# terms

id: MONDO:0015862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal carcinoma (obsolete MONDO:0015862)","termid":"MONDO:0015862","xrefs":{"Monarch":{"xref_id":"0015862"}}}


id: MONDO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limited scleroderma (obsolete MONDO:0006832)","termid":"MONDO:0006832","xrefs":{"Monarch":{"xref_id":"0006832"}}}


id: PBO:0061251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 3","termid":"PBO:0061251"}


id: PBO:0049256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin and cysteine rich domain containing 2","termid":"PBO:0049256"}


id: GO:0010453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate commitment","termid":"GO:0010453"}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: MONDO:0012959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 11, susceptibility to","secondary_identifiers":["MEDGEN:382613","DOID:0111285","UMLS:C2675475","OMIM:612599"],"synonyms":[{"name":"PSORS11","type":"exact"},{"name":"psoriasis 11, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 11","type":"exact"}],"termid":"MONDO:0012959","xrefs":{"Monarch":{"xref_id":"0012959"}}}


id: MONDO:0010355
data:
  {"annotated_genes":["SJAG_01465","SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88919,88920,88921],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Claes-Jensen type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060809","OMIM:300534","SCTID:719161008","GARD:16744","MEDGEN:335139","Orphanet:85279","UMLS:C1845243","MESH:C564494"],"synonyms":[{"name":"MRXSCJ","type":"exact"},{"name":"MRXSJ","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"mental retardation, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"syndromic X-linked intellectual disability Claes-Jensen type","type":"exact"},{"name":"syndromic X-linked intellectual disability JARID1C-related","type":"exact"},{"name":"syndromic X-linked intellectual disability due to JARID1C mutation","type":"exact"},{"name":"syndromic X-linked mental retardation JARID1C-related","type":"exact"}],"termid":"MONDO:0010355","terms_by_termid":{"MONDO:0010355":null},"xrefs":{"Monarch":{"xref_id":"0010355"}}}


id: MONDO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anhidrosis in which the cause of the disease is a mutation in the ITPR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anhidrosis","termid":"MONDO:0006527"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"isolated anhidrosis with normal sweat glands","secondary_identifiers":["UMLS:C5568836","MEDGEN:1800259","Orphanet:468666","DOID:0060603","OMIM:106190","GARD:17843"],"synonyms":[{"name":"ANHD","type":"related"},{"name":"Dann-Epstein-Sohar syndrome","type":"exact"},{"name":"ITPR2 anhidrosis","type":"exact"},{"name":"anhidrosis caused by mutation in ITPR2","type":"exact"},{"name":"anhidrosis, isolated, with normal sweat glands","type":"related"},{"name":"isolated generalised anhidrosis with normal sweat glands","type":"related"},{"name":"isolated generalized anhidrosis with normal sweat glands","type":"related"}],"termid":"MONDO:0007118","xrefs":{"Monarch":{"xref_id":"0007118"}}}


id: MONDO:0971179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arterial tortuosity-bone fragility syndrome","secondary_identifiers":["OMIM:620908","MEDGEN:1855920","UMLS:C5935641"],"termid":"MONDO:0971179","xrefs":{"Monarch":{"xref_id":"0971179"}}}


id: MONDO:0100311
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012166"}]},"cv_name":"mondo","definition":"Any ataxia in which the causes of the disease is a perturbation of the sensory system, leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure","PMID:32965955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atactic disorder","termid":"MONDO:0100308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"is_obsolete":false,"name":"sensory ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:66020","UMLS:C0240991"],"termid":"MONDO:0100311","terms_by_termid":{"MONDO:0012166":null},"xrefs":{"Monarch":{"xref_id":"0100311"}}}


id: PBO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF complex transcription corepressor, Whi5","termid":"PBO:0090370"}


id: PBO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family (predicted)","termid":"PBO:0002429"}


id: PBO:0061419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y4","termid":"PBO:0061419"}


id: PBO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 38","termid":"PBO:0044351"}


id: GO:0015494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: aromatic amino acid(out) + H+(out) = aromatic amino acid(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"aromatic amino acid:proton symporter activity","synonyms":[{"name":"aromatic amino acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015494"}


id: GO:1902289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["GOC:TermGenie","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to oomycetes","termid":"GO:1902288"},{"relation_name":"negatively_regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to oomycetes","synonyms":[{"name":"down regulation of defense response to oomycetes","type":"exact"},{"name":"down-regulation of defense response to oomycetes","type":"exact"},{"name":"downregulation of defense response to oomycetes","type":"exact"},{"name":"inhibition of defense response to oomycetes","type":"narrow"}],"termid":"GO:1902289"}


id: MONDO:0016419
data:
  {"annotated_genes":["SJAG_00079","SJAG_01410","SJAG_04502","SJAG_00757","SJAG_02426","SJAG_04394","SJAG_02460","SJAG_03453","SJAG_04206","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88035,88036,88037,88038,88039,89186,89187,89188,89189,89190],"is_not":false,"summary":null,"term":"MONDO:0016419"}]},"cv_name":"mondo","definition":"Breast carcinoma that has developed in relatives of patients with history of breast carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03720":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary breast carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0346153","GARD:17142","ICD10CM:C50.3","MESH:C562840","ICD10CM:C50.2","OMIM:114480","ICD10CM:C50.6","SCTID:254843006","NCIT:C4503","Orphanet:227535","MEDGEN:87542"],"synonyms":[{"name":"breast cancer susceptibility, autosomal dominant, somatic mutation","type":"exact"},{"name":"breast cancer, early-onset, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"breast cancer, familial","type":"related"},{"name":"breast cancer, familial Male","type":"related"},{"name":"breast cancer, invasive ductal, autosomal dominant, somatic mutation","type":"exact"},{"name":"breast cancer, lobular, somatic","type":"exact"},{"name":"breast cancer, male, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"breast cancer, protection against, autosomal dominant, somatic mutation","type":"exact"},{"name":"breast cancer, somatic","type":"exact"},{"name":"breast cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"familial breast cancer","type":"exact"},{"name":"familial breast carcinoma","type":"exact"},{"name":"familial cancer of breast","type":"exact"},{"name":"familial cancer of the breast","type":"exact"},{"name":"hereditary breast cancer","type":"exact"},{"name":"hereditary breast carcinoma","type":"exact"}],"termid":"MONDO:0016419","terms_by_termid":{"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0016419"}}}


id: MOD:01935
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:22045808","RESID:AA0589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glucosyl-L-hydroxylysine","synonyms":[{"name":"(D-glucopyranosyl)oxy-L-lysine","type":"exact"},{"name":"CARBOHYD O-linked (Glc) hydroxylysine","type":"exact"},{"name":"O-glucosyl-L-hydroxylysine","type":"exact"}],"termid":"MOD:01935"}


id: PBO:0028214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arsenate_reductase_activity","termid":"PBO:0028214"}


id: PBO:0061530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSMCE1 divergent transcript","termid":"PBO:0061530"}


id: MONDO:0017396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"toxic dermatosis","secondary_identifiers":["GARD:21171","UMLS:C5680999","Orphanet:293815","MEDGEN:1842825"],"termid":"MONDO:0017396","xrefs":{"Monarch":{"xref_id":"0017396"}}}


id: PBO:0060558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 2","termid":"PBO:0060558"}


id: PBO:0067374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 475, pseudogene","termid":"PBO:0067374"}


id: PBO:0116392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular alpha-glucosidase Gto2","termid":"PBO:0116392"}


id: PBO:0087626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding","termid":"PBO:0087626"}


id: PBO:0085267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal 2,4-dienoyl-CoA reductase; auxiliary enzyme of fatty acid beta-oxidation; homodimeric enzyme required for growth and sporulation on petroselineate medium; expression induced during late sporulation and in the presence of oleate","termid":"PBO:0085267"}


id: PBO:0082911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteinyl-tRNA synthetase; CRS1 has two in-frame start codons resulting in a shorter isoform that is retained in the cytosol and a longer form that is mitochondrial; may interact with ribosomes, based on co-purification experiments; human gene CARS allows growth of the yeast haploid null mutant after sporulation of a heterozygous diploid","termid":"PBO:0082911"}


id: PBO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin I light chain Cam2","termid":"PBO:0002859"}


id: PBO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Two Interacting protein","termid":"PBO:0004713"}


id: MONDO:0017522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphalangy","termid":"MONDO:0017455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hyperphalangy, bilateral","secondary_identifiers":["Orphanet:295142","icd11.foundation:528541151"],"synonyms":[{"name":"supernumerary phalanges, bilateral","type":"exact"},{"name":"supernumerary phalanx, bilateral","type":"exact"}],"termid":"MONDO:0017522","xrefs":{"Monarch":{"xref_id":"0017522"}}}


id: GO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic salinity response","synonyms":[{"name":"response to hyperosmotic salt stress","type":"exact"},{"name":"salt tolerance","type":"related"}],"termid":"GO:0042538"}


id: GO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.","definition_xrefs":["PMID:16227571","PMID:20018852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"MSL complex","termid":"GO:0072487"}


id: GO:0051132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature natural killer T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["ISBN:0781735149","PMID:12154375","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell activation","synonyms":[{"name":"NK T lymphocyte activation","type":"exact"},{"name":"NK T-cell activation","type":"exact"},{"name":"NK T-lymphocyte activation","type":"exact"},{"name":"NKT cell activation","type":"exact"},{"name":"NT cell activation","type":"exact"},{"name":"natural T cell activation","type":"exact"},{"name":"natural killer T cell activation","type":"exact"}],"termid":"GO:0051132"}


id: PBO:0085796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate","termid":"PBO:0085796"}


id: PATO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000216 heart rate (obsolete PATO:0000216)","termid":"PATO:0000216"}


id: PBO:0017949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc7/UbcP3","termid":"PBO:0017949"}


id: GO:0019283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"he chemical reactions and pathways resulting in the formation of L-methionine from L-homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["GOC:go_curators","MetaCyc:PWY-702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"'de novo' L-methionine biosynthetic process","termid":"GO:0071266"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine formation from O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0019283"}


id: PBO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp42","termid":"PBO:0002483"}


id: MONDO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Adams-Oliver syndrome (obsolete MONDO:0000718)","termid":"MONDO:0000718","xrefs":{"Monarch":{"xref_id":"0000718"}}}


id: PBO:0015657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 RhoGEF Gef1","termid":"PBO:0015657"}


id: PBO:0086841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein with similarity to asparagine synthetases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YML096W is not an essential gene and partially overlaps the verified gene RAD10","termid":"PBO:0086841"}


id: MOD:01462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-proline alpha imino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated proline","termid":"MOD:01462"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: GO:0099509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099509"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: GO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA1 clathrin adaptor (obsolete GO:0005907)","synonyms":[{"name":"AP1","type":"related"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0005907"}


id: PR:Q92347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.02c","secondary_identifiers":["UniProtKB:Q92347"],"synonyms":[{"name":"Spom972h-NOP9","type":"exact"},{"name":"pumilio domain-containing protein nop9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92347"}


id: GO:0033227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dsRNA, double-stranded ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"dsRNA transport","termid":"GO:0033227"}


id: PBO:0054856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2270","termid":"PBO:0054856"}


id: PBO:0073193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W","termid":"PBO:0073193"}


id: PBO:0065528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 (gene/pseudogene)","termid":"PBO:0065528"}


id: PBO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rapamycin","termid":"PBO:0031319"}


id: MONDO:0025113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of birds which are raised as a source of meat or eggs for human consumption and are usually found in barnyards, hatcheries, etc. The concept is differentiated from bird diseases which is for diseases of birds not considered poultry and usually found in zoos, parks, and the wild.","definition_xrefs":["MESH:D011201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poultry disease","synonyms":[{"name":"disease, poultry","type":"related"},{"name":"diseases, poultry","type":"related"},{"name":"poultry disease","type":"exact"}],"termid":"MONDO:0025113","xrefs":{"Monarch":{"xref_id":"0025113"}}}


id: PBO:0114532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase kink, Knk1","termid":"PBO:0114532"}


id: FYPO:0007643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal in centromere outer repeat regions during G0 phase.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during G0","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during G0","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during G0","type":"exact"}],"termid":"FYPO:0007643"}


id: GO:0010984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"}


id: PBO:0029856
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_outer_repeat","termid":"PBO:0029856"}


id: PBO:0074597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9B","termid":"PBO:0074597"}


id: PBO:0038807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 11","termid":"PBO:0038807"}


id: GO:0005782
data:
  {"annotated_genes":["SJAG_02496","SJAG_00947","SJAG_00706","SJAG_00702","SJAG_04823","SJAG_02630","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61540,72411,107269,113849,116764,117782,120337],"is_not":false,"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody lumen","termid":"GO:0031907"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"peroxisomal matrix","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031909"],"synonyms":[{"name":"peroxisomal lumen","type":"exact"}],"termid":"GO:0005782","terms_by_termid":{"GO:0005782":null}}


id: PBO:0075059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-22","termid":"PBO:0075059"}


id: PR:P87140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00614","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.10c","secondary_identifiers":["UniProtKB:P87140"],"synonyms":[{"name":"Spom972h-COPG1","type":"exact"},{"name":"gamma-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87140"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: RO:0008505
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein one organism creates a structure or environment that is lived in by another organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creates_habitat_for","termid":"RO:0008505"}


id: MONDO:1011015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar degeneration that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"cerebellar degeneration, non-human animal","termid":"MONDO:1010243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration, chicken","secondary_identifiers":["OMIA:001221-9031"],"termid":"MONDO:1011015","xrefs":{"Monarch":{"xref_id":"1011015"}}}


id: PBO:0064223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C epsilon 1","termid":"PBO:0064223"}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: MONDO:0007279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 17q24.","definition_xrefs":["DOID:0110260","PMID:7704021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerulean cataract","termid":"MONDO:0020374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 7","secondary_identifiers":["GARD:15046","OMIM:115660"],"synonyms":[{"name":"CCA1","type":"narrow"},{"name":"CTRCT7","type":"exact"},{"name":"cataract 7","type":"exact"},{"name":"cataract 7, cerulean type","type":"related"},{"name":"cataract type 7","type":"exact"},{"name":"cataract, congenital, cerulean type, 1","type":"related"},{"name":"cerulean type cataract 7","type":"narrow"},{"name":"congenital cerulean type cataract 1","type":"narrow"}],"termid":"MONDO:0007279","xrefs":{"Monarch":{"xref_id":"0007279"}}}


id: PBO:0059662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 28","termid":"PBO:0059662"}


id: MONDO:0018624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"headache disorder","termid":"MONDO:0021146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous intracranial hypotension","secondary_identifiers":["icd11.foundation:1304151002","GARD:21854","MEDGEN:155914","NORD:1901","Orphanet:443180","UMLS:C0751731"],"synonyms":[{"name":"spontaneous cerebrospinal fluid leak","type":"exact"}],"termid":"MONDO:0018624","xrefs":{"Monarch":{"xref_id":"0018624"}}}


id: PBO:0086101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for accurate chromosome segregation during meiosis; involved in meiotic telomere clustering (bouquet formation) and telomere-led rapid prophase movements; functions with meiosis-specific telomere-binding protein Ndj1p; CSM4 has a paralog, MPS2, that arose from the whole genome duplication","termid":"PBO:0086101"}


id: PBO:0064278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing J1","termid":"PBO:0064278"}


id: PBO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035706"}


id: PBO:0082190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; involved in detoxification of lignocellulose-derived aldehydes; catalyzes the reduction of furan, aliphatic and aromatic aldehydes using either NADH or NADPH as co-factor; membrane of the quinone oxidoreductase subfamily of the medium-chain dehydrogenase/reductase family; null mutant displays sensitivity to DNA damaging agents; protein abundance increases in response to DNA replication stress","termid":"PBO:0082190"}


id: PBO:0011062
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approver_email","termid":"PBO:0011062"}


id: PBO:0053216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 13","termid":"PBO:0053216"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: GO:0009047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11498577","PMID:1568251","GOC:jl","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"dosage compensation by hyperactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0009047"}


id: PBO:0001179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubp5 interacting protein Ftp105","termid":"PBO:0001179"}


id: PBO:0076563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3D","termid":"PBO:0076563"}


id: FYPO:0001933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to hydroxyurea is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea. The most common abnormality is for the cell cycle to progress as in the absence of hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular response to hydroxyurea","termid":"FYPO:0001932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to hydroxyurea","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to hydroxyurea during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following hydroxyurea exposure","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to HU","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0001933"}


id: PBO:0045121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C1B","termid":"PBO:0045121"}


id: GO:0097625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have a pH above 7. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"low-affinity basic amino acid transmembrane transporter activity","synonyms":[{"name":"low affinity basic amino acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097625"}


id: MONDO:0008605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb, Nonopposable","secondary_identifiers":["OMIM:190600","MESH:C536562","UMLS:C2931238","MEDGEN:444008"],"synonyms":[{"name":"TPT","type":"related"},{"name":"non-opposable triphalangeal thumb","type":"related"},{"name":"triphalangeal thumb non opposable","type":"related"},{"name":"triphalangeal thumb, Nonopposable","type":"exact"}],"termid":"MONDO:0008605","xrefs":{"Monarch":{"xref_id":"0008605"}}}


id: PBO:0048590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 4 pseudogene","termid":"PBO:0048590"}


id: PBO:0069331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 590, pseudogene","termid":"PBO:0069331"}


id: PBO:0116290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly variable glycoprotein localized to cell wall via GPI anchor; serine/threonine rich and highly similar to HPF1 haze-protective mannoprotein; necessary and sufficient for haze-positive phenotype in brewing strains which correlates with an expansion in the N-terminal serine-rich region; transcript is induced in both high and low pH environments","termid":"PBO:0116290"}


id: PBO:0088133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; member of the multidrug resistance family; YCR023C is not an essential gene","termid":"PBO:0088133"}


id: PBO:0050467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOX transcript antisense RNA","termid":"PBO:0050467"}


id: GO:1900944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of isoprene metabolic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"regulation of hemiterpene metabolic process","type":"exact"},{"name":"regulation of hemiterpene metabolism","type":"exact"},{"name":"regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900944"}


id: PBO:0072572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory subunit M2","termid":"PBO:0072572"}


id: PBO:0083531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SNX41","termid":"PBO:0083531"}


id: PBO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 1","termid":"PBO:0048007"}


id: GO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:tb","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of RNA location","termid":"GO:0051237"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"maintenance of pole plasm mRNA location","secondary_identifiers":["GO:0048122"],"synonyms":[{"name":"maintenance of oocyte pole plasm mRNA localization","type":"exact"},{"name":"maintenance of pole plasm mRNA localization","type":"related"}],"termid":"GO:0046594"}


id: MOD:02053
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-phenylalanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-phenylalanine residue","synonyms":[{"name":"XlnkPhe","type":"exact"}],"termid":"MOD:02053"}


id: GO:0070573
data:
  {"annotated_genes":["SJAG_01542","SJAG_04858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60949,61932],"is_not":false,"summary":null,"term":"GO:0070573"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a dipeptide by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metalloexopeptidase activity","termid":"GO:0008235"},{"relation_name":"is_a","term_name":"dipeptidase activity","termid":"GO:0016805"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01542":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"metallodipeptidase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-2065355","Reactome:R-HSA-2022398","Reactome:R-HSA-2022405"],"synonyms":[{"name":"metallo-exo-dipeptidase activity","type":"exact"},{"name":"metalloexodipeptidase activity","type":"exact"}],"termid":"GO:0070573","terms_by_termid":{"GO:0070573":null}}


id: MONDO:0030030
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87236],"is_not":false,"summary":null,"term":"MONDO:0030030"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"is_obsolete":false,"name":"Nizon-Isidor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1715748","OMIM:618872","UMLS:C5394350"],"synonyms":[{"name":"NIZIDS","type":"exact"},{"name":"NIZON-ISIDOR SYNDROME","type":"exact"},{"name":"nizon-isidor syndrome","type":"exact"}],"termid":"MONDO:0030030","terms_by_termid":{"MONDO:0030030":null},"xrefs":{"Monarch":{"xref_id":"0030030"}}}


id: GO:1990403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the brain over time, from its formation to the mature structure.","definition_xrefs":["PMID:15918910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic brain development","termid":"GO:1990403"}


id: GO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium beat frequency","secondary_identifiers":["GO:0036144"],"synonyms":[{"name":"regulation of flagellum beat frequency","type":"related"},{"name":"regulation of microtubule-based flagellum beat frequency","type":"exact"}],"termid":"GO:0003356"}


id: GO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane organization (obsolete GO:0044803)","termid":"GO:0044803"}


id: PBO:0082506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificty) and Som1p","termid":"PBO:0082506"}


id: GO:0033945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cellobiose from the reducing end of xyloglucans consisting of a beta-(1->4) linked glucan carrying alpha-D-xylosyl groups on O-6 of the glucose residues. To be a substrate, the first residue must be unsubstituted, the second residue may bear a xylosyl group, whether further glycosylated or not, and the third residue, which becomes the new terminus by the action of the enzyme, is preferably xylosylated, but this xylose residue must not be further substituted.","definition_xrefs":["EC:3.2.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oligoxyloglucan reducing-end-specific cellobiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.150-RXN"],"synonyms":[{"name":"oligoxyloglucan reducing end-specific cellobiohydrolase activity","type":"related"},{"name":"oligoxyloglucan reducing-end cellobiohydrolase activity","type":"related"}],"termid":"GO:0033945"}


id: PBO:0081181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger GATA like protein 1","termid":"PBO:0081181"}


id: MONDO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland medullary carcinoma (obsolete MONDO:0002823)","termid":"MONDO:0002823","xrefs":{"Monarch":{"xref_id":"0002823"}}}


