# terms

id: GO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A preprogrammed process associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components. An example of this process is found in Arabidopsis thaliana, when older leaves or floral organs are shed.","definition_xrefs":["ISBN:0387987819","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence (obsolete GO:0010149)","secondary_identifiers":["Wikipedia:Senescence"],"synonyms":[{"name":"senescence","type":"exact"}],"termid":"GO:0010149"}


id: PBO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutamate-tRNA ligase Gus1","termid":"PBO:0090059"}


id: PBO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin Pcp1","termid":"PBO:0001968"}


id: PBO:0064284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O1","termid":"PBO:0064284"}


id: PBO:0090892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mcp3 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090892"}


id: PBO:0089036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cdc5","termid":"PBO:0089036"}


id: PBO:0075936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 1","termid":"PBO:0075936"}


id: CHEBI:338412
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisomycin","termid":"CHEBI:338412"}


id: PBO:0013772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp101","termid":"PBO:0013772"}


id: MONDO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatitis that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"granulomatous hepatitis","secondary_identifiers":["NCIT:C27015","UMLS:C0235369","MEDGEN:115987","DOID:2239","SCTID:86514004"],"termid":"MONDO:0002252","xrefs":{"Monarch":{"xref_id":"0002252"}}}


id: PBO:0017059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family, with repeat expansion","termid":"PBO:0017059"}


id: PBO:0080218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vinculin/alpha-catenin family member 1, pseudogene","termid":"PBO:0080218"}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PMID:31278118","PomBase:mah","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000002","FYPO:0000661"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: PBO:0058153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4448","termid":"PBO:0058153"}


id: PBO:0048998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 6","termid":"PBO:0048998"}


id: PBO:0029332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation","termid":"PBO:0029332"}


id: GO:0036257
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a multivesicular body. A multivesicular body is a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["PMID:11566881","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multivesicular body organization","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MVB organization","type":"exact"}],"termid":"GO:0036257","terms_by_termid":{"GO:0034496":null}}


id: FYPO:0006188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is decreased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:20110347","PomBase:mah","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"reduced rate of protein exchange in actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0006188"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: PBO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 1","termid":"PBO:0048682"}


id: GO:0033965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the amide bond in aculeacin A and related neutral lipopeptide antibiotics, releasing the long-chain fatty acid side-chain.","definition_xrefs":["EC:3.5.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"aculeacin-A deacylase activity","secondary_identifiers":["MetaCyc:3.5.1.70-RXN"],"synonyms":[{"name":"aculeacin A acylase activity","type":"related"},{"name":"aculeacin-A amidohydrolase activity","type":"related"}],"termid":"GO:0033965"}


id: GO:2001147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to camalexin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"camalexin binding","synonyms":[{"name":"3-(1,3-thiazol-2-yl)-1H-indole binding","type":"exact"}],"termid":"GO:2001147"}


id: PBO:0036291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mba1 (predicted)","termid":"PBO:0036291"}


id: MONDO:0016439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Elastoderma is a rare condition that affects the skin. People affected by elastoderma generally have increased laxity of skin covering a specific area of the body. Decreased recoil of the skin has also been reported. Although any part of the body can be affected, the skin of the neck and extremities (arms and legs, especially at the elbows and/or knees) are most commonly involved. The exact underlying cause is currently unknown; however, it generally occurs sporadically in people with no family history of the condition. There is no standard therapy available for elastoderma. Some cases have been treated with surgical excision (removal of affected skin), but hyperlaxity of skin often returns following the surgery.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"elastoderma","secondary_identifiers":["icd11.foundation:1880397739","SCTID:238832003","GARD:12716","MEDGEN:590504","Orphanet:228240","UMLS:C0406555","ICD9:701.8"],"termid":"MONDO:0016439","xrefs":{"Monarch":{"xref_id":"0016439"}}}


id: MONDO:1011497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, sheep","secondary_identifiers":["OMIA:000327-9940"],"termid":"MONDO:1011497","xrefs":{"Monarch":{"xref_id":"1011497"}}}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: MONDO:0012403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 7","secondary_identifiers":["OMIM:610065","UMLS:C1864732","MEDGEN:355279"],"synonyms":[{"name":"SLEB7","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0012403","xrefs":{"Monarch":{"xref_id":"0012403"}}}


id: PBO:0083334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the characterized ORF BDF1/YLR399C","termid":"PBO:0083334"}


id: MONDO:0014555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peeling skin syndrome (PSS) type A is a non inflammatory form of generalized PSS, a type of ichthyosis, characterized by generalized white scaling and superficial painless peeling of the skin.","definition_xrefs":["Orphanet:263548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized peeling skin syndrome","termid":"MONDO:0010033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome type A","secondary_identifiers":["GARD:17258","MEDGEN:864166","UMLS:C4015729","DOID:0070522","OMIM:616265"],"synonyms":[{"name":"PSS type A","type":"exact"},{"name":"PSS3","type":"related"},{"name":"generalised deciduous skin type A","type":"exact"},{"name":"generalised peeling skin syndrome type A","type":"exact"},{"name":"generalized deciduous skin type A","type":"exact"},{"name":"generalized peeling skin syndrome type A","type":"exact"},{"name":"non-inflammatory generalised peeling skin syndrome type A.","type":"exact"},{"name":"non-inflammatory generalized peeling skin syndrome type A.","type":"exact"},{"name":"non-inflammatory peeling skin syndrome type A","type":"exact"},{"name":"peeling skin syndrome 3","type":"related"},{"name":"peeling skin syndrome type 3","type":"exact"}],"termid":"MONDO:0014555","xrefs":{"Monarch":{"xref_id":"0014555"}}}


id: PBO:0029427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029427"}


id: MONDO:0023079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal nevus vitamin D resistant rickets","termid":"MONDO:0023079","xrefs":{"Monarch":{"xref_id":"0023079"}}}


id: GO:0038106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choriogonadotropin hormone, a heterodimer, with an alpha subunit identical to that of luteinizing hormone (LH), follicle-stimulating hormone (FSH) and thyroid-stimulating hormone (TSH), and a unique beta subunit.","definition_xrefs":["Wikipedia:Human_chorionic_gonadotropin","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"choriogonadotropin hormone binding","synonyms":[{"name":"chorionic gonadotrophin binding","type":"exact"},{"name":"chorionic gonadotropin binding","type":"exact"}],"termid":"GO:0038106"}


id: FYPO:0004852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects an RNA transport process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"RNA localization phenotype","termid":"FYPO:0004853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"RNA transport phenotype","termid":"FYPO:0004852"}


id: PBO:0049559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 21","termid":"PBO:0049559"}


id: GO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the metanephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric smooth muscle tissue development","termid":"GO:0072208"}


id: GO:0102131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxyglutaryl-[acp] methyl ester = NADPH + H+ + a 3-oxo-glutaryl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-glutaryl-[acp] methyl ester reductase activity (obsolete GO:0102131)","termid":"GO:0102131"}


id: MONDO:1011579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nonspherocytic hemolytic anemia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonspherocytic hemolytic anemia, non-human animal","termid":"MONDO:1011407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonspherocytic hemolytic anemia, dog","secondary_identifiers":["OMIA:000433-9615"],"termid":"MONDO:1011579","xrefs":{"Monarch":{"xref_id":"1011579"}}}


id: FYPO:0001211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc3Man9GlcNAc measured in a cell is too low to detect. Glc3Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing three D-glucose residues, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PomBase:mah","PMID:9813085","CHEBI:53019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"Glc3Man9GlcNAc absent from cell","synonyms":[{"name":"G3M9 glycan absent from cell","type":"exact"},{"name":"Glc3Man9GlcNAc absent from cell during mitotic cell cycle","type":"related"},{"name":"Glc3Man9GlcNAc absent from cell during vegetative growth","type":"exact"},{"name":"Glc3Man9GlcNAc2 absent from cell","type":"exact"},{"name":"absent Glc3Man9GlcNAc","type":"exact"}],"termid":"FYPO:0001211"}


id: FYPO:0007678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal sterol distribution","termid":"FYPO:0007678"}


id: MONDO:0020268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ichthyosis associated with ocular features (obsolete MONDO:0020268)","secondary_identifiers":["Orphanet:98698"],"termid":"MONDO:0020268","xrefs":{"Monarch":{"xref_id":"0020268"}}}


id: PBO:0064276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H2","termid":"PBO:0064276"}


id: PBO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOrphology Defective","termid":"PBO:0005595"}


id: PBO:0048911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member F","termid":"PBO:0048911"}


id: MONDO:0021291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the fundus of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric fundus carcinoma","termid":"MONDO:0003970"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of fundus of stomach","secondary_identifiers":["MEDGEN:91053","NCIT:C4429","SCTID:92598002","UMLS:C0345800"],"synonyms":[{"name":"carcinoma in situ of fundus of stomach","type":"exact"},{"name":"carcinoma in situ of gastric fundus","type":"exact"},{"name":"carcinoma in situ of the fundus of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric fundus","type":"exact"},{"name":"fundus of stomach carcinoma in situ","type":"exact"},{"name":"fundus of stomach in situ carcinoma","type":"exact"},{"name":"gastric fundus carcinoma in situ","type":"exact"},{"name":"gastric fundus carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 fundus of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric fundus carcinoma","type":"exact"}],"termid":"MONDO:0021291","xrefs":{"Monarch":{"xref_id":"0021291"}}}


id: GO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein phosphorylation (obsolete GO:0039612)","termid":"GO:0039612"}


id: GO:1900296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"positively_regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of heptasaccharide transport","synonyms":[{"name":"activation of heptasaccharide transport","type":"narrow"},{"name":"up regulation of heptasaccharide transport","type":"exact"},{"name":"up-regulation of heptasaccharide transport","type":"exact"},{"name":"upregulation of heptasaccharide transport","type":"exact"}],"termid":"GO:1900296"}


id: PATO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A width which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"width","termid":"PATO:0000921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased width","synonyms":[{"name":"narrow","type":"related"}],"termid":"PATO:0000599"}


id: MONDO:0004955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic syndrome (obsolete MONDO:0004955)","secondary_identifiers":["NANDO:1100002"],"termid":"MONDO:0004955","xrefs":{"Monarch":{"xref_id":"0004955"}}}


id: SO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is incomplete.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragmentary","synonyms":[{"name":"fragment","type":"exact"}],"termid":"SO:0000731"}


id: MONDO:0013250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 17p12-q11.2.","definition_xrefs":["DOID:0110531","PMID:19888295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 85","secondary_identifiers":["MEDGEN:463629","UMLS:C3160740","GARD:22635","OMIM:613392"],"synonyms":[{"name":"DFNB85","type":"narrow"},{"name":"autosomal recessive deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 85","type":"narrow"},{"name":"deafness, autosomal recessive 85","type":"narrow"}],"termid":"MONDO:0013250","xrefs":{"Monarch":{"xref_id":"0013250"}}}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: MONDO:1012338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency, goat","secondary_identifiers":["OMIA:001235-9925"],"termid":"MONDO:1012338","xrefs":{"Monarch":{"xref_id":"1012338"}}}


id: PBO:0052444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 1","termid":"PBO:0052444"}


id: PBO:0005276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.2","termid":"PBO:0005276"}


id: GO:1990227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a paranodal junction, a highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. A paranodal junction flanks the node of Ranvier in myelinated nerve, electrically isolates the myelinated from unmyelinated nerve segments, and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["PMID:24011083","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paranodal junction maintenance","synonyms":[{"name":"axoglial septate junction maintenance","type":"exact"},{"name":"paranodal axoglial junction maintenance","type":"exact"},{"name":"paranodal septate maintenance","type":"exact"}],"termid":"GO:1990227"}


id: MONDO:0021055
data:
  {"annotated_genes":["SJAG_02261","SJAG_01419","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[88990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"Familial adenomatous polyposis (FAP) is characterized by the development of hundreds to thousands of adenomas in the rectum and colon during the second decade of life.","definition_xrefs":["Orphanet:733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic or attenuated familial adenomatous polyposis","termid":"MONDO:0021057"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:175100","MEDGEN:46010","UMLS:C0032580","ICDO:8220/0","GARD:6408","DECIPHER:49","MedDRA:10056981","NCIT:C3339","NORD:1121","SCTID:72900001","DOID:0050424","NANDO:2200915"],"synonyms":[{"name":"APC - adenomatous polyposis coli","type":"exact"},{"name":"FAP","type":"exact"},{"name":"FPC","type":"related"},{"name":"Familial Adenomatous Polyposis","type":"exact"},{"name":"adenomatous polyposis coli","type":"exact"},{"name":"adenomatous polyposis of the colon","type":"exact"},{"name":"classic FAP","type":"exact"},{"name":"classic familial adenomatous polyposis","type":"exact"},{"name":"colorectal adenomatous polyposis","type":"exact"},{"name":"familial adenomatous polyposis","type":"exact"},{"name":"familial adenomatous polyposis coli","type":"exact"},{"name":"familial adenomatous polyposis of the colon","type":"related"},{"name":"familial adenomatous polyposis syndrome","type":"exact"},{"name":"familial multiple polyposis","type":"related"},{"name":"familial polyposis","type":"exact"},{"name":"familial polyposis coli","type":"exact"},{"name":"hereditary adenomatous polyposis coli","type":"exact"},{"name":"hereditary polyposis coli","type":"related"},{"name":"polyposis coli","type":"exact"}],"termid":"MONDO:0021055","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021055"}}}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: PBO:0041268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 1","termid":"PBO:0041268"}


id: MONDO:0019951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rigid spine syndrome (RSS) is a slowly progressive childhood-onset congenital muscular dystrophy characterized by contractures of the spinal extensor muscles associated with abnormal posture (limitation of neck and trunk flexure), progressive scoliosis of the spine, early marked cervico-axial muscle weakness with relatively preserved strength and function of the extremities and progressive respiratory insufficiency.","definition_xrefs":["Orphanet:97244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"rigid spine syndrome","secondary_identifiers":["GARD:4723","icd11.foundation:801727141","MESH:C535683"],"synonyms":[{"name":"desmin-related myopathies with Mallory bodies","type":"related"},{"name":"muscular dystrophy, congenital, merosin positive with early spine rigidity","type":"related"},{"name":"rigid spine congenital muscular dystrophy","type":"exact"},{"name":"rigid spine muscular dystrophy-1","type":"related"}],"termid":"MONDO:0019951","xrefs":{"Monarch":{"xref_id":"0019951"}}}


id: PBO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144NL antisense RNA 1","termid":"PBO:0042078"}


id: MONDO:0014200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant neurodevelopmental condition related to variants in CACNA1D. Most reported variants are de novo and functional studies have indicated a gain-of-function disease mechanism. This condition is characterized by developmental delay/intellectual disability, autism spectrum disorder, hypotonia and seizures. Other reported features include endocrine abnormalities such as primary aldosteronism and congenital hyperinsulinemic hypoglycemia, self-injurious behavior, facial dysmorphisms, and heart defects.","definition_xrefs":["PMID:32583268","PMID:37122292","PMID:23913001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldosterone-producing adenoma with seizures and neurological abnormalities","secondary_identifiers":["GARD:17591","UMLS:C3809609","MEDGEN:815939","Orphanet:369929","OMIM:615474"],"synonyms":[{"name":"APA with seizures and neurological abnormalities","type":"exact"},{"name":"Conn adenoma","type":"related"},{"name":"Conn adenoma with seizures and neurological abnormalities","type":"exact"},{"name":"PASNA","type":"related"},{"name":"aldosterone-secreting adenoma","type":"related"},{"name":"aldosterone-secreting adenoma with seizures and neurological abnormalities","type":"exact"},{"name":"aldosteronoma","type":"related"},{"name":"complex neurodevelopmental disorder with or without aldosteronism","type":"exact"},{"name":"primary aldosteronism due to Conn adenoma","type":"related"},{"name":"primary aldosteronism, seizures, and neurologic abnormalities","type":"exact"}],"termid":"MONDO:0014200","xrefs":{"Monarch":{"xref_id":"0014200"}}}


id: PBO:0050516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D cluster","termid":"PBO:0050516"}


id: PBO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAN1","termid":"PBO:0011140"}


id: GO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification process","synonyms":[{"name":"activation of protein modification","type":"narrow"},{"name":"stimulation of protein modification","type":"narrow"},{"name":"up regulation of protein modification","type":"exact"},{"name":"up-regulation of protein modification","type":"exact"},{"name":"upregulation of protein modification","type":"exact"}],"termid":"GO:0031401"}


id: GO:0016632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["EC:1.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor","termid":"GO:0016632"}


id: PBO:0038473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 11, pseudogene","termid":"PBO:0038473"}


id: PBO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF18B divergent transcript","termid":"PBO:0052372"}


id: GO:0010304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.","definition_xrefs":["GOC:mah","PMID:16157880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II catabolic process","synonyms":[{"name":"LHCII catabolism","type":"related"}],"termid":"GO:0010304"}


id: GO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).","definition_xrefs":["PMID:10506196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type alkanesulfonate transporter transporter activity","synonyms":[{"name":"alkanesulfonate transmembrane transporter activity","type":"broad"},{"name":"alkanesulfonate transporter activity","type":"related"},{"name":"alkanesulphonate transporter activity","type":"exact"}],"termid":"GO:0042959"}


