# terms

id: GO:0021623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the oculomotor nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"oculomotor nerve morphogenesis","termid":"GO:0021622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve formation","synonyms":[{"name":"CN III biosynthesis","type":"related"},{"name":"CN III formation","type":"related"}],"termid":"GO:0021623"}


id: PBO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 16","termid":"PBO:0048095"}


id: PBO:0084878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; PET123 exhibits genetic interactions with PET122, which encodes a COX3 mRNA-specific translational activator","termid":"PBO:0084878"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: GO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + UDP-D-glucose = 5'-O-beta-D-glucosylpyridoxine + H+ + UDP.","definition_xrefs":["RHEA:20177","EC:2.4.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"pyridoxine 5'-O-beta-D-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01912","MetaCyc:2.4.1.160-RXN"],"synonyms":[{"name":"UDP-glucose-pyridoxine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pyridoxine 5'-O-beta-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:pyridoxine 5'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-pyridoxine 5'-beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047231"}


id: GO:0034333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:bc","GOC:aruk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"adherens junction assembly","synonyms":[{"name":"adherens junction formation","type":"exact"}],"termid":"GO:0034333"}


id: PBO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in glucose uptake","termid":"PBO:0000449"}


id: PBO:0063921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3IP1 divergent transcript","termid":"PBO:0063921"}


id: PBO:0064814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 5","termid":"PBO:0064814"}


id: PBO:0038806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 10","termid":"PBO:0038806"}


id: PBO:0075719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRI antisense RNA 1","termid":"PBO:0075719"}


id: PBO:0048740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 2","termid":"PBO:0048740"}


id: PBO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_cellular_hyperosmotic_response","termid":"PBO:0030355"}


id: PBO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi-mediated heterochromatin assembly helicase Hrr1","termid":"PBO:0090011"}


id: PBO:0089153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16","termid":"PBO:0089153"}


id: PBO:0080371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VOPP1 divergent transcript","termid":"PBO:0080371"}


id: PBO:0029829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_septated_vegetative_cell_population_(obsolete_FYPO:0002408)","termid":"PBO:0029829"}


id: PR:Q9US40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C1039.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.01","synonyms":[{"name":"Spom972h-SPAC1039.01","type":"exact"}],"termid":"PR:Q9US40"}


id: PR:Q10326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 8 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.01","synonyms":[{"name":"Spom972h-mug8","type":"exact"}],"termid":"PR:Q10326"}


id: MONDO:1010166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactosialidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis, non-human animal","secondary_identifiers":["OMIA:000400"],"termid":"MONDO:1010166","xrefs":{"Monarch":{"xref_id":"1010166"}}}


id: SO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A remnant of an integrated prophage in the host genome or an \\\"island\\\" in the host genome that includes phage like-genes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_prophage","secondary_identifiers":["http://ecoliwiki.net/colipedia/index.php/Category\\:Cryptic_Prophage.w"],"synonyms":[{"name":"cryptic prophage","type":"exact"}],"termid":"SO:0001007"}


id: GO:0010248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ions to establish or maintain an electrochemical gradient across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of transmembrane electrochemical gradient","termid":"GO:0010248"}


id: MONDO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects and ectodermal dysplasia","secondary_identifiers":["MEDGEN:1387409","OMIM:617364","UMLS:C4479250"],"synonyms":[{"name":"CHDED","type":"related"},{"name":"congenital heart defects and ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0044303","xrefs":{"Monarch":{"xref_id":"0044303"}}}


id: GO:0170010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly conserved protein complex that recognises and elicits the rapid degradation of mRNAs in which an amino-acid codon has changed to a nonsense codon; occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["PMID:29282598","GOC:lnp","PMID:9032286","PMID:1569946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nonsense-mediated decay complex","secondary_identifiers":["IntAct:EBI-16420380"],"synonyms":[{"name":"Upf complex","type":"exact"}],"termid":"GO:0170010"}


id: PBO:0046194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELN antisense RNA 1","termid":"PBO:0046194"}