id: MONDO:0019259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical phenylketonuria is a severe form of phenylketonuria (PKU) an inborn error of amino acid metabolism characterized in untreated patients by severe intellectual deficit and neuropsychiatric complications.","definition_xrefs":["Orphanet:79254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0006025"],"is_obsolete":false,"name":"classic phenylketonuria","secondary_identifiers":["GARD:18982","icd11.foundation:2084504393","MEDGEN:199655","MedDRA:10034875","UMLS:C0751434"],"synonyms":[{"name":"classic PKU","type":"exact"}],"termid":"MONDO:0019259","xrefs":{"Monarch":{"xref_id":"0019259"}}}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["GOC:BHF","PMID:10966616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: FYPO:0006233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuolar membrane","termid":"FYPO:0004249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to vacuolar membrane","synonyms":[{"name":"decreased protein localisation to vacuolar membrane","type":"exact"},{"name":"decreased protein localization in vacuolar membrane","type":"exact"},{"name":"decreased protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to vacuole membrane","type":"exact"},{"name":"reduced protein localization to vacuolar membrane","type":"exact"}],"termid":"FYPO:0006233"}


id: MOD:00442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N'-dimethylated L-arginine with secondary loss of an N,N'-carbodiimide molecular fragment.","definition_xrefs":["PubMed:18688235","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N'-dimethylated L-arginine with secondary neutral loss of N,N'-carbodiimide","synonyms":[{"name":"dCDI-NNMe2+Arg","type":"exact"}],"termid":"MOD:00442"}


id: PBO:0048062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 11","termid":"PBO:0048062"}


id: GO:1904564
data:
  {"annotated_genes":["SJAG_02895","SJAG_02994"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69227,101967],"is_not":false,"summary":null,"term":"GO:1904564"}]},"cv_name":"cellular_component","definition":"A heterotetrameric complex with weak ATPase activity that is capable of scaffolding a 4Fe-4S (iron-sulfur) cluster. In yeast, the subunits are Nbp35 and Cfd1. In humans, the subunits are NUBP1 and NUBP2.","definition_xrefs":["GO_REF:0000088","PMID:26195633","GOC:bhm","PMID:34660592","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02895":null,"SJAG_02994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"cytosolic [4Fe-4S] assembly scaffold complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CIA scaffold complex","type":"exact"},{"name":"Nbp35-Cfd1 ATPase complex","type":"exact"},{"name":"cytosolic scaffold protein complex","type":"related"}],"termid":"GO:1904564","terms_by_termid":{"GO:1904564":null}}


id: FYECO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfite was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sulfite","termid":"FYECO:0000234"}


id: PBO:0044367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, testis, pseudogene","termid":"PBO:0044367"}


id: GO:1905722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18949025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of trypanothione biosynthetic process","synonyms":[{"name":"regulation of trypanothione anabolism","type":"exact"},{"name":"regulation of trypanothione biosynthesis","type":"exact"},{"name":"regulation of trypanothione formation","type":"exact"},{"name":"regulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905722"}


id: GO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.","definition_xrefs":["CL:0000540","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration","secondary_identifiers":["Wikipedia:Neuron_migration","Wikipedia:Neural_development#Neuron_migration"],"synonyms":[{"name":"neuron chemotaxis","type":"exact"},{"name":"neuron guidance","type":"related"},{"name":"neuronal migration","type":"exact"}],"termid":"GO:0001764"}


id: CHEBI:27570
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine","termid":"CHEBI:27570"}


id: PBO:0086911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase","termid":"PBO:0086911"}


id: GO:0006412
data:
  {"annotated_genes":["SJAG_03919","SJAG_04814","SJAG_00544","SJAG_03658","SJAG_04744","SJAG_05560","SJAG_01643","SJAG_04862","SJAG_00748","SJAG_04351","SJAG_05221","SJAG_01368","SJAG_03433","SJAG_03788","SJAG_01074","SJAG_01259","SJAG_01287","SJAG_03094","SJAG_04281","SJAG_03859","SJAG_01721","SJAG_04873","SJAG_01853","SJAG_01117","SJAG_03545","SJAG_02020","SJAG_00513","SJAG_04494","SJAG_02017","SJAG_03176","SJAG_00912","SJAG_05271","SJAG_04291","SJAG_04176","SJAG_01608","SJAG_03192","SJAG_02096","SJAG_02292","SJAG_01194","SJAG_00541","SJAG_00315","SJAG_04452","SJAG_02312","SJAG_00465","SJAG_02428","SJAG_00420","SJAG_04493","SJAG_02071","SJAG_00786","SJAG_00226","SJAG_00921","SJAG_02331","SJAG_00537","SJAG_01609","SJAG_04900","SJAG_01630","SJAG_04918","SJAG_01132","SJAG_01512","SJAG_04490","SJAG_03189","SJAG_05265","SJAG_02067","SJAG_04959","SJAG_01588","SJAG_01413","SJAG_01269","SJAG_03197","SJAG_00726","SJAG_04342","SJAG_01829","SJAG_00579","SJAG_03626","SJAG_00749","SJAG_04856","SJAG_02755","SJAG_04216","SJAG_04019","SJAG_03666","SJAG_04689","SJAG_00034","SJAG_01659","SJAG_01577","SJAG_01058","SJAG_04188","SJAG_01676","SJAG_02738","SJAG_02894","SJAG_02585","SJAG_02861","SJAG_04378","SJAG_03794","SJAG_02224","SJAG_03133","SJAG_01128","SJAG_04324","SJAG_01411","SJAG_01366","SJAG_04174","SJAG_02995","SJAG_06253","SJAG_01522","SJAG_03568","SJAG_01548","SJAG_04482","SJAG_02904","SJAG_04893","SJAG_03040","SJAG_04244","SJAG_02597","SJAG_02510","SJAG_02891","SJAG_04283","SJAG_02628","SJAG_04160","SJAG_05008","SJAG_01591","SJAG_04889","SJAG_16456","SJAG_00086","SJAG_03501","SJAG_02592","SJAG_04093","SJAG_02836","SJAG_04756","SJAG_00523","SJAG_05332","SJAG_00220","SJAG_03424","SJAG_02479","SJAG_01696","SJAG_02611","SJAG_03585","SJAG_02840","SJAG_07009","SJAG_03065","SJAG_00468","SJAG_05248","SJAG_01159","SJAG_03159","SJAG_06612","SJAG_03472","SJAG_03550","SJAG_00155","SJAG_04383","SJAG_02856","SJAG_01551","SJAG_01487","SJAG_02376","SJAG_02061","SJAG_03922","SJAG_02477","SJAG_01719","SJAG_00338","SJAG_02890","SJAG_02786","SJAG_01473","SJAG_01365","SJAG_02201","SJAG_01576","SJAG_03949","SJAG_05244","SJAG_01518","SJAG_03534","SJAG_03678","SJAG_01249","SJAG_03422","SJAG_04847","SJAG_02206","SJAG_00944","SJAG_04256","SJAG_04890","SJAG_00628","SJAG_16454","SJAG_02072","SJAG_03584","SJAG_02043","SJAG_04475","SJAG_02307","SJAG_03383","SJAG_00497","SJAG_07013","SJAG_01942","SJAG_04998","SJAG_01248","SJAG_03284","SJAG_00384","SJAG_02777","SJAG_06284","SJAG_04544","SJAG_01079","SJAG_01497","SJAG_00765","SJAG_00166","SJAG_02812","SJAG_02359","SJAG_01797","SJAG_00892","SJAG_01087","SJAG_03649","SJAG_02746","SJAG_02283","SJAG_00940","SJAG_00662","SJAG_04672","SJAG_01226","SJAG_00243","SJAG_03461","SJAG_02704","SJAG_04753","SJAG_00103","SJAG_03053","SJAG_00887","SJAG_04066","SJAG_01580","SJAG_00077","SJAG_00898","SJAG_02253","SJAG_04478","SJAG_02723","SJAG_04981","SJAG_00733","SJAG_04635","SJAG_00889","SJAG_03071","SJAG_04929","SJAG_00308","SJAG_02493","SJAG_03869","SJAG_00286","SJAG_04248","SJAG_02285","SJAG_00503","SJAG_04020","SJAG_03677","SJAG_03428","SJAG_01632","SJAG_03762","SJAG_02263","SJAG_00488","SJAG_01568","SJAG_01352","SJAG_03262","SJAG_01296","SJAG_01026","SJAG_04204","SJAG_02340","SJAG_03127","SJAG_03863","SJAG_04897","SJAG_03223","SJAG_02243","SJAG_05573","SJAG_02749","SJAG_00169","SJAG_00642","SJAG_03364","SJAG_00188","SJAG_00269","SJAG_01565","SJAG_01197","SJAG_02638","SJAG_04626","SJAG_00860","SJAG_03402","SJAG_02207","SJAG_02280","SJAG_02324","SJAG_02546","SJAG_03335","SJAG_01047","SJAG_00508","SJAG_00443","SJAG_04029","SJAG_04473","SJAG_04414","SJAG_04663","SJAG_01536","SJAG_03277","SJAG_04157","SJAG_01045","SJAG_00148","SJAG_00060","SJAG_02353","SJAG_03629","SJAG_02180","SJAG_04173","SJAG_00629","SJAG_04772","SJAG_03043","SJAG_01727","SJAG_04164","SJAG_04285","SJAG_02977","SJAG_01478","SJAG_02682","SJAG_02081","SJAG_01303","SJAG_02531","SJAG_03423","SJAG_03732","SJAG_02164","SJAG_04891","SJAG_06110","SJAG_03147","SJAG_01520","SJAG_04762","SJAG_00507","SJAG_04304","SJAG_02601","SJAG_00466","SJAG_01463","SJAG_04738","SJAG_02615","SJAG_03122","SJAG_03232","SJAG_05218","SJAG_01517","SJAG_03459","SJAG_04159","SJAG_03326","SJAG_04476","SJAG_01438","SJAG_02471","SJAG_03996","SJAG_02121","SJAG_02015","SJAG_02870","SJAG_01202","SJAG_02802","SJAG_02517","SJAG_05216","SJAG_02184","SJAG_00936","SJAG_05003","SJAG_00799","SJAG_02721","SJAG_00653","SJAG_03297","SJAG_01806","SJAG_02046","SJAG_01734","SJAG_03425","SJAG_05270","SJAG_02643","SJAG_05000","SJAG_04085","SJAG_02026","SJAG_02522","SJAG_00251","SJAG_02236","SJAG_02871","SJAG_00690","SJAG_01364","SJAG_04746","SJAG_01235","SJAG_03034","SJAG_01436","SJAG_03254","SJAG_02335","SJAG_02390","SJAG_05320","SJAG_02452","SJAG_02189","SJAG_04788","SJAG_01468","SJAG_03636","SJAG_04534","SJAG_07014","SJAG_02803","SJAG_01322","SJAG_01851","SJAG_01767","SJAG_04207","SJAG_04130","SJAG_01715","SJAG_03322","SJAG_00600","SJAG_02467","SJAG_00105","SJAG_03971","SJAG_00423","SJAG_04168","SJAG_04367","SJAG_02535","SJAG_00069","SJAG_01387","SJAG_04695","SJAG_04409","SJAG_00844","SJAG_01954","SJAG_00782","SJAG_02762"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63568,73183,103181],"is_not":false,"summary":null,"term":"GO:0006412"},{"annotations":[116430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[117196,107641,78569,75571,116042,114396,75371,120755,78429,102846,76531,119629,116546,77969,103500,75247,106055,63102,77008,79946,109189,117060,109889,92942,80020,73971,104414,104429,107890,94090,111530,107173,107334,107393,107392,98491,107648,71576,119630,119676,117197,105079,115447,116067,101981,109848,115508,78245,114651,71015,107515,109259,80935,115926,108058,81606,119437,111529,75006,92203,101724,105807,93257,119463,104428,78931,113111,116043,120320,98999,112728,107640,92916,79731,74529,99083,99124,95614,115927,95414,116218,116499,116500,97815,114203,115445,92915,102409,120321,103499,111976,113112,101725,96954,115113,118452,100586,98927,72077,114204,62250,107040,110354,103618,72819,104413,115446,116571,92941,78995,79193,96667,73802,92917,114395,119991,95415,119442,99364,71950,80124,116545,111286,101586,100587,108683,98266,97483,106628,101982,113413,98265,103617,93496,81920,101585,107649,95519,101095,109890,72070,115114,79133,79366,113412,73857,118912,106390,80181,112729,106056,116572,101096,91033,91483,99365,102386,116217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002181"},{"annotations":[121006,117741,111148,107369,69180,109871,118981,107061,118317,58360,118318,121005,120957,120523,116745,98629,120956,111147,97257,107525,67444,70653,100255,100256,107368,115883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002182"},{"annotations":[98586,105162,89383,107577,112608,100301,106719,91781,75684,102444,115991,105343,92240,109283,120560,105478,99149,78969,108990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002183"},{"annotations":[118049,60380,75610,111150,60794,96716,98406,111149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002184"},{"annotations":[73779,76937,60088,64663,98776,100856,60245,59395,63174,71326,70263,64901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[73152,80240,98000,120097,75225,79798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[76252,114300,97704],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990145"},{"annotations":[93464,114903,117700,109089,98818,108730,117437,104213,70843,120119,79908,110121,112378,113103,63196,114733,105953,67714,111833,77504,110064,73559,107673,114231,71380,71506,98929,106318,118286,108371,90900,93549,91811,60936,96384,95615,91358,105030,110159,110209,110570,118036,96379,99594,118177,100143,116613,103036,110060,95711,120447,76912,80417,91759,91838,93355,78149,77084,90221,97158,101023,105633,108005,110455,104565,112126,112660,114470,79853,81200,97261,111350,99913,93973,99912,112772,116730,104259,105885,98142,96088,98553,105279,116332,98521,117615,119424,99886,115463,119951,120080,72564,109921,119029,77161,58266,79076,103405,114369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032543"},{"annotations":[81762,81911,93881,75411],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070125"},{"annotations":[92881,100629,107552,103243,103857,80301,110324,75882,109251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070124"},{"annotations":[97413,104015,97850,100574],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070126"},{"annotations":[120267,116872,101368,97503],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000766"},{"annotations":[93198,114159],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[77014,117639,96264,111664,71694,101262],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[77129],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001125"},{"annotations":[108627,71533,119159],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000767"},{"annotations":[100630,114683],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070131"},{"annotations":[102398],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[67825,70304],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045901"},{"annotations":[74496],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045948"},{"annotations":[70305,78314,67826],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[98137,92147,104526,113165,114402,118847,107214,102656,102209,111700,119484,97994],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000765"},{"annotations":[111480,115987,97377,112145],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140018"},{"annotations":[105276,105911,97138],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[105047],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990983"},{"annotations":[75788],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[105080,78401,77130,79985,65367,107602,118110,71597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072344"},{"annotations":[101376],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0141014"},{"annotations":[75226,76938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002188"},{"annotations":[65676,62330],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006414"},{"annotations":[67829,70308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006452"},{"annotations":[73451],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006413"},{"annotations":[62707,79218],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006415"},{"annotations":[96572],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":393,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00060":null,"SJAG_00069":null,"SJAG_00077":null,"SJAG_00086":null,"SJAG_00103":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00169":null,"SJAG_00188":null,"SJAG_00220":null,"SJAG_00226":null,"SJAG_00243":null,"SJAG_00251":null,"SJAG_00269":null,"SJAG_00286":null,"SJAG_00308":null,"SJAG_00315":null,"SJAG_00338":null,"SJAG_00384":null,"SJAG_00420":null,"SJAG_00423":null,"SJAG_00443":null,"SJAG_00465":null,"SJAG_00466":null,"SJAG_00468":null,"SJAG_00488":null,"SJAG_00497":null,"SJAG_00503":null,"SJAG_00507":null,"SJAG_00508":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00537":null,"SJAG_00541":null,"SJAG_00544":null,"SJAG_00579":null,"SJAG_00600":null,"SJAG_00628":null,"SJAG_00629":null,"SJAG_00642":null,"SJAG_00653":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00726":null,"SJAG_00733":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00782":null,"SJAG_00786":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00887":null,"SJAG_00889":null,"SJAG_00892":null,"SJAG_00898":null,"SJAG_00912":null,"SJAG_00921":null,"SJAG_00936":null,"SJAG_00940":null,"SJAG_00944":null,"SJAG_01026":null,"SJAG_01045":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01074":null,"SJAG_01079":null,"SJAG_01087":null,"SJAG_01117":null,"SJAG_01128":null,"SJAG_01132":null,"SJAG_01159":null,"SJAG_01194":null,"SJAG_01197":null,"SJAG_01202":null,"SJAG_01226":null,"SJAG_01235":null,"SJAG_01248":null,"SJAG_01249":null,"SJAG_01259":null,"SJAG_01269":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01303":null,"SJAG_01322":null,"SJAG_01352":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01368":null,"SJAG_01387":null,"SJAG_01411":null,"SJAG_01413":null,"SJAG_01436":null,"SJAG_01438":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01487":null,"SJAG_01497":null,"SJAG_01512":null,"SJAG_01517":null,"SJAG_01518":null,"SJAG_01520":null,"SJAG_01522":null,"SJAG_01536":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01576":null,"SJAG_01577":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01591":null,"SJAG_01608":null,"SJAG_01609":null,"SJAG_01630":null,"SJAG_01632":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01676":null,"SJAG_01696":null,"SJAG_01715":null,"SJAG_01719":null,"SJAG_01721":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01797":null,"SJAG_01806":null,"SJAG_01829":null,"SJAG_01851":null,"SJAG_01853":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02015":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02046":null,"SJAG_02061":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02072":null,"SJAG_02081":null,"SJAG_02096":null,"SJAG_02121":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02184":null,"SJAG_02189":null,"SJAG_02201":null,"SJAG_02206":null,"SJAG_02207":null,"SJAG_02224":null,"SJAG_02236":null,"SJAG_02243":null,"SJAG_02253":null,"SJAG_02263":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02285":null,"SJAG_02292":null,"SJAG_02307":null,"SJAG_02312":null,"SJAG_02324":null,"SJAG_02331":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02353":null,"SJAG_02359":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02428":null,"SJAG_02452":null,"SJAG_02467":null,"SJAG_02471":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02493":null,"SJAG_02510":null,"SJAG_02517":null,"SJAG_02522":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02585":null,"SJAG_02592":null,"SJAG_02597":null,"SJAG_02601":null,"SJAG_02611":null,"SJAG_02615":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02643":null,"SJAG_02682":null,"SJAG_02704":null,"SJAG_02721":null,"SJAG_02723":null,"SJAG_02738":null,"SJAG_02746":null,"SJAG_02749":null,"SJAG_02755":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02786":null,"SJAG_02802":null,"SJAG_02803":null,"SJAG_02812":null,"SJAG_02836":null,"SJAG_02840":null,"SJAG_02856":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_02977":null,"SJAG_02995":null,"SJAG_03034":null,"SJAG_03040":null,"SJAG_03043":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03071":null,"SJAG_03094":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03147":null,"SJAG_03159":null,"SJAG_03176":null,"SJAG_03189":null,"SJAG_03192":null,"SJAG_03197":null,"SJAG_03223":null,"SJAG_03232":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03277":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03322":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03402":null,"SJAG_03422":null,"SJAG_03423":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03428":null,"SJAG_03433":null,"SJAG_03459":null,"SJAG_03461":null,"SJAG_03472":null,"SJAG_03501":null,"SJAG_03534":null,"SJAG_03545":null,"SJAG_03550":null,"SJAG_03568":null,"SJAG_03584":null,"SJAG_03585":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_03658":null,"SJAG_03666":null,"SJAG_03677":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03762":null,"SJAG_03788":null,"SJAG_03794":null,"SJAG_03859":null,"SJAG_03863":null,"SJAG_03869":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03949":null,"SJAG_03971":null,"SJAG_03996":null,"SJAG_04019":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04066":null,"SJAG_04085":null,"SJAG_04093":null,"SJAG_04130":null,"SJAG_04157":null,"SJAG_04159":null,"SJAG_04160":null,"SJAG_04164":null,"SJAG_04168":null,"SJAG_04173":null,"SJAG_04174":null,"SJAG_04176":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04248":null,"SJAG_04256":null,"SJAG_04281":null,"SJAG_04283":null,"SJAG_04285":null,"SJAG_04291":null,"SJAG_04304":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04351":null,"SJAG_04367":null,"SJAG_04378":null,"SJAG_04383":null,"SJAG_04409":null,"SJAG_04414":null,"SJAG_04452":null,"SJAG_04473":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04478":null,"SJAG_04482":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04534":null,"SJAG_04544":null,"SJAG_04626":null,"SJAG_04635":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04689":null,"SJAG_04695":null,"SJAG_04738":null,"SJAG_04744":null,"SJAG_04746":null,"SJAG_04753":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04772":null,"SJAG_04788":null,"SJAG_04814":null,"SJAG_04847":null,"SJAG_04856":null,"SJAG_04862":null,"SJAG_04873":null,"SJAG_04889":null,"SJAG_04890":null,"SJAG_04891":null,"SJAG_04893":null,"SJAG_04897":null,"SJAG_04900":null,"SJAG_04918":null,"SJAG_04929":null,"SJAG_04959":null,"SJAG_04981":null,"SJAG_04998":null,"SJAG_05000":null,"SJAG_05003":null,"SJAG_05008":null,"SJAG_05216":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05248":null,"SJAG_05265":null,"SJAG_05270":null,"SJAG_05271":null,"SJAG_05320":null,"SJAG_05332":null,"SJAG_05560":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_06284":null,"SJAG_06612":null,"SJAG_07009":null,"SJAG_07013":null,"SJAG_07014":null,"SJAG_16454":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0043037","Wikipedia:Translation_(genetics)","GO:0006416","GO:0006453","Reactome:R-HSA-72766"],"synonyms":[{"name":"protein anabolism","type":"exact"},{"name":"protein biosynthesis","type":"exact"},{"name":"protein biosynthetic process","type":"exact"},{"name":"protein formation","type":"exact"},{"name":"protein synthesis","type":"exact"},{"name":"protein translation","type":"exact"}],"termid":"GO:0006412","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002181":null,"GO:0002182":null,"GO:0002183":null,"GO:0002184":null,"GO:0002188":null,"GO:0006412":null,"GO:0006413":null,"GO:0006414":null,"GO:0006415":null,"GO:0006449":null,"GO:0006452":null,"GO:0032543":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070124":null,"GO:0070125":null,"GO:0070126":null,"GO:0070127":null,"GO:0070131":null,"GO:0070134":null,"GO:0072344":null,"GO:0140018":null,"GO:0140708":null,"GO:0141014":null,"GO:1904689":null,"GO:1990145":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null,"GO:2001125":null}}


