBO:0081256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF25 divergent transcript","termid":"PBO:0081256"}


id: GO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"positively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium germination","synonyms":[{"name":"positive regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075224"}


id: GO:0062210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regeneration process by which a damaged or lost shoot regrows or re-differentiates. This process may occur via de-differentiation and subsequent reprogramming of somatic cells or activation of existing undifferentiated (meristematic) cells to produce a new shoot meristem and subsequently a new shoot.","definition_xrefs":["PMID:27143753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot regeneration","synonyms":[{"name":"shoot system regeneration","type":"exact"}],"termid":"GO:0062210"}


id: MONDO:0008558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder in which the number of circulating platelets is reduced due to their antibody-mediated destruction. ITP is a diagnosis of exclusion and is heterogeneous in origin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"primary thrombocytopenia","termid":"MONDO:0004680"},{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia","termid":"MONDO:0019098"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"thrombocytopenic purpura","termid":"MONDO:0043768"},{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune thrombocytopenic purpura","secondary_identifiers":["GARD:5194","MEDGEN:584986","Orphanet:3002","ICD9:287.31","NANDO:1200315","icd11.foundation:364346400","OMIM:188030","UMLS:C0398650","DOID:8924","MedDRA:10021245","NANDO:2200645","NCIT:C3446","EFO:0007160"],"synonyms":[{"name":"AITP","type":"related"},{"name":"ITP","type":"exact"},{"name":"Werlhof's disease","type":"related"},{"name":"autoimmune thrombocytopenic purpura","type":"exact"},{"name":"ideopath thrombocytopenic pur","type":"related"},{"name":"idiopathic purpura","type":"related"},{"name":"idiopathic thrombocytopenia","type":"exact"},{"name":"idiopathic thrombocytopenia purpura","type":"exact"},{"name":"idiopathic thrombocytopenic purpura","type":"exact"},{"name":"immune thrombocytopenia","type":"broad"},{"name":"immune thrombocytopenic purpura","type":"related"},{"name":"primary thrombocytopenic purpura","type":"exact"},{"name":"thrombocytopenic purpura autoimmune","type":"related"},{"name":"thrombocytopenic purpura, autoimmune","type":"exact"}],"termid":"MONDO:0008558","xrefs":{"Monarch":{"xref_id":"0008558"}}}


id: PBO:0076557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 1","termid":"PBO:0076557"}


id: PBO:0080345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 109 pseudogene","termid":"PBO:0080345"}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["PMID:11124949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA photolyase activity","termid":"GO:0003913"}


id: PATO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in bearer by virtue of the bearer's exhibiting or being caused by radioactivity.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activity (of a radionuclide)","termid":"PATO:0001740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radioactive","termid":"PATO:0001741"}


id: MONDO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An active inflammatory process affecting the liver for more than six months. Causes include viral infections, autoimmune disorders, drugs, and metabolic disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis","secondary_identifiers":["ICD9:571.4","MESH:D006505","DOID:2237","ICD9:570","SCTID:197268000","UMLS:C0019158","ICD9:571.40","ICD9:571.41","MEDGEN:5515","NCIT:C3095"],"synonyms":[{"name":"Hepatitides","type":"related"},{"name":"Hepatitis","type":"exact"},{"name":"acute and subacute liver necrosis","type":"narrow"},{"name":"acute hepatitis","type":"narrow"},{"name":"acute/subac. necrosis of liver","type":"narrow"},{"name":"animal hepatitis","type":"narrow"},{"name":"chronic hepatitis","type":"narrow"},{"name":"chronic persistent hepatitis","type":"narrow"},{"name":"hepatitis","type":"exact"},{"name":"inflammation of liver","type":"exact"},{"name":"liver inflammation","type":"exact"}],"termid":"MONDO:0002251","xrefs":{"Monarch":{"xref_id":"0002251"}}}


id: GO:0050843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine catabolic process","synonyms":[{"name":"S-adenosyl methionine catabolic process","type":"exact"},{"name":"S-adenosyl methionine catabolism","type":"exact"},{"name":"S-adenosylmethionine breakdown","type":"exact"},{"name":"S-adenosylmethionine catabolism","type":"exact"},{"name":"S-adenosylmethionine degradation","type":"exact"},{"name":"SAM catabolic process","type":"exact"}],"termid":"GO:0050843"}


id: MONDO:0022735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cyst","termid":"MONDO:0005262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus cyst","secondary_identifiers":["UMLS:C0338597","SCTID:230790004","MEDGEN:87376","NCIT:C4351"],"synonyms":[{"name":"CPC - choroid plexus cyst","type":"related"},{"name":"choroid plexus cyst","type":"exact"}],"termid":"MONDO:0022735","xrefs":{"Monarch":{"xref_id":"0022735"}}}


id: GO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:bf","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal lumen pH","termid":"GO:0035751"},{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal lumen pH elevation","synonyms":[{"name":"lysosome pH elevation","type":"exact"}],"termid":"GO:0035752"}


id: PBO:0044593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 1","termid":"PBO:0044593"}


id: PBO:0043309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 2","termid":"PBO:0043309"}


id: PBO:0078964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 3-1","termid":"PBO:0078964"}


id: PBO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp1","termid":"PBO:0003047"}


id: PBO:0091430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule","termid":"PBO:0091430"}


id: GO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"negatively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of prostaglandin biosynthetic process","synonyms":[{"name":"down regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"down-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"downregulation of prostaglandin biosynthetic process","type":"exact"},{"name":"inhibition of prostaglandin biosynthetic process","type":"narrow"},{"name":"negative regulation of prostaglandin anabolism","type":"exact"},{"name":"negative regulation of prostaglandin biosynthesis","type":"exact"},{"name":"negative regulation of prostaglandin formation","type":"exact"},{"name":"negative regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031393"}


id: PBO:0078783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 8-1","termid":"PBO:0078783"}


id: PBO:0029140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_in_autophagosome","termid":"PBO:0029140"}


id: GO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome.","definition_xrefs":["ISBN:0124325653","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"acrosomal vesicle","secondary_identifiers":["Wikipedia:Acrosome"],"synonyms":[{"name":"acrosomal granule","type":"exact"},{"name":"acrosome","type":"exact"}],"termid":"GO:0001669"}


id: PBO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siepin homolog","termid":"PBO:0002066"}


id: PBO:0053130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCT antisense RNA 1","termid":"PBO:0053130"}


id: PBO:0029905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_Golgi_apparatus","termid":"PBO:0029905"}


id: MONDO:0004792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the UBERON:0016632.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of isthmus of fallopian tube","secondary_identifiers":["MEDGEN:1843459","DOID:9459","UMLS:C0153575","ICD9:182.1"],"synonyms":[{"name":"cancer of isthmus of fallopian tube","type":"exact"},{"name":"isthmus of fallopian tube cancer","type":"exact"},{"name":"malignant isthmus of fallopian tube neoplasm","type":"exact"},{"name":"malignant neoplasm of isthmus of fallopian tube","type":"exact"}],"termid":"MONDO:0004792","xrefs":{"Monarch":{"xref_id":"0004792"}}}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: PBO:0060932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 2 interacting protein","termid":"PBO:0060932"}


id: GO:0006372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete lariat formation, 5'-splice site cleavage (obsolete GO:0006372)","synonyms":[{"name":"lariat formation, 5'-splice site cleavage","type":"exact"}],"termid":"GO:0006372"}


id: MONDO:0043465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absence of hydrochloric acid in the gastric juice.","definition_xrefs":["NCIT:C2850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"achlorhydria","secondary_identifiers":["MESH:D000126","icd11.foundation:157689543","SCTID:47481007","MEDGEN:1714","UMLS:C0001075"],"synonyms":[{"name":"absent gastric acidity","type":"related"},{"name":"achlorhydria","type":"exact"},{"name":"achylia gastrica","type":"related"},{"name":"gastric anacidity","type":"related"},{"name":"hypochlorhydria","type":"related"}],"termid":"MONDO:0043465","xrefs":{"Monarch":{"xref_id":"0043465"}}}


id: GO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in sensory perception in which a sensory stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"},{"relation_name":"part_of","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus involved in sensory perception","secondary_identifiers":["Wikipedia:Transduction_(physiology)"],"synonyms":[{"name":"sensory detection of stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of stimulus","type":"exact"},{"name":"sensory perception, stimulus detection","type":"exact"},{"name":"sensory transduction","type":"exact"}],"termid":"GO:0050906"}


id: GO:0098963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098963"}


id: PR:P41000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cps3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cps3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.02","synonyms":[{"name":"Spom972h-cps3","type":"exact"},{"name":"meiotically up-regulated gene 188 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41000"}


id: PBO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 10","termid":"PBO:0044144"}


id: FYPO:0004778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal farnesyltranstransferase activity","termid":"FYPO:0004777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased farnesyltranstransferase activity","synonyms":[{"name":"reduced farnesyltranstransferase activity","type":"exact"}],"termid":"FYPO:0004778"}


id: GO:0006654
data:
  {"annotated_genes":["SJAG_02654","SJAG_01519","SJAG_01036","SJAG_04323","SJAG_01957","SJAG_04883","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63066,72859,73249,73426,79541,94950,106853],"is_not":false,"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidic acid metabolic process","termid":"GO:0046473"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_02654":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483166"],"synonyms":[{"name":"phosphatidic acid anabolism","type":"exact"},{"name":"phosphatidic acid biosynthesis","type":"exact"},{"name":"phosphatidic acid formation","type":"exact"},{"name":"phosphatidic acid synthesis","type":"exact"}],"termid":"GO:0006654","terms_by_termid":{"GO:0006654":null}}


id: PBO:0091566
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Related Protein","termid":"PBO:0091566"}


id: PBO:0080369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanin 3, pseudogene","termid":"PBO:0080369"}


id: GO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime biosynthetic process","synonyms":[{"name":"Z-phenylacetaldoxime anabolism","type":"exact"},{"name":"Z-phenylacetaldoxime biosynthesis","type":"exact"},{"name":"Z-phenylacetaldoxime formation","type":"exact"},{"name":"Z-phenylacetaldoxime synthesis","type":"exact"}],"termid":"GO:0046307"}


id: PBO:0028674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_plasma_membrane_to_vacuole_transport_after_nitrogen_starvation","termid":"PBO:0028674"}


id: GO:0000294
data:
  {"annotated_genes":["SJAG_03234","SJAG_03952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75361,106736],"is_not":false,"summary":null,"term":"GO:0000294"}]},"cv_name":"biological_process","definition":"A minor MRP-dependent nuclear-transcribed mRNA degradation pathway that begins with an endonucleolytic cleavage to generate unprotected ends.","definition_xrefs":["PMID:14729943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03234":null,"SJAG_03952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, RNase MRP-dependent","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process, endonucleolytic cleavage-dependent decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay","type":"related"}],"termid":"GO:0000294","terms_by_termid":{"GO:0000294":null}}


id: PATO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per kilogram of solvent.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Osmolarity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osmolality","termid":"PATO:0002027"}


id: PBO:0090790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly ATPase Rix7","termid":"PBO:0090790"}


id: PBO:0038322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_disease_name","termid":"PBO:0038322"}


id: GO:0048629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process of establishing the non-random spatial arrangement of trichomes on the surface and margin of a leaf. Process involves signaling between adjacent epidermal cells that results in differentiation of some epidermal cells into trichomes.","definition_xrefs":["ISBN:0865427429","PMID:10368181","GOC:sm","GOC:mtg_sensu","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trichome patterning","synonyms":[{"name":"trichome distribution","type":"broad"},{"name":"trichome pattern biosynthesis","type":"exact"},{"name":"trichome pattern formation","type":"exact"},{"name":"trichome pattern specification","type":"related"},{"name":"trichome spacing","type":"exact"}],"termid":"GO:0048629"}


id: GO:0102328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + a 3-oxoacid = carbon dioxide + a methylketone.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacid decarboxylase activity (obsolete GO:0102328)","termid":"GO:0102328"}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: GO:0052627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vanillate + L-glutamate + ATP = N-vanillate-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["MetaCyc:RXN-10885","PMID:19189963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"N-vanillate-L-glutamate synthetase activity","synonyms":[{"name":"vanillate amino acid synthetase activity","type":"broad"}],"termid":"GO:0052627"}