id: PR:O13865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pan3 gene.","definition_xrefs":["UniProtKB:O13865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit pan3-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.04c","synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pan3","type":"exact"}],"termid":"PR:O13865"}


id: PBO:0028006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_contraction","termid":"PBO:0028006"}


id: GO:0022405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organismal process involved in the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"hair cycle","termid":"GO:0042633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair cycle process","termid":"GO:0022405"}


id: FYPO:0006254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of ribosomal footprint lengths in a cell differs from wild type. Ribosomal footprints are RNA fragments protected by the ribosome, and normally range from 28-31 nucleotides long.","definition_xrefs":["PMID:28945192","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ribosome footprint size distribution","synonyms":[{"name":"abnormal ribosome footprint length distribution","type":"exact"},{"name":"abnormal ribosome footprint size distribution during mitotic cell cycle","type":"related"},{"name":"abnormal ribosome footprint size distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006254"}


id: PBO:0083954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin small complex (gamma-TuSC) receptor; recruits the gamma-TuSC complex to the cytoplasmic side of the SPB, connecting nuclear microtubules to the SPB; involved in astral microtubule formation, stabilization, and with Stu2p, anchoring astral MTs at the cytoplasmic face of the SPB, and regulating plus-end MT dynamics; regulated by Cdc5 kinase","termid":"PBO:0083954"}


id: GO:0106237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12R,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["RHEA:41336","PMID:10100631","PMID:11256953","GOC:gap"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 12(R)-lipoxygenase activity","termid":"GO:0106237"}


id: GO:0039628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=169 symmetry. T=169 icosahedral capsid is composed of 12 pentameric and 1680 hexameric capsomeres for a total of 10140 capsid proteins.","definition_xrefs":["GOC:plm","VZ:10117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=169 icosahedral viral capsid","synonyms":[{"name":"T=169 icosahedral capsid","type":"exact"}],"termid":"GO:0039628"}


id: MONDO:0011309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial gestational hyperthyroidism","secondary_identifiers":["SCTID:703309000","ICD9:648.10","Orphanet:99819","OMIM:603373","DOID:0081102","UMLS:C1863959","GARD:16913","MEDGEN:355106","MESH:C566384","icd11.foundation:811229304","ICD9:242.80"],"synonyms":[{"name":"hyperthyroidism, familial gestational","type":"related"}],"termid":"MONDO:0011309","xrefs":{"Monarch":{"xref_id":"0011309"}}}


id: GO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle organ development","termid":"GO:0060538"}


id: PBO:0083687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase I, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression repressed in response to glucose; protein abundance increases in response to DNA replication stress; N-terminally propionylated in vivo; ENO1 has a paralog, ENO2, that arose from the whole genome duplication","termid":"PBO:0083687"}


id: MONDO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the gallbladder, with the bulk of the tumor located at this site.","definition_xrefs":["NCIT:C5734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"},{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder lymphoma","secondary_identifiers":["DOID:8135","UMLS:C1333748","MEDGEN:232224"],"synonyms":[{"name":"gall bladder lymphoma","type":"exact"},{"name":"gallbladder lymphoma","type":"exact"},{"name":"lymphoma of gall bladder","type":"exact"},{"name":"lymphoma of gallbladder","type":"exact"},{"name":"lymphoma of the gallbladder","type":"exact"},{"name":"primary gallbladder lymphoma","type":"exact"}],"termid":"MONDO:0004474","xrefs":{"Monarch":{"xref_id":"0004474"}}}


id: PBO:0117392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRSK1 antisense RNA 1","termid":"PBO:0117392"}


id: PBO:0072640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTCA antisense RNA 1","termid":"PBO:0072640"}


id: PBO:0061443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 2","termid":"PBO:0061443"}


id: MONDO:0016340
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[87061,87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","definition":"An instance of restrictive cardiomyopathy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restrictive cardiomyopathy","termid":"MONDO:0005201"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial restrictive cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:233878008","ICD9:425.4","OMIMPS:115210","UMLS:C0340429","MEDGEN:468561","GARD:20532","Orphanet:217635"],"synonyms":[{"name":"hereditary restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0016340","terms_by_termid":{"MONDO:0009290":null,"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0016340"}}}