id: PBO:0061098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 2","termid":"PBO:0061098"}


id: PBO:0048609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIMAP1-GIMAP5 readthrough","termid":"PBO:0048609"}


id: PBO:0069281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 537, pseudogene","termid":"PBO:0069281"}


id: GO:0141049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionylated protein (PSSG) + glutathione (GSH) = protein-thiol (PSH) + glutathione disulfide (GSSG). The reaction may proceed via a 'monothiol' or 'dithiol' mechanism.","definition_xrefs":["PMID:33932870","PMID:23397885","PMID:36771108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0015036","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"protein-glutathione oxidoreductase (glutathione) activity","synonyms":[{"name":"glutaredoxin activity","type":"broad"},{"name":"glutathione oxidoreductase activity","type":"broad"}],"termid":"GO:0141049"}


id: GO:0071284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lead ion","termid":"GO:0010288"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lead ion","termid":"GO:0071284"}


id: GO:1902977
data:
  {"annotated_genes":["SJAG_04995","SJAG_00327","SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73750,80057,57361],"is_not":false,"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_02607":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0006259","GO:0008150","GO:0065003","GO:0006260"],"is_obsolete":false,"name":"mitotic DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"DNA replication preinitiation complex formation involved in mitotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1902977","terms_by_termid":{"GO:1902977":null}}


id: GO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-light-chain = ADP + myosin-light-chain phosphate.","definition_xrefs":["EC:2.7.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0004672","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"myosin light chain kinase activity","secondary_identifiers":["MetaCyc:2.7.11.18-RXN","Reactome:R-HSA-445813","Reactome:R-HSA-5668978","RHEA:22004"],"synonyms":[{"name":"ATP:myosin-light-chain O-phosphotransferase","type":"broad"},{"name":"ATP:myosin-light-chain O-phosphotransferase activity","type":"related"},{"name":"MLCK","type":"related"},{"name":"MLCkase activity","type":"related"},{"name":"STK18","type":"related"},{"name":"calcium/calmodulin-dependent myosin light chain kinase activity","type":"related"},{"name":"myosin kinase activity","type":"related"},{"name":"myosin light chain protein kinase activity","type":"related"},{"name":"myosin light-chain kinase","type":"broad"},{"name":"myosin light-chain kinase (phosphorylating)","type":"related"},{"name":"myosin light-chain kinase (phosphorylating) activity","type":"related"},{"name":"myosin light-chain kinase activity","type":"related"},{"name":"myosin-light-chain kinase activity","type":"exact"},{"name":"smooth-muscle-myosin-light-chain kinase activity","type":"narrow"}],"termid":"GO:0004687"}


id: PBO:0041378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5","termid":"PBO:0041378"}


id: PBO:0047867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q31)","termid":"PBO:0047867"}


id: PBO:0067900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 202","termid":"PBO:0067900"}


id: PBO:0062511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 4 pseudogene","termid":"PBO:0062511"}


id: PBO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG1 antisense RNA 1","termid":"PBO:0045059"}


id: PBO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 4","termid":"PBO:0075174"}


id: GO:0103000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 4-hydroxylamino-2,6-dinitrotoluene = 4-hydroxylamino-2,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:4-hydroxylamino-2,6-dinitrotoluene-O-glucosyltransferase activity (obsolete GO:0103000)","termid":"GO:0103000"}


id: GO:2001257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of cation channel activity","synonyms":[{"name":"regulation of cation diffusion facilitator activity","type":"exact"},{"name":"regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001257"}


id: PBO:0062232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 12","termid":"PBO:0062232"}


id: PBO:0045478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin related protein 2","termid":"PBO:0045478"}


id: MONDO:0021063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the colon. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C9242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant colon neoplasm","secondary_identifiers":["MEDGEN:2839","DOID:219","ICD9:153","SCTID:363406005","ICD9:153.8","ICD9:153.9","UMLS:C0007102"],"synonyms":[{"name":"cancer of colon","type":"exact"},{"name":"colon cancer","type":"exact"},{"name":"colon neoplasm, malignant","type":"exact"},{"name":"colon tumor, malignant","type":"exact"},{"name":"malignant colon neoplasm","type":"exact"},{"name":"malignant colon tumor","type":"exact"},{"name":"malignant colon tumour","type":"exact"},{"name":"malignant colonic neoplasm","type":"exact"},{"name":"malignant colonic tumor","type":"exact"},{"name":"malignant colonic tumour","type":"exact"},{"name":"malignant neoplasm of colon","type":"exact"},{"name":"malignant neoplasm of the colon","type":"exact"},{"name":"malignant tumor of colon","type":"exact"},{"name":"malignant tumor of the colon","type":"exact"},{"name":"malignant tumour of colon","type":"exact"},{"name":"malignant tumour of the colon","type":"exact"}],"termid":"MONDO:0021063","xrefs":{"Monarch":{"xref_id":"0021063"}}}


id: PBO:0082493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic epsilon subunit of the translation initiation factor eIF2B; eIF2B is the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression; mutations in human ortholog cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082493"}


id: PBO:0059075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 1","termid":"PBO:0059075"}


id: PBO:0040041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor nuclear translocator","termid":"PBO:0040041"}


id: MONDO:1010503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, dog","secondary_identifiers":["OMIA:001803-9615"],"termid":"MONDO:1010503","xrefs":{"Monarch":{"xref_id":"1010503"}}}


id: MONDO:0054860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 110","secondary_identifiers":["DOID:0111644","OMIM:618094","MEDGEN:1648377","GARD:18150","UMLS:C4748162"],"synonyms":[{"name":"DFNB110","type":"narrow"},{"name":"deafness, autosomal recessive 110","type":"narrow"}],"termid":"MONDO:0054860","xrefs":{"Monarch":{"xref_id":"0054860"}}}


id: PBO:0038555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17B, depalmitoylase","termid":"PBO:0038555"}


id: _global:starts
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X starts Y if X is part of Y, and A and Y share a 5' or N-terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"_global:starts"}


id: PBO:0046461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophil peroxidase","termid":"PBO:0046461"}


id: PBO:0088241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S41","termid":"PBO:0088241"}


id: PBO:0069122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 371, pseudogene","termid":"PBO:0069122"}


id: MONDO:0014805
data:
  {"annotated_genes":["SJAG_03686","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87639,87638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","definition":"A rare genetic intellectual disability syndrome characterized by global developmental delay, intellectual disability, severe speech delay, behavioral abnormalities (including impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors), autism spectrum disorder and mild and variable dysmorphic facies (including deep-set eyes and a prominent nasal septum, extending below the alae nasi) due to point mutation of USP7 gene or 16p13.2 microdeletion where USP7 is completely or partially deleted. Behavioral abnormalities are more pronounced in microdeletion. Patients may also have hypotonia, feeding problems, delayed walking with unsteady gait, hypogonadism in males, seizures and ocular anomalies (such as myopia, estropia, strabismus, and nystagmus).","definition_xrefs":["Orphanet:643549"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719035","NORD:1917","UMLS:C5393908"],"synonyms":[{"name":"HAFOUS","type":"exact"},{"name":"USP7-Related Diseases","type":"exact"}],"termid":"MONDO:0014805","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0014805"}}}


id: PBO:0042720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle exit and neuronal differentiation 1 pseudogene 2","termid":"PBO:0042720"}


id: PBO:0045132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 2","termid":"PBO:0045132"}


id: GO:0007441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"}


id: PBO:0078286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 19-1","termid":"PBO:0078286"}


id: GO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the directed movement of substances within the cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host intracellular transport","synonyms":[{"name":"modulation by symbiont of host intracellular transport","type":"broad"},{"name":"modulation of host intracellular trafficking","type":"exact"}],"termid":"GO:0052038"}


id: MONDO:1012930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any respiratory distress syndrome that occurs in dogs due to a mutation in the ANLN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"respiratory distress syndrome, non-human animal","termid":"MONDO:1011923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial acute respiratory distress syndrome, ANLN-related, dog","secondary_identifiers":["OMIA:002539-9615"],"synonyms":[{"name":"ARDS","type":"exact"},{"name":"acute respiratory distress syndrome, dog","type":"related"},{"name":"respiratory distress syndrome, ANLN-related, dog","type":"exact"}],"termid":"MONDO:1012930","xrefs":{"Monarch":{"xref_id":"1012930"}}}


id: PBO:0067281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 362, pseudogene","termid":"PBO:0067281"}


id: GO:1900326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotriulose transport","termid":"GO:1900324"},{"relation_name":"positively_regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltotriulose transport","synonyms":[{"name":"activation of maltotriulose transport","type":"narrow"},{"name":"up regulation of maltotriulose transport","type":"exact"},{"name":"up-regulation of maltotriulose transport","type":"exact"},{"name":"upregulation of maltotriulose transport","type":"exact"}],"termid":"GO:1900326"}


id: PBO:0061865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OMA1 zinc metallopeptidase","termid":"PBO:0061865"}


id: MONDO:0700180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bronchioloalveolar lung carcinoma that occurs in a cat.","definition_xrefs":["NCIT:C134559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline bronchioloalveolar lung carcinoma","termid":"MONDO:0700180","xrefs":{"Monarch":{"xref_id":"0700180"}}}


id: MOD:00840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocyanate reagent derivatized residue","termid":"MOD:00840"}


id: MONDO:0021829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agnathia-microstomia-synotia","secondary_identifiers":["MEDGEN:419145","UMLS:C2931718","MESH:C538059"],"synonyms":[{"name":"Plurimalformative syndrome","type":"related"},{"name":"agnathia, microstomia, synotia and cardiac and pulmonary maldevelopment","type":"related"}],"termid":"MONDO:0021829","xrefs":{"Monarch":{"xref_id":"0021829"}}}


id: PBO:0077755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 7","termid":"PBO:0077755"}


id: MONDO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, X-linked 3","secondary_identifiers":["UMLS:C3888089","GARD:18095","DOID:0111736","OMIM:300030","MEDGEN:854758","MESH:C564727"],"synonyms":[{"name":"DFNX3","type":"narrow"},{"name":"deafness X-linked, DFN3","type":"narrow"},{"name":"deafness, X-linked 3","type":"narrow"},{"name":"deafness, X-linked 4, congenital sensorineural","type":"narrow"}],"termid":"MONDO:0010228","xrefs":{"Monarch":{"xref_id":"0010228"}}}


id: MONDO:0019678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A5 (BDA5) is a very rare congenital malformation of the digits characterized by absence of the middle phalanges (usually of digits 2 to 5), nail dysplasia and duplicated terminal phalanx of the thumb.","definition_xrefs":["Orphanet:93389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A5","secondary_identifiers":["MEDGEN:929661","GARD:982","MESH:C537091","OMIM:112900","UMLS:C4303992","SCTID:720570007","icd11.foundation:291957825"],"synonyms":[{"name":"absent middle phalanges of digits 2-5 with nail dysplasia","type":"related"},{"name":"brachydactyly type A5 nail dysplasia","type":"related"},{"name":"brachydactyly with absence of middle phalanges and hypoplastic nails","type":"related"}],"termid":"MONDO:0019678","xrefs":{"Monarch":{"xref_id":"0019678"}}}


id: GO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response seeking to protect an organism from an perceived external threat to that organism.","definition_xrefs":["GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral defense response","synonyms":[{"name":"behavioural defense response","type":"exact"}],"termid":"GO:0002209"}


id: PR:P31209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pabp gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylate-binding protein, cytoplasmic and nuclear (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.04c","synonyms":[{"name":"PABP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pabp","type":"exact"},{"name":"poly(A)-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polyadenylate tail-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31209"}


id: PBO:0049729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis A virus cellular receptor 1","termid":"PBO:0049729"}


id: MONDO:0019555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"localized lipodystrophy","termid":"MONDO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"panniculitis and localized lipodystrophy","secondary_identifiers":["MEDGEN:1678538","GARD:19128","Orphanet:90159","UMLS:C5190785"],"synonyms":[{"name":"panniculitis-induced localised lipodystrophy","type":"related"},{"name":"panniculitis-induced localized lipodystrophy","type":"related"}],"termid":"MONDO:0019555","xrefs":{"Monarch":{"xref_id":"0019555"}}}


id: GO:1900225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NLRP3 inflammasome complex assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"part_of","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"regulates","term_name":"NLRP3 inflammasome complex assembly","termid":"GO:0044546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of NLRP3 inflammasome complex assembly","synonyms":[{"name":"regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"regulation of NLRP3 inflammasome activation","type":"related"}],"termid":"GO:1900225"}


id: PBO:0028506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaerobic_cell_population_growth","termid":"PBO:0028506"}


id: PBO:0083535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF VRP1/YLR337C","termid":"PBO:0083535"}


id: PBO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, associated with clathrin coated vesicles (predicted)","termid":"PBO:0016538"}


id: FYPO:0001172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 7-methylguanosine cap hypermethylation","synonyms":[{"name":"abnormal 2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"abnormal 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"abnormal 7-methylguanosine cap hypermethylation during vegetative growth","type":"exact"},{"name":"abnormal TMG cap formation","type":"exact"},{"name":"abnormal conversion of m(7)G to m(3)G","type":"exact"},{"name":"abnormal snRNA capping","type":"narrow"},{"name":"abnormal snoRNA capping","type":"narrow"}],"termid":"FYPO:0001172"}


id: PBO:0083822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083822"}


id: PBO:0073820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 21, pseudogene","termid":"PBO:0073820"}


id: PATO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"To bent or hang downwards.","definition_xrefs":["thefreedictionary.:thefreedictionary."],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drooping","synonyms":[{"name":"sagging","type":"exact"}],"termid":"PATO:0002165"}


id: MONDO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic deficiency of any of the component of the complement system (including the classical, alternative, and terminal pathway components), that can either be acquired or inherited.","definition_xrefs":["MONDO:nv","PMID:20930072","PMID:16026838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement deficiency","secondary_identifiers":["DOID:626","NCIT:C4691","SCTID:24743004","UMLS:C0272242","Orphanet:459345","NANDO:1200364","MEDGEN:82898","NANDO:2200776","ICD9:279.8"],"synonyms":[{"name":"complement activation disease","type":"exact"},{"name":"complement deficiency","type":"exact"},{"name":"complement deficiency disease","type":"exact"},{"name":"disorder of complement activation","type":"exact"},{"name":"immunodeficiency due to a complement cascade component deficiency","type":"exact"}],"termid":"MONDO:0003832","xrefs":{"Monarch":{"xref_id":"0003832"}}}


id: PBO:0082103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase with protein-unfoldase activity; subunit of polyUb-selective segregase complex involved in ERAD, INM-associated degradation (INMAD), mitotic spindle disassembly, macroautophagy, PMN, ribosome-associated degradation, ribophagy, homotypic ER membrane fusion, SCF complex disassembly, cell wall integrity, and telomerase regulation; mobilizes membrane-anchored transcription factors by regulated Ub/proteasome-dependent processing (RUP); human ortholog VCP complements a cdc48 mutant","termid":"PBO:0082103"}


id: PR:O13615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pleiotropic regulator 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02867","PRO:DNx","PANTHER:PTHR19923:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.07","secondary_identifiers":["UniProtKB:O13615"],"synonyms":[{"name":"Spom972h-PLRG1","type":"exact"},{"name":"complexed with cdc5 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-processing protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13615"}


id: MONDO:0023089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical term that refers to the presence of a red flat and well defined lesion on the oral mucosa that is not caused by trauma, vascular, or inflammatory processes. It is a precancerous condition and is seen more commonly in middle aged or older males. It is associated with tobacco and alcohol consumption. Microscopic examination reveals severe epithelial dysplasia, carcinoma in situ, or invasive squamous cell carcinoma.","definition_xrefs":["NCIT:C3025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroplakia","secondary_identifiers":["UMLS:C0014818","MEDGEN:41862"],"synonyms":[{"name":"erythroplakia","type":"exact"}],"termid":"MONDO:0023089","xrefs":{"Monarch":{"xref_id":"0023089"}}}


id: PBO:0034120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-luminal_space_of","termid":"PBO:0034120"}


id: MOD:01681
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-aspartic acid residue with one methyl group.","definition_xrefs":["Unimod:34#D","OMSSA:16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated aspartic acid","termid":"MOD:00887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-aspartic acid","synonyms":[{"name":"Me1Asp","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methyld","type":"exact"}],"termid":"MOD:01681"}


id: GO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells that contributes to the reorganization of tissue resulting in the maturation of the atrial ventricular junction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"},{"relation_name":"part_of","term_name":"atrial ventricular junction remodeling","termid":"GO:0003294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in atrial ventricular junction remodeling","synonyms":[{"name":"cell proliferation involved in atrial ventricular junction remodelling","type":"exact"},{"name":"cell proliferation involved in atrio-ventricular junction remodeling","type":"exact"},{"name":"cell proliferation involved in atrio-ventricular junction remodelling","type":"exact"},{"name":"cell proliferation involved in atrioventricular junction remodeling","type":"exact"},{"name":"cell proliferation involved in atrioventricular junction remodelling","type":"exact"}],"termid":"GO:0003295"}


id: PBO:0038664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 2","termid":"PBO:0038664"}


id: PBO:0031292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype","termid":"PBO:0031292"}


id: MONDO:0015843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine hypoplasia","secondary_identifiers":["MEDGEN:120575","UMLS:C0266399","GARD:20184","icd11.foundation:1858530341","MedDRA:10063146","Orphanet:180139"],"termid":"MONDO:0015843","xrefs":{"Monarch":{"xref_id":"0015843"}}}


id: GO:1902059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["PMID:23480775","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"negatively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"down regulation of ascus development","type":"narrow"},{"name":"down regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"down regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"down regulation of perfect stage fruiting body development","type":"narrow"},{"name":"down regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"down-regulation of ascus development","type":"narrow"},{"name":"down-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"down-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"down-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"down-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"downregulation of ascus development","type":"narrow"},{"name":"downregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"downregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"downregulation of perfect stage fruiting body development","type":"narrow"},{"name":"downregulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"inhibition of ascus development","type":"narrow"},{"name":"inhibition of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"inhibition of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"inhibition of perfect stage fruiting body development","type":"narrow"},{"name":"inhibition of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"negative regulation of ascus development","type":"narrow"},{"name":"negative regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"negative regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"negative regulation of perfect stage fruiting body development","type":"narrow"}],"termid":"GO:1902059"}


id: GO:0032661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["PMID:23710316","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-18 production","secondary_identifiers":["GO:0045381","GO:0150120"],"synonyms":[{"name":"regulation of IL-18 production","type":"exact"},{"name":"regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032661"}


id: PBO:0086938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase; Myo2p-binding protein implicated in mother-to-bud transport of cortical endoplasmic reticulum (ER), late Golgi, and mitochondria during cell division; function is regulated at multiple levels; abundance of active Ypt11p forms is controlled by phosphorylation status and degradation; normally a low-abundance protein whose ER localization is only detected when protein is highly over expressed","termid":"PBO:0086938"}


id: MONDO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the ampulla of Vater. Morphologically, it is characterized by the presence of mucin-containing signet-ring cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct signet ring cell carcinoma","termid":"MONDO:0002664"},{"relation_name":"is_a","term_name":"ampulla of vater adenocarcinoma","termid":"MONDO:0002670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"ampullary signet ring cell adenocarcinoma","secondary_identifiers":["DOID:3501","NCIT:C6656","MEDGEN:231057","UMLS:C1332249"],"synonyms":[{"name":"ampulla of Vater signet Ring cell carcinoma","type":"exact"},{"name":"ampullary signet Ring cell carcinoma","type":"exact"},{"name":"ampullary signet ring cell carcinoma","type":"exact"}],"termid":"MONDO:0002669","xrefs":{"Monarch":{"xref_id":"0002669"}}}


id: PBO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin, GTPase activator Tsc2","termid":"PBO:0036236"}


id: MONDO:0013355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital dyserythropoietic anemia type IV (CDA IV) is a newly discovered form of CDA characterized by ineffective erythropoiesis and hemolysis that leads to severe anemia at birth.","definition_xrefs":["Orphanet:293825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anemia","termid":"MONDO:0000577"},{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia type 4","secondary_identifiers":["DOID:0111400","OMIM:613673","SCTID:719453009","GARD:17344","UMLS:C3150926","MEDGEN:462276"],"synonyms":[{"name":"CDA IV","type":"exact"},{"name":"CDA due to KLF1 mutation","type":"exact"},{"name":"CDA type 4","type":"exact"},{"name":"CDA type IV","type":"exact"},{"name":"CDA, type 4","type":"related"},{"name":"CDAN4","type":"exact"},{"name":"anemia, congenital dyserythropoietic, type 4","type":"related"},{"name":"anemia, congenital dyserythropoietic, type IV","type":"related"},{"name":"congenital dyserythropoietic anaemia due to KLF1 mutation","type":"exact"},{"name":"congenital dyserythropoietic anemia due to KLF1 mutation","type":"exact"},{"name":"congenital dyserythropoietic anemia type 4","type":"exact"},{"name":"dyserythropoietic anemia, congenital, type IV","type":"exact"}],"termid":"MONDO:0013355","xrefs":{"Monarch":{"xref_id":"0013355"}}}


id: PBO:0113530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation; relative distribution to vacuole decreases upon DNA replication stress; targeted to vacuole via AP-3 pathway","termid":"PBO:0113530"}


id: MONDO:1011502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi syndrome that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi syndrome, non-human animal","termid":"MONDO:1011448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi syndrome, cattle","secondary_identifiers":["OMIA:000366-9913"],"termid":"MONDO:1011502","xrefs":{"Monarch":{"xref_id":"1011502"}}}


id: PR:Q10367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo3 gene.","definition_xrefs":["UniProtKB:Q10367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase-activating protein glo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.17c","synonyms":[{"name":"ARF GAP glo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo3","type":"exact"}],"termid":"PR:Q10367"}