id: PBO:0068831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 69, pseudogene","termid":"PBO:0068831"}


id: GO:1901107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving granaticin.","definition_xrefs":["UniPathway:UPA00175","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"granaticin metabolic process","synonyms":[{"name":"granaticin metabolism","type":"exact"}],"termid":"GO:1901107"}


id: PBO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Bulleromyces albus DPS1","termid":"PBO:0036385"}


id: PBO:0059852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 5","termid":"PBO:0059852"}


id: GO:0034097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokine","secondary_identifiers":["Reactome:R-HSA-9645135"],"synonyms":[{"name":"response to cytokine stimulus","type":"exact"}],"termid":"GO:0034097"}


id: GO:2000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 type immune response","synonyms":[{"name":"regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000316"}


id: MONDO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Genochondromatosis is characterized by chondromatosis, typically involving the clavicles, upper end of the humerus, and lower end of the femur. Lesions are bilateral and symmetrical. It has been described four patients from the same family and is transmitted as an autosomal dominant trait. Another disorder, genochondromatosis II, shows strong similarities to genochondromatosis but is characterized by the involvement of the short tubular bones and by normal clavicles. It has been described in one unrelated family. Genochondromatosis II may also be inherited as an autosomal dominant trait. Genochondromatosis has a benign clinical course.","definition_xrefs":["Orphanet:85197"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"genochondromatosis","termid":"MONDO:0007653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genochondromatosis type 1","secondary_identifiers":["GARD:16741","icd11.foundation:521879469","MEDGEN:1761731","UMLS:C5438970"],"termid":"MONDO:0019411","xrefs":{"Monarch":{"xref_id":"0019411"}}}


id: PBO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin (predicted)","termid":"PBO:0004951"}


id: GO:0043756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide + H2O = (R)-1-aminopropan-2-ol + adenosylcobyrate.","definition_xrefs":["EC:3.5.1.90","RHEA:23504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"adenosylcobinamide hydrolase activity","secondary_identifiers":["KEGG_REACTION:R05226","MetaCyc:R346-RXN"],"synonyms":[{"name":"AdoCbi amidohydrolase activity","type":"related"},{"name":"AdoCbi hydrolase activity","type":"related"},{"name":"CbiZ","type":"related"},{"name":"adenosylcobinamide amidohydrolase activity","type":"related"}],"termid":"GO:0043756"}


id: MONDO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the brain stem.","definition_xrefs":["NCIT:C3570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"brainstem neoplasm","termid":"MONDO:0021228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brainstem cancer","secondary_identifiers":["SCTID:363473003","MESH:D020295","DOID:4203","ICD9:191.7","MEDGEN:57566","NCIT:C5967","UMLS:C0153641"],"synonyms":[{"name":"brain stem cancer","type":"related"},{"name":"brainstem cancer","type":"exact"},{"name":"cancer of brainstem","type":"exact"},{"name":"malignant brain stem neoplasm","type":"broad"},{"name":"malignant brain stem tumor","type":"broad"},{"name":"malignant brain stem tumour","type":"broad"},{"name":"malignant brainstem neoplasm","type":"broad"},{"name":"malignant brainstem tumor","type":"broad"},{"name":"malignant brainstem tumour","type":"broad"},{"name":"malignant neoplasm of brain stem","type":"exact"},{"name":"malignant neoplasm of brainstem","type":"exact"},{"name":"malignant neoplasm of the brain stem","type":"exact"},{"name":"malignant neoplasm of the brainstem","type":"exact"},{"name":"malignant tumor of brain stem","type":"exact"},{"name":"malignant tumor of brainstem","type":"exact"},{"name":"malignant tumor of the brain stem","type":"exact"},{"name":"malignant tumor of the brainstem","type":"exact"},{"name":"malignant tumour of brain stem","type":"exact"},{"name":"malignant tumour of brainstem","type":"exact"},{"name":"malignant tumour of the brain stem","type":"exact"},{"name":"malignant tumour of the brainstem","type":"exact"},{"name":"neoplasm of adult brain stem","type":"broad"},{"name":"neoplasm of brain stem","type":"broad"},{"name":"primary brain stem neoplasm","type":"broad"},{"name":"primary brain stem tumor","type":"broad"},{"name":"primary brain stem tumour","type":"broad"},{"name":"tumor of the brainstem","type":"broad"},{"name":"tumour of adult brainstem","type":"broad"},{"name":"tumour of the brainstem","type":"broad"}],"termid":"MONDO:0002912","xrefs":{"Monarch":{"xref_id":"0002912"}}}


id: GO:1990716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the 9+2 axoneme, that occurs in most motile cilia, consisting of the pair of two single central microtubules and their associated structures which include the central pair projections, the central pair bridges linking the two tubules, and the central pair caps which are attached to the distal or plus ends of the microtubules.","definition_xrefs":["PMID:9295136","PMID:21586547","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal central apparatus","termid":"GO:1990716"}


id: FYPO:0002878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription during glucose starvation","synonyms":[{"name":"increased transcription during cellular response to glucose starvation","type":"exact"},{"name":"increased transcription during glucose depletion","type":"exact"},{"name":"increased transcription during glucose deprivation","type":"exact"},{"name":"increased transcription during glucose limitation","type":"related"},{"name":"increased transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0002878"}


id: PBO:0061338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein pseudogene 1","termid":"PBO:0061338"}


id: PBO:0040971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 42","termid":"PBO:0040971"}


id: PBO:0050308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 10","termid":"PBO:0050308"}


id: GO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanocyte-stimulating hormone, any of three peptide hormones that are produced by the intermediate lobe of the pituitary gland and, upon receptor binding, cause dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"melanocyte-stimulating hormone activity","synonyms":[{"name":"alpha-melanocyte stimulating hormone activity","type":"narrow"},{"name":"alpha-melanophore stimulating hormone activity","type":"narrow"},{"name":"melanocyte stimulating hormone activity","type":"exact"}],"termid":"GO:0017044"}


id: GO:0032572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a menaquinone (vitamin K2) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin K","termid":"GO:0032571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to menaquinone","synonyms":[{"name":"response to menatetrenone","type":"exact"},{"name":"response to vitamin K2","type":"exact"}],"termid":"GO:0032572"}


id: MONDO:0015802
data:
  {"annotated_genes":["SJAG_00741","SJAG_03698","SJAG_04179","SJAG_00210","SJAG_01900","SJAG_01926","SJAG_00800","SJAG_03418","SJAG_02282","SJAG_01146","SJAG_00554","SJAG_02920","SJAG_00170","SJAG_01778","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030914"},{"annotations":[88869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032823"},{"annotations":[88371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032485"},{"annotations":[88202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957536"},{"annotations":[88014,88015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013266"},{"annotations":[87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014842"},{"annotations":[87215,87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030912"},{"annotations":[86950,86951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030916"},{"annotations":[86948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030917"},{"annotations":[86922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030921"},{"annotations":[86928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030922"},{"annotations":[88184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020847"}]},"cv_name":"mondo","definition":"Autosomal dominant form of non-syndromic intellectual disability.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic intellectual disability","termid":"MONDO:0000509"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00210":null,"SJAG_00554":null,"SJAG_00741":null,"SJAG_00800":null,"SJAG_01146":null,"SJAG_01778":null,"SJAG_01900":null,"SJAG_01926":null,"SJAG_02218":null,"SJAG_02282":null,"SJAG_02920":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_04179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant non-syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060307","UMLS:C5680502","MEDGEN:1826082","GARD:12107","Orphanet:178469"],"synonyms":[{"name":"autosomal dominant mental retardation","type":"broad"},{"name":"autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant non-syndromic mental retardation","type":"exact"},{"name":"non-syndromic intellectual disability, autosomal dominant","type":"exact"}],"termid":"MONDO:0015802","terms_by_termid":{"MONDO:0013266":null,"MONDO:0014842":null,"MONDO:0020847":null,"MONDO:0030912":null,"MONDO:0030914":null,"MONDO:0030916":null,"MONDO:0030917":null,"MONDO:0030921":null,"MONDO:0030922":null,"MONDO:0032485":null,"MONDO:0032823":null,"MONDO:0957536":null},"xrefs":{"Monarch":{"xref_id":"0015802"}}}


id: PBO:0046098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 1","termid":"PBO:0046098"}


id: SO:1001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001267 stop_codon_readthrough (obsolete SO:1001267)","termid":"SO:1001267"}


id: PBO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B","termid":"PBO:0043207"}


id: PBO:0045586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 8","termid":"PBO:0045586"}


id: MOD:01738
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01738"}


id: FYPO:0004598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G2 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G2 phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004598"}


id: MONDO:1010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any painful thickening of the footpads with severe keratinous proliferations and fissures that occurs in dogs due to a mutation in the KRT16 gene.","definition_xrefs":["PMID:25521457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal nonepidermolytic palmoplantar keratoderma, KRT16-related, dog","secondary_identifiers":["OMIA:002088-9615"],"synonyms":[{"name":"palmoplantar keratoderma, nonepidermolytic, focal 1, dog","type":"related"}],"termid":"MONDO:1010790","xrefs":{"Monarch":{"xref_id":"1010790"}}}


id: PBO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member C","termid":"PBO:0047986"}


id: GO:0044582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butanol.","definition_xrefs":["GOC:tt","GOC:mengo_curators","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"1-butanol biosynthetic process","termid":"GO:0071271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006629","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butanol","synonyms":[{"name":"butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:0044582"}


id: PBO:0054471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1871","termid":"PBO:0054471"}


id: MONDO:0016124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug and/or toxic myopathy (obsolete MONDO:0016124)","secondary_identifiers":["Orphanet:206985"],"termid":"MONDO:0016124","xrefs":{"Monarch":{"xref_id":"0016124"}}}


id: GO:0009651
data:
  {"annotated_genes":["SJAG_00661","SJAG_04567","SJAG_02389","SJAG_03815","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62861,81452,112003],"is_not":false,"summary":null,"term":"GO:0009651"},{"annotations":[91392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[102110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02389":null,"SJAG_02883":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"response to ionic osmotic stress","type":"exact"},{"name":"salinity response","type":"exact"}],"termid":"GO:0009651","terms_by_termid":{"GO:0009651":null,"GO:0071472":null,"GO:0071473":null}}


id: GO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a plasma membrane and consisting of proteoglycan. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan integral to plasma membrane (obsolete GO:0005888)","synonyms":[{"name":"proteoglycan integral to plasma membrane","type":"exact"}],"termid":"GO:0005888"}


id: MONDO:0004362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placenta disease (obsolete MONDO:0004362)","termid":"MONDO:0004362","xrefs":{"Monarch":{"xref_id":"0004362"}}}


id: MONDO:0009095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatoosteolysis, Kirghizian type, is characterized by recurrent skin ulceration, arthralgia, fever, peri-articular osteolysis, oligodontia and nail dystrophy. This disease has been described in five sibs in a family of Kirghizian origin (Central Asia). Three of the sibs also presented with keratitis leading to visual impairment or blindess. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:1657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatoosteolysis, Kirghizian type","secondary_identifiers":["MEDGEN:341742","GARD:1814","icd11.foundation:2019080941","MESH:C535373","OMIM:221810","SCTID:721090002","UMLS:C1857301"],"synonyms":[{"name":"Dermatoosteolysis Kirghizian type","type":"related"},{"name":"Kirghizian Dermatoosteolysis","type":"related"},{"name":"autosomal recessive syndrome of skin ulceration, arthroosteolysis with pseudoacromegaly, keratitis, and oligodontia","type":"related"},{"name":"dermatoosteolysis, Kirghizian type","type":"exact"}],"termid":"MONDO:0009095","xrefs":{"Monarch":{"xref_id":"0009095"}}}


id: GO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"part_of","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid antigen transport","termid":"GO:0002494"}


id: PBO:0034068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecular_interaction_relation_helper_property","termid":"PBO:0034068"}


id: PBO:0069367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 627, pseudogene","termid":"PBO:0069367"}


