# terms

id: PBO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group PABLB member 1, envelope","termid":"PBO:0046615"}


id: MONDO:0020257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculomotor palsy that arises from lesions in the supranuclear pathways controlling extraocular movement.","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supranuclear oculomotor palsy","secondary_identifiers":["UMLS:C5681698","GARD:19546","MEDGEN:1842980","Orphanet:98687"],"synonyms":[{"name":"conjugate gaze palsy","type":"related"},{"name":"gaze palsy","type":"related"},{"name":"supranuclear disorder of eye movement","type":"related"},{"name":"supranuclear eye movement disorder","type":"exact"},{"name":"supranuclear ocular palsy","type":"related"}],"termid":"MONDO:0020257","xrefs":{"Monarch":{"xref_id":"0020257"}}}


id: PBO:0042162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 23","termid":"PBO:0042162"}


id: PBO:0030638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATPase_activity","termid":"PBO:0030638"}


id: GO:0106330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-9-O-acetylneuraminate = acetate + H+ + N-acetylneuraminate.","definition_xrefs":["PMID:22291594","RHEA:22600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialate O-acetylesterase activity","termid":"GO:0001681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sialate 9-O-acetylesterase activity","secondary_identifiers":["MetaCyc:RXN-13182"],"termid":"GO:0106330"}


id: MONDO:0010020
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86927],"is_not":false,"summary":null,"term":"MONDO:0010020"}]},"cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the BSCL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10212","UMLS:C1720863","OMIM:269700","MEDGEN:318593","DOID:0111136"],"synonyms":[{"name":"BSCL2 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"BSCL2 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"BSCL2-related Brunzell syndrome","type":"related"},{"name":"Berardinelli Seip congenital lipodystrophy type 2","type":"related"},{"name":"Berardinelli syndrome","type":"related"},{"name":"Berardinelli-Seip congenital lipodystrophy type 2","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 2","type":"related"},{"name":"Berardinelli-Seip syndrome","type":"exact"},{"name":"Brunzell syndrome BSCL2-related","type":"exact"},{"name":"Brunzell syndrome, BSCL2-related","type":"related"},{"name":"CGL2","type":"exact"},{"name":"Seip syndrome","type":"related"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in BSCL2","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in BSCL2","type":"exact"},{"name":"congenital lipoatrophic diabetes","type":"exact"},{"name":"lipoatrophic diabetes, congenital","type":"related"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 2","type":"related"},{"name":"lipodystrophy, congenital generalized, type 2","type":"related"},{"name":"lipodystrophy, total, and acromegaloid gigantism","type":"related"},{"name":"total lipodystrophy and acromegaloid gigantism","type":"exact"}],"termid":"MONDO:0010020","terms_by_termid":{"MONDO:0010020":null},"xrefs":{"Monarch":{"xref_id":"0010020"}}}


id: PBO:0028239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_meiotic_anaphase_II","termid":"PBO:0028239"}


id: GO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of elastin biosynthetic process (obsolete GO:0051545)","synonyms":[{"name":"down regulation of elastin biosynthetic process","type":"exact"},{"name":"down-regulation of elastin biosynthetic process","type":"exact"},{"name":"downregulation of elastin biosynthetic process","type":"exact"},{"name":"inhibition of elastin biosynthetic process","type":"narrow"}],"termid":"GO:0051545"}


id: PBO:0085984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; null mutant has decreased levels of cardiolipin and phosphatidylethanolamine; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085984"}


id: PBO:0030764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_copper_ion","termid":"PBO:0030764"}


id: PBO:0067330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 422, pseudogene","termid":"PBO:0067330"}


id: PBO:0043075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 4 subunit","termid":"PBO:0043075"}


id: MONDO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the roundworm Ascaris lumbricoides, many cases of which remain asymptomatic. During the transient larval migratory phase, shortness of breath, fever, and eosinophilia can occur. Depending on the intestinal worm burden, a spectrum of gastrointestinal tract symptoms can occur.","definition_xrefs":["NCIT:C128392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascariasis","secondary_identifiers":["UMLS:C0003950","CSP:1248-7284","DOID:456","MESH:D001196","ICD10CM:B77","icd11.foundation:17842540","MEDGEN:2087","ICD9:127.0","SCTID:2435008","EFO:0007154"],"synonyms":[{"name":"Ascaris lumbricoides caused disease or disorder","type":"exact"},{"name":"Ascaris lumbricoides disease or disorder","type":"exact"},{"name":"Ascaris lumbricoides infection","type":"related"},{"name":"Ascaris lumbricoides infectious disease","type":"exact"},{"name":"ascariasis - roundworm","type":"exact"}],"termid":"MONDO:0005654","xrefs":{"Monarch":{"xref_id":"0005654"}}}


id: PBO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11 (predicted)","termid":"PBO:0003217"}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: GO:0030474
data:
  {"annotated_genes":["SJAG_04003","SJAG_03200","SJAG_03544","SJAG_04558","SJAG_01760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109404,92009,114649,114852,117145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"}]},"cv_name":"biological_process","definition":"Construction of a new spindle pole body.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_04003":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"spindle pole body duplication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031046","GO:0007103"],"synonyms":[{"name":"spindle pole body assembly","type":"exact"},{"name":"spindle pole body biogenesis","type":"exact"},{"name":"spindle pole body biosynthesis","type":"exact"},{"name":"spindle pole body duplication associated with nuclear envelope","type":"exact"},{"name":"spindle pole body duplication in cytoplasm","type":"exact"},{"name":"spindle pole body formation","type":"exact"},{"name":"spindle pole body replication","type":"exact"}],"termid":"GO:0030474","terms_by_termid":{"GO:1903087":null}}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: PBO:0082674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the eisosome with unknown function; GFP-fusion protein localizes to the cytoplasm; specifically phosphorylated in vitro by mammalian diphosphoinositol pentakisphosphate (IP7)","termid":"PBO:0082674"}


id: PBO:0056541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence like","termid":"PBO:0056541"}


id: PBO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 1","termid":"PBO:0045724"}


id: GO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04352","PANTHER:PTHR12415:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: MONDO:0009979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reticular dystrophy of the retinal pigment epithelium is a patterned dystrophy of the retinal pigment epithelium, of progressive course, characterized by the presence of a bilateral hyperpigmented reticular pattern resembling a fishnet with knots, resulting in a slowly progressive loss of vision that often only becomes apparent in old age. Reticular dystrophy of the retinal pigment epithelium is sometimes associated with scleral staphyloma, choroidal neovascularization, convergent strabismus, spherophakia with myopia and luxated lenses, and partial atrophy of the iris.","definition_xrefs":["Orphanet:99002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"reticular dystrophy of the retinal pigment epithelium","secondary_identifiers":["ICD10CM:H35.5","OMIM:179840","UMLS:C1867332","MEDGEN:356753","MESH:C566721","SCTID:723502001","MESH:C564844","icd11.foundation:878593681","GARD:16891"],"synonyms":[{"name":"reticular dystrophy of retinal pigment epithelium","type":"exact"},{"name":"retinal dystrophy, reticular pigmentary, of POSTERIOR POLE","type":"related"}],"termid":"MONDO:0009979","xrefs":{"Monarch":{"xref_id":"0009979"}}}


id: GO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The guanylylation of peptidyl-lysine to form peptidyl-N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["RESID:AA0228"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine guanylylation (obsolete GO:0018261)","termid":"GO:0018261"}


id: GO:0008443
data:
  {"annotated_genes":["SJAG_02596","SJAG_03336","SJAG_00039","SJAG_02713","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76782,80602,75123,82071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003873"},{"annotations":[79618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to a phosphofructose substrate molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00605":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphofructokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008443","terms_by_termid":{"GO:0003872":null,"GO:0003873":null}}


id: GO:0097690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an iron ion transmembrane transporter.","definition_xrefs":["PMID:15514116","GOC:kom","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter inhibitor activity","termid":"GO:0141110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"iron ion transmembrane transporter inhibitor activity","synonyms":[{"name":"iron channel inhibitor activity","type":"exact"}],"termid":"GO:0097690"}


id: MONDO:0006159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal stromal tumor that arises from the colon or rectum. The majority of cases have spindle cell morphology. Gastrointestinal stromal tumors of the colon are usually advanced upon detection and tend to have a poor prognosis; gastrointestinal stromal tumors of the rectum usually have an aggressive clinical course.","definition_xrefs":["NCIT:C27735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal gastrointestinal stromal tumor","secondary_identifiers":["EFO:1000192","MEDGEN:272496","UMLS:C1333109"],"synonyms":[{"name":"colorectal (colon or rectal) gastrointestinal stromal tumor (gist)","type":"exact"},{"name":"colorectal (colon or rectal) gastrointestinal stromal tumour (gist)","type":"exact"},{"name":"colorectal gastrointestinal stromal tumor","type":"exact"},{"name":"colorectal gastrointestinal stromal tumor (gist)","type":"exact"},{"name":"colorectal gastrointestinal stromal tumour (gist)","type":"exact"},{"name":"colorectal gist","type":"exact"}],"termid":"MONDO:0006159","xrefs":{"Monarch":{"xref_id":"0006159"}}}


id: GO:1900148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:TermGenie","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell migration","synonyms":[{"name":"down regulation of Schwann cell migration","type":"exact"},{"name":"down-regulation of Schwann cell migration","type":"exact"},{"name":"downregulation of Schwann cell migration","type":"exact"},{"name":"inhibition of Schwann cell migration","type":"narrow"}],"termid":"GO:1900148"}


id: PBO:0038416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_negative_effect","termid":"PBO:0038416"}


id: FYPO:0000335
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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id: PBO:0116620
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id: MONDO:0100053
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id: PBO:0064626
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id: PBO:0116198
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id: PBO:0072799
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id: GO:0045437
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id: GO:1903696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a horsetail-astral microtubule array.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:11907273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cortical microtubule cytoskeleton","termid":"GO:0072699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to horsetail-astral microtubule array","synonyms":[{"name":"protein localisation in horsetail-astral microtubule array","type":"exact"},{"name":"protein localisation to horsetail-astral microtubule array","type":"exact"},{"name":"protein localization in horsetail-astral microtubule array","type":"exact"}],"termid":"GO:1903696"}


id: GO:1901617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic hydroxy compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound biosynthetic process (obsolete GO:1901617)","synonyms":[{"name":"organic hydroxy compound anabolism","type":"exact"},{"name":"organic hydroxy compound biosynthesis","type":"exact"},{"name":"organic hydroxy compound formation","type":"exact"},{"name":"organic hydroxy compound synthesis","type":"exact"}],"termid":"GO:1901617"}


id: GO:0090508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylethylamine biosynthetic process","termid":"GO:0042444"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process involved in synaptic transmission","termid":"GO:0090507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phenylethylamine biosynthetic process involved in synaptic transmission","termid":"GO:0090508"}


id: PBO:0063186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase","termid":"PBO:0063186"}


id: GO:1990773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of matrix metallopeptidases, a family of zinc-dependent endopeptidases that can degrade extracellular matrix proteins and process other types of proteins.","definition_xrefs":["PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"matrix metallopeptidase secretion","synonyms":[{"name":"MMP secretion","type":"exact"},{"name":"matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1990773"}


id: GO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of a series of septin structures that are localized in the bud neck of a budding fungal cell during the cell cycle.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin structure","termid":"GO:0000399"}


id: MONDO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive nodal or extranodal mature (peripheral) T-cell lymphomas that do not belong to the better defined entities of the remainder of mature T-cell lymphomas. This category includes the following variants: lymphoepithelioid cell variant (Lennert's lymphoma), follicular variant, and T-zone variant.","definition_xrefs":["NCIT:C4340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"neoplasm of mature T-cells or NK-cells","termid":"MONDO:0005169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"peripheral T-cell lymphoma, not otherwise specified","secondary_identifiers":["icd11.foundation:855224800","ONCOTREE:PTCL","EFO:0000211","NANDO:2200028"],"synonyms":[{"name":"PTCL","type":"related"},{"name":"peripheral T-cell lymphoma, not otherwise specified","type":"exact"}],"termid":"MONDO:0004964","xrefs":{"Monarch":{"xref_id":"0004964"}}}


id: MONDO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypobetalipoproteinemia (obsolete MONDO:0001826)","termid":"MONDO:0001826","xrefs":{"Monarch":{"xref_id":"0001826"}}}


id: GO:0031682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein gamma subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"G-protein gamma-subunit binding","synonyms":[{"name":"G-gamma protein subunit binding","type":"exact"}],"termid":"GO:0031682"}


id: PBO:0031777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endocytosis_during_vegetative_growth","termid":"PBO:0031777"}


id: PBO:0087485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cohesin loading factor (Scc2p-Scc4p); a complex required for loading of cohesin complexes onto chromosomes; involved in establishing sister chromatid cohesion during DSB repair via histone H2AX; promotes gene expression program that supports translational fidelity; evolutionarily-conserved adherin; relocalizes to cytosol in response to hypoxia; human disorder Cornelia de Lange syndrome is caused by mutations in NIPBL, the human ortholog of SCC2; conserved role in NHEJ","termid":"PBO:0087485"}


id: PBO:0057951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3674","termid":"PBO:0057951"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PR:O13750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11117:SF3","PRO:DNx","OMA:SCHPO01475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.17c","secondary_identifiers":["UniProtKB:O13750"],"synonyms":[{"name":"SCS-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SUCLG1","type":"exact"},{"name":"succinyl-CoA synthetase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13750"}


id: PBO:0082596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class I histone deacetylase (HDAC) family member; deacetylates Smc3p on lysine residues at anaphase onset; has sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; interacts with the Tup1p-Ssn6p corepressor complex","termid":"PBO:0082596"}


id: SO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding methionyl tRNA (SO:0000266).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine_tRNA_primary_transcript","synonyms":[{"name":"methionine tRNA primary transcript","type":"exact"}],"termid":"SO:0000223"}


id: GO:0098693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synaptic vesicle cycle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"}


id: PBO:0066893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 193","termid":"PBO:0066893"}


id: PBO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 3 (predicted)","termid":"PBO:0000350"}


id: MONDO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that arises from the laryngeal epithelium. More than 90% of laryngeal carcinomas are squamous cell carcinomas. The remainder are adenoid cystic carcinomas, mucoepidermoid carcinomas and carcinomas with neuroendocrine differentiation.","definition_xrefs":["NCIT:C4855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal carcinoma","secondary_identifiers":["DOID:2600","SCTID:276975007","UMLS:C0595989","MEDGEN:108889"],"synonyms":[{"name":"cancer of larynx","type":"broad"},{"name":"cancer of the larynx","type":"broad"},{"name":"carcinoma of larynx","type":"exact"},{"name":"carcinoma of the larynx","type":"exact"},{"name":"laryngeal cancer","type":"broad"},{"name":"laryngeal carcinoma","type":"exact"},{"name":"laryngeal throat cancer","type":"broad"},{"name":"larynx carcinoma","type":"exact"}],"termid":"MONDO:0002358","xrefs":{"Monarch":{"xref_id":"0002358"}}}


id: MONDO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the small intestine. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of small intestine","termid":"MONDO:0021501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestine leiomyoma","secondary_identifiers":["MEDGEN:68660","NCIT:C7725","SCTID:424279009","DOID:1738","UMLS:C0238197"],"synonyms":[{"name":"leiomyoma of small bowel","type":"exact"},{"name":"leiomyoma of small intestine","type":"exact"},{"name":"leiomyoma of the small bowel","type":"exact"},{"name":"leiomyoma of the small intestine","type":"exact"},{"name":"leiomyoma, small bowel","type":"exact"},{"name":"leiomyoma, small intestine","type":"exact"},{"name":"small bowel leiomyoma","type":"exact"},{"name":"small intestinal leiomyoma","type":"exact"},{"name":"small intestine leiomyoma","type":"exact"}],"termid":"MONDO:0002092","xrefs":{"Monarch":{"xref_id":"0002092"}}}


id: PBO:0066431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG intronic transcript 1","termid":"PBO:0066431"}


id: GO:0034884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-N-formylaminovinylacetaldehyde + H2O = gamma-N-formylaminovinylacetate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1349"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-N-formylaminovinylacetaldehyde dehydrogenase activity (obsolete GO:0034884)","synonyms":[{"name":"gamma-N-formylaminovinylacetaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0034884"}


id: MONDO:0017518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of toes","termid":"MONDO:0017452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of toes, bilateral","secondary_identifiers":["UMLS:C5229808","MEDGEN:1702894","icd11.foundation:357312922","Orphanet:295134"],"synonyms":[{"name":"short toes, bilateral","type":"exact"}],"termid":"MONDO:0017518","xrefs":{"Monarch":{"xref_id":"0017518"}}}


id: FYPO:0004434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide. Cells stop growing (and may die) at a concentration of 4-amino-1-methyl-1H-imidazole-5-carboselenoamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:18204818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","synonyms":[{"name":"hypersensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","type":"exact"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during vegetative growth","type":"exact"}],"termid":"FYPO:0004434"}


id: MONDO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, pagnamenta type","secondary_identifiers":["MEDGEN:1794240","OMIM:619638","UMLS:C5562030"],"synonyms":[{"name":"SMDP","type":"exact"}],"termid":"MONDO:0030487","xrefs":{"Monarch":{"xref_id":"0030487"}}}


id: PBO:0083663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) resident protein; required for ER exit of the high-affinity phosphate transporter Pho84p, specifically required for packaging of Pho84p into COPII vesicles; protein abundance increases in response to DNA replication stress","termid":"PBO:0083663"}


id: MONDO:0007293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type I (LAD-I) is a form of LAD characterized by life-threatening, recurrent bacterial infections.","definition_xrefs":["Orphanet:99842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 1","secondary_identifiers":["MEDGEN:98310","GARD:6893","SCTID:234582006","UMLS:C0398738","MESH:C535887","NCIT:C4689","OMIM:116920","DOID:0110910"],"synonyms":[{"name":"ITGB2 leukocyte adhesion deficiency","type":"exact"},{"name":"LAD-I","type":"exact"},{"name":"LAD1","type":"exact"},{"name":"LFA 1 immunodeficiency","type":"related"},{"name":"LFA-I deficiency","type":"exact"},{"name":"LFA1 immunodeficiency","type":"exact"},{"name":"Lad1","type":"related"},{"name":"Lfa1 immunodeficiency","type":"related"},{"name":"lad","type":"related"},{"name":"lad 1","type":"related"},{"name":"lad-I","type":"exact"},{"name":"lad-type I","type":"exact"},{"name":"leukocyte adhesion deficiency","type":"broad"},{"name":"leukocyte adhesion deficiency 1","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in ITGB2","type":"exact"},{"name":"leukocyte adhesion deficiency type 1","type":"exact"},{"name":"leukocyte adhesion deficiency type I","type":"exact"},{"name":"leukocyte adhesion deficiency, type 1","type":"related"},{"name":"leukocyte adhesion deficiency, type I","type":"related"},{"name":"lymphocyte function-associated antigen 1 immunodeficiency","type":"exact"}],"termid":"MONDO:0007293","xrefs":{"Monarch":{"xref_id":"0007293"}}}