id: GO:0005627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A sac-like fruiting body (ascomycete Fungi); contains ascospores (typically eight in number).","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete ascus (obsolete GO:0005627)","synonyms":[{"name":"ascus","type":"exact"}],"termid":"GO:0005627"}


id: GO:0071313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to caffeine","termid":"GO:0031000"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to caffeine","termid":"GO:0071313"}


id: MONDO:0006017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete western equine encephalitis (obsolete MONDO:0006017)","termid":"MONDO:0006017","xrefs":{"Monarch":{"xref_id":"0006017"}}}


id: PBO:0084412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication","termid":"PBO:0084412"}


id: SO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant where the mutated gene product adversely affects the other (wild type) gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominant_negative_variant","synonyms":[{"name":"dominant negative","type":"exact"},{"name":"dominant negative variant","type":"exact"}],"termid":"SO:0002052"}


id: PBO:0083381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex","termid":"PBO:0083381"}


id: MONDO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatic heart disease (obsolete MONDO:0000472)","termid":"MONDO:0000472","xrefs":{"Monarch":{"xref_id":"0000472"}}}


id: PR:Q9P3V6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.04 gene.","definition_xrefs":["UniProtKB:Q9P3V6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1348.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.04","synonyms":[{"name":"Spom972h-SPBC1348.04","type":"exact"}],"termid":"PR:Q9P3V6"}


id: PBO:0066889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 189","termid":"PBO:0066889"}


id: GO:1904011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["PMID:18602130","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Aroclor 1254","termid":"GO:1904010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Aroclor 1254","termid":"GO:1904011"}


id: FYPO:0002093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion","synonyms":[{"name":"decreased sister chromatid cohesion during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0002093"}


id: PBO:0064153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKP4 antisense RNA 1","termid":"PBO:0064153"}


id: MOD:01081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-glycosyloxy- (of lysine) or beta-glycosyloxy- (of phenylalanine or tyrosine)","termid":"MOD:01081"}


id: MONDO:0018784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pediatric multiple sclerosis (MS) is a rare multiple sclerosis variant characterized by the onset of multiple sclerosis (i.e. one or multiple episodes of clinical CNS symptoms consistent with acquired CNS demyelination, with radiologically proven dissemination of inflammatory lesions in space and time, following exclusion of other disorders) before the age of 18 years old. Pediatric MS patients present a predominantly relapsing-remitting course with first attack usually consisting of optic neuritis, transverse myelitis, acute disseminated encephalomyelitis and monofocal or polyfocal neurological deficits. A high burden of T2-hyperintense lesions on initial MRI, primarily of the supratentorial region and/or of the cervical spinal cord, has been reported.","definition_xrefs":["Orphanet:477738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis","termid":"MONDO:0005301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"pediatric multiple sclerosis","secondary_identifiers":["UMLS:C5568571","GARD:10443","MEDGEN:1799994"],"synonyms":[{"name":"MS paediatric","type":"related"},{"name":"MS pediatric","type":"related"},{"name":"multiple sclerosis, paediatric","type":"related"},{"name":"multiple sclerosis, pediatric","type":"related"},{"name":"paediatric MS","type":"related"},{"name":"pediatric MS","type":"related"}],"termid":"MONDO:0018784","xrefs":{"Monarch":{"xref_id":"0018784"}}}


id: PBO:0063514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 2","termid":"PBO:0063514"}


id: PBO:0066577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 1","termid":"PBO:0066577"}


id: PBO:0078904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 13-1","termid":"PBO:0078904"}


id: GO:0036074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification in which bone formation occurs as result of the direct transformation of non-bone cells into bone cells without cell division.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaplastic ossification","synonyms":[{"name":"metaplasia","type":"related"}],"termid":"GO:0036074"}


id: GO:1905588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any plant-type cell wall modification that is involved in stomatal movement.","definition_xrefs":["PMID:27720618","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall modification involved in stomatal movement","synonyms":[{"name":"cellulose and pectin-containing cell wall modification involved in stomatal movement","type":"exact"}],"termid":"GO:1905588"}


id: PBO:0012535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_acquisition_of_features_of","termid":"PBO:0012535"}


id: GO:0003883
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76857],"is_not":false,"summary":null,"term":"GO:0003883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UTP + glutamine + H20= ADP + phosphate + CTP + glutamate.","definition_xrefs":["PMID:12354108","RHEA:26426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"CTP synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:CTPSYN-RXN","EC:6.3.4.2","Reactome:R-HSA-504054","Reactome:R-HSA-73647"],"synonyms":[{"name":"CTP synthetase activity","type":"related"},{"name":"UTP--ammonia ligase activity","type":"related"},{"name":"UTP:ammonia ligase (ADP-forming)","type":"related"},{"name":"cytidine 5'-triphosphate synthetase activity","type":"related"},{"name":"cytidine triphosphate synthetase activity","type":"related"},{"name":"uridine triphosphate aminase activity","type":"related"}],"termid":"GO:0003883","terms_by_termid":{"GO:0003883":null}}


id: GO:0047735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose + acceptor = cellobiono-1,5-lactone + reduced acceptor.","definition_xrefs":["MetaCyc:CELLOBIOSE-DEHYDROGENASE-ACCEPTOR-RXN","EC:1.1.99.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cellobiose dehydrogenase (acceptor) activity","secondary_identifiers":["RHEA:23484","GO:0047737"],"synonyms":[{"name":"CBOR activity","type":"related"},{"name":"CDH activity","type":"related"},{"name":"cellobiose dehydrogenase (quinone) activity","type":"narrow"},{"name":"cellobiose dehydrogenase activity","type":"related"},{"name":"cellobiose oxidase activity","type":"related"},{"name":"cellobiose oxidoreductase activity","type":"related"},{"name":"cellobiose-quinone oxidoreductase activity","type":"narrow"},{"name":"cellobiose:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"cellobiose:acceptor 1-oxidoreductase activity","type":"related"},{"name":"cellobiose:oxygen 1-oxidoreductase activity","type":"related"},{"name":"phanerochaete chrysosporium cellobiose oxidoreductase activity","type":"related"}],"termid":"GO:0047735"}


id: MONDO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by an Orthopoxvirus, which is transmitted by primates or rodents, and which is characterized by a prodromal syndrome of fever, chills, headache, myalgia, and lymphedema; initial symptoms are followed by a generalized papular rash that typically progresses from vesiculation through crusting over the course of two weeks.","definition_xrefs":["NCIT:C128421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monkeypox","secondary_identifiers":["ICD10CM:B04","MEDGEN:124442","ICD9:136.8","ICD9:059.01","SCTID:359814004","UMLS:C0276180","DOID:3292","MESH:D045908"],"synonyms":[{"name":"Monkeypox virus infection","type":"exact"},{"name":"infections, Monkeypox virus","type":"related"}],"termid":"MONDO:0002594","xrefs":{"Monarch":{"xref_id":"0002594"}}}


id: FYPO:0003743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002060","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth during glucose starvation","synonyms":[{"name":"decreased cell population growth during glucose depletion","type":"exact"},{"name":"decreased cell population growth during glucose deprivation","type":"exact"},{"name":"decreased cell population growth during glucose limitation","type":"related"},{"name":"decreased cell population growth in response to glucose starvation","type":"exact"},{"name":"hypersensitive to glucose starvation","type":"related"},{"name":"reduced cell population growth during glucose starvation","type":"related"},{"name":"sensitive to glucose starvation","type":"related"},{"name":"slow cell population growth during glucose starvation","type":"narrow"}],"termid":"FYPO:0003743"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0087338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of specific cargo proteins at the multivesicular body; mRNA is targeted to the bud via the mRNA transport system involving She2p","termid":"PBO:0087338"}


id: PBO:0065975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like 2","termid":"PBO:0065975"}


id: PBO:0041643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 I","termid":"PBO:0041643"}


id: GO:0102141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + [chondroitin-sulfate]-beta-D-glucuronate = adenosine 3',5'-bismonophosphate + [chondroitin-sulfate]-2-O-sulfo-beta-D-glucuronate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete [chondroitin sulfate]-D-glucuronyl 2-O-sulfotransferase activity (obsolete GO:0102141)","termid":"GO:0102141"}


id: GO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"acrosomal membrane","termid":"GO:0002080"}


id: PBO:0111912
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0111912"}


id: PBO:0056280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 2","termid":"PBO:0056280"}


id: PBO:0091271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L49","termid":"PBO:0091271"}


id: MONDO:0003822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary neoplasm of the urinary bladder in which the transitional cells form papillae. The papillary structures exhibit minimal architectural distortion and minimal atypia. Mitoses are infrequent. Patients are at an increased risk of developing new papillary lesions. Occasionally, the new lesions are urothelial carcinomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder papillary urothelial neoplasm","termid":"MONDO:0003442"},{"relation_name":"is_a","term_name":"urinary tract non-invasive transitional cell neoplasm","termid":"MONDO:0003755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-invasive bladder papillary urothelial neoplasm","secondary_identifiers":["UMLS:C1518358","DOID:6239","MEDGEN:309424","NCIT:C39831"],"synonyms":[{"name":"bladder PUNLMP","type":"exact"},{"name":"bladder papillary neoplasm of low malignant potential","type":"exact"},{"name":"non-invasive bladder papillary urothelial neoplasm","type":"exact"},{"name":"papillary urothelial neoplasm of low malignant potential","type":"exact"}],"termid":"MONDO:0003822","xrefs":{"Monarch":{"xref_id":"0003822"}}}


id: GO:0102419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: omega-hydroxy-C22:0-CoA + sn-glycerol 3-phosphate = coenzyme A + 2-omega-hydroxy-C22:0-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate omega-OH-C22:0-CoA acyl transferase activity (obsolete GO:0102419)","termid":"GO:0102419"}


id: PBO:0113200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p; apo-Map1p is activated by the GTP-dependent zinc transferase Zng1p, especially during zinc starvation; interacts with Zng1p via an N-terminal Zn finger domain","termid":"PBO:0113200"}


id: PBO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 34 pseudogene","termid":"PBO:0070120"}


id: GO:0160221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of Rho activity. Rho is a family of small (~21 kDa) signaling G proteins that include RhoA, Cdc42, and Rac1.","definition_xrefs":["PMID:33849392","PMID:10836144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rho-activating G protein-coupled receptor signaling pathway","termid":"GO:0160221"}


id: SO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of one or more sequences of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_collection","synonyms":[{"name":"variant collection","type":"related"}],"termid":"SO:0001507"}


id: PBO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4-like nonhomologous end joining factor, Cernunnon Xlf1/Nej1","termid":"PBO:0018151"}


id: PBO:0077906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosylprotein sulfotransferase 2","termid":"PBO:0077906"}


id: PBO:0067611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 783, pseudogene","termid":"PBO:0067611"}


id: PBO:0071049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 51","termid":"PBO:0071049"}


id: GO:0052708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolism","type":"exact"},{"name":"hercynine metabolic process","type":"exact"},{"name":"hercynine metabolism","type":"exact"},{"name":"histidine betaine metabolic process","type":"exact"},{"name":"histidine betaine metabolism","type":"exact"}],"termid":"GO:0052708"}


id: PATO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monoploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoploid","termid":"PATO:0001376"}


id: GO:0018738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-formylglutathione + H2O = formate + glutathione + H+.","definition_xrefs":["RHEA:14961","EC:3.1.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"S-formylglutathione hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0241","MetaCyc:S-FORMYLGLUTATHIONE-HYDROLASE-RXN","Reactome:R-HSA-5693724","KEGG_REACTION:R00527"],"termid":"GO:0018738"}


id: PBO:0033786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033786"}


id: GO:0044027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide associated with the transcription start site of genes.","definition_xrefs":["Wikipedia:Cpg_island","PMID:11898023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression, epigenetic","termid":"GO:0045814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene expression via chromosomal CpG island methylation","synonyms":[{"name":"DNA hypermethylation of CG island","type":"related"},{"name":"DNA hypermethylation of CpG island","type":"exact"},{"name":"epigenetic regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"hypermethylation of CpG island","type":"exact"},{"name":"maintenance of DNA methylation","type":"broad"},{"name":"negative regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"negative regulation of gene expression via CpG island methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CG dinucleotide methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CpG dinucleotide methylation","type":"exact"},{"name":"negative regulation of gene expression via chromosomal DNA cytosine methylation","type":"exact"}],"termid":"GO:0044027"}


id: GO:0034845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-methyl-succinyl-CoA = naphthyl-2-methylene-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1258"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-methyl-succinyl-CoA dehydrogenase activity (obsolete GO:0034845)","termid":"GO:0034845"}


id: PBO:0053068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"layilin","termid":"PBO:0053068"}


id: GO:0102955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-demethylmenaquinol-7 + S-adenosyl-L-methionine = menaquinol-7 + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:9045837","PMID:1444716","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity (obsolete GO:0102955)","termid":"GO:0102955"}


id: PBO:0054823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2236","termid":"PBO:0054823"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: GO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["ISBN:0198506732","PMID:15337120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ether lipid metabolic process","secondary_identifiers":["Wikipedia:Ether_lipid"],"synonyms":[{"name":"ether lipid metabolism","type":"exact"},{"name":"plasmalogen metabolic process","type":"narrow"}],"termid":"GO:0046485"}


id: GO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"}


id: GO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + UDP-D-glucose = a flavanone 7-O-beta-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.185","MetaCyc:2.4.1.185-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavanone 7-O-beta-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hesperetin 7-O-glucosyl-transferase activity","type":"related"},{"name":"naringenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavanone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047243"}


id: PBO:0056088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ly1 antibody reactive","termid":"PBO:0056088"}


id: MONDO:0008319
data:
  {"annotated_genes":["SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86986],"is_not":false,"summary":null,"term":"MONDO:0008319"}]},"cv_name":"mondo","definition":"Erythropoietic protoporphyria caused by a compound heterozygous or homozygous mutation in the gene encoding ferrochelatase (FECH) on chromosome 18q21.","definition_xrefs":["OMIM:177000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal erythropoietic protoporphyria","termid":"MONDO:0019263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004335","MONDO:0019142","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"protoporphyria, erythropoietic, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1643471","NANDO:2201266","NCIT:C84698","NANDO:1200815","UMLS:C4692546"],"synonyms":[{"name":"EPP","type":"related"},{"name":"EPP1","type":"exact"},{"name":"erythrohepatic protoporphyria","type":"related"},{"name":"erythropoietic protoporphyria","type":"broad"},{"name":"ferrochelatase deficiency","type":"exact"},{"name":"heme synthetase deficiency","type":"exact"},{"name":"protoporphyria, erythropoietic","type":"broad"},{"name":"protoporphyria, erythropoietic, 1","type":"exact"}],"termid":"MONDO:0008319","terms_by_termid":{"MONDO:0008319":null},"xrefs":{"Monarch":{"xref_id":"0008319"}}}


id: GO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-3-phospho-1-thio-D-glycerate + H2O = S-methyl-1-thio-D-glycerate + phosphate.","definition_xrefs":["RHEA:16081","EC:3.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"methylphosphothioglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04317","MetaCyc:3.1.3.14-RXN"],"synonyms":[{"name":"S-methyl-3-phospho-1-thio-D-glycerate phosphohydrolase activity","type":"related"},{"name":"methylthiophosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047382"}


id: PR:P24487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.14","secondary_identifiers":["UniProtKB:P24487"],"synonyms":[{"name":"Spom972h-ATP5A1","type":"exact"}],"termid":"PR:P24487"}


id: FYPO:0005370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which occurrence of errors, usually small deletions, upon repair of double-strand breaks in DNA by nonhomologous end joining is increased.","definition_xrefs":["PMID:11226171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair via nonhomologous end joining","termid":"FYPO:0003661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased fidelity of double-strand break repair via nonhomologous end joining","termid":"FYPO:0005370"}


id: GO:0062143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-propargylglycine (Pra). L-propargylglycine is an antibiotic produced by Streptomyces bacteria.","definition_xrefs":["PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound biosynthetic process","termid":"GO:0120237"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-propargylglycine biosynthetic process","termid":"GO:0062143"}


id: PBO:0016581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase gamma","termid":"PBO:0016581"}


id: PBO:0074420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 19","termid":"PBO:0074420"}


id: PBO:0014309
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae MET22","termid":"PBO:0014309"}


id: GO:0098700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The active transport of neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action of proton pumps.","definition_xrefs":["GOC:bf","GOC:pad","GOC:PARL","PMID:15217342","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter loading into synaptic vesicle","synonyms":[{"name":"neurotransmitter import into synaptic vesicle","type":"exact"},{"name":"neurotransmitter uptake into synaptic vesicle","type":"exact"},{"name":"synaptic vesicle neurotransmitter loading","type":"exact"}],"termid":"GO:0098700"}


id: PBO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst1","termid":"PBO:0005608"}


id: GO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway in which the MyD88 adaptor molecule mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:12855817","GOC:add","PMID:15728447","PMID:15585605","PMID:12524386","PMID:12467241","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166058","Reactome:R-HSA-975871"],"synonyms":[{"name":"MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002755"}


id: GO:0032337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin secretion","termid":"GO:0032335"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"positively_regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of activin secretion","synonyms":[{"name":"activation of activin secretion","type":"narrow"},{"name":"stimulation of activin secretion","type":"narrow"},{"name":"up regulation of activin secretion","type":"exact"},{"name":"up-regulation of activin secretion","type":"exact"},{"name":"upregulation of activin secretion","type":"exact"}],"termid":"GO:0032337"}


id: PR:G2TRR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.10","synonyms":[{"name":"Spom972h-SPBPB21E7.10","type":"exact"}],"termid":"PR:G2TRR8"}


id: GO:0060499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor-type receptor binding to one of its physiological ligands resulting in the formation of the lung bud along the lateral-esophageal sulcus.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in lung induction (obsolete GO:0060499)","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in lung induction","type":"exact"}],"termid":"GO:0060499"}


id: GO:0016252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any function that supports transcription of genes by RNA polymerase II, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nonspecific RNA polymerase II transcription factor activity (obsolete GO:0016252)","synonyms":[{"name":"nonspecific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0016252"}


id: GO:0035667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 4 receptor where the TRIF adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18641322","GOC:BHF","PMID:20511708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRIF-dependent toll-like receptor signaling pathway","termid":"GO:0035666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRIF-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRIF-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRIF-dependent toll-like receptor 4 signalling pathway","type":"exact"},{"name":"Toll/IL-1 receptor (TIR) domain-containing adaptor-dependent TLR4 signaling pathway","type":"exact"}],"termid":"GO:0035667"}


id: MONDO:0011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 5","secondary_identifiers":["OMIM:606053","MEDGEN:340048","UMLS:C1853755"],"synonyms":[{"name":"AUTS5","type":"exact"},{"name":"autism, susceptibility to, 5","type":"exact"},{"name":"autism-related speech delay","type":"related"},{"name":"intellectual developmental disorder with autism and speech delay","type":"exact"},{"name":"phrase speech delay, autism-related","type":"related"}],"termid":"MONDO:0011627","xrefs":{"Monarch":{"xref_id":"0011627"}}}


id: PBO:0084241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of the Anaphase-Promoting Complex/Cyclosome (APC/C); binds to APC/C and inhibits the activity of both APC/C(Cdc20) and APC/C(Cdh1); inhibits the binding of Cdc20 and Cdh1 to APC/C; overexpression results in increased sensitivity to microtubule poison; originally identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; functional homolog of human MAD2L1BP (p31comet)","termid":"PBO:0084241"}


id: GO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a sweet taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of sweet taste","synonyms":[{"name":"perception of sweet taste, detection of chemical stimulus","type":"exact"},{"name":"perception of sweet taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of sweet taste","type":"exact"},{"name":"sensory detection of sweet taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of sweet taste","type":"exact"},{"name":"sensory transduction of sweet taste","type":"exact"},{"name":"sweet taste detection","type":"exact"}],"termid":"GO:0001582"}


id: PR:O59731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C3E7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.11c","synonyms":[{"name":"Spom972h-SPBC3E7.11c","type":"exact"}],"termid":"PR:O59731"}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: PBO:0026941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiotic_interphase","termid":"PBO:0026941"}


id: PBO:0069561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 833, pseudogene","termid":"PBO:0069561"}


id: PR:O42832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent rRNA methyltransferase spb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.11","secondary_identifiers":["UniProtKB:O42832"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-methionine-dependent methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ3","type":"exact"}],"termid":"PR:O42832"}


id: PBO:0064650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA1 pseudogene 1","termid":"PBO:0064650"}


id: MONDO:0015585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptogenic late-onset epileptic spasms is a rare epilepsy syndrome characterized by late-onset (after 1 year old) epileptic spasms that occur in clusters, associated with tonic seizures, atypical absences and cognitive deterioration. Language difficulties and behavior problems are frequently present. EEG is characterized by a temporal, or temporofrontal, slow wave or spike focus combined with synchronous spike-waves and no hypsarrhythmia or background activity.","definition_xrefs":["Orphanet:163708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"cryptogenic late-onset epileptic spasms","secondary_identifiers":["icd11.foundation:457378168","MEDGEN:1666207","GARD:20050","UMLS:C4755310"],"synonyms":[{"name":"late-onset infantile spasms","type":"exact"}],"termid":"MONDO:0015585","xrefs":{"Monarch":{"xref_id":"0015585"}}}


id: SO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000310 predicted_ab_initio_computation (obsolete SO:0000310)","termid":"SO:0000310"}


id: FYPO:0002598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H2A phosphorylation","type":"exact"}],"termid":"FYPO:0002598"}


id: MONDO:0021088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III meningioma characterized by the predominance of a perivascular pseudopapillary pattern.","definition_xrefs":["NCIT:C3904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary meningioma","secondary_identifiers":["UMLS:C3163622","MEDGEN:463642","ONCOTREE:PPM","ICDO:9538/3"],"synonyms":[{"name":"papillary meningioma","type":"exact"}],"termid":"MONDO:0021088","xrefs":{"Monarch":{"xref_id":"0021088"}}}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: PBO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenylyl_cyclase_activity","termid":"PBO:0030056"}