id: PBO:0084557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma","termid":"PBO:0084557"}


id: GO:1900003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine-type endopeptidase activity","synonyms":[{"name":"regulation of blood coagulation factor activity","type":"related"}],"termid":"GO:1900003"}


id: GO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation and development of the equator that forms the boundary between the photoreceptors in the dorsal sector of the eye and those in the ventral sector, dividing the eye into dorsal and ventral halves.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"equator specification","termid":"GO:0045317"}


id: GO:0009735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokinin","synonyms":[{"name":"response to cytokinin stimulus","type":"exact"}],"termid":"GO:0009735"}


id: PBO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 9","termid":"PBO:0046628"}


id: PBO:0026972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026972"}


id: PBO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q21)","termid":"PBO:0047885"}


id: PBO:0083781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083781"}


id: PBO:0085012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 Ppz1p; involved in coenzyme A biosynthesis; subunit of the phosphopantothenoylcysteine decarboxylase (PPCDC; Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p)","termid":"PBO:0085012"}


id: PBO:0117422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 17","termid":"PBO:0117422"}


id: PBO:0034164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_participant","termid":"PBO:0034164"}


id: PBO:0078637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 11","termid":"PBO:0078637"}


id: GO:2000212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"negatively_regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate metabolic process","synonyms":[{"name":"negative regulation of glutamate metabolism","type":"exact"},{"name":"negative regulation of glutamic acid metabolic process","type":"exact"},{"name":"negative regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000212"}


id: GO:1902167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902231"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"}],"termid":"GO:1902167"}


id: PR:O74455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconolactonase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04412","PANTHER:PTHR11054:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.10","secondary_identifiers":["UniProtKB:O74455"],"synonyms":[{"name":"6PGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGLS","type":"exact"}],"termid":"PR:O74455"}


id: MOD:01336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE - identical and redundant with MOD:00657. Remap to MOD:00657.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01336 deamidation followed by a methylation -site Q (obsolete MOD:01336)","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01336"}


id: MONDO:0009931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary atresia with intact ventricular septum (PA-IVS) is a rare form of cyanotic congenital heart malformation characterized by severe cyanosis and tachypnea. PA-IVS presents significant morphologic diversity: at the end of the spectrum are patients with a mildly hypoplastic and tripartite right ventricle (RV) and mild tricuspid valve (TV) hypoplasia, and at the other end are patients with severe RV and TV hypoplasia, often with RV-dependent coronary circulation.","definition_xrefs":["Orphanet:1208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypoplastic right heart syndrome","termid":"MONDO:0020291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary atresia-intact ventricular septum syndrome","secondary_identifiers":["NANDO:2200253","MEDGEN:87491","NCIT:C99032","NANDO:1200707","UMLS:C0344975","OMIM:265150","MESH:C562832","GARD:4600","SCTID:253590009","icd11.foundation:131289265"],"synonyms":[{"name":"pulmonary atresia with intact ventricular septum","type":"related"},{"name":"pulmonary valve atresia with intact ventricular septum","type":"exact"}],"termid":"MONDO:0009931","xrefs":{"Monarch":{"xref_id":"0009931"}}}


id: PBO:0067989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 291","termid":"PBO:0067989"}


id: PBO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit","termid":"PBO:0032732"}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: PBO:0083027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 45","termid":"PBO:0083027"}


id: PBO:0113485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene is absent from the reference genome, but present in various other strains' genomes; similar to MAL63","termid":"PBO:0113485"}


id: PBO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.11","termid":"PBO:0001930"}


id: GO:0098915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the ventricular cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0098915"}


id: PBO:0041082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"break repair meiotic recombinase recruitment factor 1","termid":"PBO:0041082"}


id: PBO:0074568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 22","termid":"PBO:0074568"}


id: PBO:0055859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 5 like (pseudogene)","termid":"PBO:0055859"}


id: GO:0016514
data:
  {"annotated_genes":["SJAG_02869","SJAG_04005","SJAG_00735","SJAG_00739","SJAG_00743","SJAG_02254","SJAG_02589","SJAG_01016","SJAG_02447","SJAG_03576","SJAG_05313","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71653,73092,74452,78127,78824,79460,89524,96028,97804,109417,115137,117028],"is_not":false,"summary":null,"term":"GO:0016514"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.","definition_xrefs":["PMID:12672490","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_02254":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_02869":null,"SJAG_03576":null,"SJAG_04005":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SWI/SNF complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SWI-SNF complex","type":"exact"}],"termid":"GO:0016514","terms_by_termid":{"GO:0016514":null}}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["PMID:16048999","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: PBO:0054788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2201","termid":"PBO:0054788"}


id: PBO:0082882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyanamide hydratase that detoxifies cyanamide; member of the HD domain metalloprotein superfamily; expression is induced over 100-fold by cyanamide and by SN2-type DNA alkylating agents such as MMS and DMA; induction decreased in rad6 and rad18 mutants; gene and protein are identical to DDI3 and Ddi3p","termid":"PBO:0082882"}


id: PBO:0116996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GZMH and GMZB antisense RNA 1","termid":"PBO:0116996"}


id: MONDO:0006440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic mastocytosis with associated clonal hematological non-mast-cell lineage disease (obsolete MONDO:0006440)","termid":"MONDO:0006440","xrefs":{"Monarch":{"xref_id":"0006440"}}}


id: GO:1990331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex capable of acetyltransferase activity. It can catalyze the transfer of an acetyl group from acetyl-CoA to an acceptor residue on histone H-3, histone H-4, or on polyamines. The complex is also capable of acetylating certain small basic proteins. The two Hpa2 dimers that make up the tetramer are held together by interactions between the bound acetyl-CoA molecules.","definition_xrefs":["PMID:10600387","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Hpa2 acetyltransferase complex","termid":"GO:1990331"}


id: MONDO:0700116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disorder caused by biallelic variants in NDE1 that is characterized by extreme microcephaly (typically head circumference of more than 10 standard deviations (SD) below the mean), profound motor and intellectual disability, spasticity, and incomplete cerebral formation. Radiologic studies demonstrate overt microcephaly with cortical dysgenesis ranging from simplification to pachygyria/lissencephaly to hydranencephaly. Agenesis of the corpus callosum as well as hypoplasia of the brainstem and cerebellum are typically present.","definition_xrefs":["PMID:21529751","PMID:22526350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116","xrefs":{"Monarch":{"xref_id":"0700116"}}}


id: GO:0060277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stop, prevents or decreases transcription as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0060277)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter during G1 phase of mitotic cell cycle","type":"related"},{"name":"negative regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0060277"}


id: PBO:0090270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase (H3-K36 specific), Jmjc domain Epe1","termid":"PBO:0090270"}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: PBO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response Dcr2 (predicted)","termid":"PBO:0036519"}


id: MONDO:0019531
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88714],"is_not":false,"summary":null,"term":"MONDO:0019531"}]},"cv_name":"mondo","definition":"Haemolytic anemia due to glutathione reductase (GSR) deficiency is characterized by nearly complete absence of GSR activity in erythrocytes.","definition_xrefs":["Orphanet:90030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280","MONDO:0019241"],"is_obsolete":false,"name":"hemolytic anemia due to glutathione reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MONDO:0032856","OMIM:618660","UMLS:C5231513","MEDGEN:1684855","GARD:16784"],"synonyms":[{"name":"hemolytic anemia due to glutathione reductase deficiency","type":"exact"}],"termid":"MONDO:0019531","terms_by_termid":{"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019531"}}}


id: PBO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 11","termid":"PBO:0070858"}


id: PBO:0005393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set9","termid":"PBO:0005393"}


id: PBO:0042540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 7 pseudogene 1","termid":"PBO:0042540"}


id: PBO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 22 pseudogene","termid":"PBO:0042647"}


id: GO:0015517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + H+(out) = galactose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.9","TC:2.A.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"galactose:proton symporter activity","synonyms":[{"name":"galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:hydrogen symporter activity","type":"broad"}],"termid":"GO:0015517"}


id: PBO:0046468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 2","termid":"PBO:0046468"}


id: PBO:0089134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"client-loading PAQosome cofactor","termid":"PBO:0089134"}


id: MONDO:1010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pityriasis rosea that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pityriasis rosea, non-human animal","termid":"MONDO:1010134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pityriasis rosea, pig","secondary_identifiers":["OMIA:000801-9823"],"termid":"MONDO:1010760","xrefs":{"Monarch":{"xref_id":"1010760"}}}


id: PR:O94718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ipi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein ipi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.06c","synonyms":[{"name":"Spom972h-ipi1","type":"exact"}],"termid":"PR:O94718"}


id: PBO:0055890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 9","termid":"PBO:0055890"}


id: FYPO:0003013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring disassembly is abnormal. Contractile ring disassembly is the part of cytokinesis in which the actomyosin contractile ring is disaggregated into its constituent components.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0004803","FYPO:0000032"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring disassembly","synonyms":[{"name":"abnormal actomyosin contractile ring disassembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring disassembly during vegetative growth","type":"exact"},{"name":"abnormal contractile ring disassembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring disassembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring disassembly","type":"exact"},{"name":"abnormal cytokinetic ring disassembly","type":"related"},{"name":"abnormal mitotic actomyosin contractile ring disassembly","type":"exact"},{"name":"abnormal mitotic contractile ring disassembly","type":"exact"}],"termid":"FYPO:0003013"}


id: GO:2001144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001144)","termid":"GO:2001144"}


id: PBO:0026894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026894"}


id: MONDO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell rhabdomyosarcoma occurring in children.","definition_xrefs":["NCIT:C123397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell rhabdomyosarcoma","termid":"MONDO:0002581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood spindle cell rhabdomyosarcoma","secondary_identifiers":["MEDGEN:882003","UMLS:C4055242"],"termid":"MONDO:0100067","xrefs":{"Monarch":{"xref_id":"0100067"}}}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["PMID:19100238","GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: MONDO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syphilis that is manifested between 0 and 2 years old.","definition_xrefs":["Wikipedia:Congenital_syphilis#Early"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital syphilis","termid":"MONDO:0005714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early congenital syphilis","secondary_identifiers":["icd11.foundation:108348777","UMLS:C0275859","DOID:0050488","ICD9:090.2","MEDGEN:546894","SCTID:4359001"],"synonyms":[{"name":"Early congenital syphilis (less than 2 years)","type":"broad"}],"termid":"MONDO:0000333","xrefs":{"Monarch":{"xref_id":"0000333"}}}


id: PBO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 111","termid":"PBO:0071109"}


id: GO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium:potassium-exchanging ATPase complex","synonyms":[{"name":"sodium pump","type":"broad"},{"name":"sodium/potassium-exchanging ATPase complex","type":"exact"}],"termid":"GO:0005890"}


id: FYPO:0001770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal tRNA methyltransferase activity","termid":"FYPO:0001770"}


id: PBO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH quinone oxidoreductase/ARE-binding protein (predicted)","termid":"PBO:0005641"}


id: PBO:0039471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18A","termid":"PBO:0039471"}


id: GO:0016749
data:
  {"annotated_genes":["SJAG_00097","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71719,80265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016749","terms_by_termid":{"GO:0003870":null}}


id: MONDO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progeroid syndrome (obsolete MONDO:0000146)","termid":"MONDO:0000146","xrefs":{"Monarch":{"xref_id":"0000146"}}}


id: MONDO:1011651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and juvenile mortality, non-human animal","secondary_identifiers":["OMIA:002256"],"termid":"MONDO:1011651","xrefs":{"Monarch":{"xref_id":"1011651"}}}


id: PBO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposition","termid":"PBO:0031615"}


id: GO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains. In Saccharomyces cerevisiae, the complex comprises Ubc13p and Mms2p; in human it comprises UBE2N and UBE2V1/UBE2V2; and in plants UBC35/UBC36 and UEV1A/UEV1B/UEV1C/UEV1D-4.","definition_xrefs":["PMID:15772086","PMID:16129784","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"UBC13-MMS2 complex","synonyms":[{"name":"BEN-UEV1A complex","type":"exact"},{"name":"UBE2N/UBE2NL complex","type":"narrow"},{"name":"UBE2V1/UBE2V2 complex","type":"narrow"},{"name":"Uev1A-ben complex","type":"narrow"},{"name":"ubc-13-uev-1 complex","type":"narrow"}],"termid":"GO:0031372"}