id: MONDO:0019298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare urticaria.","gene_count":0,"genotype_count":0,"name":"obsolete rare urticaria (obsolete MONDO:0019298)","secondary_identifiers":["Orphanet:79384"],"synonyms":[{"name":"rare hives","type":"exact"},{"name":"rare urticaria","type":"exact"},{"name":"rare urticaria (disease)","type":"exact"}],"termid":"MONDO:0019298","xrefs":{"Monarch":{"xref_id":"0019298"}}}


id: PBO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 4","termid":"PBO:0070748"}


id: SO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U5_LTR_region","termid":"SO:0000422"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_five_prime_LTR_region","synonyms":[{"name":"U5 5' long terminal repeat region","type":"exact"},{"name":"U5 five prime LTR region","type":"exact"}],"termid":"SO:0000428"}


id: MONDO:0014395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amyotrophic lateral sclerosis that has material basis in mutation in the CHCHD10 gene on chromosome 22. It is characterized by adult onset of either frontotemporal dementia and/or amyotrophic lateral sclerosis.","definition_xrefs":["DOID:0060214","OMIM:615911","PMID:24934289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"frontotemporal dementia with motor neuron disease","termid":"MONDO:0017161"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 2","secondary_identifiers":["GARD:18397","MEDGEN:863085","UMLS:C4014648"],"synonyms":[{"name":"FTDALS2","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 2","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis type 2","type":"exact"}],"termid":"MONDO:0014395","xrefs":{"Monarch":{"xref_id":"0014395"}}}


id: MONDO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the stomach. The vast majority of cases arise from the corpus-fundus region. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent. It may be associated with autoimmune chronic atrophic gastritis, multiple endocrine neoplasia type 1, or it may be sporadic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor G1","secondary_identifiers":["NCIT:C4635","MEDGEN:83885","UMLS:C0349529","EFO:1000275"],"synonyms":[{"name":"gastric ECL cell NET","type":"exact"},{"name":"gastric ECL cell NET G1","type":"exact"},{"name":"gastric ECL cell, histamine-producing NET","type":"exact"},{"name":"gastric ECL-cell carcinoid tumor","type":"exact"},{"name":"gastric ECL-cell carcinoid tumour","type":"exact"},{"name":"gastric NET G1","type":"exact"},{"name":"gastric carcinoid tumor","type":"exact"},{"name":"gastric carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumour","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of stomach","type":"exact"},{"name":"stomach NET G1","type":"exact"},{"name":"stomach carcinoid tumor","type":"exact"},{"name":"stomach carcinoid tumour","type":"exact"},{"name":"stomach neuroendocrine neoplasm G1","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006227","xrefs":{"Monarch":{"xref_id":"0006227"}}}


id: PR:O13453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase pmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.01","synonyms":[{"name":"Spom972h-pmp1","type":"exact"}],"termid":"PR:O13453"}


id: GO:0098908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal action potential","synonyms":[{"name":"generation of action potential","type":"related"}],"termid":"GO:0098908"}


id: GO:0032246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a pyrimidine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"regulates","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine nucleoside transport","termid":"GO:0032246"}


id: PBO:0082676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; implicated in osmotic stress response; other complex members are Kae1p, Cgi121p, Pcc1p, and Bud32p","termid":"PBO:0082676"}


id: MONDO:0006050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, aggressive, high grade invasive ductal carcinoma, not otherwise specified. It is characterized by the presence of pleomorphic and bizarre malignant cells that constitute more than 50 percent of the malignant cellular infiltrate.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic breast carcinoma","secondary_identifiers":["EFO:1000047","MEDGEN:307976","NCIT:C5161","UMLS:C1514169"],"synonyms":[{"name":"anaplastic breast carcinoma","type":"exact"}],"termid":"MONDO:0006050","xrefs":{"Monarch":{"xref_id":"0006050"}}}


id: FYPO:0006253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and transfer RNA (tRNA) is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-RNA interaction","termid":"FYPO:0002357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0002131"],"is_obsolete":false,"name":"normal tRNA binding","synonyms":[{"name":"normal protein-tRNA interaction","type":"exact"},{"name":"normal protein-transfer RNA interaction","type":"exact"},{"name":"normal transfer RNA binding","type":"exact"}],"termid":"FYPO:0006253"}


id: GO:1990149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of COPI proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["PMID:11970962","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete COPI vesicle coating (obsolete GO:1990149)","synonyms":[{"name":"COPI vesicle coating","type":"exact"}],"termid":"GO:1990149"}


id: GO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Immune response taking place in the gut-associated lymphoid tissue (GALT). GALT includes Peyer's patches, appendix, and solitary lymph nodules.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in gut-associated lymphoid tissue","synonyms":[{"name":"immune response in GALT","type":"exact"}],"termid":"GO:0002387"}


id: MONDO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase deficiency","secondary_identifiers":["Orphanet:2364","GARD:3159","MESH:C580233","UMLS:C5575057","icd11.foundation:1092207912","MEDGEN:1805539"],"synonyms":[{"name":"GSD due to lactate dehydrogenase deficiency","type":"exact"},{"name":"LDH deficiency","type":"exact"},{"name":"glycogenosis due to lactate dehydrogenase deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0016527","xrefs":{"Monarch":{"xref_id":"0016527"}}}


id: MONDO:0044967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the limb.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete limb disorder (obsolete MONDO:0044967)","secondary_identifiers":["ICD9:V49.1","SCTID:128605003"],"synonyms":[{"name":"disease of limb","type":"exact"},{"name":"disease or disorder of limb","type":"exact"},{"name":"disorder of extremity","type":"exact"},{"name":"disorder of limb","type":"exact"},{"name":"limb disease","type":"exact"},{"name":"limb disease or disorder","type":"exact"}],"termid":"MONDO:0044967","xrefs":{"Monarch":{"xref_id":"0044967"}}}


id: PBO:0049110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 171","termid":"PBO:0049110"}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: PBO:0076666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem C2 domains, nuclear","termid":"PBO:0076666"}


id: PBO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine hydrolase (predicted)","termid":"PBO:0005225"}


id: PBO:0027139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_Golgi_apparatus","termid":"PBO:0027139"}


id: GO:0061740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The targeting of a protein to the lysosome process in which an input protein binds to a chaperone and subsequently to a lysosomal receptor.","definition_xrefs":["GOC:dph","PMID:22748206","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to lysosome","termid":"GO:0006622"},{"relation_name":"is_a","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0006605","GO:0030163","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"protein targeting to lysosome involved in chaperone-mediated autophagy","termid":"GO:0061740"}


id: GO:0035041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unwinding of the condensed nuclear chromatin of an inactive male pronucleus after fertilization.","definition_xrefs":["GOC:bf","PMID:23352575","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"male pronucleus assembly","termid":"GO:0035039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0044085"],"is_obsolete":false,"name":"sperm DNA decondensation","synonyms":[{"name":"sperm chromatin decondensation","type":"exact"}],"termid":"GO:0035041"}


id: GO:0032808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lacrimal gland over time, from its formation to the mature structure. The lacrimal gland produces secretions that lubricate and protect the cornea of the eye.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"exocrine system development","termid":"GO:0035272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lacrimal gland development","termid":"GO:0032808"}


id: PBO:0057253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 454","termid":"PBO:0057253"}


id: MONDO:0012343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial abdominal aortic aneurysm","termid":"MONDO:0007031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial abdominal, 2","secondary_identifiers":["MEDGEN:339960","MESH:C565229","GARD:16492","OMIM:609782","UMLS:C1853364"],"synonyms":[{"name":"AAA2","type":"exact"},{"name":"aortic aneurysm, familial abdominal 2","type":"exact"},{"name":"aortic aneurysm, familial abdominal, 2","type":"exact"}],"termid":"MONDO:0012343","xrefs":{"Monarch":{"xref_id":"0012343"}}}


id: PBO:0081808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 1, Y-linked","termid":"PBO:0081808"}


id: PBO:0079659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 7","termid":"PBO:0079659"}


id: FYPO:0000186
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121678],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[121278],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[121270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[121394,121396,121395],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"FYPO:0000671"},{"annotations":[121220,121205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121468,121467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"},{"annotations":[121303],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121271,121547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121679],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[121267,121268],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_02252":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03143":null,"SJAG_03444":null,"SJAG_03449":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":16,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) 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type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta 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type"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_03596","SJAG_01143","SJAG_04522","SJAG_04280","SJAG_00118"],"name":"abnormal cell division during vegetative growth","references_by_uniquename":{"PMID:22300943":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02252","SJAG_03143","SJAG_03596","SJAG_03444","SJAG_03449","SJAG_04522","SJAG_02392","SJAG_00118","SJAG_02592"],"single_locus_genotype_uniquenames":["rga4delta","ace2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","agn1delta","man1delta","sep1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","mid2delta","mid1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pom1delta"],"synonyms":[{"name":"abnormal cell division","type":"broad"},{"name":"abnormal cell division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000186","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0085328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate; forms membrane-associated signal transduction complex with Vps15p to regulate protein sorting; activated by the GTP-bound form of Gpa1p; a fraction is localized, with Vps15p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0085328"}


id: GO:0140318
data:
  {"annotated_genes":["SJAG_04203","SJAG_04208","SJAG_01179","SJAG_03515","SJAG_01949","SJAG_01879","SJAG_05259","SJAG_02208","SJAG_03358","SJAG_00373","SJAG_02077","SJAG_02330","SJAG_01640","SJAG_01435","SJAG_04218","SJAG_00959","SJAG_03560","SJAG_02524","SJAG_03502","SJAG_04996","SJAG_03415"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90529,92272,118290],"is_not":false,"summary":null,"term":"GO:0140318"},{"annotations":[63528,65236,102961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140567"},{"annotations":[75388,80757,75197,80538,108146,80938,75743,69339,74979,76769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[109544,113802,105233,107155,109567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific protein and delivering it to a specific cellular location.","definition_xrefs":["PMID:18706423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00959":null,"SJAG_01179":null,"SJAG_01435":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02524":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04203":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2248891","Reactome:R-HSA-9662747","Reactome:R-HSA-9662818"],"synonyms":[{"name":"protein carrier activity","type":"related"},{"name":"protein transport chaperone","type":"related"}],"termid":"GO:0140318","terms_by_termid":{"GO:0008320":null,"GO:0015450":null,"GO:0140318":null,"GO:0140567":null}}


id: MONDO:0007249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptobrachydactyly is an extremely rare brachydactyly syndrome, characterized by short broad hands and feet with brachydactyly associated with congenital flexion contractures of the proximal and/or distal interphalangeal joints of the fingers, as well as syndactyly of feet. Polydactyly, septate vagina and urinary incontinence were also occasionally reported. Camptobrachydactyly has been described in 18 members of 1 family, suggesting an autosomal dominant inheritance. There have been no further descriptions in the literature since 1972.","definition_xrefs":["Orphanet:1319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptobrachydactyly","secondary_identifiers":["SCTID:733045005","MESH:C537967","OMIM:114150","MEDGEN:349399","UMLS:C1861963","GARD:1062"],"synonyms":[{"name":"camptobrachydactyly","type":"exact"},{"name":"short foot/brachydactyly of toes, camptodactyly, brachydactyly","type":"related"}],"termid":"MONDO:0007249","xrefs":{"Monarch":{"xref_id":"0007249"}}}


id: PATO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000561 length value (obsolete PATO:0000561)","termid":"PATO:0000561"}


id: PBO:0069932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1225, pseudogene","termid":"PBO:0069932"}


id: GO:0072319
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"A protein depolymerization process that results in the disassembly of vesicle coat proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle uncoating","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"vesicle coat disassembly","type":"exact"}],"termid":"GO:0072319","terms_by_termid":{"GO:0072318":null}}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: PATO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in a bearer by virtue of the bearer's reflecting lots of light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflectivity","termid":"PATO:0001297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glistening","synonyms":[{"name":"glossy","type":"exact"},{"name":"shiny","type":"exact"}],"termid":"PATO:0001373"}


id: PBO:0055389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2819","termid":"PBO:0055389"}


id: PR:O74359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 60 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.02","synonyms":[{"name":"Spom972h-SPBC28E12.02","type":"exact"}],"termid":"PR:O74359"}


id: PBO:0066060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPGEF4 antisense RNA 1","termid":"PBO:0066060"}


id: PBO:0064599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F1 divergent transcript","termid":"PBO:0064599"}


id: PATO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process.","definition_xrefs":["PATOC:PortlandMeetingFeb2015","PATOC:mb"],"direct_ancestors":[{"relation_name":"has_part","term_name":"hypotrophic","termid":"PATO:0000585"},{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerate","synonyms":[{"name":"degeneration","type":"narrow"}],"termid":"PATO:0000639"}


id: SO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including D-J-region with 5' UTR and 3' UTR, also designated as D-J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_gene_segment","synonyms":[{"name":"D-J-GENE","type":"exact"},{"name":"DJ gene","type":"exact"}],"termid":"SO:0000572"}


id: PBO:0012214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_level_of","termid":"PBO:0012214"}


id: PBO:0062958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 1","termid":"PBO:0062958"}


id: PBO:0003490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis12","termid":"PBO:0003490"}


id: PR:Q9US57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1002.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1002.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","synonyms":[{"name":"Spom972h-SPAC1002.01","type":"exact"}],"termid":"PR:Q9US57"}


id: PBO:0063217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 7","termid":"PBO:0063217"}


id: MONDO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"localized anterior staphyloma","secondary_identifiers":["MEDGEN:509936","SCTID:21946002","DOID:13787","UMLS:C0155362","ICD9:379.14"],"synonyms":[{"name":"anterior staphyloma, localised","type":"exact"},{"name":"anterior staphyloma, localized","type":"exact"}],"termid":"MONDO:0001799","xrefs":{"Monarch":{"xref_id":"0001799"}}}


id: MONDO:0016494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete regional variant of Guillain-Barre syndrome (obsolete MONDO:0016494)","secondary_identifiers":["Orphanet:231416"],"synonyms":[{"name":"regional variant of GBS","type":"exact"},{"name":"regional variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016494","xrefs":{"Monarch":{"xref_id":"0016494"}}}


id: PBO:0083168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF RSC8/YFR037C","termid":"PBO:0083168"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: MONDO:0014464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive encephalopathy with leukodystrophy due to DECR deficiency is a rare mitochondrial disease, which presents with neonatal hypotonia, central nervous system abnormalities (ventriculomegaly, corpus callosum hypoplasia, cerebellar atrophy), acquired microcephaly, failure to thrive, developmental delay and intermittent lactic acidosis provoked by catabolic stress (e.g. infection). Hyperlysinemia and elevated C10:2 carnitine can be detected in plasma. Later on, epilepsy, cerebellar ataxia, renal tubular acidosis, severe encephalopathy, dystonia, spastic quadriplegia and other complications may develop.","definition_xrefs":["Orphanet:431361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"progressive encephalopathy with leukodystrophy due to DECR deficiency","secondary_identifiers":["UMLS:C1857252","MESH:C565624","MEDGEN:346552","GARD:10327","OMIM:616034"],"synonyms":[{"name":"2,4-alpha dienoyl-CoA reductase deficiency","type":"related"},{"name":"2,4-dienoyl-CoA reductase deficiency","type":"exact"},{"name":"DECR deficiency with hyperlysinemia","type":"exact"},{"name":"DECRD","type":"related"},{"name":"dienoyl-CoA reductase deficiency","type":"related"},{"name":"progressive encephalopathy with leukodystrophy due to DECR deficiency","type":"exact"}],"termid":"MONDO:0014464","xrefs":{"Monarch":{"xref_id":"0014464"}}}


id: GO:0019034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in replicating the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral replication complex","termid":"GO:0019034"}


id: PBO:0044704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 5","termid":"PBO:0044704"}


id: FYPO:0009076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on sucrose carbon source","synonyms":[{"name":"increased growth on sucrose carbon source","type":"broad"},{"name":"increased vegetative cell growth on sucrose carbon source","type":"exact"}],"termid":"FYPO:0009076"}


id: PBO:0087893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription cofactor; forms complexes with Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; also binds Stb1p to regulate transcription at START; cell wall stress induces phosphorylation by Mpk1p, which regulates Swi6p localization; required for the unfolded protein response, independently of its known transcriptional coactivators","termid":"PBO:0087893"}


id: GO:0006817
data:
  {"annotated_genes":["SJAG_04241","SJAG_00547","SJAG_01033","SJAG_04990","SJAG_00233","SJAG_01059"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[117812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[111693,118530,114738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[101322],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phosphate ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate transport","type":"related"}],"termid":"GO:0006817","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: PBO:0063568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase C","termid":"PBO:0063568"}


id: GO:0055103
data:
  {"annotated_genes":["SJAG_00177","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990609"},{"annotations":[107706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180016"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a ligase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"ligase regulator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0055103","terms_by_termid":{"GO:0180016":null,"GO:1990609":null}}


id: PBO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 156 member A","termid":"PBO:0047106"}


id: GO:0035160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal tubes in an open tracheal system maintain their epithelial structure during the cell shape changes and movements that occur during the branching process.","definition_xrefs":["GOC:mtg_sensu","PMID:14681183","PMID:10694415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial structure maintenance","termid":"GO:0010669"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of epithelial integrity, open tracheal system","synonyms":[{"name":"maintenance of tracheal epithelial integrity","type":"exact"}],"termid":"GO:0035160"}