id: MONDO:0018964
data:
  {"annotated_genes":["SJAG_04042","SJAG_04459","SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87083,87082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"}]},"cv_name":"mondo","definition":"Homocystinuria without methylmalonic aciduria is an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, encephalopathy and, sometimes, developmental delay, and associated with homocystinuria and hyperhomocysteinemia. There are three types of homocystinuria without methylmalonic aciduria; cblE, cblG and cblD-variant 1 (cblDv1).","definition_xrefs":["Orphanet:622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002280","MONDO:0004736","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"homocystinuria without methylmalonic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:236270","SCTID:721225009","UMLS:C4303479","GARD:16537","MEDGEN:929148","icd11.foundation:726186034"],"synonyms":[{"name":"functional methionine synthase deficiency","type":"exact"},{"name":"homocystinuria without methylmalonic aciduria","type":"exact"},{"name":"methylcobalamin deficiency","type":"exact"}],"termid":"MONDO:0018964","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null},"xrefs":{"Monarch":{"xref_id":"0018964"}}}


id: MOD:01861
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the amido nitrogen of the following residue to form an isothiazolidinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"}


id: MONDO:0038261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic neurological channelopathy of the central nervous system (obsolete MONDO:0038261)","secondary_identifiers":["Orphanet:98743"],"termid":"MONDO:0038261","xrefs":{"Monarch":{"xref_id":"0038261"}}}


id: GO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: MONDO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the ulnar nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"ulnar neuropathy","termid":"MONDO:0007006"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar nerve lesion","secondary_identifiers":["DOID:12168","ICD9:354.2","SCTID:367475009","UMLS:C1288279","MEDGEN:710723"],"synonyms":[{"name":"lesion of ulnar nerve","type":"exact"},{"name":"peripheral nerve lesion of ulnar nerve","type":"exact"},{"name":"ulnar nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0001458","xrefs":{"Monarch":{"xref_id":"0001458"}}}


id: SO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of the primary transcript that is clipped off during processing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clip","termid":"SO:0000303"}


id: GO:1902661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24277933","GOC:di","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"positively_regulates","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucose mediated signaling pathway","synonyms":[{"name":"activation of glucose mediated signaling pathway","type":"narrow"},{"name":"activation of glucose mediated signalling","type":"narrow"},{"name":"positive regulation of glucose mediated signalling","type":"exact"},{"name":"up regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up regulation of glucose mediated signalling","type":"exact"},{"name":"up-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucose mediated signalling","type":"exact"},{"name":"upregulation of glucose mediated signaling pathway","type":"exact"},{"name":"upregulation of glucose mediated signalling","type":"exact"}],"termid":"GO:1902661"}


id: GO:0102966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: icosanoyl-CoA + dodecan-1-ol = arachidoyl dodecanoate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete arachidoyl-CoA:1-dodecanol O-acyltransferase activity (obsolete GO:0102966)","termid":"GO:0102966"}


id: PBO:0067789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 91","termid":"PBO:0067789"}


id: PBO:0079205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR3 ribosome maturation factor","termid":"PBO:0079205"}


id: GO:0034238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a macrophage to one or more other cells to form a multinucleated cell.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage fusion","termid":"GO:0034238"}


id: PBO:0108682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_or_chimera","termid":"PBO:0108682"}


id: MONDO:0044246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Voluntary nystagmus is a rapid to-and-fro synchronous movement of the eyes that is initiated and maintained by conscious effort. Voluntary nystagmus has a frequency of 10-25 Hz, with an amplitude of up to 6 degrees, and can be maintained for up to 35 seconds. It usually has its first appearance between ages 8 to 15 years. It can be produced in both light and darkness, without fixation, at all eye positions, and even with closed eyes. It is accompanied by oscillopsia with visual blurring (summary by {1:Aschoff et al., 1976}).","definition_xrefs":["OMIM:164170"],"gene_count":0,"genotype_count":0,"name":"obsolete nystagmus, voluntary (obsolete MONDO:0044246)","synonyms":[{"name":"NYSTAGMUS, voluntary","type":"related"}],"termid":"MONDO:0044246","xrefs":{"Monarch":{"xref_id":"0044246"}}}


id: GO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A storage vacuole that contains a lytic vacuole; identified in plants.","definition_xrefs":["PMID:11739409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"protein storage vacuole","termid":"GO:0000326"}


id: PBO:0042272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7 pseudogene 1","termid":"PBO:0042272"}


id: PBO:0077105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 3","termid":"PBO:0077105"}


id: PR:O94279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium-dependent phosphatase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium-dependent phosphatase P8B7.31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.31","secondary_identifiers":["UniProtKB:O94279"],"synonyms":[{"name":"Spom972h-MDP1","type":"exact"}],"termid":"PR:O94279"}


id: PBO:0061667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP50 divergent transcript","termid":"PBO:0061667"}


id: GO:0050152
data:
  {"annotated_genes":["SJAG_02276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74119],"is_not":false,"summary":null,"term":"GO:0050152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a monoamide of a dicarboxylic acid + H2O = a dicarboxylate + NH3.","definition_xrefs":["EC:3.5.1.3","MetaCyc:OMEGA-AMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"omega-amidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:11716"],"synonyms":[{"name":"alpha-keto acid-omega-amidase activity","type":"related"},{"name":"omega-amidodicarboxylate amidohydrolase activity","type":"related"},{"name":"w-amidase activity","type":"exact"}],"termid":"GO:0050152","terms_by_termid":{"GO:0050152":null}}


id: GO:0018982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vanillin, an aromatic hydrocarbon which occurs naturally in black vanilla bean pods and can be obtained as a by-product of the pulp and paper industry by the oxidative breakdown of lignin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vanillin metabolic process","secondary_identifiers":["UM-BBD_pathwayID:van"],"synonyms":[{"name":"vanillic aldehyde metabolic process","type":"exact"},{"name":"vanillic aldehyde metabolism","type":"exact"},{"name":"vanillin metabolism","type":"exact"}],"termid":"GO:0018982"}


id: GO:1900403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900403)","synonyms":[{"name":"negative regulation of amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900403"}


id: PR:Q9UT98
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos5 gene.","definition_xrefs":["UniProtKB:Q9UT98","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH kinase pos5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.01c","synonyms":[{"name":"Spom972h-pos5","type":"exact"}],"termid":"PR:Q9UT98"}


id: PBO:0066153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB binding protein 6, ubiquitin ligase","termid":"PBO:0066153"}


id: MONDO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the respiratory system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory system benign neoplasm","secondary_identifiers":["MEDGEN:635669","NCIT:C8531","UMLS:C0497556","DOID:0050621","SCTID:255166003"],"synonyms":[{"name":"respiratory system benign neoplasm","type":"exact"}],"termid":"MONDO:0000382","xrefs":{"Monarch":{"xref_id":"0000382"}}}


id: GO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:tb","GOC:signaling","GOC:dph","PMID:12675914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating dopamine receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by dopamine receptor signalling pathway","type":"related"},{"name":"dopamine receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0060158"}


id: GO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity","synonyms":[{"name":"NK cell mediated cell death","type":"exact"},{"name":"NK cell mediated cell killing","type":"exact"},{"name":"NK cell mediated cytolysis","type":"related"},{"name":"NK cell mediated cytotoxicity","type":"exact"},{"name":"killer activity","type":"related"},{"name":"natural killer cell mediated cell death","type":"exact"},{"name":"natural killer cell mediated cell killing","type":"exact"},{"name":"natural killer cell mediated cytolysis","type":"related"},{"name":"natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042267"}


id: MONDO:0019916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 16","secondary_identifiers":["icd11.foundation:635736420","GARD:19336","MEDGEN:1650997","Orphanet:96185","UMLS:C4750769"],"synonyms":[{"name":"UPD(16)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 16","type":"exact"}],"termid":"MONDO:0019916","xrefs":{"Monarch":{"xref_id":"0019916"}}}


id: MONDO:0004618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diplegia of upper limb","secondary_identifiers":["MEDGEN:509631","SCTID:54099005","ICD9:344.2","DOID:862","UMLS:C0154701"],"synonyms":[{"name":"diplegia of upper limbs","type":"exact"},{"name":"diplegia, upper","type":"exact"}],"termid":"MONDO:0004618","xrefs":{"Monarch":{"xref_id":"0004618"}}}


id: GO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move.","definition_xrefs":["PMID:20696843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"tendon development","termid":"GO:0035989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon sheath development","termid":"GO:0002932"}


id: PBO:0067344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 441, pseudogene","termid":"PBO:0067344"}


id: GO:1990081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine trimethylamine to initiate a change in cell activity.","definition_xrefs":["PMID:16878137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trace-amine receptor activity","termid":"GO:0001594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"trimethylamine receptor activity","termid":"GO:1990081"}


id: PBO:0017578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1 (predicted)","termid":"PBO:0017578"}


id: MONDO:1012462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, pig","secondary_identifiers":["OMIA:001813-9823"],"termid":"MONDO:1012462","xrefs":{"Monarch":{"xref_id":"1012462"}}}


id: PBO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit (predicted)","termid":"PBO:0004490"}


id: PBO:0083425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2","termid":"PBO:0083425"}


id: PBO:0087711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087711"}


id: PBO:0084712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane half-type ABC transporter; required for respiratory growth at high temperature; localizes to vacuole membrane in response to H2O2; similar to human TAP1 and TAP2 implicated in bare lymphocyte syndrome and Wegener-like granulomatosis","termid":"PBO:0084712"}


id: PBO:0063087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAQR5 divergent transcript","termid":"PBO:0063087"}


id: PBO:0055287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2714","termid":"PBO:0055287"}


id: PBO:0116994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK5 antisense RNA 1","termid":"PBO:0116994"}


id: PBO:0028077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation","termid":"PBO:0028077"}


id: GO:0018653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity (obsolete GO:0018653)","termid":"GO:0018653"}


id: MONDO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful asymmetric asynchronous sensory and motor peripheral neuropathy involving isolated damage to at least 2 separate nerve areas; associated with (but not limited to) systemic disorders such as diabetes, vasculitis, amyloidosis, direct tumor involvement, polyarteritis nodosa, rheumatoid arthritis, systemic lupus erythematosus, and paraneoplastic syndromes. It also may be associated with Lyme disease, Wegener's granulomatosis, Sjogren syndrome, cryoglobulinemia, hypereosinophilia, temporal arteritis, scleroderma, sarcoidosis, leprosy, acute viral hepatitis A, and acquired immunodeficiency syndrome.","definition_xrefs":["NCIT:C70938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuritis multiplex","secondary_identifiers":["MEDGEN:101790","icd11.foundation:1838368265","GARD:7056","ICD9:354.5","SCTID:30292005","ICD10CM:G58.7","UMLS:C0151295","DOID:1835"],"synonyms":[{"name":"mononeuritis multiplex","type":"exact"}],"termid":"MONDO:0002128","xrefs":{"Monarch":{"xref_id":"0002128"}}}


id: FYPO:0004066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is increased.","definition_xrefs":["PomBase:mah","PMID:19328067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at protein coding gene","synonyms":[{"name":"increased protein localisation to chromatin at protein coding gene","type":"exact"},{"name":"increased protein localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004066"}


id: PBO:0053466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 428","termid":"PBO:0053466"}


id: MONDO:0014989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any uncombable hair syndrome in which the cause of the disease is a mutation in the TGM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"uncombable hair syndrome","termid":"MONDO:0008621"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncombable hair syndrome 2","secondary_identifiers":["MEDGEN:934616","UMLS:C4310649","OMIM:617251","GARD:16216"],"synonyms":[{"name":"TGM3 uncombable hair syndrome","type":"exact"},{"name":"UHS2","type":"exact"},{"name":"uncombable hair syndrome 2","type":"exact"},{"name":"uncombable hair syndrome 2; UHS2","type":"exact"},{"name":"uncombable hair syndrome caused by mutation in TGM3","type":"exact"},{"name":"uncombable hair syndrome type 2","type":"exact"}],"termid":"MONDO:0014989","xrefs":{"Monarch":{"xref_id":"0014989"}}}


id: PBO:0083798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for pre-mRNA splicing; associates transiently with the spliceosomal NTC ('nineteen complex') and acts after Prp2p to promote the first catalytic reaction of splicing","termid":"PBO:0083798"}


id: GO:0006969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete melanotic tumor response (obsolete GO:0006969)","synonyms":[{"name":"melanotic mass response","type":"exact"},{"name":"melanotic tumor response","type":"exact"}],"termid":"GO:0006969"}


id: GO:0019358
data:
  {"annotated_genes":["SJAG_03298","SJAG_00957","SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90896,92532,111608],"is_not":false,"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The generation of nicotinate nucleotide without de novo synthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinate nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinate nucleotide biosynthesis, salvage pathway","type":"exact"},{"name":"nicotinate nucleotide biosynthetic process, salvage pathway","type":"exact"}],"termid":"GO:0019358","terms_by_termid":{"GO:0019358":null}}


id: PBO:0110829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, amino acid sensing, Cha4","termid":"PBO:0110829"}


id: PBO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kelley-Seegmiller syndrome","termid":"PBO:0011443"}


id: PBO:0040947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 18","termid":"PBO:0040947"}


id: PBO:0003040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin","termid":"PBO:0003040"}


id: MONDO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from fungi.","definition_xrefs":["NCIT:C27342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal gastritis","secondary_identifiers":["MEDGEN:181761","SCTID:723097009","UMLS:C0948638","DOID:4034"],"synonyms":[{"name":"Fungi caused gastritis (disease)","type":"exact"},{"name":"Fungi gastritis (disease)","type":"exact"},{"name":"fungal gastritis","type":"exact"}],"termid":"MONDO:0002843","xrefs":{"Monarch":{"xref_id":"0002843"}}}


id: FYPO:0005265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lead ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to lead","synonyms":[{"name":"resistance to lead during mitotic cell cycle","type":"related"},{"name":"resistance to lead during vegetative growth","type":"exact"},{"name":"resistance to lead ions","type":"exact"},{"name":"resistant to lead","type":"exact"}],"termid":"FYPO:0005265"}


id: PBO:0084131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter; capable of transporting a broad range of substrates including: glucose, fructose, mannose and galactose; polyol transporter that supports the growth on and uptake of xylitol with low affinity when overexpressed in a strain deleted for hexose family members; nearly identical in sequence to Hxt9p; has similarity to major facilitator superfamily (MFS) transporters; involved in pleiotropic drug resistance","termid":"PBO:0084131"}


id: GO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that regulates heart induction.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by canonical Wnt signaling pathway (obsolete GO:0100012)","termid":"GO:0100012"}


id: MONDO:1010921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis ossificans, non-human animal","termid":"MONDO:1010197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, cattle","secondary_identifiers":["OMIA:000697-9913"],"termid":"MONDO:1010921","xrefs":{"Monarch":{"xref_id":"1010921"}}}


id: GO:0019033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying between the capsid and envelope of a virus, varying in thickness and often distributed asymmetrically.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral tegument","secondary_identifiers":["Wikipedia:Viral_tegument"],"termid":"GO:0019033"}


id: PBO:0112592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit Dps1/Coq1","termid":"PBO:0112592"}


id: GO:0019264
data:
  {"annotated_genes":["SJAG_01766","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73838,75098],"is_not":false,"summary":null,"term":"GO:0019264"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine biosynthetic process","termid":"GO:0006545"},{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"glycine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYSYN-PWY"],"synonyms":[{"name":"glycine anabolism from serine","type":"exact"},{"name":"glycine formation from serine","type":"exact"},{"name":"glycine synthesis from serine","type":"exact"}],"termid":"GO:0019264","terms_by_termid":{"GO:0019264":null}}


id: GO:0102136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 3-epi-6-deoxocathasterone + reduced (NADPH-hemoprotein reductase) + O2 = 6=deoxotyphasterol + oxidized (NADPH-hemoprotein reductase) + H2O.","definition_xrefs":["GOC:pz","PMID:17138693"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-epi-6-deoxocathasterone C-23 hydroxylase activity (obsolete GO:0102136)","termid":"GO:0102136"}


id: MONDO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"phakomatosis cesiomarmorata","secondary_identifiers":["Orphanet:79484","GARD:19024","MEDGEN:825141","SCTID:703286006","UMLS:C3839296","ICD9:759.6"],"synonyms":[{"name":"phakomatosis caesiomarmorata","type":"exact"},{"name":"phakomatosis cesiomarmorata","type":"exact"},{"name":"phakomatosis pigmentovascularis type 5","type":"exact"}],"termid":"MONDO:0019326","xrefs":{"Monarch":{"xref_id":"0019326"}}}


id: PBO:0060453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase","termid":"PBO:0060453"}


id: GO:1904084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of epiboly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of epiboly (obsolete GO:1904084)","synonyms":[{"name":"down regulation of epiboly","type":"exact"},{"name":"down-regulation of epiboly","type":"exact"},{"name":"downregulation of epiboly","type":"exact"},{"name":"inhibition of epiboly","type":"narrow"},{"name":"negative regulation of epiboly","type":"exact"}],"termid":"GO:1904084"}


id: GO:0047054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-N-methylcoclaurine + (R)-N-methylcoclaurine + [reduced NADPH--hemoprotein reductase] + O2 = berbamunine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:23576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"berbamunine synthase activity","secondary_identifiers":["MetaCyc:1.1.3.34-RXN","EC:1.14.19.66"],"synonyms":[{"name":"heme-thiolate","type":"related"}],"termid":"GO:0047054"}


id: MONDO:0957097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic-uremic syndrome","termid":"MONDO:0001549"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary hemolytic uremic syndrome","secondary_identifiers":["GARD:22330","MEDGEN:1825935","UMLS:C5680355","Orphanet:576742","OMIMPS:235400"],"synonyms":[{"name":"genetic hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0957097","xrefs":{"Monarch":{"xref_id":"0957097"}}}


id: PBO:0074491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 2","termid":"PBO:0074491"}


id: GO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of arachidonate secretion","synonyms":[{"name":"regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090237"}


id: PBO:0052115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 3","termid":"PBO:0052115"}


id: MONDO:0019341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","secondary_identifiers":["NANDO:1200607","NANDO:2200826"],"termid":"MONDO:0019341","xrefs":{"Monarch":{"xref_id":"0019341"}}}


id: PBO:0049602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 5","termid":"PBO:0049602"}


id: PBO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain ArfGEF 2","termid":"PBO:0051803"}


id: GO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabino-hex-3-ulose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["PMID:11839305","RHEA:25900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"6-phospho-3-hexuloisomerase activity","secondary_identifiers":["EC:5.3.1.27","MetaCyc:R12-RXN"],"synonyms":[{"name":"HUMPI","type":"exact"},{"name":"hexulose-6-phosphate isomerase activity","type":"exact"}],"termid":"GO:0043800"}


id: GO:0030656
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115695,90915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0030656","terms_by_termid":{"GO:0090180":null}}


id: GO:0034767
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"up regulation of transmembrane ion transport","type":"exact"},{"name":"up-regulation of transmembrane ion transport","type":"exact"},{"name":"activation of transmembrane ion transport","type":"narrow"},{"name":"positive regulation of ion membrane transport","type":"exact"},{"name":"positive regulation of ion transmembrane transport","type":"broad"},{"name":"positive regulation of transmembrane ion transport","type":"exact"},{"name":"stimulation of transmembrane ion transport","type":"narrow"},{"name":"upregulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034767","terms_by_termid":{"GO:1905665":null}}


id: PBO:0080491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 8 pseudogene 1","termid":"PBO:0080491"}


id: MONDO:0010743
data:
  {"annotated_genes":["SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89057],"is_not":false,"summary":null,"term":"MONDO:0010743"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01732":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:852","UMLS:C1839163","MESH:C564052","NCIT:C176617","GARD:5176","MEDGEN:326416","OMIM:313900"],"synonyms":[{"name":"THC","type":"related"},{"name":"THC1","type":"related"},{"name":"X-linked thrombocytopenia","type":"related"},{"name":"X-linked thrombocytopenia with normal platelets","type":"exact"},{"name":"XLT","type":"related"},{"name":"thrombocytopenia 1","type":"exact"},{"name":"thrombocytopenia type 1","type":"exact"},{"name":"thrombocytopenia, X-linked","type":"related"},{"name":"thrombocytopenia, X-linked, 1","type":"related"},{"name":"thrombocytopenia, X-linked, X-linked recessive","type":"exact"},{"name":"thrombocytopenia, X-linked, intermittent","type":"related"},{"name":"thrombocytopenia, X-linked, intermittent, X-linked recessive","type":"exact"}],"termid":"MONDO:0010743","terms_by_termid":{"MONDO:0010743":null},"xrefs":{"Monarch":{"xref_id":"0010743"}}}


id: GO:0102919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + O2 = 5,6-dimethylbenzimidazole + D-erythrose 4-phosphate + dialuric acid.","definition_xrefs":["EC:1.13.11.79","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5,6-dimethylbenzimidazole synthase activity","secondary_identifiers":["RHEA:27345","MetaCyc:RXN-8771"],"termid":"GO:0102919"}


id: GO:0060324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"face development","termid":"GO:0060324"}


id: GO:1900230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation in or on host organism.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of single-species biofilm formation","termid":"GO:1900192"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation in or on host organism","termid":"GO:1900228"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation in or on host organism","synonyms":[{"name":"activation of single-species biofilm formation in or on host organism","type":"narrow"},{"name":"up regulation of single-species biofilm formation in or on host organism","type":"exact"},{"name":"up-regulation of single-species biofilm formation in or on host organism","type":"exact"},{"name":"upregulation of single-species biofilm formation in or on host organism","type":"exact"}],"termid":"GO:1900230"}


id: PBO:0040107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 2","termid":"PBO:0040107"}


id: MONDO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 1","secondary_identifiers":["GARD:20842","Orphanet:262191","UMLS:C4518488","MEDGEN:1379629","SCTID:726338000"],"synonyms":[{"name":"partial duplication of chromosome type 1","type":"exact"},{"name":"partial trisomy of chromosome 1","type":"exact"}],"termid":"MONDO:0016921","xrefs":{"Monarch":{"xref_id":"0016921"}}}