id: PBO:0025527
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression of human CDKN1A causes mitotic cell cycle arrest in G2, via interaction with PCNA","termid":"PBO:0025527"}


id: GO:0097627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ornithine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine transmembrane transporter activity","termid":"GO:0000064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity L-ornithine transmembrane transporter activity","synonyms":[{"name":"high affinity L-ornithine transmembrane transporter activity","type":"exact"}],"termid":"GO:0097627"}


id: FYPO:0007236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at early replication origins (i.e. origins that normally fire early in S phase) begins later than normal.","definition_xrefs":["PMID:22279046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to chromatin at replication origin","termid":"FYPO:0006734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at early replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at early replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at early origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at early replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at early replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at early replication origin","type":"exact"}],"termid":"FYPO:0007236"}


id: PBO:0069257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 512, pseudogene","termid":"PBO:0069257"}


id: FYPO:0003238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"decreased anaerobic cell population growth","synonyms":[{"name":"decreased anaerobic vegetative cell population growth","type":"exact"},{"name":"reduced anaerobic cell population growth","type":"exact"}],"termid":"FYPO:0003238"}


id: PBO:0005636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine synthase Pps1","termid":"PBO:0005636"}


id: PBO:0072611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 6","termid":"PBO:0072611"}


id: MONDO:0008346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A respiratory disease due to repeated episodes of diffuse alveolar hemorrhage without any underlying apparent cause, most often in children. Anemia, cough, and pulmonary infiltrates on chest radiographs are found in majority of the patients.","definition_xrefs":["Orphanet:99931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemosiderosis","termid":"MONDO:0001436"},{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"pulmonary hemosiderosis","secondary_identifiers":["MESH:D012806","ICD10EXP:E83.1+","UMLS:C0020807","GARD:6763","DOID:10328","SCTID:40527005","ICD10EXP:J99.8*","NANDO:2200207","MEDGEN:9403","ICD9:516.1","OMIM:178550","icd11.foundation:1542272036","DOID:12118","NANDO:1200751","NANDO:2100037","NORD:91174"],"synonyms":[{"name":"Idiopathic Pulmonary Hemosiderosis","type":"exact"},{"name":"alveolar hypoventilation syndrome","type":"related"},{"name":"brown induration","type":"exact"},{"name":"brown lung","type":"exact"},{"name":"idiopathic pulmonary hemosiderosis","type":"exact"},{"name":"pulmonary hemosiderosis","type":"exact"},{"name":"pulmonary siderosis","type":"exact"},{"name":"siderosis","type":"related"}],"termid":"MONDO:0008346","xrefs":{"Monarch":{"xref_id":"0008346"}}}


id: PBO:0052948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation associated protein","termid":"PBO:0052948"}


id: MONDO:0030983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome, IIa 2F","secondary_identifiers":["MEDGEN:1809587","OMIM:619947","UMLS:C5677013"],"synonyms":[{"name":"WS2F","type":"exact"},{"name":"Waardenburg syndrome, IIa 2F","type":"exact"}],"termid":"MONDO:0030983","xrefs":{"Monarch":{"xref_id":"0030983"}}}


id: GO:0106357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:21412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase (NAD+) activity","synonyms":[{"name":"glycerol-1-phosphate dehydrogenase [NAD+] activity","type":"exact"}],"termid":"GO:0106357"}


id: PBO:0017091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 6","termid":"PBO:0017091"}


id: PBO:0079069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-3","termid":"PBO:0079069"}


id: GO:0044344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an fibroblast growth factor stimulus.","definition_xrefs":["GOC:yaf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to fibroblast growth factor","termid":"GO:0071774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fibroblast growth factor stimulus","synonyms":[{"name":"cellular response to FGF stimulus","type":"exact"}],"termid":"GO:0044344"}


id: GO:0034727
data:
  {"annotated_genes":["SJAG_04655","SJAG_03100","SJAG_02100","SJAG_01382","SJAG_03718","SJAG_00355","SJAG_01722","SJAG_00004","SJAG_05017","SJAG_00645","SJAG_01274","SJAG_04502","SJAG_01135","SJAG_06309","SJAG_01283","SJAG_04232","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72140,73204,73843,74040,74328,74455,74864,74877,75066,75190,76110,78679,78793,81398,81479,81510,81888],"is_not":false,"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"Degradation of a cell nucleus by microautophagy.","definition_xrefs":["GOC:jp","PMID:18701704","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"nucleophagy","termid":"GO:0044804"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"piecemeal microautophagy of the nucleus","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PMN","type":"exact"}],"termid":"GO:0034727","terms_by_termid":{"GO:0034727":null}}


id: PBO:0049844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 5B","termid":"PBO:0049844"}


id: GO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.4.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016643"}


id: PBO:0027857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_prophase_I","termid":"PBO:0027857"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: PBO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp105","termid":"PBO:0004504"}


id: PATO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000512 relative disease sensitivity value (obsolete PATO:0000512)","termid":"PATO:0000512"}


id: PBO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 3","termid":"PBO:0043135"}


id: PBO:0075092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 141B","termid":"PBO:0075092"}


id: MONDO:0011623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia, autosomal recessive 1 (obsolete MONDO:0011623)","termid":"MONDO:0011623","xrefs":{"Monarch":{"xref_id":"0011623"}}}


id: PBO:0087129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein; promotes elongation, regulates termination, and carries poly(A) mRNA from nucleus to cytoplasm; represses translation initiation by binding eIF4G; required for pre-mRNA splicing; interacts with E3 ubiquitin ligase Bre1p, linking histone ubiquitination to mRNA processing; may have role in telomere maintenance; dissociation from mRNAs promoted by Mtr10p; phosphorylated by Sky1p in cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0087129"}


id: MONDO:0015277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma arising from the C-cells of the thyroid gland. It is closely associated with multiple endocrine neoplasia syndromes. Approximately 10% to 20% of medullary thyroid carcinomas are familial. Patients usually present with a thyroid nodule that is painless and firm. In the majority of cases nodal involvement is present at diagnosis. Surgery is the preferred treatment for both primary lesions and recurrences. This carcinoma is generally not very sensitive to radiation and almost unresponsive to chemotherapy.","definition_xrefs":["NCIT:C3879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"medullary thyroid gland carcinoma","secondary_identifiers":["SCTID:255032005","UMLS:C0238462","GARD:7004","NANDO:2201054","DOID:3973","ONCOTREE:THME","MEDGEN:66772","icd11.foundation:578519098","Orphanet:1332","HP:0002865","MedDRA:10027101"],"synonyms":[{"name":"C cell carcinoma","type":"exact"},{"name":"MTC","type":"exact"},{"name":"THME","type":"related"},{"name":"carcinoma of parafollicular cell","type":"exact"},{"name":"carcinoma, C-cell, malignant","type":"exact"},{"name":"medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the thyroid","type":"exact"},{"name":"medullary carcinoma of the thyroid gland","type":"exact"},{"name":"medullary carcinoma of thyroid","type":"exact"},{"name":"medullary carcinoma of thyroid gland","type":"exact"},{"name":"medullary thyroid cancer","type":"exact"},{"name":"medullary thyroid cancer (MTC)","type":"related"},{"name":"medullary thyroid carcinoma","type":"exact"},{"name":"medullary thyroid gland carcinoma","type":"exact"},{"name":"parafollicular cell carcinoma","type":"exact"},{"name":"thyroid cancer, medullary","type":"related"},{"name":"thyroid carcinoma, medullary","type":"related"},{"name":"thyroid gland medullary cancer","type":"exact"},{"name":"thyroid gland medullary carcinoma","type":"exact"},{"name":"thyroid gland neuroendocrine carcinoma","type":"exact"},{"name":"thyroid medullary carcinoma","type":"exact"},{"name":"ultimobranchial thyroid tumor","type":"exact"},{"name":"ultimobranchial thyroid tumour","type":"exact"}],"termid":"MONDO:0015277","xrefs":{"Monarch":{"xref_id":"0015277"}}}


id: PBO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; has a putative RNA binding domain; in mammals the corresponding protein, eIF2D, has been shown to possess translation initiation factor activity","termid":"PBO:0086058"}


id: GO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"galactosylceramidase activity","secondary_identifiers":["MetaCyc:GALACTOSYLCERAMIDASE-RXN","Reactome:R-HSA-1606564","RHEA:14297"],"synonyms":[{"name":"D-galactosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"beta-galactocerebrosidase activity","type":"related"},{"name":"beta-galactosylceramidase activity","type":"related"},{"name":"ceramide galactosidase activity","type":"related"},{"name":"cerebroside beta-galactosidase activity","type":"related"},{"name":"cerebroside galactosidase activity","type":"related"},{"name":"galactocerebrosidase activity","type":"related"},{"name":"galactocerebroside beta-galactosidase activity","type":"related"},{"name":"galactocerebroside galactosidase activity","type":"related"},{"name":"galactocerebroside-beta-D-galactosidase activity","type":"related"},{"name":"galactosylceramidase I","type":"related"},{"name":"galactosylceramide beta-galactosidase activity","type":"related"},{"name":"galactosylcerebrosidase activity","type":"related"},{"name":"galcerase activity","type":"related"},{"name":"lactosylceramidase I","type":"related"},{"name":"lactosylceramidase activity","type":"related"}],"termid":"GO:0004336"}


id: PBO:0072951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase cancer associated transcript 2","termid":"PBO:0072951"}


id: PBO:0084666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial adenylate kinase; catalyzes the reversible synthesis of GTP and AMP from GDP and ADP; may serve as a back-up for synthesizing GTP or ADP depending on metabolic conditions; 3' sequence of ADK2 varies with strain background","termid":"PBO:0084666"}


id: PBO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 5","termid":"PBO:0047337"}


id: PBO:0084562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane bound guanine nucleotide exchange factor; also known as a GEF or GDP-release factor; indirectly regulates adenylate cyclase through activation of Ras1p and Ras2p by stimulating the exchange of GDP for GTP; required for progression through G1; thermosensitivity of the cdc25-5 mutant is functionally complemented by human RASGRF1 or by a fragment of human SOS1 comprising the CDC25-related catalytic domain","termid":"PBO:0084562"}


id: GO:0010309
data:
  {"annotated_genes":["SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73150],"is_not":false,"summary":null,"term":"GO:0010309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + O2 = 4-methylthio-2-oxobutanoate + formate + H+.","definition_xrefs":["RHEA:24504","EC:1.13.11.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acireductone dioxygenase [iron(II)-requiring] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:R147-RXN","Reactome:R-HSA-1237119","KEGG_REACTION:R07364"],"synonyms":[{"name":"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase activity","type":"exact"},{"name":"1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate-forming)","type":"related"},{"name":"2-hydroxy-3-keto-5-thiomethylpent-1-ene dioxygenase","type":"broad"},{"name":"ARD'","type":"related"},{"name":"ARD1","type":"related"},{"name":"E-2'","type":"related"},{"name":"aci-reductone dioxygenase","type":"broad"},{"name":"acireductone dioxygenase (Fe2+-requiring) activity","type":"exact"},{"name":"acireductone dioxygenase activity","type":"broad"}],"termid":"GO:0010309","terms_by_termid":{"GO:0010309":null}}


id: PBO:0090234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex scaffold subunit 1","termid":"PBO:0090234"}


id: PBO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit","termid":"PBO:0001082"}


id: PBO:0059173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I-related","termid":"PBO:0059173"}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: GO:0019617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield oxaloacetate and pyruvate.","definition_xrefs":["MetaCyc:P184-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate catabolic process","termid":"GO:0019619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"protocatechuate catabolic process, meta-cleavage","synonyms":[{"name":"3,4-dihydroxybenzoate catabolic process, meta-cleavage","type":"related"},{"name":"protocatechuate breakdown, meta-cleavage","type":"exact"},{"name":"protocatechuate catabolic process to oxaloacetate and pyruvate","type":"exact"},{"name":"protocatechuate degradation, meta-cleavage","type":"exact"}],"termid":"GO:0019617"}