id: MONDO:0007323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chondronectin","secondary_identifiers":["UMLS:C3887693","MEDGEN:854532","OMIM:118670"],"synonyms":[{"name":"Chondronectin","type":"exact"}],"termid":"MONDO:0007323","xrefs":{"Monarch":{"xref_id":"0007323"}}}


id: SO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trans_splicing_acceptor_site which appends the 22nt SL2 RNA leader sequence to the 5' end of mRNAs. SL2 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_acceptor_site","termid":"SO:0000706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL2_acceptor_site","synonyms":[{"name":"SL2 acceptor site","type":"exact"}],"termid":"SO:0000709"}


id: PBO:0077838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPBGL antisense RNA 1","termid":"PBO:0077838"}


id: GO:0004030
data:
  {"annotated_genes":["SJAG_03786","SJAG_00482","SJAG_02961"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"},{"annotations":[80396,77825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aldehyde dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696080","Reactome:R-HSA-5692283","MetaCyc:ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN","Reactome:R-HSA-6808464"],"synonyms":[{"name":"ALDH","type":"related"},{"name":"aldehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0004030","terms_by_termid":{"GO:0004029":null,"GO:0140087":null}}


id: MONDO:0007827
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87104,87103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","definition":"A slowly progressive degenerative inflammatory disorder of skeletal muscles characterized by late onset weakness of specific muscles and distinctive histopathological features.","definition_xrefs":["Orphanet:611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myositis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3896","MESH:D018979","UMLS:C0238190","NCIT:C84786","NANDO:1200218","OMIM:147421","ICD9:729.1","DOID:3429","SCTID:72315009","ICD9:359.71","MedDRA:10066407","EFO:0007323","NANDO:1200032","NORD:1734","MEDGEN:68659"],"synonyms":[{"name":"IBM","type":"exact"},{"name":"Ibm","type":"related"},{"name":"Sporadic Inclusion Body Myositis","type":"exact"},{"name":"inclusion body myositis","type":"exact"},{"name":"inflammatory myopathy","type":"related"},{"name":"sIBM","type":"exact"},{"name":"sporadic inclusion body myositis","type":"exact"}],"termid":"MONDO:0007827","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0007827"}}}


id: PBO:0076031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 31","termid":"PBO:0076031"}


id: FYPO:0004507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation does not occur at the centromeric regions. The remainder of the sister chromatids may or may not separate.","definition_xrefs":["PMID:18362178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished centromeric DNA separation","synonyms":[{"name":"abolished DNA separation at centromere","type":"exact"},{"name":"abolished centromeric DNA separation during mitosis","type":"exact"},{"name":"abolished centromeric DNA separation during mitotic cell cycle","type":"related"},{"name":"abolished centromeric DNA separation during vegetative growth","type":"exact"},{"name":"abolished mitotic centromeric DNA separation","type":"exact"},{"name":"abolished mitotic sister chromatid separation at centromere","type":"exact"},{"name":"abolished segregation of centromeric DNA","type":"related"},{"name":"abolished sister kinetochore separation","type":"related"}],"termid":"FYPO:0004507"}


id: GO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule metabolic process (obsolete GO:0044260)","synonyms":[{"name":"cellular biopolymer metabolic process","type":"exact"},{"name":"cellular macromolecule metabolism","type":"exact"}],"termid":"GO:0044260"}


id: PBO:0084508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific transcription factor; required for exit from pachytene and for full meiotic recombination; activates middle sporulation genes; competes with Sum1p for binding to promoters containing middle sporulation elements (MSE)","termid":"PBO:0084508"}


id: GO:0019418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate.","definition_xrefs":["MetaCyc:Sulfide-Oxidation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation","synonyms":[{"name":"sulphide oxidation","type":"exact"}],"termid":"GO:0019418"}


id: GO:0006663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether lipid biosynthetic process","termid":"GO:0008611"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"platelet activating factor biosynthetic process","synonyms":[{"name":"PAF biosynthesis","type":"exact"},{"name":"PAF biosynthetic process","type":"exact"},{"name":"platelet activating factor anabolism","type":"exact"},{"name":"platelet activating factor biosynthesis","type":"exact"},{"name":"platelet activating factor formation","type":"exact"},{"name":"platelet activating factor synthesis","type":"exact"}],"termid":"GO:0006663"}


id: PBO:0065131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKG2 antisense RNA 1","termid":"PBO:0065131"}


id: PBO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5","termid":"PBO:0045210"}


id: PBO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 5","termid":"PBO:0045326"}


id: GO:1901482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A L-lysine import into the vacuole that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane import into vacuole","termid":"GO:0090517"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-lysine import into vacuole involved in cellular response to nitrogen starvation","termid":"GO:1901482"}


id: PBO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 9","termid":"PBO:0048736"}


id: MONDO:0957307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"woolly hair-skin fragility syndrome","secondary_identifiers":["OMIM:620415","UMLS:C1843292","MEDGEN:375148"],"termid":"MONDO:0957307","xrefs":{"Monarch":{"xref_id":"0957307"}}}


id: MONDO:0022821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital benign spinal muscular atrophy dominant","termid":"MONDO:0022821","xrefs":{"Monarch":{"xref_id":"0022821"}}}


id: MONDO:0032934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genitourinary and/or brain malformation syndrome","secondary_identifiers":["MEDGEN:1720440","OMIM:618820","UMLS:C5394158"],"synonyms":[{"name":"GENITOURINARY AND/OR BRAIN MALFORMATION SYNDROME","type":"related"},{"name":"GUB syndrome","type":"exact"},{"name":"GUBS","type":"related"},{"name":"UBM syndrome","type":"exact"},{"name":"UBMS","type":"exact"},{"name":"Urogenital and/or brain malformation syndrome","type":"exact"},{"name":"genitourinary and/or brain malformation syndrome","type":"exact"},{"name":"genitourinary and/or/brain malformation syndrome","type":"exact"}],"termid":"MONDO:0032934","xrefs":{"Monarch":{"xref_id":"0032934"}}}


id: PR:000027576
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Phos(T3)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"hht1/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht1/Phos(T3)","type":"exact"}],"termid":"PR:000027576"}


id: PBO:0028666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028666"}


id: PBO:0053612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 648","termid":"PBO:0053612"}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: PBO:0066501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin family member 2","termid":"PBO:0066501"}


id: PBO:0072240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 15","termid":"PBO:0072240"}


id: MONDO:0003587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm arising from adipocytes, that occurs in children. The tumor maybe one of several histologic types including well-differentiated, dedifferentiated, myxoid/round cell, and pleomorphic liposarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric liposarcoma","secondary_identifiers":["UMLS:C0279984","DOID:5695","NANDO:2200065","NCIT:C8091","MEDGEN:83580"],"synonyms":[{"name":"childhood liposarcoma","type":"exact"},{"name":"liposarcoma","type":"broad"},{"name":"pediatric liposarcoma","type":"exact"}],"termid":"MONDO:0003587","xrefs":{"Monarch":{"xref_id":"0003587"}}}


id: MONDO:0012593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brain-lung-thyroid syndrome is a rare disorder characterized by congenital hypothyroidism (CH), infant respiratory distress syndrome (IRDS) and benign hereditary chorea (BHC).","definition_xrefs":["Orphanet:209905"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain-lung-thyroid syndrome","secondary_identifiers":["SCTID:719098007","MEDGEN:369694","GARD:12163","UMLS:C1970269","MESH:C567034","icd11.foundation:809856670","OMIM:610978"],"synonyms":[{"name":"BLT syndrome","type":"related"},{"name":"CAHTP","type":"related"},{"name":"brain-lung-thyroid syndrome","type":"exact"},{"name":"choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","type":"related"},{"name":"choreoathetosis, hypothyroidism, and neonatal respiratory distress","type":"exact"},{"name":"choreoathetosis-hypothyroidism-neonatal respiratory distress","type":"related"},{"name":"choreoathetosis-hypothyroidism-neonatal respiratory distress syndrome","type":"exact"}],"termid":"MONDO:0012593","xrefs":{"Monarch":{"xref_id":"0012593"}}}


id: PBO:0087400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift","termid":"PBO:0087400"}


id: SO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Conserved_region"],"synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:conserved_region","type":"exact"},{"name":"conserved region","type":"exact"}],"termid":"SO:0000330"}


id: SO:1000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet changes the stop codon, causing an elongated transcript sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000063 sequence_variant_causing_terminator_codon_change_in_transcript (obsolete SO:1000063)","synonyms":[{"name":"mutation causing terminator codon change in transcript","type":"related"},{"name":"sequence variant causing terminator codon change in transcript","type":"exact"}],"termid":"SO:1000063"}


id: GO:0052857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-NADPHX = (S)-NADPHX.","definition_xrefs":["PMID:21994945"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPHX epimerase activity (obsolete GO:0052857)","secondary_identifiers":["Reactome:R-HSA-6806966"],"termid":"GO:0052857"}


id: PBO:0050844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of Bruton tyrosine kinase pseudogene 1","termid":"PBO:0050844"}


id: MONDO:0006135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of cervical adenocarcinoma composed of clear and hobnail cells. It is associated with in utero exposure to diethylstilbestrol (DES).","definition_xrefs":["NCIT:C6344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical clear cell adenocarcinoma","secondary_identifiers":["EFO:1000163","UMLS:C1332912","DOID:5303","MEDGEN:234113","ONCOTREE:CECC"],"synonyms":[{"name":"cervical clear cell adenocarcinoma","type":"exact"},{"name":"cervical clear cell carcinoma","type":"exact"},{"name":"cervix clear cell adenocarcinoma","type":"exact"},{"name":"cervix clear cell carcinoma","type":"exact"},{"name":"cervix uteri clear cell adenocarcinoma","type":"exact"},{"name":"cervix uteri clear cell carcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of cervix","type":"exact"},{"name":"clear cell adenocarcinoma of cervix uteri","type":"exact"},{"name":"clear cell adenocarcinoma of the cervix","type":"exact"},{"name":"clear cell adenocarcinoma of the cervix uteri","type":"exact"},{"name":"clear cell adenocarcinoma of the uterine cervix","type":"exact"},{"name":"clear cell adenocarcinoma of uterine cervix","type":"exact"},{"name":"clear cell carcinoma of cervix","type":"exact"},{"name":"clear cell carcinoma of cervix uteri","type":"exact"},{"name":"clear cell carcinoma of the cervix","type":"exact"},{"name":"clear cell carcinoma of the cervix uteri","type":"exact"},{"name":"clear cell carcinoma of the uterine cervix","type":"exact"},{"name":"clear cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix clear cell adenocarcinoma","type":"exact"},{"name":"uterine cervix clear cell carcinoma","type":"exact"}],"termid":"MONDO:0006135","xrefs":{"Monarch":{"xref_id":"0006135"}}}


id: GO:1903552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GOC:TermGenie","PMID:24105262","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of extracellular exosome assembly","termid":"GO:1903551"},{"relation_name":"negatively_regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular exosome assembly","synonyms":[{"name":"down regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"downregulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"inhibition of extracellular vesicular exosome assembly","type":"narrow"},{"name":"negative regulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903552"}


id: MONDO:0700009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 2 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 disorder","termid":"MONDO:0700009","xrefs":{"Monarch":{"xref_id":"0700009"}}}


id: MONDO:0011013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant hypocalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypocalcemia","termid":"MONDO:0018543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia 1","secondary_identifiers":["MEDGEN:87438","UMLS:C0342345","DOID:0090107","OMIM:601198"],"synonyms":[{"name":"CASR autosomal dominant hypocalcemia","type":"exact"},{"name":"HYPOC1","type":"exact"},{"name":"autosomal dominant hypocalcemia caused by mutation in CASR","type":"exact"},{"name":"autosomal dominant hypocalcemia type 1","type":"exact"},{"name":"hypercalciuric hypocalcemia","type":"related"},{"name":"hypocalcemia, autosomal dominant","type":"broad"},{"name":"hypocalcemia, autosomal dominant 1","type":"related"},{"name":"hypocalcemia, autosomal dominant 1, with Bartter syndrome","type":"related"},{"name":"hypocalcemia, autosomal dominant type 1","type":"exact"},{"name":"hypocalcemia, autosomal dominant, with Bartter syndrome","type":"exact"},{"name":"hypocalcemia, familial","type":"related"}],"termid":"MONDO:0011013","xrefs":{"Monarch":{"xref_id":"0011013"}}}


id: GO:1901627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane organization","termid":"GO:1901626"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of postsynaptic membrane organization","synonyms":[{"name":"down regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down regulation of postsynaptic membrane organization","type":"exact"},{"name":"down-regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down-regulation of postsynaptic membrane organization","type":"exact"},{"name":"downregulation of postsynaptic membrane organisation","type":"exact"},{"name":"downregulation of postsynaptic membrane organization","type":"exact"},{"name":"inhibition of postsynaptic membrane organisation","type":"narrow"},{"name":"inhibition of postsynaptic membrane organization","type":"narrow"},{"name":"negative regulation of post-synaptic membrane organization","type":"exact"},{"name":"negative regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901627"}


id: GO:0019568
data:
  {"annotated_genes":["SJAG_03958","SJAG_02010","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96929,97663,103123],"is_not":false,"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"arabinose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose breakdown","type":"exact"},{"name":"arabinose catabolism","type":"exact"},{"name":"arabinose degradation","type":"exact"}],"termid":"GO:0019568","terms_by_termid":{"GO:0019568":null}}


id: PBO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 pseudogene 1","termid":"PBO:0048170"}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: GO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2R)-3-phosphoglycerate + 2 H+ = CO2 + D-ribulose 1,5-bisphosphate + H2O.","definition_xrefs":["RHEA:23124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ribulose-bisphosphate carboxylase activity","secondary_identifiers":["EC:4.1.1.39","MetaCyc:RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN"],"synonyms":[{"name":"D-ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"D-ribulose-1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"RuBP carboxylase activity","type":"exact"},{"name":"RuBisCO activity","type":"exact"},{"name":"carboxydismutase activity","type":"related"},{"name":"diphosphoribulose carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase/oxygenase activity","type":"exact"}],"termid":"GO:0016984"}


id: MONDO:0006588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nonepidermolytic palmoplantar keratoderma (obsolete MONDO:0006588)","termid":"MONDO:0006588","xrefs":{"Monarch":{"xref_id":"0006588"}}}


id: MONDO:1011908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic mononephrosis, non-human animal","secondary_identifiers":["OMIA:000808"],"termid":"MONDO:1011908","xrefs":{"Monarch":{"xref_id":"1011908"}}}


id: GO:0102086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: vanillate + L-glutamate(1-) + ATP = H+ + N-vanillate-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-vanillate-L-glutamate synthetase activity (obsolete GO:0102086)","termid":"GO:0102086"}


id: PBO:0039800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiregulin","termid":"PBO:0039800"}


id: FYPO:0000934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abolished protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"protein absent from microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"protein localization to microtubule cytoskeleton abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000934"}


id: MONDO:0006984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intracranial or rarely intraspinal suppurative process invading the space between the inner surface of the dura mater and the outer surface of the arachnoid.","definition_xrefs":["MESH:D013354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"empyema","termid":"MONDO:0005242"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subdural empyema","secondary_identifiers":["UMLS:C0038539","EFO:1001196","DOID:11389","MedDRA:10042360","MEDGEN:52531","SCTID:37660004"],"synonyms":[{"name":"subdural abscess","type":"exact"}],"termid":"MONDO:0006984","xrefs":{"Monarch":{"xref_id":"0006984"}}}


id: GO:0030240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in skeletal muscle.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"skeletal myofibril assembly","termid":"GO:0014866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"skeletal muscle thin filament assembly","termid":"GO:0030240"}


id: PBO:0045031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2 pseudogene 1","termid":"PBO:0045031"}


id: GO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["RHEA:10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethylglycine N-methyltransferase activity","secondary_identifiers":["EC:2.1.1.161","MetaCyc:RXN-9680","KEGG_REACTION:R07244"],"synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"related"}],"termid":"GO:0052729"}


id: GO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric nephron over time, from its formation to the mature structure. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["XAO:00002785","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron development","termid":"GO:0039019"}


id: GO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyroid-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thyroid-stimulating hormone receptor activity","secondary_identifiers":["Wikipedia:Thyrotropin_receptor"],"synonyms":[{"name":"TSH receptor activity","type":"exact"},{"name":"thyroid stimulating hormone receptor activity","type":"exact"},{"name":"thyrotropin receptor","type":"exact"}],"termid":"GO:0004996"}


id: FYPO:0007695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA strand exchange inhibitor activity","synonyms":[{"name":"normal RecA-family recombinase inhibitor activity","type":"exact"},{"name":"normal negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007695"}


id: PBO:0014290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRE9 family cell wall 1,6-beta-glucan biosynthesis protein (predicted)","termid":"PBO:0014290"}


id: PBO:0002826
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates pss1","termid":"PBO:0002826"}


id: FYPO:0007533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks colocalize normally (i.e. indistinguishably from wild type) with nuclear pore complexes (NPCs). Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PMID:33159083","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork processing","termid":"FYPO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000293","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal replication fork colocalization with nuclear pore complex","synonyms":[{"name":"normal replication fork colocalization with NPC","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"normal replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"}],"termid":"FYPO:0007533"}


id: MONDO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal disorder characterized by chronic inflammation involving all layers of the intestinal wall, noncaseating granulomas affecting the intestinal wall and regional lymph nodes, and transmural fibrosis. Crohn disease most commonly involves the terminal ileum; the colon is the second most common site of involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"Crohn disease","secondary_identifiers":["DOID:8778","UMLS:C0010346","EFO:0000384","ICD9:555.1","NANDO:1200444","Orphanet:206","SCTID:34000006","SCTID:7620006","MEDGEN:3664","NANDO:2200921","NCIT:C2965","icd11.foundation:1267652425","MESH:D003424","NANDO:1200446"],"synonyms":[{"name":"Crohn disease","type":"exact"},{"name":"Crohn's disease","type":"exact"},{"name":"Crohn's disease of colon","type":"exact"},{"name":"Crohn's disease of large bowel","type":"exact"},{"name":"granulomatous colitis","type":"exact"},{"name":"paediatric Crohn's disease","type":"exact"},{"name":"pediatric Crohn's disease","type":"exact"},{"name":"regional enteritis","type":"exact"}],"termid":"MONDO:0005011","xrefs":{"Monarch":{"xref_id":"0005011"}}}