id: GO:0042496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a diacylated bacterial lipopeptide stimulus is received by a cell and converted into a molecular signal. Diacylated bacterial lipoproteins are lipopeptides of bacterial origin containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["PMID:12077222","PMID:12524386","PMID:2757794","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of bacterial lipopeptide","termid":"GO:0070340"},{"relation_name":"is_a","term_name":"response to diacyl bacterial lipopeptide","termid":"GO:0071724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of diacyl bacterial lipopeptide","synonyms":[{"name":"detection of diacylated bacterial lipoprotein","type":"exact"},{"name":"perception of diacylated bacterial lipopeptide","type":"related"},{"name":"perception of diacylated bacterial lipoprotein","type":"related"}],"termid":"GO:0042496"}


id: PBO:0028544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_regulatory_region_sequence-specific_DNA_binding_during_cellular_response_to_phosphate_starvation","termid":"PBO:0028544"}


id: PBO:0070347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 20","termid":"PBO:0070347"}


id: GO:0005371
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114274],"is_not":false,"summary":null,"term":"GO:0005371"},{"annotations":[74309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tricarboxylate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005370"],"synonyms":[{"name":"tricarboxylate carrier activity","type":"exact"}],"termid":"GO:0005371","terms_by_termid":{"GO:0005371":null,"GO:0071913":null}}


id: PBO:0002615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase (predicted)","termid":"PBO:0002615"}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: PBO:0039840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 10","termid":"PBO:0039840"}


id: GO:0035693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising nitric oxide synthase 2 and CD74. This stable complex formation is thought to prevent CD74 degradation by caspases.","definition_xrefs":["GOC:BHF","PMID:18003616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NOS2-CD74 complex","termid":"GO:0035693"}


id: GO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with (1->3)-beta-D-glucans to initiate an innate immune response.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide immune receptor activity","termid":"GO:0001873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan immune receptor activity","synonyms":[{"name":"(1,3)-beta-D-glucan receptor activity","type":"exact"},{"name":"(1->3)-beta-D-glucan receptor activity","type":"broad"},{"name":"1,3-beta-D-glucan receptor activity","type":"exact"},{"name":"beta-1,3-D-glucan receptor activity","type":"exact"},{"name":"zymosan receptor activity","type":"narrow"}],"termid":"GO:0001874"}


id: GO:0031804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 7 metabotropic glutamate receptor binding","synonyms":[{"name":"type 7 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031804"}


id: PBO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer associated ESR1 regulating natural antisense transcript 1","termid":"PBO:0040922"}


id: GO:0048507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem development","termid":"GO:0048507"}


id: MONDO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common hemangioma characterized by the presence of capillary-sized vascular channels without prominent epithelioid endothelial cells.","definition_xrefs":["NCIT:C7457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary hemangioma","secondary_identifiers":["ICDO:9131/0","MEDGEN:64643","UMLS:C0206733","MESH:D018324","DOID:2725","SCTID:56975005"],"synonyms":[{"name":"capillary angioma","type":"exact"},{"name":"capillary hemangioma","type":"exact"},{"name":"capillary hemangioma (morphologic abnormality)","type":"exact"},{"name":"cellular hemangioma of infancy","type":"narrow"},{"name":"cellular hemangioma of infancy (strawberry nevus)","type":"narrow"},{"name":"congenital vascular hamartoma","type":"exact"},{"name":"congenital vascular naevus","type":"exact"},{"name":"infantile hemangioma","type":"narrow"},{"name":"juvenile hemangioma","type":"narrow"},{"name":"strawberry haemangioma","type":"exact"},{"name":"strawberry nevus","type":"exact"},{"name":"strawberry nevus of skin","type":"exact"}],"termid":"MONDO:0002407","xrefs":{"Monarch":{"xref_id":"0002407"}}}


id: PBO:0067216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 283, pseudogene","termid":"PBO:0067216"}


id: MONDO:0011060
data:
  {"annotated_genes":["SJAG_02919","SJAG_03815","SJAG_00624","SJAG_00404","SJAG_00750","SJAG_04567","SJAG_01242","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88769,88768,88770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"},{"annotations":[88783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011547"},{"annotations":[88151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013859"},{"annotations":[87269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014565"},{"annotations":[86925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014673"},{"annotations":[87823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008925"}]},"cv_name":"mondo","definition":"Early-onset non-syndromic cataract is a rare, genetic, non-syndromic developmental defect of the eye, with high clinical and genetic heterogeneity, most frequently characterized by bilateral, symmetrical, non-progressive cataracts which present at birth or in early-childhood. Additional ocular manifestations (e.g. anterior segment dysgenesis, colobomas, nystagmus, microcornea, microphthalmia, myopia) may be associated, however other organs/systems are usually not affected.","definition_xrefs":["Orphanet:91492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00624":null,"SJAG_00750":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset non-syndromic cataract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601371","icd11.foundation:1080602978","UMLS:C1832423","MEDGEN:371326","GARD:16801"],"synonyms":[{"name":"cataract, age-related nuclear","type":"related"},{"name":"nuclear sclerosis of the lens","type":"related"}],"termid":"MONDO:0011060","terms_by_termid":{"MONDO:0008925":null,"MONDO:0011547":null,"MONDO:0013411":null,"MONDO:0013859":null,"MONDO:0014565":null,"MONDO:0014673":null},"xrefs":{"Monarch":{"xref_id":"0011060"}}}


id: MONDO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Staphylococcal necrotizing pneumonia is a rare, bacterial, pulmonary infectious disease, caused by a Panton-Valentine leukocidin-producing Staphylococcus aureus strain, characterized by severe respiratory failure, extensive, rapidly progressing pneumonia and hemorrhagic lung necrosis. Patients typically present with influenza-like symptoms, such as fever, cough, and chest pain, as well as hemoptysis, hypotension, leukopenia, and severe respiratory symptoms that rapidly evolve to acute respiratory distress syndrome and septic shock. High mortality is associated.","definition_xrefs":["Orphanet:36238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal necrotizing pneumonia","secondary_identifiers":["UMLS:C4706659","MEDGEN:1637863","GARD:18821","SCTID:763888005"],"termid":"MONDO:0018183","xrefs":{"Monarch":{"xref_id":"0018183"}}}


id: PBO:0080667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 12","termid":"PBO:0080667"}


id: PBO:0077501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 219","termid":"PBO:0077501"}


id: FYPO:0006581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fenpropimorph. Cells stop growing (and may die) at a concentration of fenpropimorph that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to fenpropimorph","synonyms":[{"name":"hypersensitive to fenpropimorph","type":"exact"},{"name":"sensitive to fenpropimorph during mitotic cell cycle","type":"related"},{"name":"sensitive to fenpropimorph during vegetative growth","type":"exact"}],"termid":"FYPO:0006581"}


id: MONDO:1010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, non-human animal","secondary_identifiers":["OMIA:000697"],"termid":"MONDO:1010197","xrefs":{"Monarch":{"xref_id":"1010197"}}}


id: GO:0033700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a phospholipid out of a cell or organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phospholipid efflux","synonyms":[{"name":"phospholipid export","type":"exact"}],"termid":"GO:0033700"}


id: PBO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 126","termid":"PBO:0044838"}


id: FYPO:0002639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is greater than normal before the onset of mitotic anaphase.","definition_xrefs":["PMID:22065639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"increased distance between mitotic kinetochores","type":"related"},{"name":"increased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"increased interkinetochore distance before anaphase onset","type":"exact"},{"name":"increased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"increased sister kinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0002639"}


id: GO:1905326
data:
  {"annotated_genes":["SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115800],"is_not":false,"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["GO_REF:0000058","PMID:26483559","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of meiosis I spindle assembly checkpoint","termid":"GO:1905325"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiosis I spindle assembly checkpoint","type":"narrow"},{"name":"up regulation of meiosis I spindle assembly checkpoint","type":"exact"},{"name":"up-regulation of meiosis I spindle assembly checkpoint","type":"exact"},{"name":"upregulation of meiosis I spindle assembly checkpoint","type":"exact"}],"termid":"GO:1905326","terms_by_termid":{"GO:1905326":null}}


id: PBO:0035836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035836"}


id: MONDO:0018248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-seizures-macrocephaly-obesity syndrome is a rare syndromic obesity due to complex chromosomal rearrangement characterized by development delay and intellectual disability, childhood-onset obesity, seizures, poor coordination and broad-based gait, macrocephaly and mild dysmorphic features (such as narrow palpebral fissures, malar hypoplasia and thin upper lips), eczema, ocular abnormalities and a social personality.","definition_xrefs":["Orphanet:369950"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-seizures-macrocephaly-obesity syndrome","secondary_identifiers":["GARD:21583","UMLS:C4749455","MEDGEN:1650833"],"synonyms":[{"name":"Der(8)t(8;12)","type":"exact"}],"termid":"MONDO:0018248","xrefs":{"Monarch":{"xref_id":"0018248"}}}


id: PBO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit beta 1","termid":"PBO:0039659"}


id: PBO:0114379
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"removed the human ortholog because XPNPEP1 and XPNPEP1 are fra1, although this could be a divergent paralog of fra1","termid":"PBO:0114379"}


id: PBO:0062545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 1 pseudogene","termid":"PBO:0062545"}


id: PBO:0050921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 4","termid":"PBO:0050921"}


id: MONDO:0013921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the TICAM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 4","secondary_identifiers":["MEDGEN:766783","UMLS:C3553869","OMIM:614850"],"synonyms":[{"name":"Herpes simplex encephalitis, susceptibility to, type 4","type":"exact"},{"name":"IIAE6","type":"related"},{"name":"TICAM1 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 6","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 6","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 6","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in TICAM1","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0013921","xrefs":{"Monarch":{"xref_id":"0013921"}}}


id: PBO:0005635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein Mrp49 (predicted)","termid":"PBO:0005635"}


id: PBO:0078634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 4","termid":"PBO:0078634"}


id: GO:1990770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry in the intestine between the stomach and the large intestine.","definition_xrefs":["PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"small intestine smooth muscle contraction","termid":"GO:1990770"}


id: GO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast differentiation","termid":"GO:0045670"}


id: FYPO:0008144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount heme O measured in a cell is too low to detect.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme absent from cell","termid":"FYPO:0008142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"heme O absent from cell","termid":"FYPO:0008144"}


id: PR:Q9UUD4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug124 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 124 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.06c","synonyms":[{"name":"Spom972h-mug124","type":"exact"}],"termid":"PR:Q9UUD4"}


id: PBO:0039958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 1","termid":"PBO:0039958"}


id: SO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Describes the positions in a sequence where the authors are unsure about the sequence assignment.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_uncertainty","secondary_identifiers":["BS:00181"],"synonyms":[{"name":"INSDC_feature:unsure","type":"exact"},{"name":"unsure","type":"exact"}],"termid":"SO:0001086"}


id: GO:0009263
data:
  {"annotated_genes":["SJAG_02874","SJAG_02948","SJAG_04627","SJAG_04657","SJAG_00885","SJAG_04665","SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[97401,94330,109229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[81261,71664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70219,72798,94331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71663,81284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"deoxyribonucleotide metabolic process","termid":"GO:0009262"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleotide anabolism","type":"exact"},{"name":"deoxyribonucleotide biosynthesis","type":"exact"},{"name":"deoxyribonucleotide formation","type":"exact"},{"name":"deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009263","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: PBO:0046391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP400 pseudogene 1","termid":"PBO:0046391"}


id: GO:1903102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["PMID:19037259","GOC:TermGenie","GO_REF:0000068","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","termid":"GO:1903100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate biosynthetic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate anabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate biosynthesis","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate formation","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1903102"}


id: PBO:0076832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component","termid":"PBO:0076832"}


id: PBO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Hrp1","termid":"PBO:0001404"}


id: GO:1900037
data:
  {"annotated_genes":["SJAG_03345","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91141,118413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01585":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular response to hypoxic stress","type":"exact"},{"name":"regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900037","terms_by_termid":{"GO:1900039":null}}


id: GO:0035406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a tyrosine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-tyrosine phosphorylation (obsolete GO:0035406)","synonyms":[{"name":"histone tyrosine phosphorylation","type":"exact"}],"termid":"GO:0035406"}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: MONDO:0041752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculoid form of leprosy that is characterized by a small number of hypopigmented, well-bordered, anesthetic skin lesions with a low bacillary load, early peripheral nerve impairment, and a T-helper 1 (Th1)–mediated immune response.","definition_xrefs":["PMID:27219008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leprosy","termid":"MONDO:0005124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paucibacillary leprosy","secondary_identifiers":["icd11.foundation:1800264981","MESH:D056005","MEDGEN:288331","SCTID:416483009","UMLS:C1562908"],"synonyms":[{"name":"paucibacillary leprosy","type":"exact"},{"name":"tuberculoid leprosy","type":"related"}],"termid":"MONDO:0041752","xrefs":{"Monarch":{"xref_id":"0041752"}}}


id: PBO:0054093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1446","termid":"PBO:0054093"}


id: GO:0031122
data:
  {"annotated_genes":["SJAG_03052","SJAG_02695","SJAG_01756","SJAG_04841","SJAG_03540","SJAG_00918","SJAG_00856","SJAG_02737","SJAG_04074","SJAG_04003","SJAG_02761","SJAG_02040","SJAG_01613","SJAG_01215","SJAG_02286","SJAG_02509","SJAG_03835","SJAG_02609","SJAG_02886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69590,72908,73338,81801,89622,98897,101146,102020,104269,104392,109400,114134,119218,120710],"is_not":false,"summary":null,"term":"GO:0031122"},{"annotations":[78032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[118970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[102314,108419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030953"},{"annotations":[109479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043622"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_00918":null,"SJAG_01215":null,"SJAG_01613":null,"SJAG_01756":null,"SJAG_02040":null,"SJAG_02286":null,"SJAG_02509":null,"SJAG_02609":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04074":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic microtubule organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic microtubule organisation","type":"exact"},{"name":"cytoplasmic microtubule organization and biogenesis","type":"related"}],"termid":"GO:0031122","terms_by_termid":{"GO:0030953":null,"GO:0030954":null,"GO:0031122":null,"GO:0043622":null,"GO:0060172":null}}


id: GO:0034940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-oxo-4,5-dihydropyrrole-2-carboxylate + 2 H2O = 2-oxoglutarate + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-oxo-4,5-dihydropyrrole-2-carboxylate amidase activity (obsolete GO:0034940)","termid":"GO:0034940"}


id: GO:2000983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ATP citrate synthase activity","synonyms":[{"name":"regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"regulation of ATP-citric lyase activity","type":"exact"},{"name":"regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"regulation of citrate cleavage enzyme activity","type":"related"},{"name":"regulation of citrate-ATP lyase activity","type":"exact"},{"name":"regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000983"}


id: MOD:01727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"derives_from","term_name":"cysTMT6plex-zero reporter+balance reagent cysteine disulfide","termid":"MOD:01822"},{"relation_name":"derives_from","term_name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","termid":"MOD:01823"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-126 reporter fragment","type":"exact"}],"termid":"MOD:01727"}


id: GO:0018744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonene-1,2-epoxide + H2O = limonene-1,2-diol. Other substrates include alicyclic and 1-methyl-substituted epoxides, such as 1-methylcyclohexene oxide, indene oxide and cyclohexene oxide.","definition_xrefs":["EC:3.3.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"limonene-1,2-epoxide hydrolase activity","secondary_identifiers":["RHEA:10700","UM-BBD_reactionID:r0734","MetaCyc:3.3.2.8-RXN"],"synonyms":[{"name":"limonene oxide hydrolase activity","type":"related"}],"termid":"GO:0018744"}


id: PBO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bafilomycin_A1","termid":"PBO:0031466"}


id: FYECO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lead ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Pb ions","synonyms":[{"name":"lead ions added","type":"exact"}],"termid":"FYECO:0000036"}


id: PBO:0079043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-5","termid":"PBO:0079043"}


id: PBO:0039851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 18","termid":"PBO:0039851"}


id: PBO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor like tyrosine kinase","termid":"PBO:0072724"}


id: GO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins.","definition_xrefs":["PMID:27026396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microfibril","synonyms":[{"name":"extended fibrils","type":"exact"},{"name":"fibrillin","type":"related"}],"termid":"GO:0001527"}


id: GO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of lysine, carried by a specialized lysine-accepting tRNA (possessing a CUA anticodon), to pyrrolysine (a lysine with an amide linkage to a (4R,5R)-4-substituted pyrroline-5-carboxylate).","definition_xrefs":["PMID:12029131","PMID:12029132","PMID:12121639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"conversion of lysyl-tRNA to pyrrolysyl-tRNA","termid":"GO:0001720"}


id: PBO:0029637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus","termid":"PBO:0029637"}


id: PBO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ortholog qualifier","termid":"PBO:0006313"}


id: PBO:0088461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2","termid":"PBO:0088461"}


id: MONDO:0850303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the supratentorial brain.","definition_xrefs":["DOID:0080843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supratentorial meningioma","secondary_identifiers":["MEDGEN:234913","UMLS:C1336537","NCIT:C7048"],"termid":"MONDO:0850303","xrefs":{"Monarch":{"xref_id":"0850303"}}}


id: PBO:0113297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) subunit; essential for control of translational accuracy; phosphorylation by C-terminal domain kinase I (CTDK-I) enhances translational accuracy; methylated on one or more arginine residues by Hmt1p; required for release of methyltransferase Bud23p from pre-40S precursor; homologous to mammalian ribosomal protein S2 and bacterial S5","termid":"PBO:0113297"}