id: GO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will differentiate into a neuroblast.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuroblast differentiation","termid":"GO:0014016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate commitment","termid":"GO:0014017"}


id: GO:0102968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeranial + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"10-hydroxygeranial oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9369"],"termid":"GO:0102968"}


id: MONDO:0040870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of polydipsia characterized by excessive fluid intake in the absence of physiological stimuli to drink.","definition_xrefs":["Wikipedia:Primary_polydipsia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary polydipsia","termid":"MONDO:0040870","xrefs":{"Monarch":{"xref_id":"0040870"}}}


id: CHEBI:63041
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A manganese coordination entity in which manganese(II) is coordinated to two chloride ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese(II) chloride","termid":"CHEBI:63041"}


id: MONDO:0956995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IDH-mutant anaplastic astrocytoma that is characterized by the presence of increased mitotic activity and anaplastic features.","definition_xrefs":["DOID:0081257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IDH-mutant anaplastic astrocytoma","termid":"MONDO:0850332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"astrocytoma, IDH-mutant, grade 3","secondary_identifiers":["NCIT:C129290","UMLS:C4289981","MEDGEN:927513"],"termid":"MONDO:0956995","xrefs":{"Monarch":{"xref_id":"0956995"}}}


id: GO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"serotonin secretion by basophil","synonyms":[{"name":"serotonin release by basophil","type":"related"}],"termid":"GO:0002556"}


id: MONDO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign neoplasm that arises from the breast. It presents as a single, firm, and painless mass. It is characterized by the presence of neoplastic cells with eosinophilic granular cytoplasm.","definition_xrefs":["NCIT:C40400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast granular cell tumor","secondary_identifiers":["DOID:3011","MEDGEN:307309","UMLS:C1511312"],"synonyms":[{"name":"breast granular cell tumor","type":"exact"},{"name":"granular cell tumor of breast","type":"exact"},{"name":"granular cell tumour of breast","type":"exact"}],"termid":"MONDO:0002487","xrefs":{"Monarch":{"xref_id":"0002487"}}}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: FYPO:0007179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is detected abnormally distributed throughout the cell cortex during interphase of the mitotic cell cycle. The protein may normally be restricted to part of the cell cortex, or not normally located in the cell cortex at all.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized protein distributed in cell cortex during mitotic interphase","synonyms":[{"name":"mislocalised protein distributed in cell cortex during mitotic interphase","type":"exact"},{"name":"mislocalized protein distributed at cell surface during mitotic interphase","type":"related"},{"name":"mislocalized protein distributed in cell cortex during interphase of mitotic cell cycle","type":"exact"},{"name":"mislocalized protein distributed in cell cortex during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007179"}


id: FYPO:0003610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and a branch forms adjacent to an existing septum.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"branched, elongated cell with branch forming adjacent to septum","synonyms":[{"name":"branched, elongated cell with branch forming adjacent to septum during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell with branch forming adjacent to septum during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell with branch forming adjacent to septum","type":"exact"}],"termid":"FYPO:0003610"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: PBO:0027601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_morphology","termid":"PBO:0027601"}


id: GO:0032664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-20 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-20 production","termid":"GO:0032624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-20 production","secondary_identifiers":["GO:0045387"],"synonyms":[{"name":"regulation of IL-20 production","type":"exact"},{"name":"regulation of interleukin-20 biosynthetic process","type":"narrow"}],"termid":"GO:0032664"}


id: GO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"}


id: PR:O60109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho8 gene.","definition_xrefs":["UniProtKB:O60109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.13c","synonyms":[{"name":"Spom972h-pho8","type":"exact"}],"termid":"PR:O60109"}


id: GO:0009827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall organization","termid":"GO:0009664"},{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall modification","synonyms":[{"name":"cellulose and pectin-containing cell wall modification","type":"exact"}],"termid":"GO:0009827"}


id: MONDO:0018903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the striated muscle of mammals by parasites of the genus sarcocystis. Disease symptoms such as vomiting, diarrhea, muscle weakness, and paralysis are produced by sarcocystin, a toxin produced by the organism.","definition_xrefs":["MESH:D012523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcocystosis","secondary_identifiers":["MedDRA:10039483","ICD9:136.5","Orphanet:54368","UMLS:C0036231","MEDGEN:48559","GARD:18848","icd11.foundation:261748740","SCTID:88905005","EFO:0007476","DOID:9640"],"synonyms":[{"name":"sarcosporidiosis","type":"exact"}],"termid":"MONDO:0018903","xrefs":{"Monarch":{"xref_id":"0018903"}}}


id: PATO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compatibility quality inhering in a bearer by virtue of the bearer's being capable of harmonious coexistence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compatibility","termid":"PATO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compatible","termid":"PATO:0000344"}


id: GO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any component or product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:ai","PMID:11884446","GOC:pg","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement receptor activity","secondary_identifiers":["GO:0004942"],"synonyms":[{"name":"anaphylatoxin receptor activity","type":"related"}],"termid":"GO:0004875"}


id: PBO:0027992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027992"}


id: GO:1903027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsonization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rl","PMID:22333221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of opsonization","termid":"GO:1903027"}


id: PBO:0083230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YLL067C","termid":"PBO:0083230"}


id: PBO:0028511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028511"}


id: GO:1903671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["PMID:16756958","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"negatively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting angiogenesis","synonyms":[{"name":"down regulation of sprouting angiogenesis","type":"exact"},{"name":"down-regulation of sprouting angiogenesis","type":"exact"},{"name":"downregulation of sprouting angiogenesis","type":"exact"},{"name":"inhibition of sprouting angiogenesis","type":"narrow"}],"termid":"GO:1903671"}


id: FYECO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dimethyl sulfoxide (DMSO) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ DMSO","synonyms":[{"name":"+ dimethyl sulfoxide","type":"exact"}],"termid":"FYECO:0000371"}


id: PBO:0054955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2369","termid":"PBO:0054955"}


id: PBO:0055684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member N","termid":"PBO:0055684"}


id: GO:1904376
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[96307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[97767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["PMID:18216290","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localization to cell periphery","type":"exact"},{"name":"down-regulation of protein localization to cell periphery","type":"exact"},{"name":"downregulation of protein localization to cell periphery","type":"exact"},{"name":"inhibition of protein localization to cell periphery","type":"narrow"}],"termid":"GO:1904376","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:TermGenie","PMID:20179351","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of serine-type peptidase activity (obsolete GO:1902573)","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: PBO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arv1-like family protein Arv1 (predicted)","termid":"PBO:0001226"}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0008150","GO:0051328"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: GO:0036054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-malonyllysine + H2O => protein-lysine + malonate. This reaction is the removal of a malonyl group (CO-CH2-CO) from a malonylated lysine residue of a protein or peptide.","definition_xrefs":["PMID:21908771","GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"protein-malonyllysine demalonylase activity","synonyms":[{"name":"peptidyl-malonyllysine demalonylase activity","type":"exact"},{"name":"protein lysine demalonylation activity","type":"exact"},{"name":"protein malonyl lysine demalonylation activity","type":"exact"}],"termid":"GO:0036054"}


id: MONDO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy, absence (obsolete MONDO:0000027)","termid":"MONDO:0000027","xrefs":{"Monarch":{"xref_id":"0000027"}}}


id: MONDO:0011161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-specific antigen 1","secondary_identifiers":["MEDGEN:244171","OMIM:601876","UMLS:C1420425"],"synonyms":[{"name":"SSFA1","type":"related"},{"name":"fertilisation antigen 1","type":"related"},{"name":"fertilization antigen 1","type":"related"},{"name":"sperm-specific antigen 1","type":"exact"},{"name":"sperm-specific antigen type 1","type":"exact"}],"termid":"MONDO:0011161","xrefs":{"Monarch":{"xref_id":"0011161"}}}


id: MONDO:0013316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Occult macular dystrophy is a rare, genetic retinal dystrophy disease characterized by bilateral progressive decline of visual acuity, due to retinal dysfunction confined only to the macula, associated with normal fundus and fluorescein angiograms and severely attenuated focal macular and multifocal electroretinograms.","definition_xrefs":["Orphanet:247834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occult macular dystrophy","secondary_identifiers":["NANDO:1200934","DOID:0050578","GARD:17200","icd11.foundation:863463706","MEDGEN:462183","UMLS:C3150833","ICD10CM:H35.5","OMIM:613587"],"synonyms":[{"name":"OCMD","type":"exact"},{"name":"OMD","type":"exact"},{"name":"Omd","type":"related"},{"name":"occult macular dystrophy","type":"exact"}],"termid":"MONDO:0013316","xrefs":{"Monarch":{"xref_id":"0013316"}}}


id: GO:0046820
data:
  {"annotated_genes":["SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74768],"is_not":false,"summary":null,"term":"GO:0046820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + chorismate = 4-amino-4-deoxychorismate + L-glutamate. It is composed of two enzymatic activities (which may be present on one or two polypeptides); the first is a glutaminase which yields ammonia from glutamine, releasing glutamate. The ammonia is used by the second activity which catalyzes the amination of chorismate to form 4-amino-4-deoxychorismate.","definition_xrefs":["RHEA:11672","EC:2.6.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"4-amino-4-deoxychorismate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01716","MetaCyc:PABASYN-RXN"],"synonyms":[{"name":"ADC synthase activity","type":"related"},{"name":"PabB activity","type":"related"},{"name":"aminodeoxychorismate synthase activity","type":"related"},{"name":"chorismate:L-glutamine amido-ligase activity","type":"related"},{"name":"p-aminobenzoate synthetase","type":"related"},{"name":"para-aminobenzoic acid (PABA) synthase","type":"related"},{"name":"para-aminobenzoic acid synthase activity","type":"related"}],"termid":"GO:0046820","terms_by_termid":{"GO:0046820":null}}


id: PBO:0062241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BE member 1 pseudogene","termid":"PBO:0062241"}


id: PBO:0057242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 433","termid":"PBO:0057242"}


id: PBO:0066304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 7","termid":"PBO:0066304"}


id: PBO:0053445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 392","termid":"PBO:0053445"}


id: MONDO:0043735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrosis of bone following radiation injury.","definition_xrefs":["MESH:D010025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoradionecrosis","secondary_identifiers":["SCTID:109333005","MEDGEN:10500","NCIT:C63707","UMLS:C0029461"],"synonyms":[{"name":"Osteoradionecroses","type":"related"},{"name":"osteoradionecrosis","type":"exact"},{"name":"radiation necrosis of bone","type":"related"}],"termid":"MONDO:0043735","xrefs":{"Monarch":{"xref_id":"0043735"}}}


id: MONDO:0007510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clouston syndrome (or hidrotic ectodermal dysplasia) is characterized by the clinical triad of nail dystrophy, alopecia, and palmoplantar hyperkeratosis.","definition_xrefs":["Orphanet:189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Clouston syndrome","secondary_identifiers":["SCTID:54209007","OMIM:129500","UMLS:C0162361","DOID:14693","GARD:2056","MEDGEN:56416"],"synonyms":[{"name":"Clouston hidrotic ectodermal dysplasia","type":"related"},{"name":"Clouston syndrome","type":"exact"},{"name":"Clouston's hidrotic ectodermal dysplasia","type":"exact"},{"name":"Clouston's syndrome","type":"exact"},{"name":"ED2","type":"related"},{"name":"Patel Bixler syndrome","type":"related"},{"name":"alopecia, dysplastic nails, palmar and plantar hyperkeratosis","type":"related"},{"name":"autosomal dominant hidrotic ectodermal dysplasia","type":"related"},{"name":"ectodermal dysplasia 2, Clouston type","type":"related"},{"name":"ectodermal dysplasia, hidrotic","type":"related"},{"name":"ectodermal dysplasia, hidrotic, 2","type":"related"},{"name":"ectodermal dysplasia, hidrotic, 2, formerly","type":"related"},{"name":"ectodermal dysplasia, hidrotic, autosomal dominant","type":"related"},{"name":"hidrotic ectodermal dysplasia","type":"exact"},{"name":"hidrotic ectodermal dysplasia syndrome","type":"exact"},{"name":"hidrotic ectodermal dysplasia, autosomal dominant","type":"related"},{"name":"palmoplantar hyperkeratosis and alopecia","type":"related"}],"termid":"MONDO:0007510","xrefs":{"Monarch":{"xref_id":"0007510"}}}