id: GO:0018613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-fluorenone + 2 NADPH + O2 = 2 NADP+ + 3,4-dihydroxy-3,4-dihydro-9-fluorenone.","definition_xrefs":["UM-BBD_reactionID:r0409"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-fluorenone dioxygenase activity (obsolete GO:0018613)","termid":"GO:0018613"}


id: GO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.","definition_xrefs":["PMID:19056682","GOC:dph","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (obsolete GO:0061350)","termid":"GO:0061350"}


id: GO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the mucosal-associated lymphoid tissue (MALT).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosal tolerance induction","termid":"GO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in mucosal-associated lymphoid tissue","synonyms":[{"name":"tolerance induction in MALT","type":"exact"}],"termid":"GO:0002401"}


id: GO:0102985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of a cis double bond at position 12 of fatty-acyl-CoAs that contain a cis double bond at position 9. Specific reactions include: (9Z)-hexadecenoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (9Z,12Z)-hexadecadienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O; and (9Z)-hexadecenoyl-CoA + 2 Fe(II)-[cytochrome b5] + O2 + 2 H(+) = (9Z,12Z)-hexadecadienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["EC:1.14.19.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA (9+3)-desaturase activity","synonyms":[{"name":"delta12-fatty-acid desaturase activity","type":"exact"}],"termid":"GO:0102985"}


id: MONDO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"non-infectious diarrheal disease","secondary_identifiers":["MEDGEN:540680","UMLS:C0267436","SCTID:69980003"],"synonyms":[{"name":"non-infective diarrhea","type":"exact"},{"name":"non-infective diarrhoea","type":"exact"},{"name":"presumed non-infectious diarrhea","type":"related"},{"name":"presumed non-infectious diarrhoea","type":"related"}],"termid":"MONDO:0045030","xrefs":{"Monarch":{"xref_id":"0045030"}}}


id: SO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon whereby at least one base is part of a codon (here, 'codon' is inclusive of the stop_codon).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_exon","synonyms":[{"name":"coding exon","type":"exact"}],"termid":"SO:0000195"}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: PBO:0030266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ethidium_bromide","termid":"PBO:0030266"}


id: GO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: PBO:0087896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; component of the heteromeric Ino2p/Ino4p basic helix-loop-helix transcription activator that binds inositol/choline-responsive elements (ICREs), required for derepression of phospholipid biosynthetic genes in response to inositol depletion; involved in diauxic shift","termid":"PBO:0087896"}


id: MONDO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of familial hypoaldosteronism characterized by early infantile onset of vomiting, diarrhea, severe dehydration, and failure to thrive. Analysis of plasma electrolytes shows hyponatremia, hyperkalemia, and acidosis. Plasma renin activity is elevated, and aldosterone levels are low.","definition_xrefs":["Orphanet:556030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset familial hypoaldosteronism","secondary_identifiers":["ICD10CM:E27.4","MEDGEN:1842560","UMLS:C5680171","GARD:22243"],"synonyms":[{"name":"Early-onset familial hyperreninemic hypoaldosteronism","type":"exact"},{"name":"Severe aldosterone synthase deficiency","type":"exact"}],"termid":"MONDO:0035320","xrefs":{"Monarch":{"xref_id":"0035320"}}}


id: GO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms, occurring within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23460907","PMID:25713147"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction of symbiont in host (obsolete GO:0061887)","termid":"GO:0061887"}


id: FYPO:0003786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0003744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to centromere central core during vegetative growth","secondary_identifiers":["FYPO:0003765"],"synonyms":[{"name":"abolished protein localisation to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"protein localization to centromere central core abolished during vegetative growth","type":"exact"},{"name":"protein localization to chromatin at centromere central core abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003786"}


id: PBO:0061878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 2","termid":"PBO:0061878"}


id: PBO:0027682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_conjugation","termid":"PBO:0027682"}


id: PBO:0084872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; mitochondrially-encoded; polymorphic in different strains due to variation in number of AAT (asparagine) codons; translated near the mitochondrial inner membrane; may have a role in loss of mitochondrial DNA under stress conditions","termid":"PBO:0084872"}


id: GO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol.","definition_xrefs":["EC:3.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"fatty-acyl-ethyl-ester synthase activity","secondary_identifiers":["RHEA:16641","MetaCyc:FATTY-ACYL-ETHYL-ESTER-SYNTHASE-RXN"],"synonyms":[{"name":"FAEE synthase activity","type":"related"},{"name":"FAEES activity","type":"related"},{"name":"fatty-acyl ethyl ester synthase","type":"exact"},{"name":"long-chain-fatty-acyl-ethyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0030339"}


id: MONDO:0011665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Lennox-Gastaut syndrome (obsolete MONDO:0011665)","termid":"MONDO:0011665","xrefs":{"Monarch":{"xref_id":"0011665"}}}


id: MONDO:0006277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphangiomyomatosis involving the lungs and local lymph nodes. Patients usually present with chylous pleural effusion. The clinical course is variable. Patients with resectable lesions usually have a favorable clinical outcome. Patients with diffuse lesions usually have a progressive clinical course.","definition_xrefs":["NCIT:C38153"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung carcinoma","termid":"MONDO:0005138"},{"relation_name":"is_a","term_name":"lymphangioleiomyomatosis","termid":"MONDO:0011705"},{"relation_name":"is_a","term_name":"lung PEComa","termid":"MONDO:0020588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung lymphangioleiomyomatosis","secondary_identifiers":["ONCOTREE:LAM","ICD9:518.89","Orphanet:538","UMLS:C0349649","SCTID:277844007","EFO:1000334","GARD:3319","MEDGEN:91161","DOID:3319","MedDRA:10049459"],"synonyms":[{"name":"Lymphangioleiomyomatosis","type":"broad"},{"name":"lung lymphangioleiomyomatosis","type":"exact"},{"name":"lung lymphangiomyomatosis","type":"exact"},{"name":"lymphangioleiomyomatosis","type":"broad"},{"name":"pulmonary lymphangioleiomyomatosis","type":"exact"},{"name":"pulmonary lymphangiomyomatosis","type":"related"}],"termid":"MONDO:0006277","xrefs":{"Monarch":{"xref_id":"0006277"}}}


id: MOD:00356
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(4a-FMN)-L-cysteine.","definition_xrefs":["PubMed:12846567","Unimod:443#C","PubMed:12668455","PubMed:7692961","RESID:AA0351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(4a-FMN)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(4a-riboflavin 5'-dihydrogen phosphate)sulfanylpropanoic acid","type":"exact"},{"name":"4a-(S-cysteinyl)FMN","type":"exact"},{"name":"4a-(S-cysteinyl)flavin mononucleotide","type":"exact"},{"name":"FMNC","type":"related"},{"name":"MOD_RES S-4a-FMN cysteine","type":"exact"},{"name":"S-(4a-FMN)","type":"related"},{"name":"S-(4a-FMN)-L-cysteine","type":"exact"},{"name":"S4aFMNCys","type":"exact"}],"termid":"MOD:00356"}


id: PBO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein (predicted)","termid":"PBO:0003900"}


id: GO:1905461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:26493107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell apoptotic process","termid":"GO:0034393"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"activation of VSMC apoptosis","type":"narrow"},{"name":"activation of VSMC apoptotic process","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"positive regulation of VSMC apoptosis","type":"narrow"},{"name":"positive regulation of VSMC apoptotic process","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of VSMC apoptosis","type":"narrow"},{"name":"up regulation of VSMC apoptotic process","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of VSMC apoptosis","type":"narrow"},{"name":"up-regulation of VSMC apoptotic process","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of VSMC apoptosis","type":"narrow"},{"name":"upregulation of VSMC apoptotic process","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905461"}


id: PBO:0058789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7158","termid":"PBO:0058789"}


id: MONDO:0003565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the urethra, which is morphologically characterized by the presence of a villous architectural pattern.","definition_xrefs":["NCIT:C39872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"urethra neoplasm","termid":"MONDO:0021239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral villous adenoma","secondary_identifiers":["UMLS:C1519828","DOID:5643","MEDGEN:274360"],"synonyms":[{"name":"urethra villous adenoma","type":"exact"},{"name":"urethral villous adenoma","type":"exact"}],"termid":"MONDO:0003565","xrefs":{"Monarch":{"xref_id":"0003565"}}}


id: PBO:0082152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adapter protein for pexophagy and the Cvt targeting pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the PAS; recruits Dnm1p to facilitate fission of mitochondria that are destined for removal by mitophagy","termid":"PBO:0082152"}


id: GO:0009990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition involving the deposition of specific pathways in the extracellular matrix that guide migrating cells.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix recognition","termid":"GO:0009989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact guidance","termid":"GO:0009990"}


id: GO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte from the bone marrow to the blood stream.","definition_xrefs":["GOC:BHF","CL:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte migration into blood stream","synonyms":[{"name":"release of monocytes into circulation","type":"exact"}],"termid":"GO:0035703"}


id: GO:0048814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite morphogenesis","termid":"GO:0048814"}


id: PBO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 2","termid":"PBO:0047069"}


id: FYPO:0001432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethidium bromide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to ethidium bromide","synonyms":[{"name":"resistance to EtBr","type":"exact"},{"name":"resistance to ethidium bromide during mitotic cell cycle","type":"related"},{"name":"resistance to ethidium bromide during vegetative growth","type":"exact"},{"name":"resistant to ethidium bromide","type":"exact"}],"termid":"FYPO:0001432"}


id: PBO:0057686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1275","termid":"PBO:0057686"}


id: PBO:0027911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027911"}


id: GO:0098551
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the lumen.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of endosome membrane","termid":"GO:0098565"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"lumenal side of late endosome membrane","synonyms":[{"name":"internal leaflet of late endosome membrane","type":"exact"},{"name":"internal side of late endosome membrane","type":"exact"}],"termid":"GO:0098551"}


id: GO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an adenylyl group (adenosine 5'-monophosphate; AMP) to a protein amino acid.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:sart","PMID:21607083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein adenylylation","secondary_identifiers":["GO:0018176"],"synonyms":[{"name":"protein AMPylation","type":"exact"},{"name":"protein adenylation","type":"exact"},{"name":"protein amino acid adenylylation","type":"exact"}],"termid":"GO:0018117"}


id: PBO:0051741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 8","termid":"PBO:0051741"}


id: PBO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2 (predicted)","termid":"PBO:0003362"}


id: MONDO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular keratitis","secondary_identifiers":["UMLS:C0155076","icd11.foundation:1283506871","MEDGEN:509772","SCTID:2853006","DOID:11871","ICD9:370.22"],"termid":"MONDO:0001395","xrefs":{"Monarch":{"xref_id":"0001395"}}}


id: PR:O14360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex non-core subunit NAF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex non-core subunit NAF1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.15","secondary_identifiers":["UniProtKB:O14360"],"synonyms":[{"name":"Spom972h-NAF1","type":"exact"},{"name":"nuclear assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14360"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: PBO:0071779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 7","termid":"PBO:0071779"}


id: PBO:0085176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase; catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynthesis; component of a mitochondrial ubiquinone-synthesizing complex; phosphoprotein","termid":"PBO:0085176"}


id: GO:0060748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The branching process in which the mammary gland ducts form tertiary branches off of the secondary branches as part of diestrus and pregnancy.","definition_xrefs":["GOC:dph","PMID:18614704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"mammary gland branching involved in pregnancy","termid":"GO:0060745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tertiary branching involved in mammary gland duct morphogenesis","termid":"GO:0060748"}


id: GO:2001206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of osteoclast differentiation","termid":"GO:0045672"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"positively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast development","synonyms":[{"name":"positive regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001206"}


id: GO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD+ = 4-formylbenzenesulfonate + H+ + NADH.","definition_xrefs":["EC:1.1.1.257","RHEA:24412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-(hydroxymethyl)benzenesulfonate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0291","MetaCyc:SOLDEHYD-RXN","KEGG_REACTION:R05271"],"synonyms":[{"name":"4-(hydroxymethyl)benzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-(hydroxymethyl)benzenesulphonate dehydrogenase activity","type":"exact"},{"name":"4-sulfobenzyl alcohol dehydrogenase activity","type":"exact"}],"termid":"GO:0018462"}


id: PR:O43076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SHQ1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12967:SF0","PRO:DNx","OMA:SCHPO02840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein shq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.13","secondary_identifiers":["UniProtKB:O43076"],"synonyms":[{"name":"Spom972h-SHQ1","type":"exact"}],"termid":"PR:O43076"}


id: PBO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UREG (predicted)","termid":"PBO:0005343"}


id: PBO:0116979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL3 antisense RNA 1","termid":"PBO:0116979"}


id: GO:0099148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle docking.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"regulates","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle docking","termid":"GO:0099148"}


id: FYPO:0003338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring morphology","synonyms":[{"name":"abnormal actomyosin contractile ring morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring morphology during vegetative growth","type":"exact"},{"name":"abnormal contractile ring morphology","type":"exact"},{"name":"abnormal cytokinetic contractile ring morphology","type":"exact"},{"name":"abnormal mitotic contractile ring morphology","type":"exact"}],"termid":"FYPO:0003338"}


id: GO:1902282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a ventricular cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:8528244","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1902282"}


id: PBO:0066331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN3 antisense RNA","termid":"PBO:0066331"}


id: PBO:0068467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 44, pseudogene","termid":"PBO:0068467"}


id: MONDO:0018600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital abducens nerve palsy","secondary_identifiers":["Orphanet:440233","GARD:21837","MEDGEN:724505","UMLS:C1302994"],"synonyms":[{"name":"benign congenital sixth cranial nerve palsy","type":"exact"},{"name":"congenital CNVI palsy","type":"exact"}],"termid":"MONDO:0018600","xrefs":{"Monarch":{"xref_id":"0018600"}}}


id: PBO:0070815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 45","termid":"PBO:0070815"}


id: PBO:0068102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 409","termid":"PBO:0068102"}


id: GO:0016436
data:
  {"annotated_genes":["SJAG_03773","SJAG_03332","SJAG_00722","SJAG_03008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77461,80513,77706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[81390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyluridine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03008":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA (uridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016436","terms_by_termid":{"GO:0008650":null,"GO:0070042":null}}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: PBO:0083104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p","termid":"PBO:0083104"}


id: PBO:0068093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 400","termid":"PBO:0068093"}


id: GO:0072500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to stop, prevent, or reduce the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0072500)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0072500"}


id: PBO:0079821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 3","termid":"PBO:0079821"}


id: FYPO:0005239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular tyrosine level","synonyms":[{"name":"increased cellular L-tyrosine level","type":"exact"},{"name":"increased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"increased tyrosine accumulation","type":"related"}],"termid":"FYPO:0005239"}


id: MONDO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A narrowing of the carotid artery lumen. It is usually caused by the formation of an atherosclerotic plaque. Symptoms are usually present when there is severe narrowing or obstruction of the arterial lumen and manifest as ischemic cerebrovascular accidents.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid stenosis","secondary_identifiers":["HP:0100546","ICD9:433.10","DOID:13001","UMLS:C0007282","MESH:D016893","MEDGEN:785","NCIT:C95804","SCTID:64586002"],"synonyms":[{"name":"carotid artery stenosis","type":"exact"},{"name":"stenosis, carotid artery","type":"exact"}],"termid":"MONDO:0001612","xrefs":{"Monarch":{"xref_id":"0001612"}}}


id: SO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the coding regions of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_CDS","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Seattleseq:coding-notMod3","type":"exact"},{"name":"Seattleseq:coding-unknown","type":"exact"}],"termid":"SO:0002081"}


id: PBO:0029501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_abnormal_germ_tube_morphology_(obsolete_FYPO:0002214)","termid":"PBO:0029501"}


id: MONDO:0018526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete serous cystadenocarcinoma of pancreas (obsolete MONDO:0018526)","termid":"MONDO:0018526","xrefs":{"Monarch":{"xref_id":"0018526"}}}


id: GO:0006239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates dCMP, deoxycytidine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide salvage","termid":"GO:0010139"},{"relation_name":"is_a","term_name":"dCMP biosynthetic process","termid":"GO:0046064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCMP salvage","synonyms":[{"name":"deoxycytidine monophosphate salvage","type":"exact"}],"termid":"GO:0006239"}


id: GO:0010932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage tolerance induction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage tolerance induction","termid":"GO:0010932"}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: MONDO:0018222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked intellectual disability due to GRIA3 anomalies (obsolete MONDO:0018222)","secondary_identifiers":["Orphanet:364028"],"termid":"MONDO:0018222","xrefs":{"Monarch":{"xref_id":"0018222"}}}


id: PBO:0075559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG7 matrix AAA peptidase subunit, paraplegin","termid":"PBO:0075559"}


id: PBO:0034038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_plasma_membrane_part","termid":"PBO:0034038"}


id: GO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cellular protein complex assembly that results in the formation of a voltage-gated calcium channel complex.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"voltage-gated calcium channel complex assembly","termid":"GO:0070978"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: MONDO:1011347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-Covid-19 disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-viral disorder, non-human animal","termid":"MONDO:1011349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-COVID-19 disorder, non-human animal","termid":"MONDO:1011347","xrefs":{"Monarch":{"xref_id":"1011347"}}}


id: PBO:0087342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermidine synthase; involved in biosynthesis of spermidine and also in biosynthesis of pantothenic acid; spermidine is required for growth of wild-type cells","termid":"PBO:0087342"}


id: PBO:0054459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1856","termid":"PBO:0054459"}


id: GO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formamide + H2O = formate + NH4.","definition_xrefs":["RHEA:21948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidase activity","termid":"GO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formamidase activity","secondary_identifiers":["KEGG_REACTION:R00524","MetaCyc:FORMAMIDASE-RXN","UM-BBD_reactionID:r0873","EC:3.5.1.49","GO:0034566"],"synonyms":[{"name":"formamide amidohydrolase activity","type":"related"},{"name":"formamide hydrolase activity","type":"exact"}],"termid":"GO:0004328"}


id: PBO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 20","termid":"PBO:0071479"}


id: MONDO:0011453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulnar ray dysgenesis with postaxial polydactyly and renal cystic dysplasia","secondary_identifiers":["MEDGEN:346903","OMIM:604380","UMLS:C1858422","MESH:C565783"],"synonyms":[{"name":"ulnar ray dysgenesis with postaxial polydactyly and renal cystic dysplasia","type":"exact"}],"termid":"MONDO:0011453","xrefs":{"Monarch":{"xref_id":"0011453"}}}


id: PBO:0054128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1494","termid":"PBO:0054128"}