id: GO:1902639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propan-2-ol.","definition_xrefs":["GOC:mengo_curators","PMID:16346237","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"propan-2-ol metabolic process","synonyms":[{"name":"Isopropanol metabolic process","type":"exact"},{"name":"Isopropyl alcohol metabolic process","type":"exact"},{"name":"propan-2-ol metabolism","type":"exact"}],"termid":"GO:1902639"}


id: MONDO:0010830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis in which the cause of the disease is a mutation in the CLN8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"},{"relation_name":"is_a","term_name":"juvenile neuronal ceroid lipofuscinosis","termid":"MONDO:0019262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002039","MONDO:0002525","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 8","secondary_identifiers":["OMIM:600143","MEDGEN:374004","UMLS:C1838570","SCTID:703526007","GARD:17152","Orphanet:228354","DOID:0110723","MESH:C537952"],"synonyms":[{"name":"CLN8","type":"exact"},{"name":"CLN8 disease","type":"related"},{"name":"CLN8 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 8","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 8","type":"exact"}],"termid":"MONDO:0010830","xrefs":{"Monarch":{"xref_id":"0010830"}}}


id: MONDO:1011019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaricacidemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2-hydroxyglutaricacidemia, non-human animal","termid":"MONDO:1010244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-hydroxyglutaricacidemia, domestic cat","secondary_identifiers":["OMIA:001371-9685"],"termid":"MONDO:1011019","xrefs":{"Monarch":{"xref_id":"1011019"}}}


id: PBO:0053393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 322","termid":"PBO:0053393"}


id: PR:Q1MTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle control protein 50B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 89 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.11c","secondary_identifiers":["UniProtKB:Q1MTQ5"],"synonyms":[{"name":"Spom972h-TMEM30B","type":"exact"}],"termid":"PR:Q1MTQ5"}


id: MONDO:1012329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, ass","secondary_identifiers":["OMIA:001225-9793"],"termid":"MONDO:1012329","xrefs":{"Monarch":{"xref_id":"1012329"}}}


id: PBO:0062942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4","termid":"PBO:0062942"}


id: GO:0106293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + O2 = NAD + hydrogen peroxide (H2O2).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH oxidase H202-forming activity (obsolete GO:0106293)","termid":"GO:0106293"}


id: MONDO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the immune organ.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune system organ benign neoplasm","secondary_identifiers":["DOID:0060092"],"synonyms":[{"name":"immune organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000630","xrefs":{"Monarch":{"xref_id":"0000630"}}}


id: _global:decreased_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"different_in_magnitude_relative_to","termid":"_global:different_in_magnitude_relative_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_in_magnitude_relative_to","termid":"_global:decreased_in_magnitude_relative_to"}


id: GO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of heat generation.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heat generation","synonyms":[{"name":"down regulation of heat generation","type":"exact"},{"name":"down-regulation of heat generation","type":"exact"},{"name":"downregulation of heat generation","type":"exact"},{"name":"inhibition of heat generation","type":"narrow"}],"termid":"GO:0031651"}


id: PBO:0057658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1250","termid":"PBO:0057658"}


id: PBO:0080496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor D and EGF domains","termid":"PBO:0080496"}


id: PBO:0042492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 13","termid":"PBO:0042492"}


id: GO:0060646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell of the mammary placode becomes an internal epithelial cell of the mammary gland bud. Internal cells are small and of irregular shape.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal mammary gland bud epithelial cell differentiation","termid":"GO:0060646"}


id: PATO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's lacking a layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stratification","termid":"PATO:0002067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unstratified","termid":"PATO:0002069"}


id: PBO:0083878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferredoxin of the mitochondrial matrix; required for formation of cellular iron-sulfur proteins; involved in heme A biosynthesis; human homolog FDX1L can complement yeast by allowing growth during down-regulation of yeast YAH1","termid":"PBO:0083878"}


id: MONDO:0006607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sebaceous gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland disorder","secondary_identifiers":["MEDGEN:48599","ICD9:706.1","DOID:9098","MESH:D012625","EFO:1000763","SCTID:3441005","UMLS:C0036502"],"synonyms":[{"name":"disease of sebaceous gland","type":"exact"},{"name":"disease of sebaceous glands","type":"related"},{"name":"disease or disorder of sebaceous gland","type":"exact"},{"name":"disorder of sebaceous gland","type":"exact"},{"name":"sebaceous gland disease","type":"exact"},{"name":"sebaceous gland disease or disorder","type":"exact"}],"termid":"MONDO:0006607","xrefs":{"Monarch":{"xref_id":"0006607"}}}


id: MONDO:0011624
data:
  {"annotated_genes":["SJAG_04263"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88459],"is_not":false,"summary":null,"term":"MONDO:0011624"}]},"cv_name":"mondo","definition":"Transaldolase deficiency is an inborn error of the pentose phosphate pathway that presents in the neonatal or antenatal period with hydrops fetalis, hepatosplenomegaly, hepatic dysfunction, thrombocytopenia, anemia, and renal and cardiac abnormalities.","definition_xrefs":["Orphanet:101028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"transaldolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:606003","GARD:10445","MESH:C563207","SCTID:124252008","UMLS:C1291329","icd11.foundation:424536994","MEDGEN:224855","ICD9:277.6"],"synonyms":[{"name":"Eyaid syndrome","type":"related"},{"name":"TALDO deficiency","type":"exact"},{"name":"Taldo deficiency","type":"related"},{"name":"transaldolase deficiency","type":"exact"}],"termid":"MONDO:0011624","terms_by_termid":{"MONDO:0011624":null},"xrefs":{"Monarch":{"xref_id":"0011624"}}}


id: GO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol = D-myo-inositol 1,2-cyclic phosphate + diacylglycerol.","definition_xrefs":["EC:4.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["RHEA:17093","MetaCyc:3.1.4.10-RXN"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase (1D-myo-inositol-1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol inositolphosphohydrolase (cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidylinositol phosphodiesterase activity","type":"exact"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"}],"termid":"GO:0004436"}


id: GO:1904129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in axis elongation","termid":"GO:1901234"},{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in somitogenesis","synonyms":[{"name":"activation of convergent extension involved in somitogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in somitogenesis","type":"exact"}],"termid":"GO:1904129"}


id: GO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + putrescine(out) -> ADP + phosphate + putrescine(in).","definition_xrefs":["EC:7.6.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type polyamine transporter activity","termid":"GO:0015417"},{"relation_name":"is_a","term_name":"putrescine transmembrane transporter activity","termid":"GO:0015489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type putrescine transporter activity","secondary_identifiers":["EC:7.6.2.16","MetaCyc:ABC-25-RXN","RHEA:29995"],"synonyms":[{"name":"ATPase-coupled putrescine transmembrane transporter activity","type":"related"},{"name":"putrescine porter activity","type":"broad"},{"name":"putrescine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015594"}


id: PBO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter","termid":"PBO:0034604"}


id: MONDO:0013879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","secondary_identifiers":["MEDGEN:766536","UMLS:C3553622","OMIM:614743"],"synonyms":[{"name":"PFBMFT2","type":"related"},{"name":"aplastic anaemia","type":"broad"},{"name":"aplastic anemia","type":"broad"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 2","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 2","type":"exact"},{"name":"pulmonary fibrosis, idiopathic, susceptibility to","type":"related"}],"termid":"MONDO:0013879","xrefs":{"Monarch":{"xref_id":"0013879"}}}


id: MONDO:0800447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, platelet-type, 13, susceptibility to","secondary_identifiers":["MEDGEN:481244","OMIM:614009","UMLS:C3279614"],"synonyms":[{"name":"BDPLT13","type":"exact"},{"name":"bleeding disorder, platelet-type, 13, susceptibility to","type":"exact"},{"name":"bleeding disorder, susceptibility to, due to defective platelet thromboxane A2 receptor","type":"exact"},{"name":"susceptibility to platelet-type bleeding disorder 13","type":"exact"}],"termid":"MONDO:0800447","xrefs":{"Monarch":{"xref_id":"0800447"}}}


id: SO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is lost.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_premature_start_codon_loss_variant","termid":"SO:0001989"}


id: GO:0050655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dermatan sulfate proteoglycans, which consist of a core protein linked to a dermatan sulfate glycosaminoglycan. The dermatan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-hexuronic acid-beta-(1,3)-N-acetyl-D-galactosamine. The former can be a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate B proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulfate B proteoglycan metabolism","type":"exact"},{"name":"dermatan sulfate proteoglycan metabolism","type":"exact"},{"name":"dermatan sulphate proteoglycan metabolic process","type":"exact"},{"name":"dermatan sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050655"}


id: PBO:0077490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 210","termid":"PBO:0077490"}


id: PBO:0056543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence-like 2","termid":"PBO:0056543"}


id: MONDO:0007064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of SCID characterized by profound lymphopenia and very low immunoglobulin levels of all isotypes resulting in severe and recurrent opportunistic infections.","definition_xrefs":["Orphanet:277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency","secondary_identifiers":["CSP:1560-6660","GARD:5748","DOID:5810","MedDRA:10066367","NANDO:1200323","OMIM:102700","SCTID:44940001","ICD9:277.2","UMLS:C1863236","MEDGEN:354935","MESH:C531816","NANDO:2200696","NCIT:C3962"],"synonyms":[{"name":"ADA","type":"exact"},{"name":"ADA deficiency","type":"exact"},{"name":"ADA-SCID","type":"exact"},{"name":"SCID due to ADA deficiency","type":"exact"},{"name":"SCID due to ADA deficiency, delayed onset","type":"related"},{"name":"SCID due to ADA deficiency, early-onset","type":"exact"},{"name":"SCID due to ADA deficiency, late-onset","type":"related"},{"name":"SCID due to adenosine deaminase deficiency","type":"exact"},{"name":"adenosine deaminase deficiency","type":"exact"},{"name":"adenosine deaminase deficiency, partial","type":"related"},{"name":"adenosine deaminase deficiency, partial, Autosomal recessive, Somatic mosaicism","type":"exact"},{"name":"adenosine deaminase deficient severe combined immunodeficiency","type":"exact"},{"name":"partial ADA deficiency","type":"related"},{"name":"severe combined immunodeficiency due to ADA deficiency","type":"related"},{"name":"severe combined immunodeficiency due to ADA deficiency, Autosomal recessive, Somatic mosaicism","type":"exact"},{"name":"severe combined immunodeficiency due to adenosine deaminase deficiency","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency","type":"exact"}],"termid":"MONDO:0007064","xrefs":{"Monarch":{"xref_id":"0007064"}}}


id: MONDO:0958322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic 37","secondary_identifiers":["MEDGEN:1854940","UMLS:C5935567","OMIM:301118"],"termid":"MONDO:0958322","xrefs":{"Monarch":{"xref_id":"0958322"}}}


id: PBO:0064540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 1, pseudogene","termid":"PBO:0064540"}


id: MONDO:0016357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"neonatal osteosclerotic dysplasia","termid":"MONDO:0019702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysplastic cortical hyperostosis","secondary_identifiers":["Orphanet:646139","UMLS:C5190839","icd11.foundation:607086753","MEDGEN:1683894"],"termid":"MONDO:0016357","xrefs":{"Monarch":{"xref_id":"0016357"}}}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: PBO:0066316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein, mRNA processing factor 2","termid":"PBO:0066316"}


id: GO:1903216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["PMID:21370995","GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial processing","type":"broad"},{"name":"regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903216"}


id: GO:0010260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that occurs in an animal organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete animal organ senescence (obsolete GO:0010260)","termid":"GO:0010260"}


id: PBO:0051254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-22-2 (pseudogene)","termid":"PBO:0051254"}


id: GO:0051176
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90915,115695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"positively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of sulfur metabolic process","type":"narrow"},{"name":"positive regulation of sulfur metabolism","type":"exact"},{"name":"positive regulation of sulphur metabolic process","type":"exact"},{"name":"positive regulation of sulphur metabolism","type":"exact"},{"name":"stimulation of sulfur metabolic process","type":"narrow"},{"name":"up regulation of sulfur metabolic process","type":"exact"},{"name":"up-regulation of sulfur metabolic process","type":"exact"},{"name":"upregulation of sulfur metabolic process","type":"exact"}],"termid":"GO:0051176","terms_by_termid":{"GO:0090180":null}}


id: PBO:0046908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member C","termid":"PBO:0046908"}


id: PBO:0012580
data:
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id: MONDO:0005566
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id: GO:0032822
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id: PBO:0075616
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id: FYPO:0000668
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id: PBO:0048008
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id: PBO:0029771
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id: PBO:0086172
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id: MOD:00303
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id: MONDO:0008232
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id: MONDO:0100547
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id: PBO:0064073
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id: FYPO:0002831
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id: MONDO:0006743
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the endocrine glands with species of mycobacterium, most often mycobacterium tuberculosis.","definition_xrefs":["MESH:D014383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine tuberculosis","secondary_identifiers":["UMLS:C0041310","MEDGEN:52884"],"termid":"MONDO:0006743","xrefs":{"Monarch":{"xref_id":"0006743"}}}


id: PBO:0079360
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id: GO:0048741
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id: FYPO:0001142
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id: PBO:0075179
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id: PBO:0046874
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id: MONDO:0005366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of hepatitis B infection.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis B virus infection","termid":"MONDO:0005344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"chronic hepatitis B virus infection","secondary_identifiers":["MEDGEN:99834","MESH:D019694","EFO:0004239","UMLS:C0524909"],"synonyms":[{"name":"chronic Hepatitis B","type":"exact"},{"name":"hepatitis B infection, chronic","type":"exact"},{"name":"hepatitis B, chronic","type":"exact"}],"termid":"MONDO:0005366","xrefs":{"Monarch":{"xref_id":"0005366"}}}


id: PR:Q9P7X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13337:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.16","secondary_identifiers":["UniProtKB:Q9P7X0"],"synonyms":[{"name":"CybS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP23A10.16","type":"related"},{"name":"Spom972h-SDHD","type":"exact"},{"name":"succinate-ubiquinone reductase membrane anchor subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim18","type":"related"}],"termid":"PR:Q9P7X0"}


id: PBO:0091992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel, beta subunit, aldo-keto reductase","termid":"PBO:0091992"}


id: MONDO:0035423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid storage disease","termid":"MONDO:0015611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"triglyceride deposit cardiomyovasculopathy","secondary_identifiers":["Orphanet:565612","GARD:22267","SCTID:1279844009","ICD10CM:E75.5","MEDGEN:1830096","UMLS:C5680124"],"synonyms":[{"name":"Neutral lipid storage disease with severe cardiovascular involvement","type":"exact"},{"name":"TGCV","type":"exact"}],"termid":"MONDO:0035423","xrefs":{"Monarch":{"xref_id":"0035423"}}}


id: MONDO:1012942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disease that occurs in dogs due to a mutation in the CNP gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, CNP-related, dog","secondary_identifiers":["OMIA:002591-9615"],"termid":"MONDO:1012942","xrefs":{"Monarch":{"xref_id":"1012942"}}}


id: GO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCMP, deoxycytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dCMP biosynthetic process","synonyms":[{"name":"dCMP anabolism","type":"exact"},{"name":"dCMP biosynthesis","type":"exact"},{"name":"dCMP formation","type":"exact"},{"name":"dCMP synthesis","type":"exact"}],"termid":"GO:0046064"}


id: GO:0010791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via synthesis-dependent strand annealing.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281","GO:0006310"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via synthesis-dependent strand annealing","termid":"GO:0010791"}


id: SO:0001457
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a set of transcribed sequences from the same gene or expressed pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_cluster","synonyms":[{"name":"transcribed cluster","type":"exact"},{"name":"unigene cluster","type":"related"}],"termid":"SO:0001457"}


id: PBO:0087489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; involved in 3' end formation of mRNA via cleavage and polyadenylation of pre-mRNA; binds pre-mRNA via the zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of the endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; possible role in ubiquitination of Pap1p; relocalizes to the cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0087489"}


id: GO:0032697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of interleukin-14 production (obsolete GO:0032697)","synonyms":[{"name":"down regulation of interleukin-14 production","type":"exact"},{"name":"down-regulation of interleukin-14 production","type":"exact"},{"name":"downregulation of interleukin-14 production","type":"exact"},{"name":"inhibition of interleukin-14 production","type":"narrow"},{"name":"negative regulation of IL-14 production","type":"exact"},{"name":"negative regulation of interleukin-14 biosynthetic process","type":"narrow"}],"termid":"GO:0032697"}


id: GO:0038187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pathogen-associated molecular pattern (PAMP), a structure conserved among microbial species to initiate an innate immune response.","definition_xrefs":["GOC:bf","GOC:ar"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pattern recognition receptor activity","secondary_identifiers":["GO:0008329","Wikipedia:Pattern_recognition_receptor"],"synonyms":[{"name":"MAMP receptor activity","type":"narrow"},{"name":"PAMP receptor activity","type":"narrow"},{"name":"PRR","type":"exact"},{"name":"PRR activity","type":"exact"},{"name":"macrophage receptor activity","type":"related"},{"name":"microbe-associated molecular pattern receptor activity","type":"narrow"},{"name":"pathogen associated molecular pattern receptor activity","type":"narrow"},{"name":"signaling pattern recognition receptor activity","type":"related"}],"termid":"GO:0038187"}