id: PBO:0079709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 3","termid":"PBO:0079709"}


id: PBO:0091424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II alpha-mannosidase, subtype C, Ams1","termid":"PBO:0091424"}


id: PBO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035997"}


id: MONDO:0044746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A bacterial infection that is transmitted from animals to people.","definition_xrefs":["NCIT:C35373"],"gene_count":0,"genotype_count":0,"name":"obsolete zoonotic bacterial infection (obsolete MONDO:0044746)","secondary_identifiers":["ICD10CM:A20-A28"],"synonyms":[{"name":"Bacteria caused zoonoses","type":"exact"},{"name":"Bacteria zoonoses","type":"exact"},{"name":"zoonotic bacterial disease","type":"exact"},{"name":"zoonotic bacterial infection","type":"exact"}],"termid":"MONDO:0044746","xrefs":{"Monarch":{"xref_id":"0044746"}}}


id: MOD:01309
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - ","definition_xrefs":["Unimod:332#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphate labeled with biotin-HPDP","termid":"MOD:00639"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP - site Y","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:01309"}


id: FYPO:0006425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) in centromeric regions during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion at centromere","termid":"FYPO:0004667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"normal meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"normal meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0006425"}


id: MONDO:0018542
data:
  {"annotated_genes":["SJAG_02208","SJAG_02330","SJAG_03684","SJAG_01759","SJAG_03889","SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[88075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[87934,87935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[88535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[88471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"severe congenital neutropenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050590","GARD:13592","NCIT:C166152","NANDO:2200745","MEDGEN:343974","MedDRA:10052210","ICD9:288.01","NANDO:1200353","SCTID:89655007","OMIMPS:202700","UMLS:C1853118","Orphanet:42738","NORD:1705"],"synonyms":[{"name":"SCN","type":"exact"},{"name":"Severe Chronic Neutropenia","type":"exact"},{"name":"neutropenia, severe congenital","type":"exact"}],"termid":"MONDO:0018542","terms_by_termid":{"MONDO:0010294":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0018542"}}}


id: MONDO:0024193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portal hypertension, noncirrhotic","secondary_identifiers":["OMIMPS:617068","MEDGEN:934702","UMLS:C4310735"],"termid":"MONDO:0024193","xrefs":{"Monarch":{"xref_id":"0024193"}}}


id: GO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a collectin, a member of a group of structurally related pattern recognition molecules characterized by having a carbohydrate recognition domain of the C-type lectin family at the C-terminus and a collagenous domain at the N-terminus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"collectin binding","termid":"GO:0001862"}


id: MONDO:0016398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal disease with epilepsy (obsolete MONDO:0016398)","secondary_identifiers":["Orphanet:225686"],"termid":"MONDO:0016398","xrefs":{"Monarch":{"xref_id":"0016398"}}}


id: PBO:0065419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 6","termid":"PBO:0065419"}


id: PBO:0084032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein with similarity to mammalian CASP; packaged into COPII vesicles for trafficking between ER and Golgi; genetic interactions with GOS1 (encoding a Golgi snare protein) suggest a role in Golgi function","termid":"PBO:0084032"}


id: PBO:0044024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 3","termid":"PBO:0044024"}


id: PBO:0041367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 45","termid":"PBO:0041367"}


id: GO:0102262
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111624],"is_not":false,"summary":null,"term":"GO:0102262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil16 in tRNA + NAD(P) = H+ + a uracil16 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA-dihydrouridine16 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12454"],"termid":"GO:0102262","terms_by_termid":{"GO:0102262":null}}


id: PR:O42870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phenylalanine--tRNA ligase alpha subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01327","PRO:DNx","PANTHER:PTHR11538:SF15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine--tRNA ligase alpha subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.06","secondary_identifiers":["UniProtKB:O42870"],"synonyms":[{"name":"PheRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FARSA","type":"exact"},{"name":"phenylalanyl-tRNA synthetase alpha subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42870"}


id: PBO:0053700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 901","termid":"PBO:0053700"}


id: GO:0051030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA, small nuclear ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"snRNA transport","termid":"GO:0051030"}


id: GO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by hydrogen peroxide. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:mtg_apoptosis","PMID:16036580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"programmed cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:0010421"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: GO:0098810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter molecules from the extrasynaptic space into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter uptake","termid":"GO:0001504"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter reuptake","termid":"GO:0098810"}


id: GO:0140983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ca2+(in) + Mn2+(out) = Ca2+(out) + Mn2+(in).","definition_xrefs":["PMID:30755481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"calcium:manganese antiporter activity","secondary_identifiers":["RHEA:73059"],"synonyms":[{"name":"manganese:calcium antiporter activity","type":"exact"}],"termid":"GO:0140983"}


id: PBO:0041460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf88B (pseudogene)","termid":"PBO:0041460"}


id: PBO:0055596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3032","termid":"PBO:0055596"}


id: GO:0048788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized cytoskeletal matrix of the presynaptic active zone. It has specialized functions in organizing synaptic events such as immobilisation or translocation of synaptic vesicles, and assembling active zone components. It is believed to form a molecular scaffold that organizes neurotransmitter release sites.","definition_xrefs":["PMID:10944438","GOC:dh","GOC:dl","GOC:ef","NIF_Subcellular:sao1470121605","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"},{"relation_name":"part_of","term_name":"presynaptic active zone cytoplasmic component","termid":"GO:0098831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"cytoskeleton of presynaptic active zone","synonyms":[{"name":"CAZ","type":"narrow"},{"name":"T-bar","type":"narrow"},{"name":"T-bar ribbon","type":"narrow"},{"name":"active zone cytomatrix","type":"exact"},{"name":"pre-synaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"pre-synaptic dense body","type":"narrow"},{"name":"pre-synaptic ribbon","type":"related"},{"name":"presynaptic cytomatrix assembled at active zones","type":"exact"},{"name":"presynaptic cytoskeletal matrix","type":"exact"},{"name":"presynaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"presynaptic dense body","type":"narrow"},{"name":"presynaptic ribbon","type":"related"},{"name":"ribbon","type":"related"},{"name":"synaptic ribbon","type":"narrow"}],"termid":"GO:0048788"}


id: GO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9758920"],"synonyms":[{"name":"lateral plate mesoderm biosynthesis","type":"exact"},{"name":"lateral plate mesoderm formation","type":"exact"}],"termid":"GO:0048370"}


id: PBO:0042406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 20","termid":"PBO:0042406"}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: GO:1903208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced neuron death.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058","PMID:24252804"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced neuron death (obsolete GO:1903208)","synonyms":[{"name":"down regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down regulation of neuron death in response to H2O2","type":"exact"},{"name":"down regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"down-regulation of neuron death in response to H2O2","type":"exact"},{"name":"down-regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-induced neuron death","type":"exact"},{"name":"downregulation of neuron death in response to H2O2","type":"exact"},{"name":"downregulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of hydrogen peroxide-induced neuron death","type":"narrow"},{"name":"inhibition of neuron death in response to H2O2","type":"narrow"},{"name":"inhibition of neuron death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of neuronal cell death in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of neuron death in response to H2O2","type":"exact"},{"name":"negative regulation of neuron death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of neuronal cell death in response to hydrogen peroxide","type":"exact"},{"name":"neuroprotection against H2O2-induced cell death","type":"related"},{"name":"neuroprotection against hydrogen peroxide","type":"related"},{"name":"protection against H2O2-induced neuron death","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron death","type":"related"}],"termid":"GO:1903208"}


id: GO:0031074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any complex that acts to move proteins or RNAs into or out of the nucleus through nuclear pores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleocytoplasmic transport complex","synonyms":[{"name":"nucleocytoplasmic shuttling complex","type":"narrow"}],"termid":"GO:0031074"}


id: PBO:0029859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell_population_(obsolete_FYPO:0002378)","termid":"PBO:0029859"}


id: PBO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 1","termid":"PBO:0061518"}


id: GO:1900497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"regulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900497"}


id: PBO:0088995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear import protein Rtp1","termid":"PBO:0088995"}


id: GO:1905672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysosome organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25561470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of lysosome organization","termid":"GO:1905671"},{"relation_name":"negatively_regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysosome organization","synonyms":[{"name":"down regulation of lysosome organisation","type":"exact"},{"name":"down regulation of lysosome organization","type":"exact"},{"name":"down regulation of lysosome organization and biogenesis","type":"related"},{"name":"down-regulation of lysosome organisation","type":"exact"},{"name":"down-regulation of lysosome organization","type":"exact"},{"name":"down-regulation of lysosome organization and biogenesis","type":"related"},{"name":"downregulation of lysosome organisation","type":"exact"},{"name":"downregulation of lysosome organization","type":"exact"},{"name":"downregulation of lysosome organization and biogenesis","type":"related"},{"name":"inhibition of lysosome organisation","type":"narrow"},{"name":"inhibition of lysosome organization","type":"narrow"},{"name":"inhibition of lysosome organization and biogenesis","type":"related"},{"name":"negative regulation of lysosome organisation","type":"exact"},{"name":"negative regulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905672"}


id: SO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where a gene is rearranged due to recombination during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature_of_rearranged_gene","synonyms":[{"name":"recombination feature of rearranged gene","type":"exact"}],"termid":"SO:0000300"}


id: RO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connected_to","termid":"RO:0002170"}


id: GO:0047415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-benzoyl-D-arginine-4-nitroanilide + H2O = 4-nitroaniline + N(2)-benzoyl-D-arginine + H+.","definition_xrefs":["RHEA:14421","EC:3.5.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"D-benzoylarginine-4-nitroanilide amidase activity","secondary_identifiers":["KEGG_REACTION:R04113","MetaCyc:3.5.1.72-RXN"],"synonyms":[{"name":"D-BAPA-ase activity","type":"related"},{"name":"N-benzoyl-D-arginine-4-nitroanilide amidohydrolase activity","type":"related"},{"name":"benzoyl-D-arginine arylamidase activity","type":"related"}],"termid":"GO:0047415"}


id: PBO:0085958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; originally considered essential but deletion overlapped the TATA box of neighboring essential gene HYP2, while deletion that avoids the HYP2 TATA box is viable; transcription may be regulated by Gcr1p","termid":"PBO:0085958"}


id: GO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transport vesicle that mediates transport from the endosome to the plasma membrane, and fuses with the plasma membrane to deliver lipids and membrane proteins to the plasma membrane and to release various cargo molecules, such as proteins or hormones, by exocytosis.","definition_xrefs":["GOC:mah","GOC:kad","PMID:10679016","PMID:12110576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endosome to plasma membrane transport vesicle","synonyms":[{"name":"endosome to plasma membrane constitutive secretory pathway transport vesicle","type":"exact"},{"name":"endosome-plasma membrane transport vesicle","type":"exact"}],"termid":"GO:0070381"}


id: SO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant that is located within the UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_variant","synonyms":[{"name":"UTR variant","type":"exact"},{"name":"UTR_","type":"exact"}],"termid":"SO:0001622"}


id: PBO:0057286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 506","termid":"PBO:0057286"}


id: PBO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 24","termid":"PBO:0072147"}


id: PBO:0073502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 1","termid":"PBO:0073502"}


id: GO:0042720
data:
  {"annotated_genes":["SJAG_03648","SJAG_02809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78610,81760],"is_not":false,"summary":null,"term":"GO:0042720"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane, consisting of at least two subunits, involved in processing of both nuclear- and mitochondrially-encoded proteins targeted to the intermembrane space.","definition_xrefs":["PMID:10821182","PMID:12191769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02809":null,"SJAG_03648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IMP","type":"narrow"},{"name":"mitochondrion inner membrane peptidase complex","type":"exact"}],"termid":"GO:0042720","terms_by_termid":{"GO:0042720":null}}