id: GO:0043882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: malate(out) + Na+(out) = malate(in) + Na+(in).","definition_xrefs":["GOC:jl","PMID:10903309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"malate:sodium symporter activity","secondary_identifiers":["RHEA:72295"],"synonyms":[{"name":"Na(+)-malate symporter activity","type":"exact"},{"name":"Na+:malate symporter activity","type":"exact"},{"name":"malate Na(+) symporter activity","type":"exact"},{"name":"malate-sodium symporter activity","type":"exact"},{"name":"malate/sodium cotransporter activity","type":"broad"},{"name":"malate/sodium symporter activity","type":"exact"},{"name":"malate:Na+ symporter activity","type":"exact"},{"name":"malate:sodium cotransporter activity","type":"broad"},{"name":"sodium-dependent malate transporter","type":"broad"},{"name":"sodium/malate symporter activity","type":"exact"},{"name":"sodium:malate symporter activity","type":"exact"}],"termid":"GO:0043882"}


id: GO:1901742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-deoxystreptamine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-deoxystreptamine metabolic process","synonyms":[{"name":"2-deoxystreptamine metabolism","type":"exact"}],"termid":"GO:1901742"}


id: MONDO:0014352
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88248],"is_not":false,"summary":null,"term":"MONDO:0014352"}]},"cv_name":"mondo","definition":"Any metabolic syndrome in which the cause of the disease is a mutation in the DYRK1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"abdominal obesity-metabolic syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014361","MEDGEN:862798","OMIM:615812","DOID:0060612"],"synonyms":[{"name":"AOMS3","type":"related"},{"name":"DYRK1B metabolic syndrome","type":"exact"},{"name":"abdominal obesity-metabolic syndrome 3","type":"exact"},{"name":"abdominal obesity-metabolic syndrome type 3","type":"exact"},{"name":"central obesity, type 2 diabetes, hypertension, and early-onset coronary artery disease","type":"related"},{"name":"metabolic syndrome caused by mutation in DYRK1B","type":"exact"}],"termid":"MONDO:0014352","terms_by_termid":{"MONDO:0014352":null},"xrefs":{"Monarch":{"xref_id":"0014352"}}}


id: FYPO:0009083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to lithium chloride and MMS","type":"exact"},{"name":"resistance to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and MMS in combination","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to lithium chloride and MMS","type":"exact"},{"name":"resistant to lithium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009083"}


id: PBO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 3","termid":"PBO:0060659"}


id: PBO:0062633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily I member 1 pseudogene","termid":"PBO:0062633"}


id: GO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an cytidine-uridine dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine-uridine insertion","synonyms":[{"name":"RNA CU insertion","type":"exact"}],"termid":"GO:0070712"}


id: PBO:0067952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 254","termid":"PBO:0067952"}


id: GO:0071474
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94294],"is_not":false,"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular HOG response","type":"exact"},{"name":"cellular hypertonic response","type":"exact"},{"name":"cellular response to hypertonicity","type":"exact"}],"termid":"GO:0071474","terms_by_termid":{"GO:0071474":null}}


id: GO:0047448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydro-4-deoxy-D-glucarate + H+ = 2,5-dioxopentanoate + CO2 + H2O.","definition_xrefs":["EC:4.2.1.41","RHEA:24608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-dehydro-4-deoxyglucarate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02279","MetaCyc:4.2.1.41-RXN"],"synonyms":[{"name":"5-dehydro-4-deoxy-D-glucarate hydro-lyase (decarboxylating)","type":"related"},{"name":"5-dehydro-4-deoxy-D-glucarate hydro-lyase (decarboxylating; 2,5-dioxopentanoate-forming)","type":"related"},{"name":"5-keto-4-deoxy-glucarate dehydratase activity","type":"related"},{"name":"D-4-deoxy-5-ketoglucarate hydro-lyase activity","type":"related"},{"name":"deoxyketoglucarate dehydratase activity","type":"related"}],"termid":"GO:0047448"}


id: PBO:0090082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd2","termid":"PBO:0090082"}


id: MONDO:0008244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Piebaldism is a rare congenital pigmentation skin disorder characterized by the presence of hypopigmented and depigmented skin areas (leukoderma) on various parts of the body, preferentially on the forehead, chest, abdomen, upper arms, and lower extremities, that are associated with a white forelock (poliosis), and in some cases with hypopigmented and depigmented eyebrows and eyelashes.","definition_xrefs":["Orphanet:2884"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes pigmentation anomaly (obsolete MONDO:0020191)","termid":"MONDO:0020191"},{"relation_name":"excluded_subClassOf","term_name":"albinism","termid":"MONDO:0043209"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"piebaldism","secondary_identifiers":["GARD:4344","ICD10CM:E70.3","NCIT:C85009","MEDGEN:36361","MESH:D016116","UMLS:C0080024","DOID:3263","OMIM:172800","SCTID:6479008","ICD9:270.2","icd11.foundation:2089421143"],"synonyms":[{"name":"PBT","type":"related"},{"name":"partial albinism","type":"exact"},{"name":"piebald trait","type":"exact"},{"name":"piebaldism","type":"exact"}],"termid":"MONDO:0008244","xrefs":{"Monarch":{"xref_id":"0008244"}}}


id: GO:2000492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000492"}


id: PATO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound frequency in the range of 20 to 20.000 Hz.","direct_ancestors":[{"relation_name":"is_a","term_name":"sound frequency","termid":"PATO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonic","termid":"PATO:0001525"}


id: PBO:0065689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 3","termid":"PBO:0065689"}


id: MONDO:0033614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 83, autosomal recessive","secondary_identifiers":["Orphanet:631076","DOID:0112346","MEDGEN:1759445","OMIM:619027","UMLS:C5436637"],"synonyms":[{"name":"SPG83","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 83","type":"exact"}],"termid":"MONDO:0033614","xrefs":{"Monarch":{"xref_id":"0033614"}}}


id: GO:0102424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (+)-sesaminol 2-O-beta-D-gentiobioside + UDP-alpha-D-glucose = (+)-sesaminol 2-O-beta-D-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sesaminol-2-O-gentiobioside 1,6-glucosyltransferase activity (obsolete GO:0102424)","termid":"GO:0102424"}


id: RO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"},{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_in_by","termid":"RO:0002625"}


id: FYECO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydroxyurea was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ HU","synonyms":[{"name":"hydroxyurea added","type":"exact"}],"termid":"FYECO:0000170"}


id: GO:0034216
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102617],"is_not":false,"summary":null,"term":"GO:0034216"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: thiamine(out) + H+(out) = thiamine(in) + H+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine:proton symporter activity","termid":"GO:0034215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity thiamine:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:proton symporter activity","type":"exact"},{"name":"high-affinity thiamine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0034216","terms_by_termid":{"GO:0034216":null}}


id: PBO:0045868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 1","termid":"PBO:0045868"}


id: GO:0021773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a medium spiny neuron residing in the striatum.","definition_xrefs":["GOC:jid","GOC:dgh","ISBN:0878937420","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatal medium spiny neuron differentiation","synonyms":[{"name":"medium-sized spiny neuron differentiation","type":"exact"},{"name":"striatal MSN differentiation","type":"exact"}],"termid":"GO:0021773"}


id: PBO:0069334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 593, pseudogene","termid":"PBO:0069334"}


id: GO:0061871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast migration","termid":"GO:0010764"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell migration","termid":"GO:0061871"}


id: PBO:0085743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering","termid":"PBO:0085743"}


id: MONDO:0014786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any IgA glomerulonephritis in which the cause of the disease is a mutation in the SPRY2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA nephropathy, susceptibility to","termid":"MONDO:0100555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA nephropathy, susceptibility to, 3","secondary_identifiers":["UMLS:C4225194","MEDGEN:897340","OMIM:616818"],"synonyms":[{"name":"IGAN3","type":"exact"},{"name":"IgA glomerulonephritis caused by mutation in SPRY2","type":"exact"},{"name":"IgA nephropathy, susceptibility to, 3","type":"exact"},{"name":"IgA nephropathy, susceptibility to, 3; IGAN3","type":"exact"},{"name":"IgA nephropathy, susceptibility to, type 3","type":"exact"},{"name":"SPRY2 IgA glomerulonephritis","type":"exact"},{"name":"susceptibility to IgA nephropathy 3","type":"related"}],"termid":"MONDO:0014786","xrefs":{"Monarch":{"xref_id":"0014786"}}}


id: PBO:0067420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 538, pseudogene","termid":"PBO:0067420"}


id: PR:P87056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A10.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain-containing protein C57A10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.08c","synonyms":[{"name":"Spom972h-SPAC57A10.08c","type":"exact"}],"termid":"PR:P87056"}


id: GO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the host cell mitochondrial envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell mitochondrial envelope","termid":"GO:0044190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial intermembrane space","termid":"GO:0072492"}


id: GO:0018452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-exo-hydroxycamphor + NAD+ = NADH + H+ + 2,5-diketocamphane.","definition_xrefs":["UM-BBD_reactionID:r0427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-exo-hydroxycamphor dehydrogenase activity","secondary_identifiers":["MetaCyc:R542-RXN","RHEA:32879","EC:1.1.1.327"],"termid":"GO:0018452"}


id: PBO:0053430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 375","termid":"PBO:0053430"}


id: FYPO:0002372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and are shaped in the form of spheroids.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable spheroid vegetative cell population (obsolete FYPO:0002372)","synonyms":[{"name":"population of spheroid viable cells","type":"exact"},{"name":"viable rounded vegetative cell population","type":"exact"}],"termid":"FYPO:0002372"}


id: PBO:0069632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 909, pseudogene","termid":"PBO:0069632"}


id: PBO:0072865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 3","termid":"PBO:0072865"}


id: MONDO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, aggressive variant of intrahepatic cholangiocarcinoma. It is characterized by the presence of adenocarcinoma cells that are intermingled with malignant pleomorphic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic cholangiocarcinoma","termid":"MONDO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"sarcomatous intrahepatic cholangiocarcinoma","secondary_identifiers":["MEDGEN:275403","NCIT:C41620","UMLS:C1519184","DOID:8072"],"synonyms":[{"name":"intrahepatic cholangiocarcinoma with extensive sarcomatous changes","type":"exact"},{"name":"sarcomatoid intrahepatic cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0004451","xrefs":{"Monarch":{"xref_id":"0004451"}}}


id: PBO:0077376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 117","termid":"PBO:0077376"}


id: PBO:0077438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 171","termid":"PBO:0077438"}


id: GO:0035525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer of NF-kappa B p50 and p65 subunits.","definition_xrefs":["GO:add","PMID:20393192","PMID:9299584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NF-kappaB complex","termid":"GO:0071159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NF-kappaB p50/p65 complex","synonyms":[{"name":"NF-kappa B1/RelA complex","type":"exact"},{"name":"NF-kappa B1/p65 complex","type":"exact"},{"name":"NF-kappa p105/RelA complex","type":"related"},{"name":"NF-kappa p105/p65 complex","type":"related"},{"name":"NF-kappa p50/RelA complex","type":"exact"}],"termid":"GO:0035525"}


id: GO:2000333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"negatively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood microparticle formation","synonyms":[{"name":"negative regulation of microparticle generation","type":"exact"},{"name":"negative regulation of microparticle release","type":"exact"}],"termid":"GO:2000333"}


id: PBO:0043570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VII alpha 1 chain","termid":"PBO:0043570"}


id: PBO:0048158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 4","termid":"PBO:0048158"}


id: PBO:0078472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (GTG) 2-1","termid":"PBO:0078472"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: PBO:0073503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 2","termid":"PBO:0073503"}


id: GO:0016846
data:
  {"annotated_genes":["SJAG_03671","SJAG_02205","SJAG_03199","SJAG_03856","SJAG_04726","SJAG_05256","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72282],"is_not":false,"summary":null,"term":"GO:0016846"},{"annotations":[69931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047804"},{"annotations":[72691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990411"},{"annotations":[78988,74610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004408"},{"annotations":[69784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004462"},{"annotations":[97448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the elimination of hydrogen sulfide or substituted H2S.","definition_xrefs":["EC:4.4.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02205":null,"SJAG_03199":null,"SJAG_03671":null,"SJAG_03856":null,"SJAG_04008":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carbon-sulfur lyase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1614567"],"synonyms":[{"name":"carbon-sulphur lyase activity","type":"exact"}],"termid":"GO:0016846","terms_by_termid":{"GO:0004408":null,"GO:0004462":null,"GO:0016846":null,"GO:0047804":null,"GO:0051907":null,"GO:1990411":null}}


id: PBO:0062487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 3","termid":"PBO:0062487"}


id: GO:0061514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-34 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18467591","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-34-mediated signaling pathway","termid":"GO:0061514"}


id: PBO:0024874
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short and long transcript produced, levels of each fluctuate with conditions","termid":"PBO:0024874"}


id: MONDO:0020270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmentation disorder with eye involvement (obsolete MONDO:0020270)","secondary_identifiers":["Orphanet:98700"],"termid":"MONDO:0020270","xrefs":{"Monarch":{"xref_id":"0020270"}}}


id: MONDO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial episodic pain syndrome in which the cause of the disease is a mutation in the SCN10A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial episodic pain syndrome","termid":"MONDO:0018319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"episodic pain syndrome, familial, 2","secondary_identifiers":["UMLS:C3809893","GARD:18440","MEDGEN:816223","OMIM:615551","DOID:0111730"],"synonyms":[{"name":"FEPS2","type":"related"},{"name":"SCN10A familial episodic pain syndrome","type":"exact"},{"name":"episodic pain syndrome, familial, 2","type":"exact"},{"name":"episodic pain syndrome, familial, type 2","type":"exact"},{"name":"familial episodic pain syndrome caused by mutation in SCN10A","type":"exact"}],"termid":"MONDO:0014246","xrefs":{"Monarch":{"xref_id":"0014246"}}}


id: PBO:0070297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 3","termid":"PBO:0070297"}


id: MONDO:1012229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive spinal myelopathy, non-human animal","termid":"MONDO:1011858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive spinal myelopathy, cattle","secondary_identifiers":["OMIA:000832-9913"],"termid":"MONDO:1012229","xrefs":{"Monarch":{"xref_id":"1012229"}}}


id: GO:0016552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place during transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete cotranscriptional insertion or deletion editing (obsolete GO:0016552)","synonyms":[{"name":"cotranscriptional insertion or deletion editing","type":"exact"},{"name":"cotranscriptional insertion/deletion editing","type":"exact"}],"termid":"GO:0016552"}


id: GO:0008181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor suppressor (obsolete GO:0008181)","synonyms":[{"name":"tumor suppressor","type":"exact"}],"termid":"GO:0008181"}


id: GO:0098933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont effects a change that impairs the structure or function of the host cell envelope. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cell envelope","synonyms":[{"name":"disruption by symbiont of host cell envelope","type":"exact"}],"termid":"GO:0098933"}


id: MONDO:0007636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontorhiny is a distinct syndromic type of frontonasal malformation characterized by hypertelorism, wide nasal bridge, broad columella, widened philtrum, widely separated narrow nares, poor development of nasal tip, midline notch of the upper alveolus, columella base swellings and a low hairline. Additional features reported in some include upper eyelid ptosis and midline dermoid cysts of craniofacial structures and philtral pits or rugose folding behind the ears. An autosomal recessive inheritance has been proposed.","definition_xrefs":["Orphanet:391474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontorhiny","secondary_identifiers":["NCIT:C129028","MEDGEN:1803615","DOID:0081045","GARD:12642","OMIM:136760","UMLS:C5574965"],"synonyms":[{"name":"ALX3-related frontonasal dysplasia","type":"exact"},{"name":"FND1","type":"related"},{"name":"frontonasal dysplasia","type":"related"},{"name":"frontonasal dysplasia 1","type":"related"},{"name":"frontonasal dysplasia type 1","type":"exact"},{"name":"frontonasal malformation","type":"related"},{"name":"frontorhiny","type":"exact"},{"name":"isolated median cleft face syndrome","type":"exact"},{"name":"isolated median cleft syndrome","type":"related"},{"name":"median Facial cleft syndrome","type":"related"}],"termid":"MONDO:0007636","xrefs":{"Monarch":{"xref_id":"0007636"}}}


id: GO:0032172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane within the germ tube of filamentous fungi at sites where a septum will form; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"part_of","term_name":"germ tube","termid":"GO:0032179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"germ tube septin ring","termid":"GO:0032172"}


id: MONDO:0017704
data:
  {"annotated_genes":["SJAG_00824","SJAG_02765","SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024556"},{"annotations":[89003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014924"},{"annotations":[89002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","definition":"An instance of partial epilepsy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00824":null,"SJAG_01184":null,"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial partial epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2173","MEDGEN:1826100","Orphanet:309","UMLS:C5680862"],"synonyms":[{"name":"epilepsy, partial, familial","type":"related"},{"name":"hereditary partial epilepsy","type":"exact"}],"termid":"MONDO:0017704","terms_by_termid":{"MONDO:0014924":null,"MONDO:0014925":null,"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0017704"}}}


id: PBO:0060414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA50 pseudogene 1","termid":"PBO:0060414"}


id: PR:O43079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1 complex subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02550","PRO:DNx","PANTHER:PTHR11134:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.02","secondary_identifiers":["UniProtKB:O43079"],"synonyms":[{"name":"Spom972h-AP1B1","type":"exact"},{"name":"beta(1)-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 1 beta-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43079"}


id: PR:P87052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 10 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.04","synonyms":[{"name":"Spom972h-mug10","type":"exact"}],"termid":"PR:P87052"}


id: MONDO:0014755
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87738],"is_not":false,"summary":null,"term":"MONDO:0014755"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple benign circumferential skin creases on limbs","termid":"MONDO:0007990"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin creases, congenital symmetric circumferential, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225225","MEDGEN:902880","GARD:16156","OMIM:616734","DOID:0112243"],"synonyms":[{"name":"CSCSC2","type":"exact"},{"name":"MAPRE2 multiple benign circumferential skin creases on limbs","type":"exact"},{"name":"multiple benign circumferential skin creases on limbs caused by mutation in MAPRE2","type":"exact"},{"name":"skin creases, congenital symmetric circumferential, 2","type":"exact"},{"name":"skin creases, congenital symmetric circumferential, 2; CSCSC2","type":"exact"},{"name":"skin creases, congenital symmetric circumferential, type 2","type":"exact"},{"name":"symmetric circumferential skin creases, congenital, 2","type":"exact"}],"termid":"MONDO:0014755","terms_by_termid":{"MONDO:0014755":null},"xrefs":{"Monarch":{"xref_id":"0014755"}}}


id: GO:1900584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of o-orsellinic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"o-orsellinic acid metabolic process","termid":"GO:1900582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid biosynthetic process","synonyms":[{"name":"o-orsellinic acid anabolism","type":"exact"},{"name":"o-orsellinic acid biosynthesis","type":"exact"},{"name":"o-orsellinic acid formation","type":"exact"},{"name":"o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900584"}


id: GO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin B17, a bactericidal peptide (antibiotic) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11292337","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcin transport","termid":"GO:0042884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"microcin B17 transport","termid":"GO:0042885"}


id: PBO:0073856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A5","termid":"PBO:0073856"}


id: PBO:0077655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 6b","termid":"PBO:0077655"}