id: GO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation","synonyms":[{"name":"B lymphocyte antigen processing and presentation","type":"exact"},{"name":"B-cell antigen processing and presentation","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002450"}


id: PBO:0031621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sporulation","termid":"PBO:0031621"}


id: GO:0008568
data:
  {"annotated_genes":["SJAG_04566","SJAG_01530"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75813,78234],"is_not":false,"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP.","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"microtubule destabilizing activity","termid":"GO:0170060"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"microtubule severing ATPase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9668419","EC:5.6.1.1","MetaCyc:3.6.4.3-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (tubulin-dimerizing)","type":"exact"},{"name":"katanin activity","type":"narrow"},{"name":"microtubule-severing ATPase activity","type":"exact"}],"termid":"GO:0008568","terms_by_termid":{"GO:0008568":null}}


id: PBO:0061096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 1","termid":"PBO:0061096"}


id: PBO:0052044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1","termid":"PBO:0052044"}


id: GO:0061025
data:
  {"annotated_genes":["SJAG_02595","SJAG_03848","SJAG_03403","SJAG_00204","SJAG_03552","SJAG_02315","SJAG_02414","SJAG_04887","SJAG_02924","SJAG_00870","SJAG_04978","SJAG_00380","SJAG_04513","SJAG_02204","SJAG_03889","SJAG_00430","SJAG_01324","SJAG_04023","SJAG_01467","SJAG_05184","SJAG_00826","SJAG_01697","SJAG_00557","SJAG_04739","SJAG_02351","SJAG_03670","SJAG_00810","SJAG_02241","SJAG_03536","SJAG_00899","SJAG_01633","SJAG_03347","SJAG_00171","SJAG_02878","SJAG_01379","SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61056,70553,73881,115661],"is_not":false,"summary":null,"term":"GO:0061025"},{"annotations":[80175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[76461,101645,72991,78963,81553,101441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[97859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[80433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[94246,97206,98289,112186,79570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"},{"annotations":[77425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[119538,73736,79629,79782,77948,111647,92460,114697,100021,78368,103024,102791,119583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[57855,77891,75661,79512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The membrane organization process that joins two lipid bilayers to form a single membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_00870":null,"SJAG_00899":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01467":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02351":null,"SJAG_02414":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04887":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0044801","GO:0006944","Wikipedia:Lipid_bilayer_fusion"],"synonyms":[{"name":"cellular membrane fusion","type":"exact"},{"name":"single-organism membrane fusion","type":"related"}],"termid":"GO:0061025","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0032220":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null,"GO:0061025":null}}


id: PBO:0028548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0028548"}


id: FYPO:0004625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which post-anaphase microtubule array organization is abnormal. Post-anaphase microtubule array organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of the post-anaphase microtubule array.","definition_xrefs":["PomBase:mah","PMID:1904186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal post-anaphase microtubule array organization","synonyms":[{"name":"abnormal PAA organization","type":"exact"},{"name":"abnormal post-anaphase array organization","type":"exact"},{"name":"abnormal post-anaphase microtubule array organisation","type":"exact"},{"name":"abnormal post-anaphase microtubule array organization during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase microtubule array organization during vegetative growth","type":"exact"}],"termid":"FYPO:0004625"}


id: FYPO:0005979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament bundle organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle. Actin filament bundles are assemblies of actin filaments organized along a single axis.","definition_xrefs":["GO:0061572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin filament bundle organization","synonyms":[{"name":"abnormal actin filament bundle organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament bundle organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005979"}


id: PR:Q9P7B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein STB3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.01","synonyms":[{"name":"Spom972h-SPBC1652.01","type":"exact"}],"termid":"PR:Q9P7B0"}


id: MONDO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PHKA2 gene, with no PHK activity in liver or erythrocytes.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to liver phosphorylase kinase deficiency","termid":"MONDO:0020693"},{"relation_name":"is_a","term_name":"glycogen storage disease IX","termid":"MONDO:0700291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"glycogen storage disease IXa1","secondary_identifiers":["DOID:0111042","NANDO:1200847","UMLS:C3694531","GARD:18386","MESH:C564421","MedDRA:10053242","MEDGEN:854172","MESH:D006015","NANDO:2201164","OMIM:306000","DOID:2751","SCTID:235908005","SCTID:41527003"],"synonyms":[{"name":"GSD VIII","type":"related"},{"name":"GSD VIII, formerly","type":"related"},{"name":"GSD type 9A","type":"exact"},{"name":"GSD type IXa","type":"exact"},{"name":"GSD9A","type":"exact"},{"name":"GSD9A1","type":"related"},{"name":"PHKA2 glycogen storage disease","type":"exact"},{"name":"PHKA2-related glycogen storage disease type IX","type":"exact"},{"name":"PYKL","type":"related"},{"name":"glycogen storage disease 8","type":"related"},{"name":"glycogen storage disease IXa","type":"broad"},{"name":"glycogen storage disease IXa1","type":"exact"},{"name":"glycogen storage disease VIII","type":"exact"},{"name":"glycogen storage disease VIII, formerly","type":"related"},{"name":"glycogen storage disease caused by mutation in PHKA2","type":"exact"},{"name":"glycogen storage disease type 9A","type":"exact"},{"name":"glycogen storage disease type IXa","type":"exact"},{"name":"glycogen storage disease type VIII","type":"exact"},{"name":"glycogen storage disease, type IXa1, X-linked recessive","type":"exact"},{"name":"glycogen storage disease, type IXa2, X-linked recessive","type":"exact"},{"name":"glycogenosis type 8","type":"related"},{"name":"glycogenosis type 9A","type":"exact"},{"name":"glycogenosis type IXa","type":"exact"},{"name":"glycogenosis type VIII","type":"exact"},{"name":"hepatic glycogen phosphorylase kinase deficiency","type":"exact"},{"name":"hepatic phosphorylase kinase deficiency","type":"related"},{"name":"liver glycogenosis, X-linked, type 1","type":"related"},{"name":"phosphorylase kinase deficiency of liver","type":"related"}],"termid":"MONDO:0010598","xrefs":{"Monarch":{"xref_id":"0010598"}}}


id: GO:0102287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + 3-oxooctanoyl-CoA + H2O = 4-coumaroylhexanoylmethane + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroylhexanoylmethane synthase activity (obsolete GO:0102287)","termid":"GO:0102287"}


id: PBO:0000890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein (predicted)","termid":"PBO:0000890"}


id: MONDO:0020023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete respiratory or mediastinal malformation (obsolete MONDO:0020023)","secondary_identifiers":["Orphanet:98045"],"termid":"MONDO:0020023","xrefs":{"Monarch":{"xref_id":"0020023"}}}


id: PBO:0075864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 4","termid":"PBO:0075864"}


id: PBO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 15","termid":"PBO:0050198"}


id: PBO:0072580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 3","termid":"PBO:0072580"}


id: SO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles:- Residue(i+1): -140 degrees > phi > -20 degrees, -90 degrees > psi > +40 degrees. Residue(i+2): -140 degrees > phi > -20 degrees, -90 degrees > psi > +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_left_handed_type_one","secondary_identifiers":["BS:00215"],"synonyms":[{"name":"beta turn left handed type one","type":"exact"},{"name":"beta_turn_il","type":"exact"},{"name":"type I' beta turn","type":"exact"},{"name":"type I' turn","type":"exact"}],"termid":"SO:0001134"}


id: PBO:0077482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 202","termid":"PBO:0077482"}


id: PBO:0079029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-2","termid":"PBO:0079029"}


id: GO:0008335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the structural integrity of the ring canals connecting the female germline cyst.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"ovarian nurse cell to oocyte transport","termid":"GO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0006810","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"female germline ring canal stabilization","synonyms":[{"name":"nurse cell ring canal stabilization","type":"narrow"},{"name":"ovarian ring canal stabilization","type":"narrow"}],"termid":"GO:0008335"}


id: MONDO:0007788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypertriglyceridemia","termid":"MONDO:0005347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypertriglyceridemia 1","secondary_identifiers":["MEDGEN:1787149","SCTID:34528009","UMLS:C5444012","OMIM:145750"],"synonyms":[{"name":"hypertriglyceridemia, familial","type":"exact"},{"name":"hypertriglyceridemia, susceptibility to","type":"related"}],"termid":"MONDO:0007788","xrefs":{"Monarch":{"xref_id":"0007788"}}}


id: GO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to one or more amino acids in a protein, occurring after the protein has been completely translated and released from the ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-translational protein acetylation","synonyms":[{"name":"post-translational protein amino acid acetylation","type":"exact"},{"name":"posttranslational protein amino acid acetylation","type":"exact"}],"termid":"GO:0034421"}


id: GO:0018294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via S-(8-alpha-FAD)-L-cysteine.","definition_xrefs":["RESID:AA0143"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via S-(8alpha-FAD)-L-cysteine (obsolete GO:0018294)","termid":"GO:0018294"}


id: PBO:0084670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial amino acid transporter; acts both as a glutamate uniporter and as an aspartate-glutamate exchanger; involved in nitrogen metabolism and nitrogen compound biosynthesis; human homolog SLC25A13 complements yeast null mutant","termid":"PBO:0084670"}


id: MONDO:0014121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant childhood-onset proximal spinal muscular atrophy","termid":"MONDO:0018190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant childhood-onset proximal spinal muscular atrophy with contractures","secondary_identifiers":["OMIM:615290","GARD:13222","Orphanet:363454","UMLS:C4747715","MEDGEN:1669929","DOID:0070349"],"synonyms":[{"name":"Lower extremity-predominant autosomal dominant proximal spinal muscular atrophy with contractures","type":"exact"},{"name":"SMALED2","type":"exact"},{"name":"autosomal dominant spinal muscular atrophy, lower extremity-predominant 2","type":"related"},{"name":"spinal muscular atrophy, LOWER extremity-predominant, 2, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, lower extremity-predominant 2, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, lower extremity-predominant, 2A, autosomal dominant","type":"exact"}],"termid":"MONDO:0014121","xrefs":{"Monarch":{"xref_id":"0014121"}}}


id: GO:0051421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of endo-(1->4)-beta-xylanase activity, the catalysis of the endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.","definition_xrefs":["EC:3.2.1.8","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of endo-1,4-beta-xylanase activity (obsolete GO:0051421)","synonyms":[{"name":"endo-1,4-beta-xylanase regulator","type":"related"},{"name":"xylanase regulator","type":"related"}],"termid":"GO:0051421"}


id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: PBO:0074379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 5","termid":"PBO:0074379"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["PMID:14755521","GOC:cvs","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: GO:0140656
data:
  {"annotated_genes":["SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118837],"is_not":false,"summary":null,"term":"GO:0140656"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an endodeoxyribonuclease.","definition_xrefs":["PMID:33836577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"endodeoxyribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140656","terms_by_termid":{"GO:0140656":null}}


id: GO:0106414
data:
  {"annotated_genes":["SJAG_03240","SJAG_01041","SJAG_03236","SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91337,106653,111623,120469],"is_not":false,"summary":null,"term":"GO:0106414"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: mRNA-uracil + NAD(P)+ = mRNA-dihydrouridine + NAD(P)H+ + H+.","definition_xrefs":["PMID:34798057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dihydrouridine synthase activity","termid":"GO:0106413"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mRNA dihydrouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106414","terms_by_termid":{"GO:0106414":null}}


id: GO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle formation","termid":"GO:0003218"}


id: PBO:0060399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4BPL2 intronic transcript 2","termid":"PBO:0060399"}


id: PBO:0034776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps902","termid":"PBO:0034776"}


id: GO:0045106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Disassembly of intermediate filaments by the removal of component monomers from a filament.","definition_xrefs":["ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament depolymerization","termid":"GO:0045106"}


id: PBO:0030606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_calcium_starvation","termid":"PBO:0030606"}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: MONDO:0957821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 88","secondary_identifiers":["DOID:0070587","MEDGEN:1845113","UMLS:C5882706","OMIM:620547"],"termid":"MONDO:0957821","xrefs":{"Monarch":{"xref_id":"0957821"}}}


id: GO:0060216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continuously provide erythroid, myeloid and lymphoid lineages throughout adulthood.","definition_xrefs":["PMID:15378083","PMID:15617691","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"definitive hemopoiesis","synonyms":[{"name":"definitive haematopoiesis","type":"related"},{"name":"definitive haemopoiesis","type":"exact"},{"name":"definitive hematopoiesis","type":"exact"}],"termid":"GO:0060216"}


id: SO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with antibodies, B cells or T cells.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epitope","secondary_identifiers":["http://en.wikipedia.org/wiki/Epitope"],"termid":"SO:0001018"}


id: PBO:0040543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GAT1 divergent transcript","termid":"PBO:0040543"}


id: GO:0030419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.","definition_xrefs":["GOC:mah","PMID:10069850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"nicotianamine metabolic process","termid":"GO:0030417"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"nicotianamine catabolic process","synonyms":[{"name":"nicotianamine breakdown","type":"exact"},{"name":"nicotianamine catabolism","type":"exact"},{"name":"nicotianamine degradation","type":"exact"}],"termid":"GO:0030419"}


id: MONDO:0008315
data:
  {"annotated_genes":["SJAG_04884","SJAG_00997","SJAG_03131","SJAG_04287","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88477,88476,88475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89182,89181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant tumor involving the prostate gland. The vast majority are carcinomas.","definition_xrefs":["NCIT:C7378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic urogenital tumor (obsolete MONDO:0017130)","termid":"MONDO:0017130"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"prostate neoplasm","termid":"MONDO:0021259"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_03131":null,"SJAG_04287":null,"SJAG_04884":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:10283","MESH:D011471","SCTID:399068003","UMLS:C0376358","MEDGEN:138169","ICD9:185"],"synonyms":[{"name":"NGP - new growth of prostate","type":"exact"},{"name":"cancer of prostate gland","type":"exact"},{"name":"hereditary prostate cancer","type":"narrow"},{"name":"malignant neoplasm of prostate","type":"exact"},{"name":"malignant neoplasm of prostate gland","type":"exact"},{"name":"malignant neoplasm of the prostate","type":"exact"},{"name":"malignant prostate gland neoplasm","type":"exact"},{"name":"malignant prostate neoplasm","type":"exact"},{"name":"malignant prostate tumor","type":"exact"},{"name":"malignant prostate tumour","type":"exact"},{"name":"malignant tumor of prostate","type":"exact"},{"name":"malignant tumor of the prostate","type":"exact"},{"name":"malignant tumour of prostate","type":"exact"},{"name":"malignant tumour of the prostate","type":"exact"},{"name":"prostate cancer, familial","type":"narrow"},{"name":"prostate gland cancer","type":"exact"},{"name":"prostate neoplasm","type":"broad"},{"name":"prostatic cancer","type":"exact"},{"name":"prostatic neoplasm","type":"broad"},{"name":"tumor of the prostate","type":"broad"},{"name":"tumour of the prostate","type":"broad"}],"termid":"MONDO:0008315","terms_by_termid":{"MONDO:0013872":null,"MONDO:0700275":null},"xrefs":{"Monarch":{"xref_id":"0008315"}}}


id: PBO:0111065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huamn GCFC2 ortholog","termid":"PBO:0111065"}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: PBO:0046725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 5","termid":"PBO:0046725"}


id: PBO:0016074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease (predicted)","termid":"PBO:0016074"}


id: MONDO:0011062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"aprosencephaly cerebellar dysgenesis","secondary_identifiers":["UMLS:C1832412","Orphanet:1126","MEDGEN:330459","MESH:C563331","OMIM:601374","GARD:4518"],"synonyms":[{"name":"aprosencephaly and cerebellar dysgenesis","type":"related"}],"termid":"MONDO:0011062","xrefs":{"Monarch":{"xref_id":"0011062"}}}


id: PBO:0005884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine, mitochondrial","termid":"PBO:0005884"}


id: MOD:01417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a monomethylated proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated proline","synonyms":[{"name":"Me1Pro","type":"exact"}],"termid":"MOD:01417"}


id: PBO:0072335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 21","termid":"PBO:0072335"}


id: PBO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 26","termid":"PBO:0080040"}


id: PBO:0062813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 4","termid":"PBO:0062813"}


id: MONDO:0017978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with disorder of sex development of gynecological interest (obsolete MONDO:0017978)","secondary_identifiers":["Orphanet:325638"],"synonyms":[{"name":"syndrome with DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017978","xrefs":{"Monarch":{"xref_id":"0017978"}}}


id: FYECO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which (R,Z)-10-hydroxyoctadec-8-enoic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ (8E,10S)-10-hydroxy-8-octadecenoic acid","synonyms":[{"name":"+ (R,Z)-10-hydroxyoctadec-8-enoic acid","type":"exact"}],"termid":"FYECO:0000421"}


id: GO:1903347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GOC:TermGenie","GOC:jz","GO_REF:0000058","PMID:25050009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"negatively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of bicellular tight junction assembly","synonyms":[{"name":"down regulation of tight junction assembly","type":"exact"},{"name":"down regulation of tight junction formation","type":"exact"},{"name":"down-regulation of tight junction assembly","type":"exact"},{"name":"down-regulation of tight junction formation","type":"exact"},{"name":"downregulation of tight junction assembly","type":"exact"},{"name":"downregulation of tight junction formation","type":"exact"},{"name":"inhibition of tight junction assembly","type":"narrow"},{"name":"inhibition of tight junction formation","type":"narrow"},{"name":"negative regulation of tight junction formation","type":"exact"}],"termid":"GO:1903347"}