id: GO:0030674
data:
  {"annotated_genes":["SJAG_02409","SJAG_03941","SJAG_04609","SJAG_03342","SJAG_00397","SJAG_01952","SJAG_05315","SJAG_02805","SJAG_00164","SJAG_03726","SJAG_03536","SJAG_03945","SJAG_04389","SJAG_03920","SJAG_02500","SJAG_04498","SJAG_01686","SJAG_04466","SJAG_03867","SJAG_01324","SJAG_00804","SJAG_04315","SJAG_02453","SJAG_02240","SJAG_00184","SJAG_04076","SJAG_04565","SJAG_03664","SJAG_00335","SJAG_04647","SJAG_03681","SJAG_03023","SJAG_04930","SJAG_01196","SJAG_00651","SJAG_03218","SJAG_03905","SJAG_01068","SJAG_01809","SJAG_03081","SJAG_00379","SJAG_04100","SJAG_01199","SJAG_00303","SJAG_01047","SJAG_05179","SJAG_01772","SJAG_02831","SJAG_06382","SJAG_03170","SJAG_02165","SJAG_03116","SJAG_04509","SJAG_03602","SJAG_04959","SJAG_04455","SJAG_00809","SJAG_03596","SJAG_04259","SJAG_04671","SJAG_00032","SJAG_03622","SJAG_04099","SJAG_04763","SJAG_01771","SJAG_03230","SJAG_05286","SJAG_01305","SJAG_05260","SJAG_03752","SJAG_04513","SJAG_01778","SJAG_03123","SJAG_01263","SJAG_01022","SJAG_02079","SJAG_03628","SJAG_02074","SJAG_02204","SJAG_04640","SJAG_03848","SJAG_00112","SJAG_04274","SJAG_02391","SJAG_05341","SJAG_03710","SJAG_04963","SJAG_01464","SJAG_04558","SJAG_03651","SJAG_01617","SJAG_00185","SJAG_01916","SJAG_01403","SJAG_01794","SJAG_01711","SJAG_00087","SJAG_05226","SJAG_04739","SJAG_00656","SJAG_01509","SJAG_03543","SJAG_00115","SJAG_02651","SJAG_03103","SJAG_01876","SJAG_01605","SJAG_03377","SJAG_00800","SJAG_04213","SJAG_02846","SJAG_03146","SJAG_02458","SJAG_03527","SJAG_03217","SJAG_03776","SJAG_01728","SJAG_02849","SJAG_07018","SJAG_04821","SJAG_00266","SJAG_00826","SJAG_04909","SJAG_02541","SJAG_00336","SJAG_02385","SJAG_02513","SJAG_04623","SJAG_00152","SJAG_01188","SJAG_00030","SJAG_00453","SJAG_00269","SJAG_01475","SJAG_02621","SJAG_03465","SJAG_01783","SJAG_04142","SJAG_03005","SJAG_03264","SJAG_05000","SJAG_04613","SJAG_02045","SJAG_03464","SJAG_04820","SJAG_03627","SJAG_01167","SJAG_00290","SJAG_04666","SJAG_00213","SJAG_00794","SJAG_03916","SJAG_02097","SJAG_00943","SJAG_04601","SJAG_02255","SJAG_02586","SJAG_01143","SJAG_04574","SJAG_00646","SJAG_03044","SJAG_00029","SJAG_02822","SJAG_01073","SJAG_05153","SJAG_04991","SJAG_01638","SJAG_05196","SJAG_03200","SJAG_01873","SJAG_04978","SJAG_04253","SJAG_04051","SJAG_01564","SJAG_04370","SJAG_04942","SJAG_00909","SJAG_00613","SJAG_05206","SJAG_00207","SJAG_02215","SJAG_00545","SJAG_03924","SJAG_01111","SJAG_04381","SJAG_03404","SJAG_03673","SJAG_03643","SJAG_02699","SJAG_00803","SJAG_00640","SJAG_02591","SJAG_04077","SJAG_00297","SJAG_00861","SJAG_02737","SJAG_03435","SJAG_03535","SJAG_00342","SJAG_02688","SJAG_03347","SJAG_03542","SJAG_03267","SJAG_04413","SJAG_03882","SJAG_04943","SJAG_05950","SJAG_02927","SJAG_04417","SJAG_03590","SJAG_05273","SJAG_02874","SJAG_00521","SJAG_00317","SJAG_00262","SJAG_04205","SJAG_02332","SJAG_00584","SJAG_03942","SJAG_02514","SJAG_04508","SJAG_04884","SJAG_02398","SJAG_02066","SJAG_03573","SJAG_03599","SJAG_00899","SJAG_01193","SJAG_04503","SJAG_06638","SJAG_01926","SJAG_00302","SJAG_02701","SJAG_00209","SJAG_00156","SJAG_03845","SJAG_00448","SJAG_00268","SJAG_00904","SJAG_01178","SJAG_02196","SJAG_01745","SJAG_00354","SJAG_01205","SJAG_00108","SJAG_05011","SJAG_00079","SJAG_02103","SJAG_02795","SJAG_01157","SJAG_03089","SJAG_03287","SJAG_02494","SJAG_01579","SJAG_02990","SJAG_04705","SJAG_03625","SJAG_04035","SJAG_00641","SJAG_04607","SJAG_04966","SJAG_00104","SJAG_02789","SJAG_02241","SJAG_02474","SJAG_01009","SJAG_05203","SJAG_02671","SJAG_03449","SJAG_01713","SJAG_03417","SJAG_03851","SJAG_00822","SJAG_03981","SJAG_01456","SJAG_03211","SJAG_01258","SJAG_02394","SJAG_03441","SJAG_04479","SJAG_04690","SJAG_00700","SJAG_02162","SJAG_03792","SJAG_04621","SJAG_03989","SJAG_03552","SJAG_00053","SJAG_03416","SJAG_02511","SJAG_04768","SJAG_00368","SJAG_01601","SJAG_04755","SJAG_02098","SJAG_04023","SJAG_02773","SJAG_00192","SJAG_01392","SJAG_04931","SJAG_02401","SJAG_01377","SJAG_02622","SJAG_03564","SJAG_00117","SJAG_00171","SJAG_02329","SJAG_04396","SJAG_01113","SJAG_01804","SJAG_00441","SJAG_01437","SJAG_01249","SJAG_04186","SJAG_02246","SJAG_01748","SJAG_03629","SJAG_00557","SJAG_02551","SJAG_04932","SJAG_04701","SJAG_01738","SJAG_03668","SJAG_04921","SJAG_02753","SJAG_04886","SJAG_00831","SJAG_01658"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67294,72274,73578,73589,73612,74018,74799,75164,76891,78179,78555,80092,80130,80309,80500,80512,80695,80982,81022,81600,81662,81824,81863,89264,89359,91207,91661,94100,94561,98101,98398,99491,101851,101860,102877,103858,104463,105670,107686,108710,110596,113031,115087,115191,115686,117928,119770,120138,120491,120615,120919],"is_not":false,"summary":null,"term":"GO:0030674"},{"annotations":[107999,112685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140312"},{"annotations":[93238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140449"},{"annotations":[117102,91241,114189,89911,95843,61470,114637,101663,62299,114592,105273,113222,119750,120902,109674,117317,64596,114590,114636,114591,113492,94722,114986,89736,115241,109955,116738,116588,113737,90032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140463"},{"annotations":[98049,79530,113503,80051,58570,90782,110321,114798,73759,62745,79407,96085,76224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035615"},{"annotations":[99956,106614,101217,93281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008093"},{"annotations":[114780,118978,104690,119065,108567,70615,114315,115965,108173,68526,104915,101254,113873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106006"},{"annotations":[59706,92294,101329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[59707,92295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160214"},{"annotations":[103705,103042,120569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140767"},{"annotations":[93242,105553,121398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"},{"annotations":[111310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140172"},{"annotations":[111311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140173"},{"annotations":[107738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140002"},{"annotations":[101060,93166,106046,112491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062072"},{"annotations":[100831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140008"},{"annotations":[111312,109902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140005"},{"annotations":[109903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990889"},{"annotations":[95849,99144,106682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140566"},{"annotations":[104385,97228,107444,111899,115802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140483"},{"annotations":[101906,119402,71814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005078"},{"annotations":[115209,117321,118784,120516,97402,107101,112859,120999,120730,99380,96536,103735,100605,101377,105722,111236,116064,104455,105443,100358,107887,108663,108096,82067,97343,74571,74863,108869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043495"},{"annotations":[89873,113688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990644"},{"annotations":[61092,67128,67064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"},{"annotations":[109500,92789,109625,107819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140474"},{"annotations":[108568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140443"},{"annotations":[104859,93282,94447,94724,107543,111209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140693"},{"annotations":[120163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990247"},{"annotations":[106255,110075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140517"},{"annotations":[102400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160134"},{"annotations":[109297,99152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180014"},{"annotations":[94325,109074,94738,119163,95838,77679,101297,100360,113440,101122,115803,76057,114483,89773,91124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035591"},{"annotations":[77073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030159"},{"annotations":[70551,119585,95791,92454,77942,61072,79624,77883,98219,78365,79778,101446,75656,111648,120676,73729,74647,114698,100022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005484"},{"annotations":[78252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005483"},{"annotations":[101789,100200,102930,105000,112162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140475"},{"annotations":[114854,104770,82138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106166"},{"annotations":[107931,119589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140473"},{"annotations":[109394,109306,96995,113756,102429,105623,92248,95387,109031,93308,114303,110737,105314,107739,97777,121149,108878,104810,75276,108208,101223,108346,108705,76730,90368,96239,92562,119645,121148,100502,96350,105118,114987,73330,62905,116753,95984,99747,91165,100953,103902,119597,116329,105364,120983,100600,90991,77352,77076,110711,98078,62679,97296,78909,79430,80088,110216,80388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003713"},{"annotations":[79335,79644,79857,79567,81441,73638,97807,78532,90669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003712"},{"annotations":[74987,111339,105908,106272,108976,75436,95098,93146,77114,106211,108706,80934,71853,114097,100813,79132,99139,95136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003714"},{"annotations":[118776,61198,106553,109200,111077,109181,117819,101564,118878,97455,103419,113035,106840,117673,99700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990756"},{"annotations":[112496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"An adaptor activity that brings together two or more macromolecules in contact, permitting those molecules to function in a coordinated way. The adaptor can bring together two proteins, or a protein and another macromolecule such as a lipid or a nucleic acid.","definition_xrefs":["GOC:bf","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular adaptor activity","termid":"GO:0060090"}],"gene_count":328,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00030":null,"SJAG_00032":null,"SJAG_00053":null,"SJAG_00079":null,"SJAG_00087":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00112":null,"SJAG_00115":null,"SJAG_00117":null,"SJAG_00152":null,"SJAG_00156":null,"SJAG_00164":null,"SJAG_00171":null,"SJAG_00184":null,"SJAG_00185":null,"SJAG_00192":null,"SJAG_00207":null,"SJAG_00209":null,"SJAG_00213":null,"SJAG_00262":null,"SJAG_00266":null,"SJAG_00268":null,"SJAG_00269":null,"SJAG_00290":null,"SJAG_00297":null,"SJAG_00302":null,"SJAG_00303":null,"SJAG_00317":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_00342":null,"SJAG_00354":null,"SJAG_00368":null,"SJAG_00379":null,"SJAG_00397":null,"SJAG_00441":null,"SJAG_00448":null,"SJAG_00453":null,"SJAG_00521":null,"SJAG_00545":null,"SJAG_00557":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00640":null,"SJAG_00641":null,"SJAG_00646":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_00700":null,"SJAG_00794":null,"SJAG_00800":null,"SJAG_00803":null,"SJAG_00804":null,"SJAG_00809":null,"SJAG_00822":null,"SJAG_00826":null,"SJAG_00831":null,"SJAG_00861":null,"SJAG_00899":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00943":null,"SJAG_01009":null,"SJAG_01022":null,"SJAG_01047":null,"SJAG_01068":null,"SJAG_01073":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01143":null,"SJAG_01157":null,"SJAG_01167":null,"SJAG_01178":null,"SJAG_01188":null,"SJAG_01193":null,"SJAG_01196":null,"SJAG_01199":null,"SJAG_01205":null,"SJAG_01249":null,"SJAG_01258":null,"SJAG_01263":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01377":null,"SJAG_01392":null,"SJAG_01403":null,"SJAG_01437":null,"SJAG_01456":null,"SJAG_01464":null,"SJAG_01475":null,"SJAG_01509":null,"SJAG_01564":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01605":null,"SJAG_01617":null,"SJAG_01638":null,"SJAG_01658":null,"SJAG_01686":null,"SJAG_01711":null,"SJAG_01713":null,"SJAG_01728":null,"SJAG_01738":null,"SJAG_01745":null,"SJAG_01748":null,"SJAG_01771":null,"SJAG_01772":null,"SJAG_01778":null,"SJAG_01783":null,"SJAG_01794":null,"SJAG_01804":null,"SJAG_01809":null,"SJAG_01873":null,"SJAG_01876":null,"SJAG_01916":null,"SJAG_01926":null,"SJAG_01952":null,"SJAG_02045":null,"SJAG_02066":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02097":null,"SJAG_02098":null,"SJAG_02103":null,"SJAG_02162":null,"SJAG_02165":null,"SJAG_02196":null,"SJAG_02204":null,"SJAG_02215":null,"SJAG_02240":null,"SJAG_02241":null,"SJAG_02246":null,"SJAG_02255":null,"SJAG_02329":null,"SJAG_02332":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02394":null,"SJAG_02398":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02453":null,"SJAG_02458":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02511":null,"SJAG_02513":null,"SJAG_02514":null,"SJAG_02541":null,"SJAG_02551":null,"SJAG_02586":null,"SJAG_02591":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02651":null,"SJAG_02671":null,"SJAG_02688":null,"SJAG_02699":null,"SJAG_02701":null,"SJAG_02737":null,"SJAG_02753":null,"SJAG_02773":null,"SJAG_02789":null,"SJAG_02795":null,"SJAG_02805":null,"SJAG_02822":null,"SJAG_02831":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02874":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03005":null,"SJAG_03023":null,"SJAG_03044":null,"SJAG_03081":null,"SJAG_03089":null,"SJAG_03103":null,"SJAG_03116":null,"SJAG_03123":null,"SJAG_03146":null,"SJAG_03170":null,"SJAG_03200":null,"SJAG_03211":null,"SJAG_03217":null,"SJAG_03218":null,"SJAG_03230":null,"SJAG_03264":null,"SJAG_03267":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03347":null,"SJAG_03377":null,"SJAG_03404":null,"SJAG_03416":null,"SJAG_03417":null,"SJAG_03435":null,"SJAG_03441":null,"SJAG_03449":null,"SJAG_03464":null,"SJAG_03465":null,"SJAG_03527":null,"SJAG_03535":null,"SJAG_03536":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03552":null,"SJAG_03564":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03596":null,"SJAG_03599":null,"SJAG_03602":null,"SJAG_03622":null,"SJAG_03625":null,"SJAG_03627":null,"SJAG_03628":null,"SJAG_03629":null,"SJAG_03643":null,"SJAG_03651":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03673":null,"SJAG_03681":null,"SJAG_03710":null,"SJAG_03726":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_03845":null,"SJAG_03848":null,"SJAG_03851":null,"SJAG_03867":null,"SJAG_03882":null,"SJAG_03905":null,"SJAG_03916":null,"SJAG_03920":null,"SJAG_03924":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03981":null,"SJAG_03989":null,"SJAG_04023":null,"SJAG_04035":null,"SJAG_04051":null,"SJAG_04076":null,"SJAG_04077":null,"SJAG_04099":null,"SJAG_04100":null,"SJAG_04142":null,"SJAG_04186":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04253":null,"SJAG_04259":null,"SJAG_04274":null,"SJAG_04315":null,"SJAG_04370":null,"SJAG_04381":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04455":null,"SJAG_04466":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04503":null,"SJAG_04508":null,"SJAG_04509":null,"SJAG_04513":null,"SJAG_04558":null,"SJAG_04565":null,"SJAG_04574":null,"SJAG_04601":null,"SJAG_04607":null,"SJAG_04609":null,"SJAG_04613":null,"SJAG_04621":null,"SJAG_04623":null,"SJAG_04640":null,"SJAG_04647":null,"SJAG_04666":null,"SJAG_04671":null,"SJAG_04690":null,"SJAG_04701":null,"SJAG_04705":null,"SJAG_04739":null,"SJAG_04755":null,"SJAG_04763":null,"SJAG_04768":null,"SJAG_04820":null,"SJAG_04821":null,"SJAG_04884":null,"SJAG_04886":null,"SJAG_04909":null,"SJAG_04921":null,"SJAG_04930":null,"SJAG_04931":null,"SJAG_04932":null,"SJAG_04942":null,"SJAG_04943":null,"SJAG_04959":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05011":null,"SJAG_05153":null,"SJAG_05179":null,"SJAG_05196":null,"SJAG_05203":null,"SJAG_05206":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05273":null,"SJAG_05286":null,"SJAG_05315":null,"SJAG_05341":null,"SJAG_05950":null,"SJAG_06382":null,"SJAG_06638":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090"],"is_obsolete":false,"name":"protein-macromolecule adaptor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:24184107":null},"synonyms":[{"name":"protein binding, bridging","type":"exact"},{"name":"protein complex scaffold activity","type":"broad"},{"name":"protein recruiting activity","type":"related"},{"name":"protein-containing complex scaffold activity","type":"broad"},{"name":"protein-protein adaptor","type":"narrow"}],"termid":"GO:0030674","terms_by_termid":{"GO:0003712":null,"GO:0003713":null,"GO:0003714":null,"GO:0005078":null,"GO:0005483":null,"GO:0005484":null,"GO:0008093":null,"GO:0030159":null,"GO:0030674":null,"GO:0035591":null,"GO:0035615":null,"GO:0043495":null,"GO:0061649":null,"GO:0062072":null,"GO:0062239":null,"GO:0106006":null,"GO:0106166":null,"GO:0140002":null,"GO:0140005":null,"GO:0140008":null,"GO:0140172":null,"GO:0140173":null,"GO:0140312":null,"GO:0140443":null,"GO:0140449":null,"GO:0140463":null,"GO:0140473":null,"GO:0140474":null,"GO:0140475":null,"GO:0140483":null,"GO:0140506":null,"GO:0140517":null,"GO:0140566":null,"GO:0140580":null,"GO:0140693":null,"GO:0140767":null,"GO:0160134":null,"GO:0160214":null,"GO:0180014":null,"GO:1990247":null,"GO:1990644":null,"GO:1990756":null,"GO:1990889":null}}


id: FYPO:0001336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects a transport process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"transport phenotype during vegetative growth","synonyms":[{"name":"fission yeast transport phenotype during vegetative growth","type":"exact"},{"name":"transport phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001336"}


id: GO:0010987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein particle clearance","termid":"GO:0010985"},{"relation_name":"negatively_regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of high-density lipoprotein particle clearance","termid":"GO:0010987"}


id: GO:2000865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estradiol secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estradiol secretion","termid":"GO:2000864"},{"relation_name":"negatively_regulates","term_name":"estradiol secretion","termid":"GO:0035938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of estradiol secretion","synonyms":[{"name":"negative regulation of oestradiol secretion","type":"exact"}],"termid":"GO:2000865"}


id: PBO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh2 (predicted)","termid":"PBO:0036292"}


id: GO:0046072
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP, deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTDP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dTDP metabolism","type":"exact"}],"termid":"GO:0046072","terms_by_termid":{"GO:0006233":null}}


id: PBO:0041223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 3","termid":"PBO:0041223"}


id: PBO:0052629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6C","termid":"PBO:0052629"}


id: PBO:0036240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 complex poly(A) binding protein Nab3 (predicted)","termid":"PBO:0036240"}


id: MONDO:0023193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedman Goodman syndrome","termid":"MONDO:0023193","xrefs":{"Monarch":{"xref_id":"0023193"}}}


id: PBO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 3, pseudogene","termid":"PBO:0050647"}


id: PBO:0070561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 27","termid":"PBO:0070561"}


id: PBO:0078201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-3","termid":"PBO:0078201"}


id: PBO:0060736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 1","termid":"PBO:0060736"}


id: FYPO:0004091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the microtubule cytoskeleton is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to microtubule cytoskeleton","synonyms":[{"name":"abolished protein localisation to microtubule cytoskeleton","type":"exact"},{"name":"protein localization to microtubule cytoskeleton abolished","type":"exact"}],"termid":"FYPO:0004091"}


id: MONDO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease affecting a single peripheral nerve of the upper limb.","direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuritis simplex","termid":"MONDO:0002121"},{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"upper limb mononeuronitis","secondary_identifiers":["DOID:1844","ICD9:354.9"],"synonyms":[{"name":"forelimb mononeuritis simplex","type":"exact"},{"name":"mononeuritis of upper limb","type":"exact"},{"name":"mononeuritis of upper limb, unspecified","type":"exact"},{"name":"mononeuritis simplex of forelimb","type":"exact"},{"name":"mononeuritis upper limb","type":"exact"}],"termid":"MONDO:0002130","xrefs":{"Monarch":{"xref_id":"0002130"}}}


id: GO:1904557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine transport","termid":"GO:0015808"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-alanine transmembrane transport","termid":"GO:1904557"}


id: MONDO:0700267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BARD1 gene. Germline pathogenic or likely pathogenic variants in the BARD1 gene confer a moderate risk of breast cancer, inherited in an autosomal dominant pattern, increasingly documented to be specific to triple negative breast cancer in women. BARD1 cancer susceptibility syndrome is also associated with other tumour types including neuroblastoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARD1-related cancer predisposition","termid":"MONDO:0700267","xrefs":{"Monarch":{"xref_id":"0700267"}}}


id: PBO:0061361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 21","termid":"PBO:0061361"}


id: FYPO:0006816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006816"}


id: MONDO:1012296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hymen, imperforate, non-human animal","termid":"MONDO:1010279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imperforate hymen, horse","secondary_identifiers":["OMIA:001107-9796"],"termid":"MONDO:1012296","xrefs":{"Monarch":{"xref_id":"1012296"}}}


id: FYPO:0003034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to ultraviolet light is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to UV","synonyms":[{"name":"decreased RNA accumulation during cellular response to ultraviolet light","type":"related"},{"name":"decreased RNA level during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to ultraviolet light","type":"exact"},{"name":"decreased transcript level during cellular response to UV","type":"exact"},{"name":"reduced RNA level during cellular response to UV","type":"exact"}],"termid":"FYPO:0003034"}


id: GO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a nucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte development","termid":"GO:0048821"},{"relation_name":"part_of","term_name":"nucleate erythrocyte differentiation","termid":"GO:0043363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte development","synonyms":[{"name":"nucleate RBC development","type":"exact"},{"name":"nucleate red blood cell development","type":"exact"}],"termid":"GO:0048823"}


id: PBO:0081182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type and G-patch domain containing","termid":"PBO:0081182"}


id: MONDO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of undescended testis","secondary_identifiers":["UMLS:C0153595","ICD9:186.0","MEDGEN:509335","SCTID:188219004","DOID:12276"],"synonyms":[{"name":"malignant neoplasm of retained testis","type":"exact"},{"name":"malignant neoplasm of undescended testis","type":"exact"},{"name":"malignant tumor of retained testis","type":"exact"},{"name":"malignant tumour of retained testis","type":"exact"}],"termid":"MONDO:0001480","xrefs":{"Monarch":{"xref_id":"0001480"}}}


id: MONDO:0012371
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88493],"is_not":false,"summary":null,"term":"MONDO:0012371"}]},"cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the KRAS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176931","DOID:0060581","OMIM:609942","GARD:9885","UMLS:C1860991","MESH:C537847","MEDGEN:349931"],"synonyms":[{"name":"KRAS Noonan syndrome","type":"exact"},{"name":"KRAS gene related Noonan syndrome","type":"exact"},{"name":"NS3","type":"exact"},{"name":"Noonan syndrome 3","type":"exact"},{"name":"Noonan syndrome caused by mutation in KRAS","type":"exact"},{"name":"Noonan syndrome type 3","type":"exact"}],"termid":"MONDO:0012371","terms_by_termid":{"MONDO:0012371":null},"xrefs":{"Monarch":{"xref_id":"0012371"}}}


id: MONDO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features. It may also arise in the urinary bladder, urethra, and vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villous adenoma","secondary_identifiers":["MESH:D018253","DOID:0050869","ICDO:8261/0","UMLS:C0206674","NCIT:C7399","MEDGEN:60206"],"synonyms":[{"name":"villous adenoma","type":"exact"}],"termid":"MONDO:0000502","xrefs":{"Monarch":{"xref_id":"0000502"}}}


id: PBO:0082709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic60p is also involved in import of intermembrane space (IMS) proteins, probably by positioning Mia40p relative to the TOM complex to receive incoming proteins; ortholog of mammalian mitofilin","termid":"PBO:0082709"}


id: MONDO:0011045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syndromic form of split-hand/foot malformation (SHFM). It is characterized by microcephaly, microphthalmia, ectrodactyly of the lower limbs and prognathism. Intellectual deficit has been reported. MMEP syndrome is considered to be a very rare condition, although the exact prevalence remains unknown. The etiology is not completely understood. Disruption of the sorting nexin 3 gene (SNX3; 6q21) has been shown to play a causative role in MMEP, although this was not confirmed in recent studies.","definition_xrefs":["Orphanet:3434"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MMEP syndrome","secondary_identifiers":["OMIM:601349","SCTID:715533002","MESH:C537686","UMLS:C1832440","GARD:3693","MEDGEN:330469","DOID:0111803"],"synonyms":[{"name":"MCOPS8","type":"exact"},{"name":"MMEP","type":"related"},{"name":"Viljoen Smart syndrome","type":"related"},{"name":"Viljoen-Smart syndrome","type":"exact"},{"name":"microcephaly microphthalmia ectrodactyly of lower limbs and prognathism","type":"related"},{"name":"microcephaly, microphthalmia, ectrodactyly of Lower limbs, and prognathism","type":"related"},{"name":"microcephaly-microphthalmia-ectrodactyly of lower limbs-prognathism syndrome","type":"exact"},{"name":"microphthalmia syndromic 8","type":"related"},{"name":"microphthalmia, syndromic 8","type":"related"},{"name":"syndromic microphthalmia type 8","type":"exact"}],"termid":"MONDO:0011045","xrefs":{"Monarch":{"xref_id":"0011045"}}}


id: GO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.","definition_xrefs":["PMID:33199372","GOC:BHF","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"transmembrane transporter binding","synonyms":[{"name":"ion channel binding","type":"narrow"}],"termid":"GO:0044325"}


id: PBO:0073435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b, subunit 4 pseudogene 1","termid":"PBO:0073435"}