id: MONDO:0006587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nodular nonsuppurative panniculitis (obsolete MONDO:0006587)","termid":"MONDO:0006587","xrefs":{"Monarch":{"xref_id":"0006587"}}}


id: GO:1905100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:26265044","GOC:bc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of apoptosome assembly","synonyms":[{"name":"regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905100"}


id: MONDO:0015221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A respiratory or mediastinal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","secondary_identifiers":["Orphanet:108993"],"synonyms":[{"name":"isolated respiratory or mediastinal malformation","type":"exact"},{"name":"nonsyndromic respiratory or mediastinal malformation","type":"exact"}],"termid":"MONDO:0015221","xrefs":{"Monarch":{"xref_id":"0015221"}}}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["EC:1.14.12.14","RHEA:23468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["GO:0018605","KEGG_REACTION:R05156","MetaCyc:2ASDOSALCAL-RXN","UM-BBD_reactionID:r0218"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: GO:0030694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The central portion of the bacterial-type flagellar basal body, which spans the periplasm and threads through the rings.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","PMID:11133968","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, rod","synonyms":[{"name":"flagellar basal body, rod","type":"exact"},{"name":"flagellin-based flagellum basal body, rod","type":"exact"}],"termid":"GO:0030694"}


id: PBO:0086693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced in respiratory-deficient cells","termid":"PBO:0086693"}


id: GO:0019388
data:
  {"annotated_genes":["SJAG_02951","SJAG_02954","SJAG_03818","SJAG_02950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115744,115732,115733,115726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose breakdown","type":"exact"},{"name":"galactose catabolism","type":"exact"},{"name":"galactose degradation","type":"exact"}],"termid":"GO:0019388","terms_by_termid":{"GO:0033499":null}}


id: PBO:0028481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activation_of_monopolar_cell_growth_at_new_end","termid":"PBO:0028481"}


id: GO:0033495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ferulate, (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferulate metabolic process","termid":"GO:0033494"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ferulate biosynthetic process","synonyms":[{"name":"ferulate anabolism","type":"exact"},{"name":"ferulate biosynthesis","type":"exact"},{"name":"ferulate formation","type":"exact"},{"name":"ferulate synthesis","type":"exact"}],"termid":"GO:0033495"}


id: FYPO:0004134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to diethyl maleate","synonyms":[{"name":"decreased RNA accumulation during cellular response to diethyl maleate","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"exact"},{"name":"decreased RNA level during cellular response to diethyl maleate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to diethyl maleate during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased transcript level during cellular response to diethyl maleate","type":"exact"},{"name":"reduced RNA level during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0004134"}


id: PBO:0082743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p","termid":"PBO:0082743"}


id: PBO:0113749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 5","termid":"PBO:0113749"}


id: GO:0010781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which double-strand breaks are generated at defined hotspots throughout the genome during meiosis I resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic DNA double-strand break formation involved in meiotic gene conversion","termid":"GO:0010781"}


id: GO:1990970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trans-activation response (TAR) element, a hairpin RNA structure located at the 5' end of all HIV-1 transcripts, and which is required for trans-activation of a viral promoter.","definition_xrefs":["GOC:PARL","Wikipedia:Trans-activation_response_element_(TAR)","GOC:bf","PMID:25116364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA binding","termid":"GO:0070883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"trans-activation response element binding","synonyms":[{"name":"TAR binding","type":"exact"}],"termid":"GO:1990970"}


id: PBO:0080486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B1","termid":"PBO:0080486"}


id: MONDO:0008691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc, elevated plasma","secondary_identifiers":["MEDGEN:349756","UMLS:C1860228","OMIM:194470"],"synonyms":[{"name":"albumin binding of zinc, elevated","type":"related"},{"name":"hyperzincemia and hypercalprotectinemia","type":"related"},{"name":"hyperzincemia, familial Dysalbuminemic","type":"related"},{"name":"zinc, elevated plasma","type":"exact"}],"termid":"MONDO:0008691","xrefs":{"Monarch":{"xref_id":"0008691"}}}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: GO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the alternating alpha-(1->2)-linked rhamnose and alpha-(1->2)-linked B-galacturonic acid residues of the rhamnogalacturonan I backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I metabolic process","termid":"GO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan I backbone metabolism","type":"exact"}],"termid":"GO:0010399"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["RHEA:19977","EC:2.8.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R04213","MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN","GO:0008128"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: MONDO:0003004
data:
  {"annotated_genes":["SJAG_01356","SJAG_03258","SJAG_00737","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89154,89155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012419"},{"annotations":[87940,87941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Loss of vision in the central portion of the retina (macula), secondary to retinal degeneration.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01356":null,"SJAG_02885":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009606","DOID:4448","UMLS:C0024437","NCIT:C123330","MESH:D008268","SCTID:422338006","MEDGEN:7434"],"synonyms":[{"name":"macula lutea retinal degeneration","type":"exact"},{"name":"macula retinal degeneration","type":"exact"},{"name":"macular degeneration of retina","type":"exact"},{"name":"retinal degeneration of macula lutea","type":"exact"}],"termid":"MONDO:0003004","terms_by_termid":{"MONDO:0010819":null,"MONDO:0012419":null},"xrefs":{"Monarch":{"xref_id":"0003004"}}}


id: GO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of oligopeptide transport","termid":"GO:0090088"}


id: GO:0046822
data:
  {"annotated_genes":["SJAG_01311","SJAG_04312","SJAG_01805","SJAG_02592","SJAG_03048","SJAG_03453","SJAG_04464","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[103797,113014,95702,102377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[104332,96270,92732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046822","terms_by_termid":{"GO:0042307":null,"GO:0042308":null,"GO:0046827":null}}


id: PBO:0089444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent alpha-hydroxy acid dehydrogenase","termid":"PBO:0089444"}


id: PBO:0061378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 38","termid":"PBO:0061378"}


id: MONDO:0009606
data:
  {"annotated_genes":["SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87824],"is_not":false,"summary":null,"term":"MONDO:0009606"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"methemoglobinemia due to deficiency of methemoglobin reductase","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268193","GARD:15197","OMIM:250800","MEDGEN:75661"],"synonyms":[{"name":"NADH cytochrome B5 reductase deficiency","type":"related"},{"name":"NADH diaphorase deficiency","type":"related"},{"name":"NADH methemoglobin reductase deficiency","type":"related"},{"name":"NADH-cytochrome B5 reductase deficiency","type":"related"},{"name":"NADH-cytochrome B5 reductase deficiency, type 1","type":"related"},{"name":"NADH-cytochrome B5 reductase deficiency, type 2","type":"related"},{"name":"NADH-dependent methemoglobin reductase deficiency","type":"related"},{"name":"methemoglobinemia due to deficiency of methemoglobin reductase","type":"exact"},{"name":"methemoglobinemia, congenital, autosomal recessive","type":"related"},{"name":"methemoglobinemia, type 1","type":"related"},{"name":"methemoglobinemia, type 2","type":"related"},{"name":"methemoglobinemia, type I","type":"exact"},{"name":"methemoglobinemia, type II","type":"exact"}],"termid":"MONDO:0009606","terms_by_termid":{"MONDO:0009606":null},"xrefs":{"Monarch":{"xref_id":"0009606"}}}


id: PBO:0005419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigilin (predicted)","termid":"PBO:0005419"}


id: PBO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 11","termid":"PBO:0046569"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: FYPO:0000100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chloramphenicol. Cells stop growing (and may die) at a concentration of chloramphenicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to chloramphenicol","synonyms":[{"name":"hypersensitive to chloramphenicol","type":"exact"},{"name":"sensitive to chloramphenicol during mitotic cell cycle","type":"related"},{"name":"sensitive to chloramphenicol during vegetative growth","type":"exact"}],"termid":"FYPO:0000100"}


id: PBO:0110497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 4","termid":"PBO:0110497"}


id: MONDO:0006917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrosis induced by ischemia in the posterior cerebral artery distribution system which supplies portions of the brain stem; the thalamus; temporal lobe, and occipital lobe. Depending on the size and location of infarction, clinical features include olfaction disorders and visual problems (agnosia; alexia; hemianopsia).","definition_xrefs":["MESH:D020762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral infarction","termid":"MONDO:0002679"},{"relation_name":"is_a","term_name":"cerebral arterial disease","termid":"MONDO:0006693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior cerebral artery infarction","secondary_identifiers":["MEDGEN:199818","DOID:3821","UMLS:C0752132","EFO:1001118"],"termid":"MONDO:0006917","xrefs":{"Monarch":{"xref_id":"0006917"}}}


id: GO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesangial cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell development","termid":"GO:0072143"}


id: MONDO:0016908
data:
  {"annotated_genes":["SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 9","termid":"MONDO:0016874"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00112":null},"genotype_count":0,"is_obsolete":false,"name":"partial monosomy of the long arm of chromosome 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5679677","Orphanet:262074","icd11.foundation:1051626600","MEDGEN:1826024","GARD:20829"],"synonyms":[{"name":"partial deletion of chromosome 9q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 9","type":"exact"},{"name":"partial monosomy of chromosome 9q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome type 9","type":"exact"}],"termid":"MONDO:0016908","terms_by_termid":{"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0016908"}}}


id: PBO:0070237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 175 pseudogene","termid":"PBO:0070237"}


id: MONDO:0014662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by congenital insensitivity to pain and decreased sweating and tear production that has material basis in homozygous mutation in the PRDM12 gene on chromosome 9q34.","definition_xrefs":["DOID:0070153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"congenital insensitivity to pain-hypohidrosis syndrome","secondary_identifiers":["UMLS:C4225308","MEDGEN:894363","Orphanet:478664","GARD:17866","OMIM:616488"],"synonyms":[{"name":"CIP-hypohidrosis syndrome","type":"exact"},{"name":"HSAN 8","type":"related"},{"name":"HSAN8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 8","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type VIII","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type 8","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type VIII","type":"related"}],"termid":"MONDO:0014662","xrefs":{"Monarch":{"xref_id":"0014662"}}}


id: PBO:0028041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-astral_microtubules_absent_from_cell","termid":"PBO:0028041"}


id: PBO:0034302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_disposition","termid":"PBO:0034302"}


id: PBO:0070509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 8","termid":"PBO:0070509"}


id: MONDO:0004440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the pineal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pineal gland cancer","termid":"MONDO:0003249"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pineal region meningioma","secondary_identifiers":["NCIT:C6756","MEDGEN:235478","UMLS:C1335418","DOID:8031"],"synonyms":[{"name":"meningioma (disease) of pineal body","type":"exact"},{"name":"meningioma of pineal area","type":"exact"},{"name":"meningioma of pineal gland","type":"exact"},{"name":"meningioma of pineal region","type":"exact"},{"name":"meningioma of the pineal area","type":"exact"},{"name":"meningioma of the pineal gland","type":"exact"},{"name":"meningioma of the pineal region","type":"exact"},{"name":"pineal area meningioma","type":"exact"},{"name":"pineal body meningioma (disease)","type":"exact"},{"name":"pineal gland meningioma","type":"exact"},{"name":"pineal meningioma","type":"exact"}],"termid":"MONDO:0004440","xrefs":{"Monarch":{"xref_id":"0004440"}}}


id: GO:0097632
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96527],"is_not":false,"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"phagophore assembly site membrane","termid":"GO:0034045"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000407"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0000407","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of phagophore assembly site membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic component of pre-autophagosomal structure membrane","type":"narrow"},{"name":"extrinsic to phagophore assembly site membrane","type":"exact"},{"name":"phagophore assembly site peripheral membrane","type":"related"}],"termid":"GO:0097632","terms_by_termid":{"GO:0097632":null}}


id: PBO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 2","termid":"PBO:0046525"}


id: PBO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calaxin","termid":"PBO:0043385"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


id: PBO:0116998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HemK methyltransferase 1, mitochondrial release factors N(5)-glutamine","termid":"PBO:0116998"}


id: GO:2000932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellobiose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellobiose metabolic process","termid":"GO:2000930"},{"relation_name":"positively_regulates","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellobiose metabolic process","synonyms":[{"name":"positive regulation of cellobiose metabolism","type":"exact"}],"termid":"GO:2000932"}


id: PATO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A speed which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"speed","termid":"PATO:0000008"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased speed","synonyms":[{"name":"fast speed","type":"related"},{"name":"high speed","type":"exact"}],"termid":"PATO:0000303"}


id: PBO:0081758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 688","termid":"PBO:0081758"}


id: PBO:0027817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_arginine_catabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027817"}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: PBO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically induced MYC interacting lncRNA 1","termid":"PBO:0046435"}


id: PBO:0029119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_cell_with_increased_DNA_content_during_stationary_phase","termid":"PBO:0029119"}


id: GO:1904342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["PMID:24170253","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"is_a","term_name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"},{"relation_name":"negatively_regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of colon smooth muscle contraction","synonyms":[{"name":"down regulation of colon smooth muscle contraction","type":"exact"},{"name":"down-regulation of colon smooth muscle contraction","type":"exact"},{"name":"downregulation of colon smooth muscle contraction","type":"exact"},{"name":"inhibition of colon smooth muscle contraction","type":"narrow"}],"termid":"GO:1904342"}


id: MONDO:0013167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 16","secondary_identifiers":["UMLS:C2751012","MESH:C567726","MEDGEN:442620","OMIM:613164"],"synonyms":[{"name":"PARK16","type":"exact"},{"name":"Parkinson disease 16","type":"related"}],"termid":"MONDO:0013167","xrefs":{"Monarch":{"xref_id":"0013167"}}}


id: GO:0044583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellotriose.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide binding","termid":"GO:0048031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellotriose binding","termid":"GO:0044583"}


id: GO:0031957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very long-chain fatty acid + ATP + CoA = a very long-chain fatty acyl-CoA + AMP + diphosphate. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:18024425","RHEA:54536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"very long-chain fatty acid-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-5696007","Reactome:R-HSA-5695957","Reactome:R-HSA-9914143","Reactome:R-HSA-8875077"],"synonyms":[{"name":"very-long-chain fatty acid activation","type":"related"},{"name":"very-long-chain fatty acid-CoA ligase activity","type":"exact"},{"name":"very-long-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031957"}


id: PBO:0003660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex regulatory subunit Naa25","termid":"PBO:0003660"}


id: MONDO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any abnormality, anatomical or biochemical, evident at birth or during the neonatal period.","definition_xrefs":["NCIT:C2849"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital abnormality (obsolete MONDO:0000839)","secondary_identifiers":["ICD9:759.89","NANDO:1200957","MESH:D000013","ICD9:759.9","SCTID:276654001","DOID:0080015"],"synonyms":[{"name":"CM - congenital malformation","type":"related"},{"name":"SCONG","type":"exact"},{"name":"birth defect","type":"exact"},{"name":"congenital Abnormality","type":"exact"},{"name":"congenital abnormality","type":"exact"},{"name":"congenital anatomic Abnormality","type":"exact"},{"name":"congenital anatomical Abnormality","type":"exact"},{"name":"congenital anomalies of fetus","type":"exact"},{"name":"congenital anomaly","type":"exact"},{"name":"congenital anomaly or birth defect","type":"exact"},{"name":"congenital defect","type":"exact"},{"name":"congenital defect/deformity","type":"exact"},{"name":"congenital deformity","type":"exact"},{"name":"congenital malformation","type":"exact"},{"name":"defect/deformity, Congenital","type":"exact"},{"name":"defect/deformity, congenital","type":"exact"},{"name":"deformity/defect, Congenital","type":"exact"},{"name":"fetal developmental abnormality","type":"related"},{"name":"fetal malformation","type":"related"},{"name":"physical disorder","type":"exact"}],"termid":"MONDO:0000839","xrefs":{"Monarch":{"xref_id":"0000839"}}}


id: PBO:0038374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_exposure_to","termid":"PBO:0038374"}


id: GO:0007068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription during mitotic cell cycle (obsolete GO:0007068)","synonyms":[{"name":"down regulation of transcription during mitosis","type":"exact"},{"name":"down-regulation of transcription during mitosis","type":"exact"},{"name":"downregulation of transcription during mitosis","type":"exact"},{"name":"inhibition of transcription during mitosis","type":"narrow"},{"name":"mitotic repression of transcription","type":"exact"},{"name":"negative regulation of transcription, mitotic","type":"exact"}],"termid":"GO:0007068"}


id: FYECO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper(II) sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuSO4","synonyms":[{"name":"+ copper(II) sulfate","type":"exact"}],"termid":"FYECO:0000249"}


id: GO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"positive regulation of NOD2 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070434"}


id: PBO:0079740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 7","termid":"PBO:0079740"}


id: FYPO:0006806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased galactosyltransferase activity","synonyms":[{"name":"reduced galactosyltransferase activity","type":"exact"}],"termid":"FYPO:0006806"}


id: PBO:0066000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALBP1 pseudogene 2","termid":"PBO:0066000"}


id: PBO:0055121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2540","termid":"PBO:0055121"}


id: PBO:0087487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C); a complex which methylates histone H3 on lysine 4 and is required in telomeric transcriptional silencing; promotes meiotic DSB formation by interacting with H3K4me3 and Rec107p, a protein required for Spo11p-catalyzed DSB formation located on chromosome axes; interacts with Orc2p; PHD finger domain protein similar to human CGBP, an unmethylated CpG binding protein; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087487"}


id: MONDO:0025013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of animals within the order primates. This term includes diseases of Haplorhini and Strepsirhini.","definition_xrefs":["MESH:D018419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human primate disease","synonyms":[{"name":"Primate disease","type":"related"},{"name":"disease, Primate","type":"related"},{"name":"diseases, Primate","type":"related"}],"termid":"MONDO:0025013","xrefs":{"Monarch":{"xref_id":"0025013"}}}


id: PBO:0057589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892b","termid":"PBO:0057589"}


id: MONDO:1010943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169"},{"relation_name":"is_a","term_name":"mycosis fungoides, non-human animal","termid":"MONDO:1010211"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, dog","termid":"MONDO:1010948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, dog","secondary_identifiers":["OMIA:001109-9615"],"termid":"MONDO:1010943","xrefs":{"Monarch":{"xref_id":"1010943"}}}


id: PBO:0087745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; SWI/SNF regulates transcription by remodeling chromosomes; contains SANT domain that is required for SWI/SNF assembly; is essential for displacement of histone H2A-H2B dimers during ATP-dependent remodeling; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087745"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: MONDO:0850128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A male reproductive system disease that is located in the epididymis.","definition_xrefs":["DOID:0080373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymis disease","termid":"MONDO:0850128","xrefs":{"Monarch":{"xref_id":"0850128"}}}


id: PBO:0036515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get4 (predicted)","termid":"PBO:0036515"}