id: MONDO:0011556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 1","secondary_identifiers":["MEDGEN:414403","UMLS:C2751544","OMIM:605462"],"synonyms":[{"name":"BCC1","type":"exact"},{"name":"basal cell carcinoma, multiple","type":"related"},{"name":"basal cell carcinoma, nonsyndromic","type":"related"},{"name":"basal cell carcinoma, somatic","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 1","type":"exact"},{"name":"multiple basal cell carcinoma","type":"related"}],"termid":"MONDO:0011556","xrefs":{"Monarch":{"xref_id":"0011556"}}}


id: PBO:0050929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 8 pseudogene","termid":"PBO:0050929"}


id: GO:2000172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branching morphogenesis of a nerve.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"regulates","term_name":"branching morphogenesis of a nerve","termid":"GO:0048755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching morphogenesis of a nerve","termid":"GO:2000172"}


id: GO:0032265
data:
  {"annotated_genes":["SJAG_06634","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77418,110254],"is_not":false,"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces xanthosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"XMP biosynthetic process","termid":"GO:0097293"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"XMP salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032265","terms_by_termid":{"GO:0032265":null}}


id: PBO:0091291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha (eEF1A) lysine 390 methyltransferase Efm6","termid":"PBO:0091291"}


id: PR:Q09849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp42 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit arp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.09","synonyms":[{"name":"Spom972h-arp42","type":"exact"},{"name":"actin-related protein 42 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromatin structure-remodeling complex subunit arp42 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09849"}


id: SO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a restriction enzyme.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_binding_site","synonyms":[{"name":"restriction endonuclease binding site","type":"exact"},{"name":"restriction enzyme binding site","type":"exact"}],"termid":"SO:0000061"}


id: PR:O59773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vid21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein vid21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.08c","synonyms":[{"name":"Spom972h-vid21","type":"exact"},{"name":"esa1-associated factor vid21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar import and degradation protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59773"}


id: PBO:0056003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056003"}


id: MONDO:1011033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary predisposition to color dilution alopecia in dogs due to a variation in the MLPH gene.","definition_xrefs":["PMID:34751460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coat color dilution, MLPH-related, dog","secondary_identifiers":["OMIA:000031-9615"],"termid":"MONDO:1011033","xrefs":{"Monarch":{"xref_id":"1011033"}}}


id: PBO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002258"}


id: GO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population contributing to sprouting angiogenesis.","definition_xrefs":["GOC:dph","GOC:tb","PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell proliferation","termid":"GO:0001935"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:0002043"}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: PATO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000552 absolute temperature sensitivity value (obsolete PATO:0000552)","termid":"PATO:0000552"}


id: PBO:0046040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma","termid":"PBO:0046040"}


id: FYPO:0002887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to telomere during vegetative growth","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002887"}


id: MONDO:0014228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fuchs' endothelial dystrophy in which the cause of the disease is a mutation in the AGBL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Fuchs endothelial, 8","secondary_identifiers":["MEDGEN:816128","UMLS:C3809798","GARD:18223","OMIM:615523"],"synonyms":[{"name":"AGBL1 Fuchs' endothelial dystrophy","type":"exact"},{"name":"FECD8","type":"related"},{"name":"Fuchs' endothelial dystrophy caused by mutation in AGBL1","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, 8","type":"exact"},{"name":"corneal dystrophy, Fuchs endothelial, type 8","type":"exact"}],"termid":"MONDO:0014228","xrefs":{"Monarch":{"xref_id":"0014228"}}}


id: PR:Q9P778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.12 gene.","definition_xrefs":["UniProtKB:Q9P778","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl-peptidase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.12","synonyms":[{"name":"DPP V (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DppV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1711.12","type":"exact"},{"name":"dipeptidyl-peptidase V (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P778"}


id: PBO:0110234
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BouQueT formation protein","termid":"PBO:0110234"}


id: GO:2000149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in ventricular septum morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis (obsolete GO:2000149)","termid":"GO:2000149"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: GO:0042159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"lipoprotein catabolic process","synonyms":[{"name":"lipoprotein breakdown","type":"exact"},{"name":"lipoprotein catabolism","type":"exact"},{"name":"lipoprotein degradation","type":"exact"}],"termid":"GO:0042159"}


id: FYPO:0005368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced during iron ion starvation measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of iron ion starvation-induced proteins","synonyms":[{"name":"decreased level of iron ion depletion-induced proteins","type":"exact"},{"name":"decreased level of iron ion deprivation-induced proteins","type":"exact"},{"name":"decreased level of iron ion starvation-induced proteins during mitotic cell cycle","type":"related"},{"name":"decreased level of iron ion starvation-induced proteins during vegetative growth","type":"exact"},{"name":"decreased level of proteins expressed during iron ion starvation","type":"exact"},{"name":"decreased level of proteins induced by iron ion starvation","type":"exact"},{"name":"decreased protein level of genes (normally) induced during iron starvation","type":"exact"},{"name":"reduced level of iron ion starvation-induced proteins","type":"exact"}],"termid":"FYPO:0005368"}


id: PBO:0071596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 13","termid":"PBO:0071596"}


id: MONDO:0023178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile X syndrome","termid":"MONDO:0010383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X syndrome type 1","termid":"MONDO:0023178","xrefs":{"Monarch":{"xref_id":"0023178"}}}


id: GO:0060461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the right lung are generated and organized.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"right lung development","termid":"GO:0060458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right lung morphogenesis","termid":"GO:0060461"}


id: PBO:0004792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Cwf10 (predicted)","termid":"PBO:0004792"}


id: MONDO:0006020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Zollinger-Ellison syndrome (obsolete MONDO:0006020)","synonyms":[{"name":"obsolete Zollinger-Ellison syndrome (disease)","type":"exact"}],"termid":"MONDO:0006020","xrefs":{"Monarch":{"xref_id":"0006020"}}}


id: PBO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0000245"}


id: GO:1903641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["GOC:TermGenie","PMID:11123201","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastric acid secretion","termid":"GO:0060454"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"positively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"activation of gastrin-induced gastric acid secretion","type":"narrow"},{"name":"up regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"up-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"upregulation of gastrin-induced gastric acid secretion","type":"exact"}],"termid":"GO:1903641"}


id: MONDO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An labyrinthitis caused by infection with Viruses.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral labyrinthitis","secondary_identifiers":["DOID:12357","MEDGEN:509997","UMLS:C0155508","ICD9:386.35","SCTID:409711008"],"synonyms":[{"name":"Viruses caused labyrinthitis","type":"exact"},{"name":"Viruses labyrinthitis","type":"exact"},{"name":"epidemic vertigo","type":"exact"},{"name":"epidemic vertigo (finding)","type":"exact"}],"termid":"MONDO:0001507","xrefs":{"Monarch":{"xref_id":"0001507"}}}


id: PBO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11 (predicted)","termid":"PBO:0001425"}


id: GO:0006386
data:
  {"annotated_genes":["SJAG_03761","SJAG_00637","SJAG_02242","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57113,61814,101820,118011],"is_not":false,"summary":null,"term":"GO:0006386"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript. RNA polymerase III has an intrinsic ability to terminate transcription upon incorporation of at least 4 contiguous U residues.","definition_xrefs":["PMID:27371117","GOC:mah","PMID:12944462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_02242":null,"SJAG_03689":null,"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"termination of RNA polymerase III transcription","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-73980","GO:0019225"],"synonyms":[{"name":"RNA polymerase III transcription termination","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol III promoter","type":"exact"},{"name":"transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006386","terms_by_termid":{"GO:0006386":null}}


id: PBO:0057474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 592","termid":"PBO:0057474"}


id: GO:0106360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-methylhexadecanoyl-CoA = 2-methylpentadecanal + formyl-CoA.","definition_xrefs":["RHEA:25379"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methylhexadecanoyl-CoA lyase activity (obsolete GO:0106360)","termid":"GO:0106360"}


id: GO:0007469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the antenna over time, from its formation to the mature structure. The antenna are the sensory structures on the head that are capable of detecting various environmental stimuli.","direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal development","termid":"GO:0007469"}


id: PBO:0089279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0089279"}


id: FYPO:0004159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation is abnormal. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["GO:0045143","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal homologous chromosome segregation","synonyms":[{"name":"abnormal chromosome disjunction at meiosis I","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I","type":"exact"},{"name":"abnormal homologous chromosome disjunction","type":"exact"},{"name":"chromosome missegregation during meiosis I","type":"related"},{"name":"homologous chromosome missegregation","type":"related"},{"name":"meiotic chromosome missegregation","type":"related"}],"termid":"FYPO:0004159"}


id: GO:0016110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid catabolic process","synonyms":[{"name":"tetraterpene catabolic process","type":"narrow"},{"name":"tetraterpene catabolism","type":"narrow"},{"name":"tetraterpenoid breakdown","type":"exact"},{"name":"tetraterpenoid catabolism","type":"exact"},{"name":"tetraterpenoid degradation","type":"exact"}],"termid":"GO:0016110"}


id: MONDO:0014872
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87932],"is_not":false,"summary":null,"term":"MONDO:0014872"}]},"cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the GNB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1H","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110866","MEDGEN:934725","UMLS:C4310758","GARD:16177","OMIM:617024"],"synonyms":[{"name":"CSNB1H","type":"exact"},{"name":"GNB3 congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in GNB3","type":"exact"},{"name":"congenital stationary night blindness type 1H","type":"exact"},{"name":"night blindness, congenital stationary, type 1H","type":"exact"}],"termid":"MONDO:0014872","terms_by_termid":{"MONDO:0014872":null},"xrefs":{"Monarch":{"xref_id":"0014872"}}}


id: PBO:0073427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SF3A2 pseudogene 1","termid":"PBO:0073427"}


id: PBO:0086680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP and mCherry fusion proteins localize to the nucleus and endoplasmic reticulum respectively; YHR214C-D has a paralog, YAR069C, that arose from a segmental duplication","termid":"PBO:0086680"}


id: GO:0071125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to epidermal growth factor receptor.","definition_xrefs":["PMID:15834425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-EGFR complex","synonyms":[{"name":"ITGAV-ITGB3-EGFR complex","type":"narrow"}],"termid":"GO:0071125"}


id: PBO:0065923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member of RAS oncogene family like 2B","termid":"PBO:0065923"}


id: PBO:0108895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 8","termid":"PBO:0108895"}


id: GO:0018393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a non-terminal lysine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal protein amino acid acetylation","termid":"GO:0006475"},{"relation_name":"is_a","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal peptidyl-lysine acetylation","termid":"GO:0018393"}


id: PBO:0058211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4503","termid":"PBO:0058211"}


id: GO:0030827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP biosynthetic process (obsolete GO:0030827)","synonyms":[{"name":"down regulation of cGMP biosynthetic process","type":"exact"},{"name":"down-regulation of cGMP biosynthetic process","type":"exact"},{"name":"downregulation of cGMP biosynthetic process","type":"exact"},{"name":"inhibition of cGMP biosynthetic process","type":"narrow"},{"name":"negative regulation of cGMP anabolism","type":"exact"},{"name":"negative regulation of cGMP biosynthesis","type":"exact"},{"name":"negative regulation of cGMP formation","type":"exact"},{"name":"negative regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030827"}


id: GO:2000974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphoid progenitor cell differentiation","termid":"GO:1905457"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"negatively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pro-B cell differentiation","synonyms":[{"name":"negative regulation of pro-B cell development","type":"related"},{"name":"negative regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000974"}


id: PBO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical carcinoma expressed PCNA regulatory lncRNA","termid":"PBO:0042129"}


id: PR:O74910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.12c","synonyms":[{"name":"De-localization of swi6 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf1","type":"exact"},{"name":"cryptic loci regulator 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74910"}


id: GO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rubidium ions (Rb+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete rubidium ion transport (obsolete GO:0035826)","synonyms":[{"name":"Rb+ transport","type":"exact"},{"name":"rubidium cation transport","type":"exact"}],"termid":"GO:0035826"}


id: PR:P12000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA ligase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10459:SF10","PRO:DNx","OMA:SCHPO00562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.01","secondary_identifiers":["UniProtKB:P12000"],"synonyms":[{"name":"DNA ligase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIG1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P12000"}


id: PBO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp0 (predicted)","termid":"PBO:0005714"}


id: PBO:0042448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 1","termid":"PBO:0042448"}


id: PBO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 Tsr402","termid":"PBO:0090376"}


id: MONDO:0007535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emphysema, hereditary pulmonary","secondary_identifiers":["OMIM:130700","UMLS:C1851718","MESH:C565057","MEDGEN:338765"],"synonyms":[{"name":"emphysema, hereditary pulmonary","type":"exact"}],"termid":"MONDO:0007535","xrefs":{"Monarch":{"xref_id":"0007535"}}}


id: FYPO:0000208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to cadmium ions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to cadmium ion","synonyms":[{"name":"abnormal cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to cadmium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000208"}


id: GO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.","definition_xrefs":["GOC:go_curators","PMID:12668634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"otic vesicle formation","termid":"GO:0030916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic placode formation","termid":"GO:0043049"}


id: PBO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12 (predicted)","termid":"PBO:0001661"}


id: GO:0060947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0060947"}


id: GO:0090381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of heart induction. Heart induction is the close range interaction between mesoderm and endoderm or ectoderm that causes cells to change their fates and specify the development of the heart.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of heart morphogenesis","termid":"GO:2000826"},{"relation_name":"regulates","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart induction","termid":"GO:0090381"}


id: PBO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 2","termid":"PBO:0042987"}


id: PATO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abut","termid":"PATO:0002435"}


id: GO:0061049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"physiological cardiac muscle hypertrophy","termid":"GO:0003301"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in cardiac muscle cell development","synonyms":[{"name":"cardiac muscle cell hypertrophy","type":"related"},{"name":"cardiomyocyte growth","type":"related"},{"name":"heart muscle cell growth","type":"related"}],"termid":"GO:0061049"}


id: GO:0019460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into other compounds, including fumarate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate (obsolete GO:0019460)","synonyms":[{"name":"glutamate catabolic process to fumarate","type":"narrow"},{"name":"glutamine breakdown to fumarate","type":"exact"},{"name":"glutamine degradation to fumarate","type":"exact"}],"termid":"GO:0019460"}


id: PBO:0024842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1 (predicted)","termid":"PBO:0024842"}


id: GO:0023059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The positive regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive adaptation of signaling pathway","synonyms":[{"name":"positive adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023059"}


id: FYPO:0000678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes are not segregated equally to the two spindle poles in the first meiotic nuclear division. For example, both homologs of one or more chromosomes may be segregated to the same spindle pole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"unequal homologous chromosome segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"chromosome non-disjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction during meiosis I","type":"related"},{"name":"impaired disjunction of homologous chromosomes","type":"exact"},{"name":"impaired homologous chromosome disjunction","type":"exact"},{"name":"meiosis I nondisjunction","type":"related"},{"name":"unequal chromosome disjunction during meiosis I","type":"exact"},{"name":"unequal homologous chromosome disjunction","type":"exact"}],"termid":"FYPO:0000678"}


id: GO:0034535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-8-methylnaphthalene + O2 = 2-hydroxy-8-methylchromene-2-carboxylate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-8-methylnaphthalene dioxygenase activity (obsolete GO:0034535)","termid":"GO:0034535"}


id: GO:0097631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:18725538","PMID:24591649","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of omegasome membrane (obsolete GO:0097631)","synonyms":[{"name":"integral to omegasome membrane","type":"narrow"},{"name":"omegasome integral membrane protein","type":"related"}],"termid":"GO:0097631"}


id: PBO:0116721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain cAMP effector 3","termid":"PBO:0116721"}


id: PBO:0066478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 5","termid":"PBO:0066478"}


id: PBO:0086751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to have a role in cell budding based on computational 'guilt by association' analysis","termid":"PBO:0086751"}


id: PR:P10505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.01c","secondary_identifiers":["UniProtKB:P10505"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC27","type":"exact"},{"name":"nuclear alteration protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear scaffold-like protein p76 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P10505"}


id: PBO:0074475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 pseudogene 1","termid":"PBO:0074475"}


id: PBO:0073729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem-loop binding protein","termid":"PBO:0073729"}


id: RO:HOM0000023
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a lineage-specific duplication subsequent to a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_in-paralogy_relationship_with","synonyms":[{"name":"in-paralogous to","type":"exact"},{"name":"inparalogy","type":"exact"},{"name":"symparalogy","type":"exact"}],"termid":"RO:HOM0000023"}


id: GO:0052379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent to which it enters into a second organism via the phagocytotic processes of the other organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of entry into other organism via phagocytosis involved in symbiotic interaction (obsolete GO:0052379)","synonyms":[{"name":"modulation by organism of entry into other organism via other organism phagocytosis during symbiotic interaction","type":"related"},{"name":"modulation by organism of entry into other organism via phagocytosis during symbiotic interaction","type":"related"}],"termid":"GO:0052379"}