id: GO:1902414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cell junction.","definition_xrefs":["GOC:TermGenie","PMID:18332111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell junction","synonyms":[{"name":"protein localisation in cell junction","type":"exact"},{"name":"protein localisation to cell junction","type":"exact"},{"name":"protein localization in cell junction","type":"exact"}],"termid":"GO:1902414"}


id: PBO:0030196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0030196"}


id: PR:Q9US54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.04c","synonyms":[{"name":"Spom972h-taf11","type":"exact"},{"name":"TBP-associated factor 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US54"}


id: PBO:0054620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2025","termid":"PBO:0054620"}


id: PBO:0028191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_pre-replicative_complex_assembly","termid":"PBO:0028191"}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["CHEBI:17310","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: PATO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete borderline intensity (obsolete PATO:0002528)","termid":"PATO:0002528"}


id: GO:0103016
data:
  {"annotated_genes":["SJAG_01302","SJAG_00358","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96165,107831,110396],"is_not":false,"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H+ + L-cysteinyl-[protein].","definition_xrefs":["RHEA:47032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140098","GO:0016782","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA-uridine 2-sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-2023","EC:2.8.1.13"],"synonyms":[{"name":"tRNA-specific 2-thiouridylase activity","type":"related"},{"name":"tRNA-uracil-34 sulfurtransferase activity","type":"related"}],"termid":"GO:0103016","terms_by_termid":{"GO:0103016":null}}


id: PR:O59811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 622 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13182:SF7","OMA:SCHPO04600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic 60S subunit biogenesis factor SPCC550.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.15c","secondary_identifiers":["UniProtKB:O59811"],"synonyms":[{"name":"Spom972h-ZNF622","type":"exact"},{"name":"pre-60S factor REI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59811"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["PMID:9530499","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0038023","GO:0004672","GO:0016740","GO:0003674","GO:0003824","GO:0016301","GO:0140096"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: PBO:0038856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 3","termid":"PBO:0038856"}


id: GO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transporter activity","termid":"GO:0089721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate:phosphate antiporter activity","synonyms":[{"name":"PPT","type":"broad"},{"name":"phosphoenolpyruvate/phosphate translocator","type":"exact"}],"termid":"GO:0015121"}


id: GO:0010845
data:
  {"annotated_genes":["SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90939],"is_not":false,"summary":null,"term":"GO:0010845"},{"annotations":[109946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0006259","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiotic recombination","type":"related"}],"termid":"GO:0010845","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: PBO:0077562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 269","termid":"PBO:0077562"}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: PBO:0086419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase activating protein (GAP) with a role in exocytosis; stimulates Gyp5p GAP activity on Ypt1p, colocalizes with Gyp5p at sites of polarized growth; interacts with Gyp5p, Rvs161p, and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; increases in abundance and relocalizes from bud neck to cytoplasm upon DNA replication stress; GYL1 has a paralog, GYP5, that arose from the whole genome duplication","termid":"PBO:0086419"}


id: PBO:0078643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-1","termid":"PBO:0078643"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: FYPO:0003164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclease activity is absent. All nuclease activities may be absent, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished nuclease activity","synonyms":[{"name":"nuclease activity abolished","type":"exact"}],"termid":"FYPO:0003164"}


id: GO:0019586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galacturonate, the anion of galacturonic acid, the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid metabolic process","termid":"GO:0006063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galacturonate metabolic process","synonyms":[{"name":"galacturonate metabolism","type":"exact"}],"termid":"GO:0019586"}


id: GO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing behavioral, developmental, or physiological response(s) from a responding organism or cell. The substance may be released or retained on the cell surface. Pheromones may serve as a specific attractant, social communicator, or sexual stimulant.","definition_xrefs":["ISBN:0198506732","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0098772","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pheromone activity","termid":"GO:0005186"}


id: GO:0120285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of tyrosine.","definition_xrefs":["PMID:31498992","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"tyrosine sensor activity","synonyms":[{"name":"tyrosine sensing activity","type":"exact"}],"termid":"GO:0120285"}


id: MONDO:0013538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-2-macroglobulin deficiency (obsolete MONDO:0013538)","secondary_identifiers":["MESH:C566304","OMIM:614036"],"synonyms":[{"name":"A2MD","type":"related"},{"name":"ALPHA-2-macroglobulin deficiency","type":"related"},{"name":"alpha-2-macroglobulin deficiency","type":"exact"}],"termid":"MONDO:0013538","xrefs":{"Monarch":{"xref_id":"0013538"}}}


id: MONDO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 5","secondary_identifiers":["GARD:18357","UMLS:C4539942","OMIM:617626","DOID:0080280","MEDGEN:1624392"],"synonyms":[{"name":"GGF5","type":"related"},{"name":"GINGF5","type":"related"},{"name":"fibromatosis, gingival, 5","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 5","type":"related"},{"name":"gingival fibromatosis 5","type":"related"}],"termid":"MONDO:0033493","xrefs":{"Monarch":{"xref_id":"0033493"}}}


id: GO:0075118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts the normal execution of a host G protein-coupled receptor signal transduction pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","secondary_identifiers":["GO:0075121","GO:0075124","GO:0075127"],"synonyms":[{"name":"modulation by symbiont of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"modulation by symbiont of host G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein alpha subunit","type":"narrow"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein beta subunit","type":"narrow"},{"name":"modulation by symbiont of host signal transduction mediated by G-protein gamma subunit","type":"narrow"},{"name":"perturbation of host G protein-coupled receptor signal transduction pathway","type":"exact"}],"termid":"GO:0075118"}


id: MONDO:0016391
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88252,88251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"Neonatal diabetes mellitus presents as hyperglycemia, failure to thrive and, in some cases, dehydration and ketoacidosis which may be severe with coma, in a child within the first months of life.","definition_xrefs":["Orphanet:224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic diabetes","termid":"MONDO:0015967"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"neonatal diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:49817004","UMLS:C0158981","MEDGEN:57645","ICD9:775.1","icd11.foundation:1217915084","NANDO:2200463","NCIT:C99248","MedDRA:10028933","ICD10CM:P70.2","DOID:11717","GARD:18682"],"synonyms":[{"name":"NDM","type":"exact"},{"name":"congenital diabetes mellitus","type":"exact"},{"name":"diabetes mellitus syndrome in newborn infant","type":"exact"}],"termid":"MONDO:0016391","terms_by_termid":{"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0016391"}}}


id: FYECO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited pantothenate","termid":"FYECO:0000189"}


id: GO:1905274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21068295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of postsynaptic structure","termid":"GO:0099159"},{"relation_name":"regulates","term_name":"modification of postsynaptic actin cytoskeleton","termid":"GO:0098885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"regulation of postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:1905274"}


id: PBO:0034290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_end_location","termid":"PBO:0034290"}


id: PBO:0051072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-24 (non-functional)","termid":"PBO:0051072"}


id: MONDO:0020683
data:
  {"annotated_genes":["SJAG_05979","SJAG_03786","SJAG_01748","SJAG_01059","SJAG_02763","SJAG_00358","SJAG_02520","SJAG_01013","SJAG_00640","SJAG_02896","SJAG_03453","SJAG_04622","SJAG_03905","SJAG_01349","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[87722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[87150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[89074,89231,89230,89075,89073,89076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012454"},{"annotations":[89132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011953"},{"annotations":[87364,87365,87363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013108"},{"annotations":[87963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032716"},{"annotations":[88915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009992"}]},"cv_name":"mondo","definition":"Disease having a short and relatively severe course.","definition_xrefs":["MESH:D000208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_00640":null,"SJAG_01013":null,"SJAG_01059":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02520":null,"SJAG_02763":null,"SJAG_02896":null,"SJAG_03081":null,"SJAG_03453":null,"SJAG_03786":null,"SJAG_03905":null,"SJAG_04622":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"acute disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0001314","MEDGEN:1738","ICD9:799.89","SCTID:2704003"],"synonyms":[{"name":"acute disease","type":"exact"},{"name":"acute diseases","type":"exact"},{"name":"disease, acute","type":"exact"}],"termid":"MONDO:0020683","terms_by_termid":{"MONDO:0008294":null,"MONDO:0009992":null,"MONDO:0011953":null,"MONDO:0012454":null,"MONDO:0013108":null,"MONDO:0013111":null,"MONDO:0014744":null,"MONDO:0018874":null,"MONDO:0032716":null},"xrefs":{"Monarch":{"xref_id":"0020683"}}}


id: PBO:0114213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protease Sdd3","termid":"PBO:0114213"}


id: PBO:0080593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 20","termid":"PBO:0080593"}


id: FYPO:0001684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to purvalanol A","synonyms":[{"name":"decreased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"decreased transcript level during cellular response to purvalanol A","type":"exact"},{"name":"reduced RNA level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001684"}


id: MOD:01313
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+9amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:63#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+9amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(9)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+9amu), N-term & K","type":"related"}],"termid":"MOD:01313"}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: PBO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B4","termid":"PBO:0050494"}


id: PBO:0029804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002433)","termid":"PBO:0029804"}


id: PBO:0039069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 1","termid":"PBO:0039069"}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: PBO:0031106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0031106"}


id: PBO:0076822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5A","termid":"PBO:0076822"}


id: FYPO:0001152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during nitrogen starvation","type":"related"},{"name":"decreased RNA level during nitrogen depletion","type":"exact"},{"name":"decreased RNA level during nitrogen deprivation","type":"exact"},{"name":"decreased transcript level during nitrogen starvation","type":"exact"},{"name":"reduced RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001152"}


id: GO:0120255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound biosynthetic process","synonyms":[{"name":"alkene substituted compound anabolic process","type":"exact"},{"name":"alkene substituted compound anabolism","type":"exact"},{"name":"alkene substituted compound biosynthesis","type":"exact"},{"name":"alkene substituted compound biosynthetic process","type":"exact"},{"name":"alkene substituted compound synthesis","type":"exact"}],"termid":"GO:0120255"}


id: PBO:0082697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore sub-complex COMA; COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) bridges kinetochore subunits in contact with centromeric DNA with subunits bound to microtubules during kinetochore assembly; involved in minichromosome maintenance; modified by sumoylation; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-O and fission yeast mal2","termid":"PBO:0082697"}


id: MONDO:0019005
data:
  {"annotated_genes":["SJAG_01896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"}]},"cv_name":"mondo","definition":"Progressive tubulointerstitial injury, inherited in an autosomal recessive pattern, caused by mutations in genes involved in ciliary function, which may result in an end stage renal failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0000090","NANDO:1201036","icd11.foundation:158151813","DOID:12712","NANDO:2100015","NANDO:2200140","OMIMPS:256100","Orphanet:655","UMLS:C0687120","NANDO:2200170","MEDGEN:146912","NCIT:C123200","GARD:206"],"synonyms":[{"name":"medullary cystic disease","type":"exact"},{"name":"medullary cystic kidney","type":"exact"},{"name":"nephronophthisis","type":"exact"},{"name":"nephronophthisis (disease)","type":"exact"}],"termid":"MONDO:0019005","terms_by_termid":{"MONDO:0013163":null},"xrefs":{"Monarch":{"xref_id":"0019005"}}}


id: PBO:0079057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 12-1","termid":"PBO:0079057"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_02074","SJAG_02607","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105270,112557,117044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0065003","GO:0006259","GO:0006260","GO:0044085"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: MONDO:0013108
data:
  {"annotated_genes":["SJAG_00640","SJAG_03081","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87363,87364,87365],"is_not":false,"summary":null,"term":"MONDO:0013108"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01013":null,"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphocytic, susceptibility to, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:442767","UMLS:C2751595","OMIM:613065"],"synonyms":[{"name":"ALL","type":"related"},{"name":"All1","type":"related"},{"name":"T-cell acute lymphoblastic leukemia, somatic","type":"exact"},{"name":"leukemia, B-cell acute lymphoblastic, susceptibility to","type":"related"},{"name":"leukemia, T-cell acute lymphoblastic, somatic","type":"exact"},{"name":"leukemia, T-cell acute lymphoblastic, susceptibility to","type":"related"},{"name":"leukemia, T-cell acute lymphocytic, somatic","type":"exact"},{"name":"leukemia, acute lymphoblastic","type":"related"},{"name":"leukemia, acute lymphoblastic, B-Hyperdiploid, susceptibility to","type":"related"},{"name":"leukemia, acute lymphoblastic, somatic","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 1","type":"related"},{"name":"leukemia, acute lymphocytic, Philadelphia chromosome positive, somatic","type":"exact"},{"name":"leukemia, acute lymphocytic, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0013108","terms_by_termid":{"MONDO:0013108":null},"xrefs":{"Monarch":{"xref_id":"0013108"}}}


id: MONDO:1011230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, goat","secondary_identifiers":["OMIA:000337-9925"],"termid":"MONDO:1011230","xrefs":{"Monarch":{"xref_id":"1011230"}}}


id: PBO:0086817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR415C is not an essential gene","termid":"PBO:0086817"}


id: MONDO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked agammaglobulinemia (XLA) is a clinically variable form of isolated agammaglobulinemia, an inherited immunodeficiency disorder, and is characterized in affected males by recurrent bacterial infections during infancy.","definition_xrefs":["Orphanet:47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated agammaglobulinemia","termid":"MONDO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Bruton-type agammaglobulinemia","secondary_identifiers":["OMIM:300755","DOID:14179","MedDRA:10060360","SCTID:65880007","UMLS:C0221026","NANDO:2200716","NANDO:1200343","GARD:1033","MESH:C537409","NCIT:C3822","MEDGEN:65123"],"synonyms":[{"name":"BTK deficiency","type":"exact"},{"name":"BTK-deficiency","type":"exact"},{"name":"Bruton agammaglobulinemia tyrosine kinase deficiency","type":"exact"},{"name":"Bruton type agammaglobulinemia","type":"exact"},{"name":"Bruton's Sex-linked agammaglobulinemia","type":"exact"},{"name":"Bruton's X-linked agammaglobulinemia","type":"exact"},{"name":"Bruton's agammaglobulinaemia","type":"exact"},{"name":"Bruton's agammaglobulinemia","type":"related"},{"name":"Bruton's type agammaglobulinemia","type":"exact"},{"name":"Bruton-type agammaglobulinemia","type":"exact"},{"name":"X-linked agammaglobulinemia","type":"exact"},{"name":"XLA","type":"related"},{"name":"agammaglobulinemia, BTK","type":"related"},{"name":"agammaglobulinemia, Bruton tyrosine kinase","type":"related"},{"name":"agammaglobulinemia, X-linked","type":"related"},{"name":"agammaglobulinemia, X-linked 1, X-linked recessive","type":"exact"},{"name":"agammaglobulinemia, X-linked, type 1","type":"related"},{"name":"hypogammaglobulinemia, X-linked","type":"related"},{"name":"immunodeficiency 1","type":"related"}],"termid":"MONDO:0010421","xrefs":{"Monarch":{"xref_id":"0010421"}}}


id: PBO:0026885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026885"}


id: MONDO:1012897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any heart disorder characterized by pathologically accelerated cardiac repolarization and increased ventricular tachycardia/fibrillation inducibility that occurs in rabbits due to a mutation in the KCNH2 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:30496390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short QT syndrome, KCNH2-related, rabbit","secondary_identifiers":["OMIA:002441-9986"],"termid":"MONDO:1012897","xrefs":{"Monarch":{"xref_id":"1012897"}}}


id: PBO:0004700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm6","termid":"PBO:0004700"}


id: MONDO:0034846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare intestinal disease characterized by congenital partial or complete lack of the collagen mesh network in the intestinal wall, resulting in hypoperistalsis or aperistalsis. The enteric nervous system is normal or near-normal in the affected areas, although hypo- and dysganglionosis may be found in some proximal segments of the colon and/or small bowel. Patients present with chronic intractable slow transit constipation.","definition_xrefs":["Orphanet:565641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"primary desmosis coli","secondary_identifiers":["GARD:22268","MEDGEN:1812159","UMLS:C5680125"],"termid":"MONDO:0034846","xrefs":{"Monarch":{"xref_id":"0034846"}}}


id: MONDO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of acinar structures composed of columnar or cuboidal cells. (NCI05)","definition_xrefs":["NCIT:C5649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar lung adenocarcinoma","secondary_identifiers":["MEDGEN:233130","DOID:6482","UMLS:C1332137"],"synonyms":[{"name":"acinar adenocarcinoma of lung","type":"exact"},{"name":"acinar adenocarcinoma of the lung","type":"exact"},{"name":"acinar lung adenocarcinoma","type":"exact"},{"name":"lung acinar adenocarcinoma","type":"related"}],"termid":"MONDO:0003892","xrefs":{"Monarch":{"xref_id":"0003892"}}}


id: PATO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perforate","secondary_identifiers":["PATO:0000649"],"synonyms":[{"name":"permeable","type":"related"},{"name":"pierced","type":"related"}],"termid":"PATO:0002112"}


id: GO:0008892
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80830],"is_not":false,"summary":null,"term":"GO:0008892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanine + H2O = xanthine + NH3.","definition_xrefs":["EC:3.5.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"guanine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GUANINE-DEAMINASE-RXN","Reactome:R-HSA-74255","RHEA:14665"],"synonyms":[{"name":"GAH activity","type":"related"},{"name":"guanase activity","type":"related"},{"name":"guanine aminase activity","type":"related"},{"name":"guanine aminohydrolase activity","type":"related"}],"termid":"GO:0008892","terms_by_termid":{"GO:0008892":null}}


id: PBO:0087102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17A has a paralog, RPS17B, that arose from the whole genome duplication","termid":"PBO:0087102"}


id: PBO:0051939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2A","termid":"PBO:0051939"}


id: PR:Q9P802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis18 gene.","definition_xrefs":["UniProtKB:Q9P802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.12","synonyms":[{"name":"Spom972h-mis18","type":"exact"}],"termid":"PR:Q9P802"}


id: GO:0008242
data:
  {"annotated_genes":["SJAG_01612","SJAG_03316"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75525,80356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.","definition_xrefs":["PMID:20157488","PMID:9920379","EC:3.4.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"omega peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peptidase activity, acting on peptides containing modified amino acids","type":"related"}],"termid":"GO:0008242","terms_by_termid":{"GO:0036374":null}}


id: FYPO:0006850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition, instead of the normal G1 phase, and after the cell undergoes one cell division instead of the normal two, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:9472077","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","termid":"FYPO:0001001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen depletion","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen deprivation","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase following single cell division during nitrogen starvation","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition following single cell division during nitrogen starvation","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition following single cell division during nitrogen starvation","type":"exact"},{"name":"mitotic G2 phase arrest following single cell division during nitrogen starvation","type":"exact"},{"name":"one cell division prior to cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006850"}


id: GO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the right horn of the sinus venosus from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right horn of sinus venosus development","termid":"GO:0061080"}


id: GO:0004865
data:
  {"annotated_genes":["SJAG_04999","SJAG_03309","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76376,77828,89720],"is_not":false,"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a serine/threonine protein phosphatase, an enzyme that catalyzes the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase inhibitor activity","termid":"GO:0004864"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03309":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0030234","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"protein serine/threonine phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004865","terms_by_termid":{"GO:0004865":null}}


id: GO:0106105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanyl-tRNA(Thr) + H2O = tRNA(Thr) + L-alanine + H+.","definition_xrefs":["PMID:29410408","RHEA:17793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"Ala-tRNA(Thr) deacylase activity","synonyms":[{"name":"L-alanyl-tRNA(Thr) deacylase","type":"exact"}],"termid":"GO:0106105"}


id: PBO:0050022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP alpha 3 (pseudogene)","termid":"PBO:0050022"}


id: GO:0030719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of polar granules, cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.","definition_xrefs":["PMID:770367","PMID:10851135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"P granule organization","secondary_identifiers":["GO:0048114"],"synonyms":[{"name":"P granule organization and biogenesis","type":"related"},{"name":"polar granule organisation","type":"exact"},{"name":"polar granule organization and biogenesis","type":"exact"}],"termid":"GO:0030719"}


id: MONDO:0018816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated neonatal sclerosing cholangitis is a rare, genetic, biliary tract disease characterized by severe neonatal-onset cholangiopathy with patent bile ducts and absence of ichthyosiform skin lesions. Patients present with jaundice, acholic stools, hepatosplenomegaly and high serum gamma-glutamyltransferase activity. Liver histology shows portal fibrosis, ductular proliferation, hepatocellular metallothionein deposits, and intralobular bile-pigment accumulations. Some patients may also have renal disease.","definition_xrefs":["Orphanet:480556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"isolated neonatal sclerosing cholangitis","secondary_identifiers":["OMIM:617394","UMLS:C4479344","GARD:21983","MEDGEN:1393230"],"synonyms":[{"name":"NSC","type":"related"},{"name":"sclerosing cholangitis, neonatal","type":"related"}],"termid":"MONDO:0018816","xrefs":{"Monarch":{"xref_id":"0018816"}}}


id: GO:0102280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline + NADP+ = betaine aldehyde + NADPH + H+.","definition_xrefs":["GOC:pz","PMID:21769646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline dehydrogenase activity","termid":"GO:0008812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"choline monooxygenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-12582"],"synonyms":[{"name":"choline monooxygenase activity (NADP-dependent)","type":"exact"}],"termid":"GO:0102280"}


id: PBO:0063958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 beta","termid":"PBO:0063958"}


id: GO:0033389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine via agmatine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine biosynthetic process from arginine","termid":"GO:0033388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine, via agmatine","synonyms":[{"name":"putrescine anabolism from arginine, using agmatinase","type":"exact"},{"name":"putrescine biosynthesis from arginine, using agmatinase","type":"exact"},{"name":"putrescine biosynthetic process from arginine, using agmatinase","type":"exact"},{"name":"putrescine formation from arginine, using agmatinase","type":"exact"},{"name":"putrescine synthesis from arginine, using agmatinase","type":"exact"}],"termid":"GO:0033389"}


id: FYPO:0001666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level","synonyms":[{"name":"normal cellular cAMP level","type":"exact"},{"name":"normal cyclic AMY level","type":"exact"}],"termid":"FYPO:0001666"}