id: PBO:0057514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 632","termid":"PBO:0057514"}


id: PBO:0044594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4","termid":"PBO:0044594"}


id: PBO:0042235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 7 (pseudogene)","termid":"PBO:0042235"}


id: GO:0010143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cutin, a waxy substance, which combined with cellulose forms a substance nearly impervious to water and constituting the cuticle in plants.","definition_xrefs":["ISBN:0028623819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"cutin-based cuticle development","termid":"GO:0160062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cutin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-321"],"synonyms":[{"name":"cutin anabolism","type":"exact"},{"name":"cutin biosynthesis","type":"exact"},{"name":"cutin formation","type":"exact"},{"name":"cutin synthesis","type":"exact"}],"termid":"GO:0010143"}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: GO:0050187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-phosphocreatine + H2O = creatine + phosphate.","definition_xrefs":["RHEA:12977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","termid":"GO:0016825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphoamidase activity","secondary_identifiers":["KEGG_REACTION:R01882","MetaCyc:PHOSPHOAMIDASE-RXN","EC:3.9.1.1"],"synonyms":[{"name":"creatine phosphatase activity","type":"related"},{"name":"phosphamide hydrolase activity","type":"related"}],"termid":"GO:0050187"}


id: PBO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 6","termid":"PBO:0072223"}


id: GO:0003052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}


id: MONDO:0007191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, relapsing, multisystemic vasculitis characterized by mucocutaneous lesions, as well as articular, vascular, ocular and central nervous system manifestations.","definition_xrefs":["Orphanet:117"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete predominantly large-vessel vasculitis (obsolete MONDO:0015488)","termid":"MONDO:0015488"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","termid":"MONDO:0015657"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","termid":"MONDO:0017259"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with posterior uveitis (obsolete MONDO:0017260)","termid":"MONDO:0017260"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with panuveitis (obsolete MONDO:0017261)","termid":"MONDO:0017261"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autoinflammatory syndrome with skin involvement (obsolete MONDO:0017370)","termid":"MONDO:0017370"},{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified autoinflammatory syndrome (obsolete MONDO:0017957)","termid":"MONDO:0017957"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Behcet disease","secondary_identifiers":["icd11.foundation:1668927157","NANDO:1200284","MEDGEN:2568","UMLS:C0004943","ICD9:136.1","GARD:848","DOID:13241","MedDRA:10004213","NCIT:C34416","OMIM:109650","NANDO:2200422","SCTID:310701003","MESH:D001528","EFO:0003780"],"synonyms":[{"name":"Adamantiades-Behcet disease","type":"exact"},{"name":"BD","type":"related"},{"name":"Bechet syndrome","type":"exact"},{"name":"Behcet disease","type":"exact"},{"name":"Behcet syndrome","type":"exact"},{"name":"Behcet's disease","type":"related"},{"name":"Behcet's syndrome","type":"exact"},{"name":"Behet's syndrome","type":"exact"},{"name":"Behçet disease","type":"exact"},{"name":"Behçet syndrome","type":"exact"},{"name":"Behçet's disease","type":"related"},{"name":"Behçet's syndrome","type":"exact"},{"name":"Behçet-Adamantiades syndrome","type":"exact"},{"name":"Behçet’s disease","type":"related"},{"name":"Morbus Behçet's syndrome","type":"exact"},{"name":"silk road disease","type":"exact"},{"name":"triple symptom complex","type":"exact"}],"termid":"MONDO:0007191","xrefs":{"Monarch":{"xref_id":"0007191"}}}


id: SO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the nuclear genome of cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_sequence","synonyms":[{"name":"nuclear sequence","type":"exact"}],"termid":"SO:0000738"}


id: GO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of TLR signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034122"}


id: MONDO:1010932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early onset syndrome of impaired neuromuscular transmission associated with an acetylcholinesterase deficiency in dogs due to a variation in the COLQ gene.","definition_xrefs":["PMID:32668077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital neuromuscular disease, non-human animal","termid":"MONDO:1011851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome, COLQ-related, dog","secondary_identifiers":["OMIA:001928-9615"],"termid":"MONDO:1010932","xrefs":{"Monarch":{"xref_id":"1010932"}}}


id: PBO:0065067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein HaeIII subfamily 1","termid":"PBO:0065067"}


id: GO:0046458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexadecanal, the C16 straight chain aldehyde.","definition_xrefs":["PMID:25047030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexadecanal metabolic process","synonyms":[{"name":"hexadecanal metabolism","type":"exact"}],"termid":"GO:0046458"}


id: PBO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-related transcription factor","termid":"PBO:0012271"}


id: PBO:0004668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Sap62","termid":"PBO:0004668"}


id: PBO:0045536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA2 upstream binding RNA","termid":"PBO:0045536"}


id: GO:0071106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106"}


id: GO:1902007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of toxin transport.","definition_xrefs":["GOC:dph","PMID:22792315","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of toxin transport (obsolete GO:1902007)","termid":"GO:1902007"}


id: PBO:0041046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 3","termid":"PBO:0041046"}


id: GO:0090303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"positive regulation of response to wounding","termid":"GO:1903036"},{"relation_name":"positively_regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing","termid":"GO:0090303"}


id: GO:0009455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to redox potential.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"},{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"redox taxis","synonyms":[{"name":"redoxtaxis","type":"exact"},{"name":"taxis in response to redox potential","type":"exact"},{"name":"taxis in response to redox stimulus","type":"exact"}],"termid":"GO:0009455"}


id: GO:1902314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroquinone.","definition_xrefs":["PMID:15667223","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroquinone binding","synonyms":[{"name":"quinol binding","type":"exact"}],"termid":"GO:1902314"}


id: GO:0015806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of S-methylmethionine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"S-methylmethionine transport","termid":"GO:0015806"}


id: PBO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat protein","termid":"PBO:0001938"}


id: PBO:0045097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 2","termid":"PBO:0045097"}


id: GO:0120143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["GOC:ha","PMID:23072462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to alcohol","termid":"GO:1905958"},{"relation_name":"negatively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"negative regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120143"}


id: PR:C6Y4B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC20G4.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.09","synonyms":[{"name":"Spom972h-SPAC20G4.09","type":"exact"}],"termid":"PR:C6Y4B1"}


id: PBO:0055220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2646","termid":"PBO:0055220"}


id: PBO:0027087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-arrested_mitotic_spindle_elongation_during_anaphase","termid":"PBO:0027087"}


id: PR:O13982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An angio-associated migratory cell protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C25H1.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.08c","secondary_identifiers":["UniProtKB:O13982"],"synonyms":[{"name":"Spom972h-AAMP","type":"exact"}],"termid":"PR:O13982"}


id: PBO:0076917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 epsilon","termid":"PBO:0076917"}


id: FYPO:0006919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitotic interphase","synonyms":[{"name":"normal protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"normal protein localization to nucleus during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006919"}


id: PBO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 2","termid":"PBO:0043972"}


id: GO:0010422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"}


id: PBO:0086413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored protein; transcription is induced under low-zinc conditions, as mediated by the Zap1p transcription factor, and at alkaline pH","termid":"PBO:0086413"}


id: PBO:0055637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3076","termid":"PBO:0055637"}


id: PBO:0081617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 546","termid":"PBO:0081617"}


id: GO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a vestibular receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell fate commitment","termid":"GO:0060120"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell fate commitment","synonyms":[{"name":"vestibular hair cell fate commitment","type":"exact"}],"termid":"GO:0060115"}


id: PBO:0108561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 and Mei2-associated RNA","termid":"PBO:0108561"}


id: PBO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_alpha-glucosidase_activity","termid":"PBO:0030602"}


id: PATO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsolateral orientation","synonyms":[{"name":"dorsolaterally directed","type":"exact"}],"termid":"PATO:0002496"}


id: PR:O59667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his7 gene.","definition_xrefs":["UniProtKB:O59667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine biosynthesis bifunctional protein his7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.02c","synonyms":[{"name":"Spom972h-his7","type":"exact"}],"termid":"PR:O59667"}


id: GO:2001095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mannotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mannotriose transport","termid":"GO:2001095"}


id: MONDO:0005949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with roseolovirus, the most common in humans being exanthema subitum, a benign disease of infants and young children.","definition_xrefs":["MESH:D019349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roseolovirus infectious disease","secondary_identifiers":["EFO:0007474","MEDGEN:83999","UMLS:C0376549"],"synonyms":[{"name":"Roseolovirus caused disease or disorder","type":"exact"},{"name":"Roseolovirus disease or disorder","type":"exact"},{"name":"Roseolovirus infectious disease","type":"exact"}],"termid":"MONDO:0005949","xrefs":{"Monarch":{"xref_id":"0005949"}}}


id: PR:P87126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf2 gene.","definition_xrefs":["UniProtKB:P87126","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.11c","synonyms":[{"name":"Spom972h-cwf2","type":"exact"},{"name":"complexed with cdc5 protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87126"}


id: PBO:0088048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin C-terminal hydrolase; cleaves ubiquitin-protein fusions to generate monomeric ubiquitin; hydrolyzes the peptide bond at the C-terminus of ubiquitin; also the major processing enzyme for the ubiquitin-like protein Rub1p","termid":"PBO:0088048"}


id: PBO:0028492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_post-anaphase_array","termid":"PBO:0028492"}


id: MONDO:0019906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 11 syndrome is an autosomal anomaly characterized by variable clinical features, including early growth retardation and short stature, microcephaly, developmental delay, some degree of intellectual disability, facial dysmorphism and café-au-lait spots. In some cases, congenital heart disease and endocrine abnormalities have been reported.","definition_xrefs":["Orphanet:96175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 11","secondary_identifiers":["ICD9:758.89","MEDGEN:539256","GARD:10846","UMLS:C0265444","SCTID:111310003"],"synonyms":[{"name":"RC11","type":"exact"},{"name":"Ring 11","type":"related"},{"name":"Ring chromosome 11 syndrome","type":"related"},{"name":"Ring chromosome type 11","type":"exact"},{"name":"chromosome 11 ring","type":"related"},{"name":"r(11) syndrome","type":"exact"},{"name":"r11","type":"related"}],"termid":"MONDO:0019906","xrefs":{"Monarch":{"xref_id":"0019906"}}}


id: MONDO:1011011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horner syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Horner syndrome, non-human animal","termid":"MONDO:1010240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Horner syndrome, horse","secondary_identifiers":["OMIA:001197-9796"],"termid":"MONDO:1011011","xrefs":{"Monarch":{"xref_id":"1011011"}}}


id: FYPO:0006749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell is higher than normal. Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased pre-tRNA level during vegetative growth","synonyms":[{"name":"increased pre-tRNA accumulation during vegetative growth","type":"related"},{"name":"increased pre-tRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-tRNA transcript level during vegetative growth","type":"exact"},{"name":"increased tRNA level during vegetative growth","type":"broad"},{"name":"increased tRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased transfer RNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0006749"}


id: PBO:0113211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; localizes to mitochondria–ER contact sites; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0113211"}


id: MONDO:0006960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease or damage involving the SCIATIC NERVE, which divides into the PERONEAL NERVE and TIBIAL NERVE (see also PERONEAL NEUROPATHIES and TIBIAL NEUROPATHY). Clinical manifestations may include SCIATICA or pain localized to the hip, PARESIS or PARALYSIS of posterior thigh muscles and muscles innervated by the peroneal and tibial nerves, and sensory loss involving the lateral and posterior thigh, posterior and lateral leg, and sole of the foot. The sciatic nerve may be affected by trauma; ISCHEMIA; COLLAGEN DISEASES; and other conditions. (From Adams et al., Principles of Neurology, 6th ed, p1363)","definition_xrefs":["MESH:D020426"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lesion of sciatic nerve","termid":"MONDO:0001543"},{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sciatic neuropathy","secondary_identifiers":["MedDRA:10048950","EFO:1001166","UMLS:C0149940","MEDGEN:57705","SCTID:52585001","DOID:11446"],"termid":"MONDO:0006960","xrefs":{"Monarch":{"xref_id":"0006960"}}}