id: GO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol catabolic process","termid":"GO:0072392"}


id: GO:0043443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone metabolic process (obsolete GO:0043443)","synonyms":[{"name":"2-propanone metabolic process","type":"exact"},{"name":"2-propanone metabolism","type":"exact"},{"name":"acetone metabolism","type":"exact"},{"name":"dimethyl ketone metabolic process","type":"exact"},{"name":"dimethyl ketone metabolism","type":"exact"},{"name":"propan-2-one metabolic process","type":"exact"},{"name":"propan-2-one metabolism","type":"exact"}],"termid":"GO:0043443"}


id: PBO:0035771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035771"}


id: GO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:22995177","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein kinase activity (obsolete GO:1904029)","termid":"GO:1904029"}


id: GO:0015331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the stereospecific transfer of asparagine or glutamine across a biological membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete asparagine/glutamine permease activity (obsolete GO:0015331)","synonyms":[{"name":"asparagine/glutamine permease activity","type":"exact"}],"termid":"GO:0015331"}


id: GO:0018854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity (obsolete GO:0018854)","termid":"GO:0018854"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: PBO:0085702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA splicing by the spliceosome; component of a complex containing Cef1p; interacts genetically with ISY1 and BUD13; may bind RNA; has similarity to S. pombe Cwf21p","termid":"PBO:0085702"}


id: GO:0003732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the cap structure at the 5' end of a small nuclear RNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA cap binding (obsolete GO:0003732)","synonyms":[{"name":"snRNA cap binding","type":"exact"}],"termid":"GO:0003732"}


id: PBO:0066926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 228","termid":"PBO:0066926"}


id: PBO:0062006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily I member 1 pseudogene","termid":"PBO:0062006"}


id: GO:1990599
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120818],"is_not":false,"summary":null,"term":"GO:1990599"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within 3' overhang single-stranded deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA endodeoxyribonuclease activity","termid":"GO:0000014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"3' overhang single-stranded DNA endodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990599","terms_by_termid":{"GO:1990599":null}}


id: GO:0017136
data:
  {"annotated_genes":["SJAG_04186","SJAG_01075","SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91934,79127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[106146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[91935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[116443,79128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[79129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[histone] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group from a histone to NAD, producing nicotinamide.","definition_xrefs":["PMID:24691964","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0019213","GO:0003674","GO:0033558","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone lysine deacetylase activity","type":"exact"},{"name":"SIR2","type":"related"},{"name":"histone deacetylase activity","type":"broad"},{"name":"sirtuin","type":"narrow"}],"termid":"GO:0017136","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0141222":null}}


id: GO:0061535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamate by a cell, in which the glutamate acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"glutamate secretion","termid":"GO:0014047"},{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"part_of","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}


id: FYPO:0006542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during mitosis is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during mitosis","synonyms":[{"name":"increased RNA accumulation during mitosis","type":"related"},{"name":"increased RNA level during M phase of mitotic cell cycle","type":"related"},{"name":"increased RNA level during mitosis during vegetative growth","type":"exact"},{"name":"increased RNA level during mitotic M phase","type":"related"},{"name":"increased mRNA level during mitosis","type":"narrow"},{"name":"increased transcript level during mitosis","type":"exact"}],"termid":"FYPO:0006542"}


id: FYPO:0003336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the actomyosin contractile ring for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to cell division site","termid":"FYPO:0002527"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased duration of protein localization to actomyosin contractile ring","synonyms":[{"name":"increased duration of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased duration of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to contractile ring","type":"exact"},{"name":"increased duration of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased duration of protein localization to mitotic contractile ring","type":"exact"},{"name":"increased duration of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"prolonged protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0003336"}


id: MONDO:0017641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete miscellaneous movement disorder due to neurodegenerative disease (obsolete MONDO:0017641)","secondary_identifiers":["Orphanet:306695"],"termid":"MONDO:0017641","xrefs":{"Monarch":{"xref_id":"0017641"}}}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","termid":"GO:0000252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity","secondary_identifiers":["EC:1.1.1.418","MetaCyc:RXN-11928"],"termid":"GO:0102175"}


id: PBO:0062015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 5","termid":"PBO:0062015"}


id: GO:0033523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by addition of ubiquitin groups.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B ubiquitination (obsolete GO:0033523)","termid":"GO:0033523"}


id: PBO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf4/Mdv1 (predicted)","termid":"PBO:0001150"}


id: GO:0071933
data:
  {"annotated_genes":["SJAG_01732","SJAG_03455","SJAG_02228","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64369,76278,77030,105208],"is_not":false,"summary":null,"term":"GO:0071933"}]},"cv_name":"molecular_function","definition":"Binding to an Arp2/3 complex, a protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_02228":null,"SJAG_03455":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Arp2/3 complex binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0071933","terms_by_termid":{"GO:0071933":null}}


id: MONDO:0033653
data:
  {"annotated_genes":["SJAG_01190"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87581],"is_not":false,"summary":null,"term":"MONDO:0033653"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619062","MEDGEN:1752734","GARD:16415","DOID:0070503","UMLS:C5436720"],"synonyms":[{"name":"MC4DN18","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 18","type":"exact"}],"termid":"MONDO:0033653","terms_by_termid":{"MONDO:0033653":null},"xrefs":{"Monarch":{"xref_id":"0033653"}}}


id: GO:0098732
data:
  {"annotated_genes":["SJAG_02056","SJAG_02268","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57203,71400,62105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098734"}]},"cv_name":"biological_process","definition":"The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a macromolecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule deacylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0098732","terms_by_termid":{"GO:0098734":null}}


id: PBO:0081568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 493","termid":"PBO:0081568"}


id: PBO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 10-67 (pseudogene)","termid":"PBO:0051463"}


id: MONDO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by a fungus.","definition_xrefs":["NCIT:C3245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal infectious disease","secondary_identifiers":["ICD9:110-118.99","ICD9:117.9","UMLS:C0026946","ICD10CM:B35-B49","DOID:1564","SCTID:3218000","MESH:D009181","MEDGEN:6486"],"synonyms":[{"name":"Fungi caused disease or disorder","type":"exact"},{"name":"Fungi disease or disorder","type":"exact"},{"name":"Fungi infection","type":"exact"},{"name":"Fungi infectious disease","type":"exact"},{"name":"fungal infection","type":"related"},{"name":"infection, fungal","type":"related"},{"name":"infections, Fungi","type":"related"},{"name":"mycoses","type":"related"},{"name":"mycosis","type":"exact"}],"termid":"MONDO:0002041","xrefs":{"Monarch":{"xref_id":"0002041"}}}


id: GO:0070866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex in the presence of sterols.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"sterol-dependent protein binding","termid":"GO:0070866"}


id: PBO:0075807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 6, pseudogene","termid":"PBO:0075807"}


id: GO:1902572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GOC:krc","PMID:20179351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine-type peptidase activity","synonyms":[{"name":"down regulation of serine protease activity","type":"narrow"},{"name":"down regulation of serine-type peptidase activity","type":"exact"},{"name":"down-regulation of serine protease activity","type":"narrow"},{"name":"down-regulation of serine-type peptidase activity","type":"exact"},{"name":"downregulation of serine protease activity","type":"narrow"},{"name":"downregulation of serine-type peptidase activity","type":"exact"},{"name":"inhibition of serine protease activity","type":"narrow"},{"name":"inhibition of serine-type peptidase activity","type":"narrow"},{"name":"negative regulation of serine protease activity","type":"narrow"}],"termid":"GO:1902572"}


id: PBO:0072536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 66","termid":"PBO:0072536"}


id: PBO:0066596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q","termid":"PBO:0066596"}


id: PBO:0002871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric 2,3-bisphosphoglycerate (BPG)-dependent phosphoglycerate mutase (PGAM), Gpm1","termid":"PBO:0002871"}


id: PBO:0012582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell Wall Lysis","termid":"PBO:0012582"}


id: GO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transition from a cell in the S phase to the G2 phase.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:hjd","PMID:15161931"],"gene_count":0,"genotype_count":0,"name":"obsolete S/G2 transition of mitotic cell cycle (obsolete GO:0002198)","synonyms":[{"name":"S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0002198"}


id: MONDO:0002797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma occurring in children.","definition_xrefs":["NCIT:C3997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood cerebellar neoplasm","termid":"MONDO:0003263"},{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood medulloblastoma","secondary_identifiers":["UMLS:C0278510","MEDGEN:75829","DOID:3869","GARD:9350","NANDO:2200090"],"synonyms":[{"name":"childhood medulloblastoma","type":"exact"},{"name":"medulloblastoma","type":"broad"},{"name":"medulloblastoma of childhood","type":"exact"},{"name":"medulloblastoma, childhood","type":"related"},{"name":"paediatric medulloblastoma","type":"exact"},{"name":"pediatric medulloblastoma","type":"exact"}],"termid":"MONDO:0002797","xrefs":{"Monarch":{"xref_id":"0002797"}}}


id: FYPO:0007658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell forms a mating projection with a flatter (less rounded) tip than normal.","definition_xrefs":["PMID:9606213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo morphology","termid":"FYPO:0000357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"shmoo with flat tip","synonyms":[{"name":"conjugation tube with flat tip","type":"exact"},{"name":"mating projection with flat tip","type":"exact"},{"name":"shmoo with flattened tip","type":"exact"}],"termid":"FYPO:0007658"}


id: PBO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0000809"}


id: GO:0015997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process monooxygenase activity (obsolete GO:0015997)","synonyms":[{"name":"coenzyme Q biosynthesis monooxygenase activity","type":"exact"},{"name":"coenzyme Q biosynthetic process monooxygenase activity","type":"exact"},{"name":"ubiquinone anabolism monooxygenase activity","type":"exact"},{"name":"ubiquinone biosynthetic process monooxygenase activity","type":"exact"},{"name":"ubiquinone formation monooxygenase activity","type":"exact"},{"name":"ubiquinone synthesis monooxygenase activity","type":"exact"}],"termid":"GO:0015997"}


id: PBO:0070587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 53","termid":"PBO:0070587"}


id: PBO:0077610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 1","termid":"PBO:0077610"}


id: GO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction. Stationary phase can be in response to limited nutrients or a build-up of toxic substances in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of stationary phase (obsolete GO:0060274)","termid":"GO:0060274"}


id: GO:1903512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytanic acid.","definition_xrefs":["GOC:TermGenie","PMID:16799769","GOC:dph","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phytanic acid metabolic process","synonyms":[{"name":"phytanic acid metabolism","type":"exact"}],"termid":"GO:1903512"}


id: PBO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrolectin","termid":"PBO:0043042"}


id: GO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-amino-2-methylpropanoate + pyruvate = 2-methyl-3-oxopropanoate + L-alanine.","definition_xrefs":["RHEA:18393","EC:2.6.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(R)-3-amino-2-methylpropionate-pyruvate transaminase activity","secondary_identifiers":["GO:0047314","MetaCyc:2.6.1.40-RXN","KEGG_REACTION:R02050","Reactome:R-HSA-909780"],"synonyms":[{"name":"(R)-3-amino-2-methylpropanoate aminotransferase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropanoate:pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate transaminase activity","type":"exact"},{"name":"(R)-3-amino-2-methylpropionate--pyruvate aminotransferase activity","type":"related"},{"name":"(R)-3-amino-2-methylpropionate-pyruvate aminotransferase activity","type":"exact"},{"name":"D-3-aminoisobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"D-3-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"D-3-aminoisobutyrate-pyruvate transaminase activity","type":"related"},{"name":"D-AIBAT activity","type":"related"},{"name":"D-beta-aminoisobutyrate:pyruvate aminotransferase activity","type":"related"},{"name":"beta-aminoisobutyrate--pyruvate transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0047305"}


id: GO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lutein metabolic process","synonyms":[{"name":"lutein metabolism","type":"exact"}],"termid":"GO:0062170"}


id: MONDO:0014041
data:
  {"annotated_genes":["SJAG_00507","SJAG_03223"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89148,89149],"is_not":false,"summary":null,"term":"MONDO:0014041"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_03223":null},"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554495","OMIM:615091","MEDGEN:767409"],"synonyms":[{"name":"AUTS19","type":"related"},{"name":"autism, susceptibility to, 19","type":"exact"},{"name":"autism, susceptibility to, type 19","type":"exact"},{"name":"susceptibility to autism 19","type":"related"}],"termid":"MONDO:0014041","terms_by_termid":{"MONDO:0014041":null},"xrefs":{"Monarch":{"xref_id":"0014041"}}}


id: MONDO:0007839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aase-Smith syndrome type I is a very rare genetic disorder characterized by the following congenital malformations: hydrocephalus (due to Dandy-Walker anomaly), cleft palate, and severe joint contractures.","definition_xrefs":["Orphanet:916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"Aase-Smith syndrome","secondary_identifiers":["MEDGEN:66316","MESH:C535332","GARD:5642","MedDRA:10063429","SCTID:718576001","UMLS:C0220686","OMIM:147800"],"synonyms":[{"name":"Aase-Smith I syndrome","type":"exact"},{"name":"Aase-Smith syndrome","type":"exact"},{"name":"Aase-Smith syndrome 1","type":"related"},{"name":"Aase-Smith syndrome I","type":"related"},{"name":"Aase-Smith syndrome type 1","type":"exact"},{"name":"Joint contractures with Other abnormalities","type":"related"},{"name":"hydrocephalus-cleft palate-joint contractures syndrome","type":"exact"}],"termid":"MONDO:0007839","xrefs":{"Monarch":{"xref_id":"0007839"}}}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: PBO:0005649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer delta subunit Ret2 (predicted)","termid":"PBO:0005649"}


id: PATO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour to progress or fail to progress during it's life time.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002095 neoplasm disposition (obsolete PATO:0002095)","termid":"PATO:0002095"}


id: MONDO:0021317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the cerebellum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of cerebellum","secondary_identifiers":["MEDGEN:57797","ICD9:191.6","NCIT:C3569","SCTID:449420002","UMLS:C0153640"],"synonyms":[{"name":"cancer of cerebellum","type":"exact"},{"name":"cancer of the cerebellum","type":"exact"},{"name":"cerebellar cancer","type":"exact"},{"name":"cerebellar neoplasm, malignant","type":"exact"},{"name":"cerebellar tumor, malignant","type":"exact"},{"name":"cerebellum cancer","type":"exact"},{"name":"malignant cerebellar neoplasm","type":"exact"},{"name":"malignant cerebellar neoplasms","type":"exact"},{"name":"malignant cerebellar tumor","type":"exact"},{"name":"malignant cerebellar tumour","type":"exact"},{"name":"malignant cerebellum neoplasm","type":"exact"},{"name":"malignant neoplasm of cerebellum","type":"exact"},{"name":"malignant neoplasm of the cerebellum","type":"exact"},{"name":"malignant tumor of cerebellum","type":"exact"},{"name":"malignant tumor of the cerebellum","type":"exact"},{"name":"malignant tumour of cerebellum","type":"exact"},{"name":"malignant tumour of the cerebellum","type":"exact"}],"termid":"MONDO:0021317","xrefs":{"Monarch":{"xref_id":"0021317"}}}


id: FYPO:0003248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromere inner repeat regions is higher than normal.","definition_xrefs":["PomBase:mah","PMID:22291963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone H3 at centromere inner repeat","synonyms":[{"name":"increased level of histone H3 at centromere imr","type":"exact"},{"name":"increased level of histone H3 at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased level of histone H3 at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003248"}


id: PBO:0111925
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi","termid":"PBO:0111925"}


id: MOD:00837
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (2)H deuterium atoms for four (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium tetrasubstituted residue","synonyms":[{"name":"D(H)4Res","type":"exact"}],"termid":"MOD:00837"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: MONDO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Senior-Loken syndrome (SLSN) is a very rare autosomal recessive oculo-renal disease characterized by the association of nephronophthisis (NPHP), a chronic kidney disease, with retinal dystrophy.","definition_xrefs":["Orphanet:3156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Senior-Loken syndrome","secondary_identifiers":["UMLS:C0403553","icd11.foundation:1975732692","GARD:322","NANDO:1201049","NCIT:C168588","OMIMPS:266900","MESH:C537580","MEDGEN:96045","DOID:0050576"],"synonyms":[{"name":"Loken Senior syndrome","type":"exact"},{"name":"SLSN","type":"exact"},{"name":"Senior Loken syndrome","type":"related"},{"name":"nephronophthisis with retinal dystrophy","type":"exact"},{"name":"renal dysplasia retinal aplasia","type":"related"},{"name":"renal dysplasia-retinal aplasia syndrome","type":"exact"},{"name":"renal-retinal syndrome","type":"exact"}],"termid":"MONDO:0017842","xrefs":{"Monarch":{"xref_id":"0017842"}}}


id: PBO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_mercury_ion","termid":"PBO:0030762"}


id: GO:0035266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a meristem, a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.","definition_xrefs":["GOC:bf","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem growth","termid":"GO:0035266"}


id: GO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of biting and mashing food with the teeth prior to swallowing.","definition_xrefs":["GOC:gvg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mastication","synonyms":[{"name":"chewing","type":"exact"}],"termid":"GO:0071626"}


id: PBO:0035978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation_during_vegetative_growth","termid":"PBO:0035978"}