id: GO:0051082
data:
  {"annotated_genes":["SJAG_04518","SJAG_03782","SJAG_03320","SJAG_03463","SJAG_01052","SJAG_01615","SJAG_04228","SJAG_04014","SJAG_03794","SJAG_01002","SJAG_02694","SJAG_05189","SJAG_04571","SJAG_01664","SJAG_01641","SJAG_03551","SJAG_00524","SJAG_02378","SJAG_04012","SJAG_01626","SJAG_03135","SJAG_01684","SJAG_03570","SJAG_00403","SJAG_02926","SJAG_00447","SJAG_05191","SJAG_01747","SJAG_04567","SJAG_01545","SJAG_00436","SJAG_04187","SJAG_04121","SJAG_00609","SJAG_01621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58467,59411,60302,60536,62151,65691,67971,68262,68971,69066,71568,71589,71672,72038,72848,73452,74431,75376,75991,76101,76916,77184,77952,77965,78575,79847,79941,80370,80803,80945,81198,81335,81454,81591,82156],"is_not":false,"summary":null,"term":"GO:0051082"}]},"cv_name":"molecular_function","definition":"Binding to an unfolded protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00447":null,"SJAG_00524":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_01052":null,"SJAG_01545":null,"SJAG_01615":null,"SJAG_01621":null,"SJAG_01626":null,"SJAG_01641":null,"SJAG_01664":null,"SJAG_01684":null,"SJAG_01747":null,"SJAG_02378":null,"SJAG_02694":null,"SJAG_02926":null,"SJAG_03135":null,"SJAG_03320":null,"SJAG_03463":null,"SJAG_03551":null,"SJAG_03570":null,"SJAG_03782":null,"SJAG_03794":null,"SJAG_04012":null,"SJAG_04014":null,"SJAG_04121":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04518":null,"SJAG_04567":null,"SJAG_04571":null,"SJAG_05189":null,"SJAG_05191":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"unfolded protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9683772","Reactome:R-HSA-9694337"],"synonyms":[{"name":"chaperone activity","type":"broad"}],"termid":"GO:0051082","terms_by_termid":{"GO:0051082":null}}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: PBO:0031246
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_conversion","termid":"PBO:0031246"}


id: GO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus","termid":"GO:0050981"}


id: GO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parathyroid gland development","termid":"GO:0060017"}


id: GO:0006693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"prostaglandin metabolic process","synonyms":[{"name":"prostaglandin metabolism","type":"exact"}],"termid":"GO:0006693"}


id: GO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (mating sensu Fungi) (obsolete GO:0030456)","synonyms":[{"name":"activation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030456"}


id: MONDO:0004923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic inflammation of lacrimal passage","secondary_identifiers":["MEDGEN:509865","DOID:9935","ICD9:375.4","SCTID:267653001","UMLS:C0155239"],"termid":"MONDO:0004923","xrefs":{"Monarch":{"xref_id":"0004923"}}}


id: FYPO:0000683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the basal activity of an enzyme is increased relative to normal. Basal enzyme activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"output_of","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"constitutive catalytic activity","synonyms":[{"name":"constitutive catalytic activity during mitotic cell cycle","type":"related"},{"name":"constitutive catalytic activity during vegetative growth","type":"exact"},{"name":"constitutive enzymatic activity","type":"exact"},{"name":"constitutively active enzyme","type":"related"}],"termid":"FYPO:0000683"}


id: GO:0009898
data:
  {"annotated_genes":["SJAG_05207","SJAG_02605","SJAG_03596","SJAG_04666","SJAG_04026","SJAG_00368","SJAG_03081","SJAG_04077","SJAG_04509","SJAG_01774","SJAG_02989","SJAG_01738","SJAG_01242","SJAG_02444","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72462,78004,80014,81562,89747,91607,94302,100903,112856],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[108559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[112533],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[75975,108467,82192,77071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_01242":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03596":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"internal leaflet of plasma membrane","type":"exact"},{"name":"internal side of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"}],"termid":"GO:0009898","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0031234":null,"GO:0106186":null}}


id: PBO:0029066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_riboflavin_binding","termid":"PBO:0029066"}


id: PBO:0039562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54 pseudogene 1","termid":"PBO:0039562"}


id: PR:Q9UTJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu1-1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTJ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.06","synonyms":[{"name":"Spom972h-meu1-1","type":"exact"}],"termid":"PR:Q9UTJ3"}


id: GO:0061455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the muscle cell projection membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dph","GOC:dos","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of muscle cell projection membrane (obsolete GO:0061455)","synonyms":[{"name":"integral to muscle cell projection membrane","type":"exact"}],"termid":"GO:0061455"}


id: MONDO:1011217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, llama","secondary_identifiers":["OMIA:000219-9844"],"termid":"MONDO:1011217","xrefs":{"Monarch":{"xref_id":"1011217"}}}


id: FYPO:0007886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 does not occur.","definition_xrefs":["PMID:34524082","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0007886"}


id: PBO:0016998
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAT5","termid":"PBO:0016998"}


id: MONDO:0014223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the ERBB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 19","secondary_identifiers":["UMLS:C3715155","MEDGEN:811607","DOID:0060210","GARD:15980","OMIM:615515"],"synonyms":[{"name":"ALS19","type":"exact"},{"name":"ERBB4 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 19","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in ERBB4","type":"exact"},{"name":"amyotrophic lateral sclerosis type 19","type":"exact"}],"termid":"MONDO:0014223","xrefs":{"Monarch":{"xref_id":"0014223"}}}


id: MONDO:0019454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by the presence of 5-19% myeloblasts in the bone marrow or 2-19% blasts in the peripheral blood. It includes two categories: myelodysplastic syndrome with excess blasts-1 and myelodysplastic syndrome with excess blasts-2.","definition_xrefs":["NCIT:C7506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with excess blasts","secondary_identifiers":["GARD:19070","EFO:0003811","MedDRA:10038270","SCTID:398623004","MESH:D000754","ICDO:9983/3","MEDGEN:8066","UMLS:C0002894","Orphanet:86839"],"synonyms":[{"name":"MDS-EB","type":"exact"},{"name":"RAEB","type":"exact"},{"name":"myelodysplastic syndrome with Excess blasts","type":"exact"},{"name":"refractory Anaemia with Excess blasts","type":"exact"},{"name":"refractory Anaemia with an Excess of blasts","type":"exact"},{"name":"refractory Anemia with Excess blasts","type":"exact"},{"name":"refractory Anemia with an Excess of blasts","type":"exact"}],"termid":"MONDO:0019454","xrefs":{"Monarch":{"xref_id":"0019454"}}}


id: GO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an atrial cardiomyocyte to an AV node cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"gap junction channel activity involved in atrial cardiac muscle cell-AV node cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrial cardiomyocyte-AV node cell electrical coupling","type":"related"},{"name":"gap junction channel activity involved in atrial cardiomyocyte-atrioventricular node cell electrical coupling","type":"exact"}],"termid":"GO:0086076"}


id: MONDO:0007575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrokeratodermia variabilis (obsolete MONDO:0007575)","termid":"MONDO:0007575","xrefs":{"Monarch":{"xref_id":"0007575"}}}


id: PBO:0071273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 7","termid":"PBO:0071273"}


id: FYPO:0007395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell is abnormal.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal heme import","synonyms":[{"name":"abnormal haem import","type":"exact"},{"name":"abnormal heme import during mitotic cell cycle","type":"related"},{"name":"abnormal heme import during vegetative growth","type":"exact"},{"name":"abnormal heme import into cell","type":"exact"}],"termid":"FYPO:0007395"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: FYPO:0004444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PMID:21832151","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"reduced protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004444"}


id: PBO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 51","termid":"PBO:0071632"}


id: PBO:0054549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1949","termid":"PBO:0054549"}


id: PBO:0068082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 388","termid":"PBO:0068082"}


id: SO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the 5' D-heptamer (SO:0000496) and 5' D-nonamer (SO:0000497) of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_spacer","synonyms":[{"name":"5'-SPACER","type":"exact"},{"name":"five prime D spacer","type":"exact"},{"name":"five prime D-spacer","type":"exact"}],"termid":"SO:0000498"}


id: PBO:0065418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 5","termid":"PBO:0065418"}


id: GO:0150165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated inhibition of transcription by RNA polymerase II (obsolete GO:0150165)","termid":"GO:0150165"}


id: PBO:0046727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enah/Vasp-like","termid":"PBO:0046727"}


id: PBO:0083073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dimeric hypoxanthine-guanine phosphoribosyltransferase; catalyzes the transfer of the phosphoribosyl portion of 5-phosphoribosyl-alpha-1-pyrophosphate to a purine base (either guanine or hypoxanthine) to form pyrophosphate and a purine nucleotide (either guanosine monophosphate or inosine monophosphate); mutations in the human homolog HPRT1 can cause Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0083073"}


id: GO:1903138
data:
  {"annotated_genes":["SJAG_02392","SJAG_05000","SJAG_01114","SJAG_04522","SJAG_03263","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97763,101367,105750,109017,109585,120364],"is_not":false,"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cell integrity MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stress-activated MAPK cascade","termid":"GO:0032873"},{"relation_name":"is_a","term_name":"regulation of cell integrity MAPK cascade","termid":"GO:1903137"},{"relation_name":"negatively_regulates","term_name":"cell integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inhibition of Mpk1 cascade","type":"narrow"},{"name":"inhibition of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"inhibition of cell wall biogenesis, MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"negative regulation of Mpk1 cascade","type":"narrow"},{"name":"negative regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"negative regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"negative regulation of cell integrity MAPK pathway","type":"exact"},{"name":"negative regulation of cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:1903138","terms_by_termid":{"GO:1903138":null}}


id: FYPO:0003466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to a heat stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to heat","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to heat","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003466"}


id: FYPO:0003245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the daughter nuclei formed by mitosis cluster in the middle of the cell during telophase. Normally, daughter nuclei move away from the cell division site during mitotic telophase.","definition_xrefs":["PomBase:mah","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"telophase nuclear clustering","synonyms":[{"name":"daughter nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"kissing nuclei","type":"exact"},{"name":"nuclear clustering during mitotic telophase","type":"exact"},{"name":"nuclei clustered at cell division site during mitotic telophase","type":"exact"},{"name":"telophase nuclear clustering during vegetative growth","type":"related"}],"termid":"FYPO:0003245"}


id: PBO:0084199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone methyltransferase with a role in transcriptional elongation; methylates H3 lysine 36 (H3K36), which suppresses incorporation of acetylated histones and signals for the deacetylation of these histones within transcribed genes; associates with the C-terminal domain(CTD) of Rpo21p; H3K36me3 (trimethylation) requires Spt6p, proline 38 on H3, CTD of Rpo21p, Ctk1p, and C-terminal SRI domain of Ste2p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084199"}


id: MONDO:0016217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mal de debarquement (MdD) is a rare otorhinolaryngological disease characterized by a persistent sensation of motion such as rocking, swaying, tumbling and/or bobbing following a period of exposure to passive movement, usually an ocean cruise or other types of water, train, automobile or air travel and less commonly other movements (like sleeping on a waterbed). Onset may be spontaneous in some patients. Manifestations begin shortly after the stimulus, persist for 6 months to years and may be associated with anxiety, fatigue and impaired cognition. Symptoms are often accentuated when in an enclosed space or when attempting to be motionless (sitting, lying down or standing in a stationary position) and are relieved when in passive motion such as in a moving car, airplane or train.","definition_xrefs":["Orphanet:210272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal de Debarquement","secondary_identifiers":["GARD:6959","MEDGEN:345629","SCTID:446079007","MESH:C537840","MedDRA:10064924","UMLS:C1608983","icd11.foundation:459420954","NORD:1394"],"synonyms":[{"name":"MDD","type":"exact"},{"name":"Mal de debarquement syndrome","type":"related"},{"name":"Mal de débarquement","type":"related"},{"name":"MdDS","type":"exact"},{"name":"disembarkment syndrome","type":"exact"},{"name":"sickness of disembarkment","type":"exact"}],"termid":"MONDO:0016217","xrefs":{"Monarch":{"xref_id":"0016217"}}}


id: PBO:0091570
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Light Intermediate chain","termid":"PBO:0091570"}


id: GO:1905909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dauer entry.","definition_xrefs":["GOC:TermGenie","PMID:21531333","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer entry","synonyms":[{"name":"regulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905909"}


id: MONDO:0010096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tardive dyskinesia","secondary_identifiers":["HP:0040141","MESH:D000071057","OMIM:272620","UMLS:C0686347","SCTID:102449007","MEDGEN:151939"],"synonyms":[{"name":"tardive dyskinesia","type":"exact"},{"name":"tardive dyskinesia (disease)","type":"exact"}],"termid":"MONDO:0010096","xrefs":{"Monarch":{"xref_id":"0010096"}}}


id: MONDO:1012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"forelimb-girdle muscular anomaly, non-human animal","termid":"MONDO:1011798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forelimb-girdle muscular anomaly, cattle","secondary_identifiers":["OMIA:001442-9913"],"termid":"MONDO:1012384","xrefs":{"Monarch":{"xref_id":"1012384"}}}


id: GO:1902568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"positively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil activation","synonyms":[{"name":"activation of eosinophil activation","type":"narrow"},{"name":"up regulation of eosinophil activation","type":"exact"},{"name":"up-regulation of eosinophil activation","type":"exact"},{"name":"upregulation of eosinophil activation","type":"exact"}],"termid":"GO:1902568"}


id: PBO:0078817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 1-1","termid":"PBO:0078817"}


id: MONDO:0018497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare autonomic nervous system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare autonomic nervous system disorder (obsolete MONDO:0018497)","secondary_identifiers":["Orphanet:423662"],"synonyms":[{"name":"rare autonomic nervous system disease","type":"exact"}],"termid":"MONDO:0018497","xrefs":{"Monarch":{"xref_id":"0018497"}}}


id: PBO:0111532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 3","termid":"PBO:0111532"}


id: SO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_thio_2prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_thio_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:060"],"synonyms":[{"name":"2-thio-2'-O-methyluridine","type":"exact"},{"name":"s2Um","type":"exact"},{"name":"two thio two prime O methyluridine","type":"exact"}],"termid":"SO:0001352"}


id: GO:0032800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor biosynthetic process (obsolete GO:0032800)","synonyms":[{"name":"receptor anabolism","type":"exact"},{"name":"receptor biosynthesis","type":"exact"},{"name":"receptor formation","type":"exact"},{"name":"receptor synthesis","type":"exact"}],"termid":"GO:0032800"}


id: FYPO:0000980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing amphotericin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on amphotericin B","synonyms":[{"name":"normal cell population growth on amphotericin B","type":"exact"},{"name":"normal vegetative cell population growth on amphotericin B","type":"exact"}],"termid":"FYPO:0000980"}


id: GO:2000032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary shoot formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary shoot formation","synonyms":[{"name":"regulation of auxiliary shoot formation","type":"related"},{"name":"regulation of axillary shoot formation","type":"related"},{"name":"regulation of axillary shoot system formation","type":"exact"},{"name":"regulation of shoot branching","type":"related"}],"termid":"GO:2000032"}


id: MONDO:0020495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PEHO-like syndrome is a rare, genetic neurological disease characterized by progressive encephalopathy, early-onset seizures with a hypsarrhythmic pattern, facial and limb edema, severe hypotonia, early arrest of psychomotor development and craniofacial dysmorphism (evolving microcephaly, narrow forehead, short nose, prominent auricles, open mouth, micrognathia), in the absence of neuro-ophthalmic or neuroradiologic findings. Poor visual responsiveness, growth failure and tapering fingers are also associated.","definition_xrefs":["Orphanet:99807"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"PEHO syndrome","termid":"MONDO:0009841"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEHO-like syndrome","secondary_identifiers":["MEDGEN:337956","GARD:16911","UMLS:C1850056","OMIM:617507"],"synonyms":[{"name":"PEHO syndrome-like","type":"exact"},{"name":"PEHOL","type":"related"},{"name":"peho-like syndrome","type":"exact"},{"name":"progressive encephalopathy with edema, hypsarrhythmia, and optic atrophy-like syndrome","type":"exact"}],"termid":"MONDO:0020495","xrefs":{"Monarch":{"xref_id":"0020495"}}}


id: MONDO:0017344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-related tumor","termid":"MONDO:0017342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-associated carcinoma","secondary_identifiers":["UMLS:C5679940","GARD:21148","MEDGEN:1842328","NCIT:C27690","Orphanet:289651"],"synonyms":[{"name":"EBV-associated carcinoma","type":"exact"}],"termid":"MONDO:0017344","xrefs":{"Monarch":{"xref_id":"0017344"}}}


id: GO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"},{"relation_name":"part_of","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"platelet aggregation","synonyms":[{"name":"blood platelet aggregation","type":"exact"},{"name":"thrombocyte aggregation","type":"related"}],"termid":"GO:0070527"}


id: PBO:0054456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1853","termid":"PBO:0054456"}


id: PBO:0005409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf5","termid":"PBO:0005409"}


id: PBO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2/OR16-5 (non-functional)","termid":"PBO:0051133"}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: PBO:0113383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein, involved in salt tolerance; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YMR253C is not an essential gene","termid":"PBO:0113383"}


id: PBO:0081475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 350","termid":"PBO:0081475"}


id: MONDO:0001815
data:
  {"annotated_genes":["SJAG_02210","SJAG_01598","SJAG_01772","SJAG_03900","SJAG_01942","SJAG_04003","SJAG_03098","SJAG_04966","SJAG_00690","SJAG_02680","SJAG_03551","SJAG_03275","SJAG_04840","SJAG_03244","SJAG_01236","SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[88426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025691"},{"annotations":[87887,87886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030486"},{"annotations":[87928,87927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030513"},{"annotations":[88795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030958"},{"annotations":[88182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957385"},{"annotations":[86879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[88876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[88970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[88109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[87961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"},{"annotations":[87044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007493"},{"annotations":[87681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01236":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_01942":null,"SJAG_02007":null,"SJAG_02210":null,"SJAG_02680":null,"SJAG_03098":null,"SJAG_03244":null,"SJAG_03275":null,"SJAG_03551":null,"SJAG_03900":null,"SJAG_04003":null,"SJAG_04840":null,"SJAG_04966":null},"genotype_count":0,"is_obsolete":false,"name":"extrapyramidal and movement disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:G20-G26","ICD9:333.90","MEDGEN:852565","UMLS:C0477355","DOID:13839"],"termid":"MONDO:0001815","terms_by_termid":{"MONDO:0007493":null,"MONDO:0007495":null,"MONDO:0010334":null,"MONDO:0010747":null,"MONDO:0012994":null,"MONDO:0014557":null,"MONDO:0014889":null,"MONDO:0015003":null,"MONDO:0025691":null,"MONDO:0030486":null,"MONDO:0030513":null,"MONDO:0030676":null,"MONDO:0030958":null,"MONDO:0957385":null},"xrefs":{"Monarch":{"xref_id":"0001815"}}}