id: FYPO:0006875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is abnormal.","definition_xrefs":["PMID:17895368","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","synonyms":[{"name":"abnormal protein localisation to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex of cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell tip cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006875"}


id: GO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within the mucosal tissue of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:15609020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosal lymphocyte homeostasis","termid":"GO:0002261"}


id: GO:0019909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and modulates of the activity of [pyruvate dehydrogenase (lipoamide)] phosphatase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete [pyruvate dehydrogenase (lipoamide)] phosphatase regulator activity (obsolete GO:0019909)","synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019909"}


id: RO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c acts upstream of or within p if c is enables 'p' and p' causally upstream of or within p","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002264"}


id: PBO:0062668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily J member 1","termid":"PBO:0062668"}


id: PBO:0119274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YOR152C","termid":"PBO:0119274"}


id: FYPO:0006148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"},{"relation_name":"is_a","term_name":"decreased transcription during nitrogen starvation","termid":"FYPO:0005118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished transcription during nitrogen starvation","synonyms":[{"name":"abolished nitrogen deprivation induced gene expression","type":"related"},{"name":"abolished transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished transcription during nitrogen depletion","type":"exact"},{"name":"abolished transcription during nitrogen deprivation","type":"exact"},{"name":"abolished transcription during nitrogen limitation","type":"exact"},{"name":"abolished transcription during nitrogen starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during nitrogen starvation during vegetative growth","type":"exact"},{"name":"abolished transcription in response to nitrogen starvation","type":"exact"},{"name":"transcription abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006148"}


id: MONDO:0002406
data:
  {"annotated_genes":["SJAG_04109","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[88373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An inflammatory process affecting the skin. Signs include red rash, itching, and blister formation. Representative examples are contact dermatitis, atopic dermatitis, and seborrheic dermatitis.","definition_xrefs":["NCIT:C2983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2723","UMLS:C3875321","ICD9:692.9","MEDGEN:849741","MESH:D003872","SCTID:43116000"],"synonyms":[{"name":"inflammation of skin","type":"exact"},{"name":"inflammation of the skin","type":"exact"},{"name":"inflammation of zone of skin","type":"exact"},{"name":"inflammatory skin disease","type":"exact"},{"name":"skin inflammation","type":"exact"},{"name":"zone of skin inflammation","type":"exact"}],"termid":"MONDO:0002406","terms_by_termid":{"MONDO:0008218":null,"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0002406"}}}


id: MONDO:0010868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited rippling muscle disease","termid":"MONDO:0020704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"rippling muscle disease 1","secondary_identifiers":["UMLS:C1838254","OMIM:600332","DOID:0070308","MEDGEN:324987","GARD:9165"],"synonyms":[{"name":"RMD1","type":"exact"},{"name":"rippling muscle disease 1","type":"exact"},{"name":"rippling muscle disease, 1","type":"related"},{"name":"rippling muscle disease-1","type":"exact"}],"termid":"MONDO:0010868","xrefs":{"Monarch":{"xref_id":"0010868"}}}


id: GO:0046639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of alpha-beta T cell development","type":"related"},{"name":"negative regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046639"}


id: MONDO:0020362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inverse Marcus-Gunn phenomenon is a rare congenital synkinesis where jaw opening by the pterygoid muscle (during eating or yawning) causes eyelid drooping from inhibition of the oculomotor nerve to the levator palpebrae superioris. Familial occurrence has been reported.","definition_xrefs":["Orphanet:98951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jaw-winking syndrome","termid":"MONDO:0007946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverse Marcus-Gunn phenomenon","secondary_identifiers":["MEDGEN:1784220","GARD:19608","icd11.foundation:348052110","UMLS:C5548210"],"termid":"MONDO:0020362","xrefs":{"Monarch":{"xref_id":"0020362"}}}


id: PBO:0063924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 3","termid":"PBO:0063924"}


id: PBO:0065133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2","termid":"PBO:0065133"}


id: GO:0102585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanin A3 + malonyl-CoA = anthocyanin A5 + CoA.","definition_xrefs":["RHEA:72871","PMID:17292360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15331"],"termid":"GO:0102585"}


id: PBO:0056452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 4","termid":"PBO:0056452"}


id: MONDO:0011688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy characterized by autosomal recessive inheritance of muscular dystrophy with variable penetrance of intellectual disability and structural brain abnormalities that has material basis in homozygous or compound heterozygous mutation in the FKRP gene on chromosome 19q13.3.","definition_xrefs":["PMID:14652796","PMID:11592034","DOID:0110635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0024322","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy type B5","secondary_identifiers":["MESH:C564691","MEDGEN:335764","OMIM:606612","Orphanet:52428","UMLS:C1847759"],"synonyms":[{"name":"FKRP-related congenital muscular dystrophy","type":"exact"},{"name":"MDC1C","type":"exact"},{"name":"MDDGB5","type":"exact"},{"name":"congenital muscular dystrophy 1C","type":"exact"},{"name":"congenital muscular dystrophy-FKRP related","type":"exact"},{"name":"muscular dystrophy, congenital, 1C","type":"related"},{"name":"muscular dystrophy, congenital, FKRP-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with or without intellectual disability), type B, 5","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with or without mental retardation), type B, 5","type":"exact"}],"termid":"MONDO:0011688","xrefs":{"Monarch":{"xref_id":"0011688"}}}


id: PBO:0081757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF687 antisense RNA 1","termid":"PBO:0081757"}


id: PBO:0058831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8061","termid":"PBO:0058831"}


id: PBO:0046987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member L, pseudogene","termid":"PBO:0046987"}


id: MONDO:0035220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"PLG-related hereditary angioedema with normal C1inh","secondary_identifiers":["MEDGEN:1843266","Orphanet:537072","UMLS:C5680155","ICD10CM:D84.1","GARD:22217"],"synonyms":[{"name":"PLG-related HAE with normal C1 inhibitor","type":"exact"}],"termid":"MONDO:0035220","xrefs":{"Monarch":{"xref_id":"0035220"}}}


id: GO:0097720
data:
  {"annotated_genes":["SJAG_03879","SJAG_03793","SJAG_03799","SJAG_03631","SJAG_04668","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74820,81353,94291,100030],"is_not":false,"summary":null,"term":"GO:0097720"},{"annotations":[118150,102935],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a transcription factor as a consequence of dephosphorylation by Ca(2+)-activated calcineurin. The process begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin is a calcium- and calmodulin-dependent serine/threonine protein phosphatase with a conserved function in eukaryotic species from yeast to humans. In yeast and fungi, calcineurin regulates stress signaling and cell cycle, and sporulation and virulence in pathogenic fungi. In metazoans, calcineurin is involved in cell commitment, organogenesis and organ development and immune function of T-lymphocytes. By a conserved mechanism, calcineurin phosphatase activates fungal Crz1 and mammalian NFATc by dephosphorylation and translocation of these transcription factors to the nucleus to regulate gene expression.","definition_xrefs":["PMID:25655284","PMID:26851544","GOC:di","PMID:25878052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcineurin signaling","type":"related"},{"name":"calcineurin-mediated signalling","type":"exact"}],"termid":"GO:0097720","terms_by_termid":{"GO:0097720":null,"GO:0106057":null}}


id: PBO:0109087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 1","termid":"PBO:0109087"}


id: PBO:0081024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 6","termid":"PBO:0081024"}


id: PBO:0004734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R68 (predicted)","termid":"PBO:0004734"}


id: FYPO:0004537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling does not occur. As a result, the septation initiation network (SIN) signaling pathway is activated despite activation of the mitotic spindle assembly checkpoint (SAC). Normally, under conditions that activate the SAC, SIN activation is inhibited and the cell cycle arrests in anaphase. In this phenotype, premature SIN activation leads to premature cytokinesis and the formation of cut cells.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:11952833"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"FYPO:0004536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint override","synonyms":[{"name":"SIN activation in presence of active mitotic SAC","type":"exact"},{"name":"abolished response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"mitotic SAC override","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint override","type":"exact"},{"name":"septation initiation signaling activation in presence of active mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0004537"}


id: PBO:0043122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian associated repressor of transcription","termid":"PBO:0043122"}


id: GO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}


id: PBO:0059248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L17","termid":"PBO:0059248"}


id: MONDO:0019262
data:
  {"annotated_genes":["SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"}]},"cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) typically characterized by onset at early school age with vision loss due to retinopathy, seizures and the decline of mental and motor capacities.","definition_xrefs":["Orphanet:79264"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02716":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002039","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"juvenile neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201243","GARD:4938","SCTID:61663001","icd11.foundation:1716107919","DOID:0050756","MedDRA:10052073","NANDO:1200154"],"synonyms":[{"name":"JNCL","type":"exact"},{"name":"Spielmeyer-Vogt disease","type":"exact"},{"name":"batten disease","type":"exact"},{"name":"juvenile NCL","type":"exact"},{"name":"juvenile neuronal ceroid lipofuscinosis","type":"exact"}],"termid":"MONDO:0019262","terms_by_termid":{"MONDO:0008767":null},"xrefs":{"Monarch":{"xref_id":"0019262"}}}


id: FYPO:0004836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein oxidation during mitotic cell cycle","type":"related"},{"name":"reduced protein oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004836"}


id: PBO:0055312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2740","termid":"PBO:0055312"}


id: FYPO:0002275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is abnormal. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein degradation","synonyms":[{"name":"abnormal protein breakdown","type":"exact"},{"name":"abnormal protein catabolic process","type":"exact"},{"name":"abnormal protein catabolism","type":"exact"}],"termid":"FYPO:0002275"}


id: FYPO:0000589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of ascospore formation is increased, i.e. sporulation takes place more rapidly than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of sporulation","synonyms":[{"name":"increased rate of ascospore formation","type":"exact"},{"name":"sporulation: increased rate","type":"related"}],"termid":"FYPO:0000589"}


id: GO:0046637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell differentiation","synonyms":[{"name":"regulation of alpha-beta T cell development","type":"related"},{"name":"regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046637"}


id: PBO:0056666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 4","termid":"PBO:0056666"}


id: PBO:0080446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 4","termid":"PBO:0080446"}


id: PBO:0068003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 305","termid":"PBO:0068003"}


id: FYPO:0005776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing v.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on acetaldehyde","synonyms":[{"name":"normal cell population growth in presence of acetaldehyde","type":"exact"},{"name":"normal cell population growth on acetaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on acetaldehyde","type":"exact"}],"termid":"FYPO:0005776"}


id: GO:0045450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicoid mRNA localization","synonyms":[{"name":"bicoid mRNA localisation","type":"exact"},{"name":"establishment and maintenance of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045450"}


id: PBO:0049383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 5","termid":"PBO:0049383"}


id: PBO:0064936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase domain and WD repeat containing 1","termid":"PBO:0064936"}


id: GO:0060815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation of mRNAs that contribute to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation involved in anterior/posterior axis specification","termid":"GO:0060815"}


id: PBO:0088026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; forms extensive associations with the branch site-3' splice site-3' exon region upon prespliceosome formation; similarity to the mammalian U2 snRNP-associated splicing factor SAP155","termid":"PBO:0088026"}


id: PBO:0027769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_anaphase","termid":"PBO:0027769"}


id: PR:O43014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannose-6-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10309:SF0","OMA:SCHPO03721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.16","secondary_identifiers":["UniProtKB:O43014"],"synonyms":[{"name":"PMI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphohexomutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MPI","type":"exact"},{"name":"phosphomannose isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43014"}


id: FYPO:0007688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome does not occur during metaphase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:16541024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to kinetochore during meiosis I","termid":"FYPO:0004763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during meiotic metaphase I","synonyms":[{"name":"abolished protein localisation to kinetochore during meiotic metaphase I","type":"exact"},{"name":"abolished protein localization to kinetochore during meiosis I metaphase","type":"exact"},{"name":"protein localization to kinetochore abolished during meiotic metaphase I","type":"exact"}],"termid":"FYPO:0007688"}


id: MOD:00678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an hydroxylated L-proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated proline","synonyms":[{"name":"HyPro","type":"exact"}],"termid":"MOD:00678"}