id: PBO:0114487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I HSP40 co-chaperone; regulates HSP90 and HSP70 functions; acts as an adaptor that helps Rsp5p recognize and ubiquitinate misfolded, cytosolic proteins after heat shock; critical for determining cell size at Start as a function of growth rate; involved in protein translocation across membranes; forms cytotoxic amyloidogenic-like structures in vitro; DnaJ family member; chimeric protein in which the human p58IPK J domain replaces the yeast Ydj1p J domain can complement yeast ydj1 mutant","termid":"PBO:0114487"}


id: PBO:0086800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR285W is not an essential gene","termid":"PBO:0086800"}


id: GO:0060391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of SMAD protein signal transduction.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SMAD protein signal transduction","synonyms":[{"name":"positive regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"positive regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060391"}


id: FYPO:0007387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) does not occur, and the cell grows only from the new end.","definition_xrefs":["PomBase:mah","PMID:12007420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished NETO","termid":"FYPO:0001018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0005568","FYPO:0001985"],"is_obsolete":false,"name":"abolished NETO, with growth from new end","synonyms":[{"name":"NETO abolished, with growth from new end","type":"exact"},{"name":"abolished NETO during vegetative growth, with growth from new end","type":"exact"},{"name":"abolished NETO, with cell growth from new end","type":"exact"},{"name":"abolished NETO, with growth from new end during mitotic cell cycle","type":"related"},{"name":"abolished NETO, with growth from new end during vegetative growth","type":"exact"},{"name":"abolished NETO, with monopolar growth from new end","type":"exact"},{"name":"abolished cell growth mode switching, monopolar to bipolar, with growth from new end","type":"exact"},{"name":"abolished new end take-off, with growth from new end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth, with cell growth from new end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth, with growth from new end","type":"exact"}],"termid":"FYPO:0007387"}


id: PBO:0004178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein (predicted)","termid":"PBO:0004178"}


id: PBO:0034244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_output_(obsolete_RO:0002403)","termid":"PBO:0034244"}


id: MONDO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma arising from the vagina. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules within an abundant myxoid stroma.","definition_xrefs":["NCIT:C40268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botryoid rhabdomyosarcoma","termid":"MONDO:0002578"},{"relation_name":"is_a","term_name":"vaginal rhabdomyosarcoma","termid":"MONDO:0016095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"botryoid-type embryonal rhabdomyosarcoma of the vagina","secondary_identifiers":["MEDGEN:267758","DOID:6788","UMLS:C1511275"],"synonyms":[{"name":"botryoid rhabdomyosarcoma of vagina","type":"exact"},{"name":"botryoid-type embryonal rhabdomyosarcoma of the vagina","type":"exact"},{"name":"sarcoma Botryoides of the vagina","type":"exact"},{"name":"vagina botryoid rhabdomyosarcoma","type":"exact"}],"termid":"MONDO:0003994","xrefs":{"Monarch":{"xref_id":"0003994"}}}


id: GO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of compounds containing arsenic, including arsenates, arsenites, and arsenides. These include transport of such compounds away from sensitive areas and to compartments or complexes whose purpose is sequestration of arsenic or arsenic-containing compounds.","definition_xrefs":["PMID:11313333","PMID:20221439","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to arsenic-containing substance","termid":"GO:0046685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of arsenic-containing substance","synonyms":[{"name":"detoxification of arsenic","type":"exact"}],"termid":"GO:0071722"}


id: GO:0044550
data:
  {"annotated_genes":["SJAG_00469","SJAG_04032","SJAG_04031","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107360,59555,96007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[95953],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:0044550","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: FYPO:0001089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased glucosyltransferase activity","termid":"FYPO:0001089"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: PATO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resemblance to a cube (a 3-D shape with a square cross section).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"square","termid":"PATO:0000413"},{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuboid","synonyms":[{"name":"block-like","type":"related"},{"name":"cuboidal","type":"exact"}],"termid":"PATO:0001872"}


id: GO:0032478
data:
  {"annotated_genes":["SJAG_04568","SJAG_01865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93723,115758],"is_not":false,"summary":null,"term":"GO:0032478"}]},"cv_name":"cellular_component","definition":"A heterotetrameric complex located in the mitochondrial inner membrane that possesses polyprenyl diphosphate synthase activity involved in the synthesis of the isoprenoid chain of ubiquinone whose length varies between organisms. In S. pombe it is a heterotetramer of Dlp1 and Dps1.","definition_xrefs":["PMID:14519123","PMID:16262699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyl diphosphate synthase complex","termid":"GO:0032476"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"heterotetrameric polyprenyl diphosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterotetrameric decaprenyl diphosphate synthase complex","type":"narrow"}],"termid":"GO:0032478","terms_by_termid":{"GO:0032478":null}}


id: PBO:0073518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding glutamate rich protein like 3","termid":"PBO:0073518"}


id: GO:0050003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP = 2'-deoxy-5-methyl-5'-cytidylate + 7,8-dihydrofolate.","definition_xrefs":["EC:2.1.1.54","RHEA:11568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deoxycytidylate C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01670","MetaCyc:DEOXYCYTIDYLATE-C-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dCMP C-methyltransferase activity","type":"related"},{"name":"dCMP methyltransferase activity","type":"related"},{"name":"deoxycytidylate methyltransferase activity","type":"related"}],"termid":"GO:0050003"}


id: FYPO:0008140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal nuclear envelope morpbology in the vegetative growth phase of the life cycle in which the nuclear envelope lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"dilated nuclear envelope lumen","termid":"FYPO:0008140"}


id: PBO:0038575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 1, BRCA1 A complex subunit","termid":"PBO:0038575"}


id: PBO:0068488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 72, pseudogene","termid":"PBO:0068488"}


id: PBO:0002947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U24","termid":"PBO:0002947"}


id: PATO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplitude","termid":"PATO:0000080"}


id: PBO:0090325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol 14-demethylase (cytochrome P450) Erg11","termid":"PBO:0090325"}


id: PBO:0111769
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain","termid":"PBO:0111769"}


id: PBO:0059017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 3","termid":"PBO:0059017"}


id: GO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichostatin A stimulus.","definition_xrefs":["GOC:yaf","PMID:20181743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to trichostatin A","termid":"GO:0035983"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trichostatin A","termid":"GO:0035984"}


id: MONDO:0100539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum in which individuals may present with phenotypes ranging from hemiplegic migraines without epilepsy to developmental and epileptic encephalopathy with or without episodic hemiplegia or other forms of paresis. Symptoms and severity may vary within families.","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemiplegic migraine","termid":"MONDO:0000700"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"hemiplegic migraine-developmental and epileptic encephalopathy spectrum","termid":"MONDO:0100539","xrefs":{"Monarch":{"xref_id":"0100539"}}}


id: PBO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 3","termid":"PBO:0044495"}


id: PBO:0026891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore","termid":"PBO:0026891"}


id: MONDO:0044634
data:
  {"annotated_genes":["SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87071],"is_not":false,"summary":null,"term":"MONDO:0044634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01521":null},"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa-hearing loss-premature aging-short stature-facial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1615526","UMLS:C4540367","GARD:17903","OMIM:617763","DOID:0081175","Orphanet:494439"],"synonyms":[{"name":"retinitis pigmentosa-deafness-premature aging-short stature-facial dysmorphism syndrome","type":"exact"},{"name":"short stature, hearing loss, retinitis pigmentosa, and distinctive facies","type":"exact"}],"termid":"MONDO:0044634","terms_by_termid":{"MONDO:0044634":null},"xrefs":{"Monarch":{"xref_id":"0044634"}}}


id: PBO:0054646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2051","termid":"PBO:0054646"}


id: PBO:0071847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 42","termid":"PBO:0071847"}


id: PBO:0084710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane citrate transporter; member of the mitochondrial carrier family","termid":"PBO:0084710"}


id: PBO:0040455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11B divergent transcript","termid":"PBO:0040455"}


id: MONDO:0044227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dimples, facial (obsolete MONDO:0044227)","secondary_identifiers":["OMIM:126100"],"synonyms":[{"name":"cheek dimples","type":"related"},{"name":"dimples, FACIAL","type":"related"},{"name":"smiling dimples","type":"related"}],"termid":"MONDO:0044227","xrefs":{"Monarch":{"xref_id":"0044227"}}}


id: GO:0071165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a GINS complex, a heterotetrameric protein complex that associates with DNA replication origins and replication forks.","definition_xrefs":["GOC:mah","PMID:16990792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0065003","GO:0044085","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"GINS complex assembly","termid":"GO:0071165"}


id: PBO:0049960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 6","termid":"PBO:0049960"}


id: PBO:0054890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2304","termid":"PBO:0054890"}


id: PBO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Pla1","termid":"PBO:0003388"}


id: PBO:0116245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium transporting P-type ATPase P2 type, Pmc1","termid":"PBO:0116245"}


id: MONDO:0020052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial autosomal trisomy/tetrasomy (obsolete MONDO:0020052)","secondary_identifiers":["Orphanet:98132"],"termid":"MONDO:0020052","xrefs":{"Monarch":{"xref_id":"0020052"}}}


id: PBO:0058422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4791","termid":"PBO:0058422"}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: GO:0009683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid metabolic process","synonyms":[{"name":"IAA metabolic process","type":"exact"},{"name":"indole acetic acid metabolic process","type":"exact"},{"name":"indole acetic acid metabolism","type":"exact"},{"name":"indoleacetic acid metabolism","type":"exact"}],"termid":"GO:0009683"}


id: GO:0072273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric nephron are generated and organized. A metanephric nephron is the functional unit of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron morphogenesis","termid":"GO:0072028"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron morphogenesis","termid":"GO:0072273"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: GO:0014010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation","termid":"GO:0014010"}


id: GO:0005886
data:
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id: RO:0008503
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id: GO:0002122
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id: GO:0006278
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id: MONDO:0006569
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id: GO:0048099
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id: PBO:0049738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit beta","termid":"PBO:0049738"}


id: FYPO:0000154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the G0 to G1 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal negative regulation of G0 to G1 transition","synonyms":[{"name":"abnormal maintenance of G0 arrest","type":"exact"},{"name":"abnormal maintenance of G0 phase","type":"exact"},{"name":"abnormal maintenance of cell cycle quiescence","type":"exact"},{"name":"abnormal maintenance of cell quiescence","type":"exact"}],"termid":"FYPO:0000154"}


id: SO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cre-Recombination target sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"resolution_site","termid":"SO:0000947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loxP_site","synonyms":[{"name":"Cre-recombination target region","type":"related"},{"name":"loxP site","type":"exact"}],"termid":"SO:0000346"}


id: PBO:0049555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 17","termid":"PBO:0049555"}


id: PBO:0082691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the heterotetrameric MHF histone-fold complex; in humans the MHF complex interacts with both DNA and Mph1p ortholog FANCM to stabilize and remodel blocked replication forks and repair damaged DNA; mhf2 srs2 double mutants are MMS hypersensitive; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-X, also known as MHF2","termid":"PBO:0082691"}


id: GO:1905155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane invagination.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"positively_regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane invagination","synonyms":[{"name":"activation of membrane invagination","type":"narrow"},{"name":"up regulation of membrane invagination","type":"exact"},{"name":"up-regulation of membrane invagination","type":"exact"},{"name":"upregulation of membrane invagination","type":"exact"}],"termid":"GO:1905155"}


id: GO:0032087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of type IV site-specific deoxyribonuclease activity (obsolete GO:0032087)","synonyms":[{"name":"regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type IV restriction enzyme regulator","type":"related"}],"termid":"GO:0032087"}


id: MOD:01130
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SucPhencarb Lysyl","termid":"MOD:01130"}


id: PBO:0012302
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SRV2","termid":"PBO:0012302"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: PBO:0028042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization_at_minus_end","termid":"PBO:0028042"}


id: MONDO:1012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial myopathy, non-human animal","termid":"MONDO:1011791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy, dog","secondary_identifiers":["OMIA:000695-9615"],"termid":"MONDO:1012182","xrefs":{"Monarch":{"xref_id":"1012182"}}}


id: GO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast support cell differentiation","termid":"GO:0048906"}


id: GO:0098722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.","definition_xrefs":["PMID:18513950","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric stem cell division","termid":"GO:0098722"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_03602","SJAG_03681","SJAG_01210","SJAG_04280","SJAG_01401","SJAG_00071","SJAG_02392","SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117924,104306,110877,103566,90819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[118027,97762,100352,96446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: MONDO:0022559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system vasculitis that has a benign course, with acute onset of neurologic symptoms, usually in the form of severe headache and/or a focal neurologic event.","definition_xrefs":["PMID:17043471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign angiitis of the central nervous system","secondary_identifiers":["GARD:8704"],"synonyms":[{"name":"BACNS","type":"related"}],"termid":"MONDO:0022559","xrefs":{"Monarch":{"xref_id":"0022559"}}}


id: PBO:0076470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 6 homolog","termid":"PBO:0076470"}


id: PBO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein (predicted)","termid":"PBO:0004998"}


id: GO:0031633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatophore containing yellow pigment.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"xanthophore","termid":"GO:0031633"}


id: PBO:0064032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 66","termid":"PBO:0064032"}


id: PBO:0063813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 2","termid":"PBO:0063813"}


id: FYPO:0008235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of the nuclear RNA-directed RNA polymerase complex is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished nuclear RNA-directed RNA polymerase complex assembly","termid":"FYPO:0008235"}


id: PBO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 8","termid":"PBO:0047355"}


id: PR:Q9P6N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A post-GPI attachment to proteins factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01083","PANTHER:PTHR13148:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PER1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.07","secondary_identifiers":["UniProtKB:Q9P6N9"],"synonyms":[{"name":"Spom972h-PGAP3","type":"exact"}],"termid":"PR:Q9P6N9"}


id: PBO:0046305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH pseudogene 1","termid":"PBO:0046305"}


id: MONDO:0019242
data:
  {"annotated_genes":["SJAG_00944","SJAG_04149","SJAG_03069","SJAG_03290","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[88118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100058"},{"annotations":[86956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[87045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of branched-chain amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00944":null,"SJAG_02433":null,"SJAG_03069":null,"SJAG_03290":null,"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of branched-chain amino acid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:116020001","GARD:18971","MEDGEN:87452","UMLS:C0342712","icd11.foundation:5456505","Orphanet:79197"],"synonyms":[{"name":"branched chain amino acid metabolism disorder","type":"related"},{"name":"disorder of branched chain amino acid metabolism","type":"related"},{"name":"disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn branched-chain amino acid metabolic process disorder","type":"exact"},{"name":"inborn disorder of branched-chain amino acid metabolism","type":"exact"},{"name":"inborn error of branched-chain amino acid metabolic process","type":"exact"},{"name":"rare inborn error of branched-chain amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019242","terms_by_termid":{"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0014057":null,"MONDO:0100058":null},"xrefs":{"Monarch":{"xref_id":"0019242"}}}


id: GO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.","definition_xrefs":["GOC:kad","PMID:21934147","RHEA:53544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7-hydroxymethyl chlorophyll a reductase activity","secondary_identifiers":["EC:1.17.7.2"],"termid":"GO:0090415"}


id: MONDO:0011286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 7q34-q36.","definition_xrefs":["DOID:0110468","PMID:9781028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 13","secondary_identifiers":["UMLS:C1864199","GARD:22594","MEDGEN:350361","MESH:C566410","OMIM:603098"],"synonyms":[{"name":"DFNB13","type":"narrow"},{"name":"autosomal recessive deafness 13","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 13","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 13","type":"narrow"},{"name":"deafness, autosomal recessive 13","type":"narrow"}],"termid":"MONDO:0011286","xrefs":{"Monarch":{"xref_id":"0011286"}}}


id: GO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers.","definition_xrefs":["GOC:mtg_muscle","GOC:go_curators","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation","synonyms":[{"name":"myoblast cell differentiation","type":"exact"}],"termid":"GO:0045445"}


id: SO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme cleavage site where both strands are cut at the same position.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_cleavage_junction","termid":"SO:0001688"},{"relation_name":"part_of","term_name":"blunt_end_restriction_enzyme_cleavage_site","termid":"SO:0001691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_junction","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001693"}


id: GO:1990435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the upper end of a stereocilia tip link that provides the anchor in the stereocilia membrane on the side of the stereocilium where the tip link ends.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"upper tip-link density","synonyms":[{"name":"UTLD","type":"exact"}],"termid":"GO:1990435"}


id: PBO:0067515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 656, pseudogene","termid":"PBO:0067515"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["DOID:13676","SCTID:267660007","ICD9:379.07","UMLS:C0155357","icd11.foundation:982348440","MEDGEN:509932"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: GO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [beta-adrenergic receptor] + ATP = [beta-adrenergic receptor]-phosphate + ADP + H+.","definition_xrefs":["RHEA:19429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0140096","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"beta-adrenergic receptor kinase activity","secondary_identifiers":["EC:2.7.11.15","Reactome:R-HSA-8866268","Reactome:R-HSA-8851797","MetaCyc:2.7.11.15-RXN"],"synonyms":[{"name":"ADRBK1","type":"related"},{"name":"ATP:beta-adrenergic-receptor phosphotransferase activity","type":"broad"},{"name":"BARK1","type":"related"},{"name":"GRK2","type":"related"},{"name":"GRK3","type":"related"},{"name":"STK15","type":"related"},{"name":"[b-adrenergic-receptor] kinase activity","type":"related"},{"name":"adrenergic receptor kinase activity","type":"broad"},{"name":"beta-AR kinase activity","type":"related"},{"name":"beta-ARK","type":"related"},{"name":"beta-ARK 1","type":"related"},{"name":"beta-ARK 2","type":"related"},{"name":"beta-adrenergic receptor-specific kinase activity","type":"related"},{"name":"beta-adrenergic-receptor kinase (phosphorylating) activity","type":"related"},{"name":"beta-adrenergic-receptor kinase activity","type":"related"},{"name":"beta-adrenoceptor kinase 1 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase 2 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase activity","type":"related"},{"name":"beta-receptor kinase activity","type":"related"},{"name":"beta2ARK","type":"related"},{"name":"betaARK1","type":"related"}],"termid":"GO:0047696"}