id: MONDO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic and progressive inflammatory process that affects the glans penis and the foreskin. It presents with white atrophic patches in the glans of penis and foreskin and it is often associated with the development of a sclerotic, whitish ring in the tip of the foreskin that may lead to phimosis. It is also known as lichen sclerosus of the penis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balanitis","termid":"MONDO:0006672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanitis xerotica obliterans","secondary_identifiers":["UMLS:C0152460","NCIT:C3523","MESH:D052798","DOID:13477","ICD9:607.81","MEDGEN:57542","SCTID:198033005"],"synonyms":[{"name":"lichen Sclerosus of penis","type":"exact"},{"name":"lichen Sclerosus of the penis","type":"exact"},{"name":"penile lichen Sclerosus","type":"exact"}],"termid":"MONDO:0001725","xrefs":{"Monarch":{"xref_id":"0001725"}}}


id: GO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels.","definition_xrefs":["PMID:8974333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GABA-A receptor activity","synonyms":[{"name":"ionotropic GABA receptor activity","type":"exact"}],"termid":"GO:0004890"}


id: MONDO:0011565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"metabolic syndrome X","secondary_identifiers":["SCTID:237602007","MEDGEN:1640883","UMLS:C4552048","MESH:D024821","DOID:14221","OMIM:605552","ICD9:277.7"],"synonyms":[{"name":"AOMS1","type":"related"},{"name":"abdominal obesity metabolic syndrome","type":"related"},{"name":"abdominal obesity-metabolic syndrome 1","type":"exact"},{"name":"abdominal obesity-metabolic syndrome quantitative trait locus 1","type":"related"},{"name":"dysmetabolic syndrome X","type":"exact"},{"name":"metabolic syndrome 10","type":"related"},{"name":"metabolic syndrome type X","type":"exact"},{"name":"metabolic syndrome, protection against","type":"related"}],"termid":"MONDO:0011565","xrefs":{"Monarch":{"xref_id":"0011565"}}}


id: PBO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-1","termid":"PBO:0075038"}


id: MONDO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limiting, rapidly growing, non-encapsulated benign neoplasm that arises from the soft tissues. It is characterized by the presence of plump spindle-shaped fibroblasts, multinucleated osteoclast-like giant cells, chronic inflammatory infiltrate, red blood cell extravasation, and high mitotic activity.","definition_xrefs":["NCIT:C3827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"},{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular fasciitis","secondary_identifiers":["icd11.foundation:789101380","UMLS:C0410005","DOID:7327","Orphanet:477742","ICD9:728.79","GARD:21959","MEDGEN:96076","SCTID:400138001","ICD10CM:M72.4"],"synonyms":[{"name":"fasciitis - nodular","type":"exact"},{"name":"nodular fasciitis","type":"exact"},{"name":"pseudosarcomatous fasciitis","type":"exact"},{"name":"pseudosarcomatous fibromatosis","type":"exact"}],"termid":"MONDO:0004187","xrefs":{"Monarch":{"xref_id":"0004187"}}}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: GO:0140924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-kynurenine across a membrane.","definition_xrefs":["PMID:35245456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-kynurenine transmembrane transport","termid":"GO:0140924"}


id: MONDO:0035328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder due to poisoning (obsolete MONDO:0035328)","secondary_identifiers":["Orphanet:556508"],"termid":"MONDO:0035328","xrefs":{"Monarch":{"xref_id":"0035328"}}}


id: MONDO:0002973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the presence of malignant large epithelioid melanocytes.","definition_xrefs":["NCIT:C4236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid cell melanoma","secondary_identifiers":["DOID:4360","ICDO:8771/3","UMLS:C0334443","MEDGEN:137763"],"synonyms":[{"name":"epithelioid cell malignant melanoma","type":"exact"},{"name":"epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma (morphologic abnormality)","type":"exact"},{"name":"epithelioid melanoma","type":"exact"}],"termid":"MONDO:0002973","xrefs":{"Monarch":{"xref_id":"0002973"}}}


id: GO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the atrioventricular valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve formation","synonyms":[{"name":"AV valve formation","type":"exact"}],"termid":"GO:0003190"}


id: PBO:0058768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6892","termid":"PBO:0058768"}


id: PBO:0111439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit Vtc4","termid":"PBO:0111439"}


id: PBO:0069651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 928, pseudogene","termid":"PBO:0069651"}


id: MONDO:0010786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic diarrhea with villous atrophy is a rare, genetic gastroenterological disease characterized by the early onset of chronic diarrhea, vomiting, anorexia, lactic acidosis, renal insufficiency and hepatic involvement (mild elevation of liver enzymes, steatosis, hepatomegaly). Partial villous atrophy (with eosinophilic infiltration) is observed on intestinal biopsy. Although diarrhea may resolve, the development of neurologic symptoms (cerebellar ataxia, sensorineural deafness, seizures), retinitis pigmentosa and muscle weakness may complicate disease course and lead to death. There have been no further descriptions in the literature since 1994.","definition_xrefs":["Orphanet:1670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0004069"],"is_obsolete":false,"name":"chronic diarrhea with villous atrophy","secondary_identifiers":["UMLS:C1838912","MESH:C564019","MEDGEN:325129","GARD:16576","ICD10CM:K59.1","OMIM:520100"],"synonyms":[{"name":"diarrhea, chronic, with villous atrophy","type":"related"}],"termid":"MONDO:0010786","xrefs":{"Monarch":{"xref_id":"0010786"}}}


id: GO:0050834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of molybdenum into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide (obsolete GO:0050834)","termid":"GO:0050834"}


id: FYPO:0001411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular sulfide level","synonyms":[{"name":"abnormal cellular sulfide accumulation","type":"related"},{"name":"abnormal cellular sulfide level","type":"exact"},{"name":"altered cellular acid labile sulfide level","type":"exact"},{"name":"altered cellular sulfide ion level","type":"exact"},{"name":"altered cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"altered cellular sulfide level during vegetative growth","type":"exact"},{"name":"altered cellular sulphide level","type":"exact"}],"termid":"FYPO:0001411"}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: PBO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030828"}


id: GO:2001172
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98499],"is_not":false,"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"positively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ethanol fermentation","type":"exact"},{"name":"positive regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001172","terms_by_termid":{"GO:2001172":null}}


id: GO:0010599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional long small interfering RNA (lsiRNA). lsiRNAs are class of siRNAs 30 to 40 nt in length. lsiRNAs are induced by pathogen infection or under specific growth conditions.","definition_xrefs":["PMID:18003861","PMID:20687832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siRNA processing","termid":"GO:0030422"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"lsiRNA processing","synonyms":[{"name":"RNA interference, production of lsiRNA","type":"exact"},{"name":"primary lsiRNA processing","type":"exact"},{"name":"production of lsiRNA involved in RNA interference","type":"related"}],"termid":"GO:0010599"}


id: PBO:0070085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 42, pseudogene","termid":"PBO:0070085"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["GOC:bc","PMID:20935643","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: PBO:0012845
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens SHFM1","termid":"PBO:0012845"}


id: GO:0102508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3,7-di-O-beta-D-glucoside betaine + H2O = cyanidin 3-O-beta-D-glucoside betaine + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3,7-diglucoside glucosidase activity (obsolete GO:0102508)","termid":"GO:0102508"}


id: PBO:0085270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal cystathionine beta-lyase; converts cystathionine into homocysteine; may be redox regulated by Gto1p; involved in the release of the aromatic thiol 3-mercaptohexanol during wine fermentation","termid":"PBO:0085270"}


id: GO:0032615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-12 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-12 production","secondary_identifiers":["GO:0042090","GO:0072610"],"synonyms":[{"name":"CLMF production","type":"narrow"},{"name":"IL-12 production","type":"exact"},{"name":"NKSF production","type":"narrow"},{"name":"interleukin-12 biosynthetic process","type":"narrow"},{"name":"interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032615"}


id: GO:1903008
data:
  {"annotated_genes":["SJAG_05000","SJAG_03232","SJAG_04283","SJAG_02096","SJAG_03189","SJAG_04862","SJAG_03106","SJAG_03345","SJAG_01074","SJAG_00188","SJAG_01497","SJAG_00898","SJAG_03428","SJAG_02746"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[77389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[78401,107602,77130,71597,105080,65367,118110,79985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[106665,72562,76312,105561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032790"}]},"cv_name":"biological_process","definition":"The disaggregation of an organelle into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03345":null,"SJAG_03428":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"organelle degradation","type":"exact"}],"termid":"GO:1903008","terms_by_termid":{"GO:0032790":null,"GO:0051228":null,"GO:0072344":null,"GO:0140708":null}}


id: MONDO:0008441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia with associated extrapyramidal signs","secondary_identifiers":["MESH:C566681","OMIM:182800","MEDGEN:355815","UMLS:C1866852"],"synonyms":[{"name":"spastic paraplegia with associated extrapyramidal signs","type":"exact"}],"termid":"MONDO:0008441","xrefs":{"Monarch":{"xref_id":"0008441"}}}


id: PBO:0050317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 19","termid":"PBO:0050317"}


id: MONDO:0033533
data:
  {"annotated_genes":["SJAG_05218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87201],"is_not":false,"summary":null,"term":"MONDO:0033533"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05218":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 45","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112113","MEDGEN:1731010","OMIM:618951","UMLS:C5436461"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 45","type":"related"},{"name":"COXPD45","type":"related"}],"termid":"MONDO:0033533","terms_by_termid":{"MONDO:0033533":null},"xrefs":{"Monarch":{"xref_id":"0033533"}}}


id: MONDO:0000065
data:
  {"annotated_genes":["SJAG_03303"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012970"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03303":null},"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:603933"],"synonyms":[{"name":"microvascular complications of diabetes","type":"exact"}],"termid":"MONDO:0000065","terms_by_termid":{"MONDO:0012970":null},"xrefs":{"Monarch":{"xref_id":"0000065"}}}


id: PBO:0058769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6893","termid":"PBO:0058769"}


id: GO:0030773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxymellein + S-adenosyl-L-methionine = 6-methoxymellein + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.108","RHEA:15201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"6-hydroxymellein O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03934","MetaCyc:6-HYDROXYMELLEIN-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"6-hydroxymellein methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:6-hydroxymellein 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030773"}


id: PBO:0002886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Ctf8 (predicted)","termid":"PBO:0002886"}


id: GO:0043248
data:
  {"annotated_genes":["SJAG_04602","SJAG_00954","SJAG_00126","SJAG_02570","SJAG_01652","SJAG_04290","SJAG_04197","SJAG_04844"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58625,59670,63225,106295],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[116866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080129"},{"annotations":[117759,81886,101412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["GOC:go_curators","PMID:10872471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00954":null,"SJAG_01652":null,"SJAG_02570":null,"SJAG_04197":null,"SJAG_04290":null,"SJAG_04602":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"proteasome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9907900"],"synonyms":[{"name":"26S proteasome assembly","type":"narrow"},{"name":"proteasome complex assembly","type":"exact"},{"name":"proteasome maturation","type":"exact"}],"termid":"GO:0043248","terms_by_termid":{"GO:0043248":null,"GO:0070682":null,"GO:0080129":null}}


id: MONDO:0010324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 81","secondary_identifiers":["UMLS:C1845531","DOID:0112033","GARD:22676","MEDGEN:335203","OMIM:300433","MESH:C564515"],"synonyms":[{"name":"MRX81","type":"exact"},{"name":"intellectual disability, X-linked 81","type":"exact"},{"name":"mental retardation, X-linked 81","type":"related"},{"name":"mental retardation, X-linked 81, X-linked recessive","type":"exact"}],"termid":"MONDO:0010324","xrefs":{"Monarch":{"xref_id":"0010324"}}}


id: MONDO:0002146
data:
  {"annotated_genes":["SJAG_03051","SJAG_03077","SJAG_02829","SJAG_04148","SJAG_00301","SJAG_04398","SJAG_04110","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[88719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[88808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[88543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"A disorder characterized by decreased function of the gonads. Clinical manifestations in both males and females include poor libido, infertility, and osteoporosis. Additional signs in males include erectile dysfunction, muscle atrophy, gynecomastia and increased abdominal fat. In females, additional signs include shrinking of the breasts and loss of, or failure to develop menstruation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_04110":null,"SJAG_04148":null,"SJAG_04398":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0020619","DOID:1924","ICD9:253.4","NCIT:C9227","SCTID:48130008","MEDGEN:5711","MESH:D007006"],"synonyms":[{"name":"gonadotropin deficiency","type":"exact"},{"name":"hypogonadotropism","type":"exact"}],"termid":"MONDO:0002146","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013689":null,"MONDO:0014497":null,"MONDO:0030736":null,"MONDO:0054850":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0002146"}}}


id: GO:0043539
data:
  {"annotated_genes":["SJAG_00457","SJAG_04666","SJAG_01401","SJAG_00142","SJAG_04502","SJAG_04614","SJAG_04509","SJAG_01213","SJAG_03340","SJAG_03453","SJAG_04140","SJAG_02057","SJAG_03371","SJAG_03699","SJAG_03090","SJAG_00333","SJAG_03618","SJAG_00439","SJAG_03695","SJAG_00424","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70565,77230,77235,89772,91113,91321,92741,93077,94324,107091,111262,112542,120418],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[72020,67346,75838,103571,113206,114977,119104,81613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein serine/threonine kinase.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_02605":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein ser/thr kinase activator activity","type":"exact"}],"termid":"GO:0043539","terms_by_termid":{"GO:0043539":null,"GO:0061575":null}}


id: GO:0018523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quinoline + acceptor + H2O = isoquinolin-1(2H)-one + reduced acceptor.","definition_xrefs":["EC:1.3.99.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"quinoline 2-oxidoreductase activity","secondary_identifiers":["RHEA:17749","MetaCyc:1.3.99.17-RXN","UM-BBD_reactionID:r0045"],"synonyms":[{"name":"quinoline:acceptor 2-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0018523"}


id: PBO:0054445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1842","termid":"PBO:0054445"}


id: PBO:0058320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4693","termid":"PBO:0058320"}


id: PBO:0044548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein 3 pseudogene 2","termid":"PBO:0044548"}


id: GO:0102482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-deoxy-D-glucuronate = 5-dehydro-2-deoxy-D-gluconate.","definition_xrefs":["GOC:pz","RHEA:25840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"5-deoxy-D-glucuronate isomerase activity","secondary_identifiers":["EC:5.3.1.30","MetaCyc:RXN-14150"],"termid":"GO:0102482"}


id: GO:0032527
data:
  {"annotated_genes":["SJAG_03345","SJAG_03907","SJAG_00530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74774],"is_not":false,"summary":null,"term":"GO:0032527"},{"annotations":[80896,77388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null,"SJAG_03907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein exit from endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein exit from ER","type":"exact"},{"name":"protein export from ER","type":"exact"},{"name":"protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0032527","terms_by_termid":{"GO:0030970":null,"GO:0032527":null}}


id: PR:O13722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf12 gene.","definition_xrefs":["UniProtKB:O13722","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.02","synonyms":[{"name":"Spom972h-taf12","type":"exact"},{"name":"TBP-associated factor 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13722"}


id: GO:1901985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein acetylation.","definition_xrefs":["PMID:22117195","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"positively_regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein acetylation","synonyms":[{"name":"activation of protein acetylation","type":"narrow"},{"name":"activation of protein amino acid acetylation","type":"narrow"},{"name":"positive regulation of protein amino acid acetylation","type":"exact"},{"name":"up regulation of protein acetylation","type":"exact"},{"name":"up regulation of protein amino acid acetylation","type":"exact"},{"name":"up-regulation of protein acetylation","type":"exact"},{"name":"up-regulation of protein amino acid acetylation","type":"exact"},{"name":"upregulation of protein acetylation","type":"exact"},{"name":"upregulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901985"}


id: PBO:0031224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_spindle_microtubules_to_kinetochore_involved_in_homologous_chromosome_segregation","termid":"PBO:0031224"}


id: GO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of colanic acid, a capsular bacterial polysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"colanic acid metabolic process","termid":"GO:0046377"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colanic acid biosynthetic process","secondary_identifiers":["MetaCyc:COLANSYN-PWY"],"synonyms":[{"name":"M antigen biosynthesis","type":"exact"},{"name":"M antigen biosynthetic process","type":"exact"},{"name":"colanic acid anabolism","type":"exact"},{"name":"colanic acid biosynthesis","type":"exact"},{"name":"colanic acid formation","type":"exact"},{"name":"colanic acid synthesis","type":"exact"}],"termid":"GO:0009242"}


id: PBO:0040461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A3 divergent transcript","termid":"PBO:0040461"}


id: PBO:0056187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A1","termid":"PBO:0056187"}


id: GO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgA isotypes","synonyms":[{"name":"down regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgA isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgA isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"negative regulation of class switching to IgA isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048297"}


id: PBO:0075685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S1 RNA binding domain 1","termid":"PBO:0075685"}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: PBO:0072449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 13","termid":"PBO:0072449"}


id: PBO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine 3-monooxygenase","termid":"PBO:0052560"}


id: GO:0007385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the abdominal segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, trunk","termid":"GO:0035292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, abdomen","termid":"GO:0007385"}


id: PBO:0049422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GULP PTB domain containing engulfment adaptor 1","termid":"PBO:0049422"}


id: PBO:0056555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM3AP antisense RNA 1","termid":"PBO:0056555"}


id: FYPO:0002529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm","synonyms":[{"name":"abnormal protein localisation to nucleoplasm","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002529"}


id: RO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"RO:0002018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","termid":"RO:0002017"}


id: MONDO:0013511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanosis, transient neonatal","secondary_identifiers":["MEDGEN:462771","OMIM:613977","UMLS:C3151421"],"synonyms":[{"name":"TNCY","type":"related"},{"name":"cyanosis, transient neonatal","type":"exact"}],"termid":"MONDO:0013511","xrefs":{"Monarch":{"xref_id":"0013511"}}}


id: PBO:0043716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 4","termid":"PBO:0043716"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: MONDO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to perceive facial expression, body language and intonation, rendering them unable to non-verbally perceive people's emotions and limiting that aspect of social interaction.","definition_xrefs":["DOID:0060149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social emotional agnosia","synonyms":[{"name":"expressive agnosia","type":"exact"}],"termid":"MONDO:0000679","xrefs":{"Monarch":{"xref_id":"0000679"}}}


id: GO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"},{"relation_name":"negatively_regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061106"}


id: FYPO:0008205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nucleus during hypoxia","termid":"FYPO:0008205"}


id: MONDO:1011592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, horse","secondary_identifiers":["OMIA:000817-9796"],"termid":"MONDO:1011592","xrefs":{"Monarch":{"xref_id":"1011592"}}}