id: PBO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase (predicted)","termid":"PBO:0003003"}


id: PBO:0086857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein of unknown function; localizes to stress granules induced by glucose deprivation; predicted to be involved in ribosome biogenesis","termid":"PBO:0086857"}


id: PBO:0035748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035748"}


id: GO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system contributing to different values of blood pressure oscillating with a regularity of approximately 24 hours. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"part_of","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by hormone","termid":"GO:0003067"}


id: PBO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase (predicted)","termid":"PBO:0005021"}


id: GO:1903563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any microtubule bundle formation that is involved in horsetail-astral microtubule organization.","definition_xrefs":["PMID:15647375","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle formation","termid":"GO:0001578"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"horsetail-astral microtubule organization","termid":"GO:0032118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0006810","GO:0140013","GO:0000226","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"microtubule bundle formation involved in horsetail-astral microtubule organization","synonyms":[{"name":"microtubule bundle formation involved in horsetail-astral microtubule array organization","type":"exact"},{"name":"microtubule bundle formation involved in horsetail-astral microtubule organisation","type":"exact"},{"name":"microtubule bundling involved in horsetail-astral microtubule array organization","type":"exact"},{"name":"microtubule bundling involved in horsetail-astral microtubule organisation","type":"exact"},{"name":"microtubule bundling involved in horsetail-astral microtubule organization","type":"exact"}],"termid":"GO:1903563"}


id: GO:0017025
data:
  {"annotated_genes":["SJAG_00692","SJAG_01523","SJAG_00650","SJAG_03120","SJAG_03900","SJAG_03095","SJAG_02458","SJAG_02174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58333,67561,72244,72394,73807,77499,78619,79049],"is_not":false,"summary":null,"term":"GO:0017025"}]},"cv_name":"molecular_function","definition":"Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).","definition_xrefs":["PMID:1509519","GOC:txnOH","GOC:jl","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TBP-class protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TATA-binding protein binding","type":"narrow"},{"name":"TBP binding","type":"narrow"},{"name":"TBP-related factor (TRF) protein binding","type":"narrow"}],"termid":"GO:0017025","terms_by_termid":{"GO:0017025":null}}


id: MONDO:0014185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q13 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from a partial deletion of the long arm of chromosome 3. Phenotype can be highly variable, but it is primarily characterized by significant developmental delay, postnatal growth above the mean, muscular hypotonia and distinctive facial features (such as broad and prominent forehead, hypertelorism, epicantic folds, anti-mongloid slanted eyes, ptosis, short philtrum, protruding lips with a full lower lip, high arched palate). Abnormal hypoplastic male genitalia and skeletal abnormalities are frequently present.","definition_xrefs":["Orphanet:1621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3q13.31 deletion syndrome","secondary_identifiers":["UMLS:C3809490","GARD:16573","MEDGEN:815820","DOID:0060418","MESH:C536808","SCTID:726705007","OMIM:615433"],"synonyms":[{"name":"3q13 microdeletion syndrome","type":"exact"},{"name":"Del(3)(q13)","type":"exact"},{"name":"chromosome 3q13.31 deletion syndrome","type":"exact"},{"name":"monosomy 3q13","type":"exact"}],"termid":"MONDO:0014185","xrefs":{"Monarch":{"xref_id":"0014185"}}}


id: PBO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 2","termid":"PBO:0050577"}


id: PBO:0119600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial general translational activator, PPR repeat Ppr10","termid":"PBO:0119600"}


id: PBO:0116194
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EG5","termid":"PBO:0116194"}


id: MONDO:0017895
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89167,89168,87689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A papillary or follicular thyroid gland carcinoma with a genetic component that develops within the same family. Current studies suggest that it is inherited in an autosomal dominant pattern. It is often multifocal and bilateral and usually affects younger patients.","definition_xrefs":["NCIT:C118829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial papillary or follicular thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5191836","GARD:8488","MEDGEN:1681657","Orphanet:319487"],"synonyms":[{"name":"FNMTC","type":"exact"},{"name":"familial nonmedullary thyroid gland carcinoma","type":"exact"},{"name":"familial pure nonmedullary thyroid carcinoma","type":"exact"}],"termid":"MONDO:0017895","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0017895"}}}


id: PBO:0076985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 3","termid":"PBO:0076985"}


id: PBO:0059566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1I, pseudogene","termid":"PBO:0059566"}


id: MONDO:0031077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 76","secondary_identifiers":["UMLS:C5774236","OMIM:620084","DOID:0070575","MEDGEN:1824009"],"synonyms":[{"name":"SPGF76","type":"exact"},{"name":"spermatogenic failure 76","type":"exact"}],"termid":"MONDO:0031077","xrefs":{"Monarch":{"xref_id":"0031077"}}}


id: PR:Q9URZ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- put4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-specific permease put4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.10c","synonyms":[{"name":"Spom972h-put4","type":"exact"}],"termid":"PR:Q9URZ3"}


id: PBO:0075714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 3","termid":"PBO:0075714"}


id: GO:0050622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + 2 A = HCN + CO2 + 2 AH2.","definition_xrefs":["RHEA:15821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine dehydrogenase (cyanide-forming) activity","secondary_identifiers":["EC:1.4.99.5","MetaCyc:1.4.99.5-RXN"],"synonyms":[{"name":"HCN synthase activity","type":"related"},{"name":"glycine:acceptor oxidoreductase (hydrogen-cyanide-forming)","type":"related"},{"name":"hydrogen cyanide synthase activity","type":"related"}],"termid":"GO:0050622"}


id: GO:0006097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glyoxylate cycle","secondary_identifiers":["MetaCyc:GLYOXYLATE-BYPASS","Wikipedia:Glyoxylate_cycle"],"synonyms":[{"name":"glyoxylate bypass","type":"exact"}],"termid":"GO:0006097"}


id: GO:0044592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of pullulan stimulus.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pullulan","termid":"GO:0044592"}


id: GO:0070414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["PMID:9797333","GOC:jp","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose metabolism in response to heat stress (obsolete GO:0070414)","synonyms":[{"name":"trehalose metabolic process involved in response to heat stress","type":"exact"}],"termid":"GO:0070414"}


id: GO:0071827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle organization","secondary_identifiers":["Reactome:R-HSA-174824"],"synonyms":[{"name":"plasma lipoprotein particle organisation","type":"exact"}],"termid":"GO:0071827"}


id: PBO:0046067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 2","termid":"PBO:0046067"}


id: GO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 melanocortin receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 melanocortin receptor binding","synonyms":[{"name":"type 1 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0070996"}


id: PBO:0068612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 63, pseudogene","termid":"PBO:0068612"}


id: GO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal.","definition_xrefs":["GOC:BHF","CL:0000115","GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell apoptotic process","synonyms":[{"name":"apoptosis of endothelial cells","type":"exact"},{"name":"endothelial cell apoptosis","type":"narrow"},{"name":"endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of endothelial cells","type":"exact"},{"name":"programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:0072577"}


id: MONDO:0020726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disorder that causes a gradual loss of kidney function, caused by a mutation in the MUC1 gene that leads to production of an abnormal mucin 1 protein, which deposits in the kidney and leads to slow loss of kidney function.","definition_xrefs":["GARD:0007002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"},{"relation_name":"is_a","term_name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","termid":"MONDO:0008264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"tubulointerstitial kidney disease, autosomal dominant, 2","secondary_identifiers":["GARD:7002","NCIT:C123171","Orphanet:88949","UMLS:C1868139","OMIM:174000","MEDGEN:358137"],"synonyms":[{"name":"ADMCKD1","type":"related"},{"name":"ADTKD-MUC1","type":"exact"},{"name":"MCKD1","type":"exact"},{"name":"MUC1-related autosomal dominant medullary cystic kidney disease","type":"exact"},{"name":"MUC1-related autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"MUCI-related ADTKD","type":"exact"},{"name":"Mckd","type":"related"},{"name":"autosomal dominant medullary cystic kidney disease without hyperuricemia","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease due to mutations in MUC1","type":"exact"},{"name":"medullary cystic kidney disease 1","type":"exact"},{"name":"medullary cystic kidney disease type 1","type":"exact"},{"name":"medullary cystic kidney disease, autosomal dominant","type":"exact"},{"name":"polycystic kidneys, medullary type","type":"related"}],"termid":"MONDO:0020726","xrefs":{"Monarch":{"xref_id":"0020726"}}}


id: MONDO:0020237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","secondary_identifiers":["Orphanet:98655"],"termid":"MONDO:0020237","xrefs":{"Monarch":{"xref_id":"0020237"}}}


id: GO:0070840
data:
  {"annotated_genes":["SJAG_00594","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106505,106839],"is_not":false,"summary":null,"term":"GO:0070840"}]},"cv_name":"molecular_function","definition":"Binding to a dynein complex, a protein complex that contains two or three dynein heavy chains and several light chains, and has microtubule motor activity.","definition_xrefs":["GOC:mah","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_02651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dynein complex binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045502"],"synonyms":[{"name":"dynein binding","type":"related"}],"termid":"GO:0070840","terms_by_termid":{"GO:0070840":null}}


id: PBO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8S rRNA (predicted)","termid":"PBO:0001034"}


id: PBO:0029996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies_during_glucose_starvation","termid":"PBO:0029996"}


id: GO:0009983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal tyrosine from a peptide.","definition_xrefs":["GOC:sm","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine aminopeptidase activity (obsolete GO:0009983)","synonyms":[{"name":"tyrosine aminopeptidase activity","type":"exact"}],"termid":"GO:0009983"}


id: GO:0016026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase core (obsolete GO:0016026)","synonyms":[{"name":"proteasome endopeptidase core","type":"exact"}],"termid":"GO:0016026"}


id: GO:0019298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme B (7-mercaptoheptanoylthreonine phosphate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["PMID:10940051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme B metabolic process","termid":"GO:0019297"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme B biosynthetic process","secondary_identifiers":["MetaCyc:P241-PWY"],"synonyms":[{"name":"coenzyme B anabolism","type":"exact"},{"name":"coenzyme B biosynthesis","type":"exact"},{"name":"coenzyme B formation","type":"exact"},{"name":"coenzyme B synthesis","type":"exact"}],"termid":"GO:0019298"}


id: FYPO:0004739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cytoskeleton during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004739"}


id: PBO:0041492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C12orf42 antisense RNA 1","termid":"PBO:0041492"}


id: GO:0046908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the spontaneous (nonenzymatic) formation of crystals in a solution, for example, calcium oxalate crystals in urine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of crystal formation (obsolete GO:0046908)","synonyms":[{"name":"negative regulation of crystal formation","type":"exact"},{"name":"negative regulation of mineralization","type":"related"}],"termid":"GO:0046908"}


id: PBO:0041868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 16, pseudogene","termid":"PBO:0041868"}


id: GO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"positive regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of GABA reuptake","type":"exact"},{"name":"positive regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051950"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: PBO:0068281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 2","termid":"PBO:0068281"}


id: GO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","PMID:17063141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"negatively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"down regulation of apoptosis in bone marrow","type":"exact"},{"name":"down-regulation of apoptosis in bone marrow","type":"exact"},{"name":"downregulation of apoptosis in bone marrow","type":"exact"},{"name":"inhibition of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"negative regulation of bone marrow cell apoptosis","type":"exact"},{"name":"negative regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of bone marrow cells","type":"exact"},{"name":"negative regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, bone marrow cells","type":"exact"}],"termid":"GO:0071866"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["GOC:sp","PMID:23706739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: PBO:0057372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548an","termid":"PBO:0057372"}


id: SO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region where there is an exchange of genetic material with another genomic region, occurring in somatic cells.","definition_xrefs":["SO:ke","NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:mitotic","type":"exact"},{"name":"INSDC_qualifier:mitotic_recombination","type":"exact"},{"name":"mitotic recombination region","type":"exact"}],"termid":"SO:0002154"}


id: PBO:0061692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 like","termid":"PBO:0061692"}


id: PBO:0079681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3B","termid":"PBO:0079681"}


id: MONDO:0008793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","secondary_identifiers":["OMIM:206570","MEDGEN:347234","UMLS:C1859783","MESH:C536367"],"synonyms":[{"name":"Corticomeningeal angiomatosis, myelination of the white substance of the centrum ovale, hemianopsia and marbled skin","type":"related"},{"name":"Divry-Van Bogaert syndrome","type":"related"},{"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","type":"exact"}],"termid":"MONDO:0008793","xrefs":{"Monarch":{"xref_id":"0008793"}}}


id: PBO:0005717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome non-ATPase regulatory subunit (predicted)","termid":"PBO:0005717"}


id: GO:0000045
data:
  {"annotated_genes":["SJAG_01876","SJAG_03100","SJAG_04655","SJAG_01073","SJAG_04991","SJAG_02441","SJAG_01467","SJAG_05017","SJAG_00004","SJAG_01283","SJAG_06309","SJAG_05289","SJAG_00114","SJAG_04294","SJAG_04232","SJAG_04502","SJAG_00029","SJAG_00079","SJAG_01274","SJAG_01251","SJAG_00645","SJAG_01561","SJAG_02699","SJAG_02640","SJAG_03851","SJAG_03170","SJAG_03435","SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60634,72280,72623,73325,73850,73880,74044,74463,75195,78556,78799,80205,80642,81406,81487,81513,82070,94803,96531,105537,106565],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[110543],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061736"},{"annotations":[110546,110639],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[61094,67127,68152,67063,59705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061753"}]},"cv_name":"biological_process","definition":"The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.","definition_xrefs":["GOC:autophagy","PMID:9412464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00645":null,"SJAG_01073":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03435":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagosome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"PAS formation","type":"narrow"},{"name":"autophagic vacuole assembly","type":"exact"},{"name":"autophagic vacuole formation","type":"related"},{"name":"autophagosome biosynthesis","type":"exact"},{"name":"autophagosome formation","type":"exact"}],"termid":"GO:0000045","terms_by_termid":{"GO:0000045":null,"GO:0061736":null,"GO:0061753":null,"GO:2000786":null}}


id: PBO:0083537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W; identified by gene-trapping, microarray analysis, and genome-wide homology searches","termid":"PBO:0083537"}


id: PBO:0050853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 5","termid":"PBO:0050853"}


id: RO:HOM0000037
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves a structure that has no other homologs in the species in which it is defined, and several homologous structures in another species.","definition_xrefs":["BGEE:curator"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_homology_relationship_with","synonyms":[{"name":"1 to many homologous to","type":"exact"},{"name":"1:many homology","type":"related"},{"name":"one-to-many homology","type":"exact"}],"termid":"RO:HOM0000037"}


id: MONDO:0010339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epilepsy, X-linked, with or without impaired intellectual development and dysmorphic features characterized by epilepsy, learning difficulties, macrocephaly, and aggressive behavior. It has been described in males from a four-generation kindred. It is transmitted as an X-linked recessive trait and is likely to be caused by mutations in the gene encoding synapsin I (Xp11.3-q12).","definition_xrefs":["Orphanet:85294"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"epilepsy, X-linked, with or without impaired intellectual development and dysmorphic features","termid":"MONDO:0859390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, X-linked 1, with variable learning disabilities and behavior disorders","secondary_identifiers":["OMIM:300491","UMLS:C5774177","GARD:16748","DOID:0112122","MEDGEN:1823951","MESH:C564505"],"synonyms":[{"name":"X-linked epilepsy-learning disabilities-behavior disorders syndrome","type":"exact"},{"name":"epilepsy, X-linked, with variable learning disabilities and behavior disorders","type":"related"},{"name":"epilepsy, X-linked, with variable learning disabilities and behavior disorders, X-linked recessive, X-linked dominant","type":"exact"},{"name":"epilepsy, X-linked, with variable learning disabilities and behaviour disorders","type":"related"},{"name":"epilepsy, X-linked, with variable learning disabilities and behaviour disorders, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0010339","xrefs":{"Monarch":{"xref_id":"0010339"}}}


id: PBO:0076585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 8B","termid":"PBO:0076585"}


id: MONDO:1012323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal paralysis, non-human animal","termid":"MONDO:1011928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal paralysis, horse","secondary_identifiers":["OMIA:001206-9796"],"termid":"MONDO:1012323","xrefs":{"Monarch":{"xref_id":"1012323"}}}


id: GO:1901048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:9847239"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in regulation of multicellular organism growth (obsolete GO:1901048)","synonyms":[{"name":"TGF-beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"}],"termid":"GO:1901048"}