id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: MONDO:0030362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type I interferonopathy characterized by severe developmental delay and progressive neurologic deterioration. Patients present in infancy with irritability and spasticity. Brain imaging shows diffusely abnormal white matter, cerebral atrophy, and intracranial calcification. Premature death has been associated with renal and/or hepatic failure.","definition_xrefs":["PMID:33230297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"RNU7-1-related type 1 interferonopathy","termid":"MONDO:0700263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 9","secondary_identifiers":["OMIM:619487","UMLS:C5561966","MEDGEN:1794176"],"synonyms":[{"name":"AGS9","type":"exact"},{"name":"Aicardi-Goutieres syndrome 9","type":"exact"}],"termid":"MONDO:0030362","xrefs":{"Monarch":{"xref_id":"0030362"}}}


id: PBO:0013117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl6","termid":"PBO:0013117"}


id: GO:0031756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-3 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Edg-3 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-3 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031756"}


id: GO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Epidermal Growth Factor (EGF) repeats.","definition_xrefs":["GOC:dph","PMID:25155514","GOC:25700513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"EGF repeat binding","synonyms":[{"name":"Epidermal Growth Factor repeat binding","type":"related"},{"name":"Epidermal growth factor domain binding","type":"broad"}],"termid":"GO:0061788"}


id: MONDO:0019571
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87830,87831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"}]},"cv_name":"mondo","definition":"Autosomal dominant cutis laxa (ADCL) is a connective tissue disorder characterized by wrinkled, redundant and sagging inelastic skin associated in some cases with internal organ involvement.","definition_xrefs":["Orphanet:90348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant cutis laxa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1639","MESH:C562627","MEDGEN:120630","SCTID:111388003","DOID:0070142","icd11.foundation:720393698","UMLS:C0268350"],"synonyms":[{"name":"ADCL","type":"exact"},{"name":"cutis laxa, autosomal dominant","type":"exact"}],"termid":"MONDO:0019571","terms_by_termid":{"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0019571"}}}


id: FYPO:0005148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is increased. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["PomBase:mah","GO:0034399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nuclear periphery","synonyms":[{"name":"increased protein localisation to nuclear periphery","type":"exact"},{"name":"increased protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005148"}


id: PR:G2TRU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.14 gene.","definition_xrefs":["UniProtKB:G2TRU2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1672.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.14","synonyms":[{"name":"Spom972h-SPCC1672.14","type":"exact"}],"termid":"PR:G2TRU2"}


id: MONDO:1012442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanoma, non-human animal","termid":"MONDO:1011821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, dog","secondary_identifiers":["OMIA:001724-9615"],"termid":"MONDO:1012442","xrefs":{"Monarch":{"xref_id":"1012442"}}}


id: PBO:0077521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 236","termid":"PBO:0077521"}


id: PBO:0055397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2827","termid":"PBO:0055397"}


id: GO:0032217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of riboflavin from one side of a membrane to the other. Riboflavin (vitamin B2) is a water-soluble B-complex vitamin, converted in the cell to FMN and FAD, cofactors required for the function of flavoproteins.","definition_xrefs":["GOC:rn","PMID:16204239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"riboflavin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-3165230"],"synonyms":[{"name":"riboflavin transporter activity","type":"related"}],"termid":"GO:0032217"}


id: GO:0098524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a somatic muscle myotube, such as an arthropod somatic muscle cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction of myotube","termid":"GO:0098523"},{"relation_name":"is_a","term_name":"neuromuscular junction of somatic muscle","termid":"GO:0098527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of somatic muscle myotube","termid":"GO:0098524"}


id: GO:0019288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["MetaCyc:NONMEVIPP-PWY","GOC:go_curators","PMID:18948055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process","termid":"GO:0009240"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, MEP pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthesis","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthetic process","type":"exact"},{"name":"non-MVA pathway","type":"exact"}],"termid":"GO:0019288"}


id: PATO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000398 vigorous (obsolete PATO:0000398)","termid":"PATO:0000398"}


id: GO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with the ends of intermediate filaments and couple the intermediate filaments to the plasma membrane.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type III intermediate filament associated protein (obsolete GO:0001724)","synonyms":[{"name":"type III intermediate filament associated protein","type":"exact"}],"termid":"GO:0001724"}


id: PBO:0073589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 1","termid":"PBO:0073589"}


id: RO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of is evidence for","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_evidence","termid":"RO:0002558"}


id: GO:0061883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A clathrin-mediated endocytosis process whereby yolk proteins are internalized and trafficked through the endocytic pathway for yolk deposition.","definition_xrefs":["PMID:26265702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"},{"relation_name":"part_of","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"clathrin-dependent endocytosis involved in vitellogenesis","synonyms":[{"name":"clathrin-dependent endocytosis involved in yolk formation","type":"exact"}],"termid":"GO:0061883"}


id: PBO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-U ortholog Mis17","termid":"PBO:0025517"}


id: GO:0015532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alpha-ketoglutarate(out) + H+(out) = alpha-ketoglutarate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"alpha-ketoglutarate:proton symporter activity","synonyms":[{"name":"2-oxoglutarate:hydrogen symporter activity","type":"exact"},{"name":"2-oxoglutarate:proton symporter activity","type":"exact"},{"name":"alpha-ketoglutarate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015532"}


id: PBO:0074576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 32","termid":"PBO:0074576"}


id: PBO:0074206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 14","termid":"PBO:0074206"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: MONDO:0007167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atelosteogenesis I is a perinatally lethal skeletal dysplasia characterized by severe short-limbed dwarfism, joint dislocations, club feet along with distinctive facies and radiographic findings.","definition_xrefs":["Orphanet:1190"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis type I","secondary_identifiers":["SCTID:725141006","MEDGEN:82701","UMLS:C0265283","GARD:9287","icd11.foundation:449799342","OMIM:108720","MESH:C535396"],"synonyms":[{"name":"AO1","type":"exact"},{"name":"AOI","type":"exact"},{"name":"atelosteogenesis type 1","type":"exact"},{"name":"atelosteogenesis, type 1","type":"related"},{"name":"atelosteogenesis, type I","type":"related"},{"name":"giant cell chondrodysplasia","type":"exact"},{"name":"spondylo-humero-femoral dysplasia","type":"exact"},{"name":"spondylohumerofemoral hypoplasia","type":"related"}],"termid":"MONDO:0007167","xrefs":{"Monarch":{"xref_id":"0007167"}}}


id: PBO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase involved in pentose catabolism (predicted)","termid":"PBO:0004954"}


id: MONDO:0030703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of vasculitis.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune vasculitis","secondary_identifiers":["DOID:0040097","MEDGEN:730236","UMLS:C1328843","SCTID:427213005"],"termid":"MONDO:0030703","xrefs":{"Monarch":{"xref_id":"0030703"}}}


id: MONDO:0009933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pulmonary lymphangiectasia (PL) is a rare developmental disorder involving the lung and characterized by pulmonary subpleural, interlobar, perivascular, and peribronchial lymphatic dilatation.","definition_xrefs":["Orphanet:2414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"lymphangiectasis","termid":"MONDO:0006840"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"congenital pulmonary lymphangiectasia","secondary_identifiers":["SCTID:45142002","UMLS:C1849554","icd11.foundation:2069435755","OMIM:265300","MEDGEN:340355","MESH:C537727","NCIT:C99034","NORD:1054","GARD:9900"],"synonyms":[{"name":"CPL","type":"related"},{"name":"Diffuse Pulmonary Lymphangiomatosis","type":"exact"},{"name":"congenital pulmonary lymphangiectasis","type":"exact"},{"name":"lymphangiectasia pulmonary congenital","type":"related"},{"name":"lymphangiectasia, pulmonary, congenital","type":"related"},{"name":"lymphangiomatosis pulmonary","type":"related"},{"name":"lymphangiomatosis, pulmonary","type":"related"},{"name":"pulmonary cystic lymphangiectasis","type":"related"},{"name":"pulmonary lymphangiomatosis","type":"exact"}],"termid":"MONDO:0009933","xrefs":{"Monarch":{"xref_id":"0009933"}}}


id: GO:0034124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"regulation ofMyD88-dependent TLR signaling pathway","type":"exact"},{"name":"regulation ofMyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034124"}


id: PBO:0113386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene; overlaps tRNA-Glu/YNCD0021C","termid":"PBO:0113386"}


id: MONDO:1012444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polled and multisystemic syndrome, non-human animal","termid":"MONDO:1011655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polled and multisystemic syndrome, cattle","secondary_identifiers":["OMIA:001736-9913"],"termid":"MONDO:1012444","xrefs":{"Monarch":{"xref_id":"1012444"}}}


id: PBO:0088848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit","termid":"PBO:0088848"}


id: MONDO:0019114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Psychogenic movement disorders (PMD) are movement disorders that cannot be attributed to any known structural or neurochemical diseases, but represent the manifestation of an underlying psychiatric illness or malingering. Most cases of PMD fall in the psychiatric diagnostic category of conversion disorders of the motor subtype.","definition_xrefs":["Orphanet:71519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychogenic movement disorders","secondary_identifiers":["MedDRA:10072376","MEDGEN:155722","icd11.foundation:1905355308","GARD:18914","UMLS:C0752208"],"synonyms":[{"name":"psychogenic dystonia","type":"exact"}],"termid":"MONDO:0019114","xrefs":{"Monarch":{"xref_id":"0019114"}}}


id: MONDO:0013577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of adipose tissue characterized by symmetric and bilateral enlargement of the lower extremities due to abnormal deposition of subcutaneous fat often in obese women. It is associated with hematoma, pain and may progress to secondary lymphedema which is known as lipolymphedema.","definition_xrefs":["MESH:D065134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipedema","secondary_identifiers":["Orphanet:77243","HP:0100695","MedDRA:10063955","MEDGEN:451048","OMIM:614103","SCTID:234102003","UMLS:C0398370"],"synonyms":[{"name":"Lipedema (disease)","type":"exact"},{"name":"lipedema","type":"exact"}],"termid":"MONDO:0013577","xrefs":{"Monarch":{"xref_id":"0013577"}}}


id: MONDO:0019238
data:
  {"annotated_genes":["SJAG_00694","SJAG_00964","SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014647"},{"annotations":[87073,87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","definition":"ANPM","definition_xrefs":["Orphanet:79193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of purine or pyrimidine metabolism","termid":"MONDO:0019254"},{"relation_name":"is_a","term_name":"pyrimidine metabolism disease","termid":"MONDO:0037937"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"inborn disorder of pyrimidine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18967","icd11.foundation:771608363","DOID:0050832","MedDRA:10070969","MEDGEN:541208","UMLS:C0268127"],"synonyms":[{"name":"disorder of pyrimidine metabolism","type":"related"},{"name":"inborn error of pyrimidine nucleobase metabolic process","type":"exact"},{"name":"inborn pyrimidine nucleobase metabolic process disorder","type":"exact"},{"name":"pyrimidine metabolic disorder","type":"exact"},{"name":"rare inborn error of pyrimidine nucleobase metabolic process","type":"exact"}],"termid":"MONDO:0019238","terms_by_termid":{"MONDO:0009797":null,"MONDO:0014647":null},"xrefs":{"Monarch":{"xref_id":"0019238"}}}


id: GO:0030455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transducing mating pheromone signal in a fungus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Fungi) (obsolete GO:0030455)","synonyms":[{"name":"MAPKKK cascade (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030455"}


id: GO:1904237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["PMID:25834989","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"positively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"activation of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"activation of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"positive regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904237"}


id: GO:0036293
data:
  {"annotated_genes":["SJAG_00642","SJAG_03345","SJAG_00221","SJAG_04018","SJAG_01150","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111842,113713,103162,119014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[91141,118413],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036293","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: PBO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9","termid":"PBO:0044063"}


id: PBO:0031117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nuclear_protein_level_during_vegetative_growth","termid":"PBO:0031117"}


id: MONDO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7p deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the short arm (p) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 7p deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 7","termid":"MONDO:0016872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 7","secondary_identifiers":["Orphanet:261911","UMLS:C5679668","GARD:1346","icd11.foundation:1523142467","MEDGEN:1826021"],"synonyms":[{"name":"7p deletion","type":"related"},{"name":"7p monosomy","type":"related"},{"name":"chromosome 7p deletion","type":"related"},{"name":"deletion 7p","type":"related"},{"name":"monosomy 7p","type":"related"},{"name":"partial deletion of chromosome 7p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 7","type":"exact"},{"name":"partial monosomy 7p","type":"related"},{"name":"partial monosomy of chromosome 7p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 7","type":"exact"}],"termid":"MONDO:0016889","xrefs":{"Monarch":{"xref_id":"0016889"}}}


id: GO:2001138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipid transport","termid":"GO:2001138"}


id: GO:0006930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell.","definition_xrefs":["PMID:11944043","PMID:14657486","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell extension","synonyms":[{"name":"substrate-bound cell migration, cell extension","type":"exact"}],"termid":"GO:0006930"}


id: MONDO:0018463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild phosphoribosylpyrophosphate (PRPP) synthetase superactivity is the mild and late-onset form of PRPP synthetase superactivity, an X-linked disorder of purine metabolism associated with hyperuricemia and hyperuricosuria, leading to urolithiasis and gout. This form is not associated with any neuropathy or central nervous system (CNS) disorders.","definition_xrefs":["Orphanet:411536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoribosylpyrophosphate synthetase superactivity","termid":"MONDO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"mild phosphoribosylpyrophosphate synthetase superactivity","secondary_identifiers":["GARD:17681","UMLS:C5680016","MEDGEN:1843112"],"synonyms":[{"name":"mild PRPP synthetase superactivity","type":"exact"},{"name":"mild PRPS1 superactivity","type":"exact"}],"termid":"MONDO:0018463","xrefs":{"Monarch":{"xref_id":"0018463"}}}


id: PBO:0072918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class F member 1","termid":"PBO:0072918"}


id: PBO:0040658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 2","termid":"PBO:0040658"}


id: PBO:0053685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 877","termid":"PBO:0053685"}


id: PBO:0116709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 3 (gene/pseudogene)","termid":"PBO:0116709"}


id: GO:0035564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney size","termid":"GO:0035564"}


id: MONDO:0019294
data:
  {"annotated_genes":["SJAG_03846","SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007145"},{"annotations":[87791,87792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_03846":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mixed dermis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842502","UMLS:C5681484","Orphanet:79380"],"termid":"MONDO:0019294","terms_by_termid":{"MONDO:0007145":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0019294"}}}


id: MONDO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"idiopathic progressive polyneuropathy","secondary_identifiers":["MEDGEN:509646","DOID:10593","UMLS:C0154756","ICD9:356.4","SCTID:33209009"],"termid":"MONDO:0001073","xrefs":{"Monarch":{"xref_id":"0001073"}}}


id: PBO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2/M_phase_transition","termid":"PBO:0031796"}


id: PBO:0084325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin, responsible for nuclear import of specific proteins; cargoes include Spt15p, Sua7p, histones H2A and H2B, and Nap1p; amino terminus shows similarity to those of other importins, particularly Cse1p; localization is primarily nuclear; function is regulated by sumoylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0084325"}


id: PBO:0070022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1319, pseudogene","termid":"PBO:0070022"}


id: GO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ITP, inosine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate catabolic process","termid":"GO:0009207"},{"relation_name":"is_a","term_name":"ITP metabolic process","termid":"GO:0046041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ITP catabolic process","synonyms":[{"name":"ITP breakdown","type":"exact"},{"name":"ITP catabolism","type":"exact"},{"name":"ITP degradation","type":"exact"},{"name":"ITP hydrolysis","type":"exact"}],"termid":"GO:0006193"}


id: PBO:0087011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease H2 subunit; required for RNase H2 activity; role in ribonucleotide excision repair; related to human AGS2 that causes Aicardi-Goutieres syndrome","termid":"PBO:0087011"}


id: PBO:0091435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha/Beta hydrolase fold, DUF1749 family protein","termid":"PBO:0091435"}


id: GO:0045020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. DNA repair pathways that tend to increase the endogenous mutation rate.","definition_xrefs":["PMID:11459974","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete error-prone DNA repair (obsolete GO:0045020)","synonyms":[{"name":"error-prone DNA repair","type":"exact"},{"name":"mutagenic DNA repair","type":"exact"}],"termid":"GO:0045020"}


id: MONDO:1011912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal nephropathy, non-human animal","secondary_identifiers":["OMIA:000860"],"termid":"MONDO:1011912","xrefs":{"Monarch":{"xref_id":"1011912"}}}


id: PBO:0076815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 2","termid":"PBO:0076815"}


id: PBO:0063799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain interacting protein","termid":"PBO:0063799"}


id: PBO:0065705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 3","termid":"PBO:0065705"}


id: FYPO:0002296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which the colony spreads laterally to a lesser extent, and grows vertically to a greater extent, resulting in a more conical shape, than a wild-type colony.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"cone-shaped colony morphology","synonyms":[{"name":"piled-up colony morphology","type":"exact"}],"termid":"FYPO:0002296"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["ISBN:0781735149","PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: PBO:0110114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog, kelch repeat, expressed during meiotic cell cycle, implicated in actin cytoskeletal processes","termid":"PBO:0110114"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: GO:0052777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diacetylchitobiose into simpler products.","definition_xrefs":["PMID:22797760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacetylchitobiose metabolic process","termid":"GO:0052778"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diacetylchitobiose catabolic process","synonyms":[{"name":"diacetylchitobiose catabolism","type":"exact"}],"termid":"GO:0052777"}


id: PBO:0082032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17-kDa component of the U4/U6aU5 tri-snRNP; plays an essential role in pre-mRNA splicing; human ortholog TXNL4A (the human U5-specific 15-kDa protein) complements yeast dib1 null mutant","termid":"PBO:0082032"}


id: FYPO:0005153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells in an originally homothallic (h90) population express M-specific information from the mat1 locus.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased number of heterothallic h- cells","synonyms":[{"name":"increased amount of heterothallic H- cells","type":"exact"}],"termid":"FYPO:0005153"}


id: GO:0050370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyrosine + O2 + NADPH + H+ = N-hydroxytyrosine + NADP+ + H2O.","definition_xrefs":["MetaCyc:TYROSINE-N-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine N-monooxygenase activity","secondary_identifiers":["RHEA:22464"],"synonyms":[{"name":"CYP79A1 activity","type":"narrow"},{"name":"L-tyrosine,NADPH:oxygen oxidoreductase (N-hydroxylating)","type":"exact"},{"name":"tyrosine N-hydroxylase activity","type":"exact"}],"termid":"GO:0050370"}


id: PBO:0045270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 17","termid":"PBO:0045270"}


id: GO:0007190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme adenylate cyclase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adenylate cyclase activity","termid":"GO:0045762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of adenylate cyclase activity","secondary_identifiers":["Reactome:R-HSA-187024"],"synonyms":[{"name":"adenylate cyclase activation","type":"exact"},{"name":"adenylate cyclase activator","type":"related"},{"name":"adenylyl cyclase activation","type":"exact"}],"termid":"GO:0007190"}