id: GO:0010780
data:
  {"annotated_genes":["SJAG_02652","SJAG_05333","SJAG_04303","SJAG_03720","SJAG_00172","SJAG_00100","SJAG_00908","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92217,106842,110733,111637,113128],"is_not":false,"summary":null,"term":"GO:0010780"},{"annotations":[110341,104325],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905263"},{"annotations":[118256],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double-strand breaks are generated at defined hotspots throughout the genome during meiosis I resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00908":null,"SJAG_02652":null,"SJAG_03048":null,"SJAG_03720":null,"SJAG_04303":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0008150","GO:0006259","GO:0140013"],"is_obsolete":false,"name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010780","terms_by_termid":{"GO:0010780":null,"GO:0062209":null,"GO:1905263":null}}


id: PBO:0080809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 5","termid":"PBO:0080809"}


id: GO:0048437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the floral organ over time, from its formation to the mature structure.","definition_xrefs":["GOC:PO_curators","PO:0025395","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ development","secondary_identifiers":["GO:0048433"],"termid":"GO:0048437"}


id: PATO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"arched","termid":"PATO:0001594"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-arched","termid":"PATO:0002162"}


id: GO:0004316
data:
  {"annotated_genes":["SJAG_03198","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58725,99087],"is_not":false,"summary":null,"term":"GO:0004316"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["RHEA:17397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.100","MetaCyc:3-OXOACYL-ACP-REDUCT-RXN","Reactome:R-HSA-8862152"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-acyl-carrier-protein:NADP+ oxidoreductase activity","type":"related"},{"name":"3-ketoacyl acyl carrier protein reductase activity","type":"related"},{"name":"3-oxoacyl-ACP reductase activity","type":"exact"},{"name":"3-oxoacyl-ACPreductase activity","type":"related"},{"name":"3-oxoacyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"3-oxoacyl-acyl-carrier-protein reductase activity","type":"related"},{"name":"NADPH-specific 3-oxoacyl-acylcarrier proteinreductase activity","type":"related"},{"name":"beta-ketoacyl acyl carrier protein (ACP) reductase activity","type":"related"},{"name":"beta-ketoacyl reductase activity","type":"related"},{"name":"beta-ketoacyl thioester reductase activity","type":"related"},{"name":"beta-ketoacyl-ACP reductase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein reductase activity","type":"related"},{"name":"beta-ketoacyl-acyl-carrier protein(ACP) reductase activity","type":"related"}],"termid":"GO:0004316","terms_by_termid":{"GO:0004316":null}}


id: GO:0102701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = tricyclene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"tricyclene synthase activity","secondary_identifiers":["RHEA:32687","MetaCyc:RXN-5121"],"termid":"GO:0102701"}


id: FYPO:0007942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin  loop  formation  during meiotic prophase I results in  chromatin loops of increased length.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin loop formation during meiotic prophase I","termid":"FYPO:0007944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased length of chromatin loops during meiotic prophase I","termid":"FYPO:0007942"}


id: PBO:0087080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L41B; comprises only 25 amino acids; rpl41a rpl41b double null mutant is viable; homologous to mammalian ribosomal protein L41, no bacterial homolog; RPL41B has a paralog, RPL41A, that arose from the whole genome duplication","termid":"PBO:0087080"}


id: GO:0032210
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78831],"is_not":false,"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomere lengthening","termid":"GO:1904356"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"telomere maintenance via telomerase","termid":"GO:0007004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"regulation of telomere maintenance via telomerase","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032210","terms_by_termid":{"GO:0032210":null}}


id: PBO:0072441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 5","termid":"PBO:0072441"}


id: FYPO:0006961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular inosine level","synonyms":[{"name":"increased cellular inosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular inosine level during vegetative growth","type":"exact"},{"name":"increased inosine accumulation","type":"related"}],"termid":"FYPO:0006961"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: PBO:0034366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_in-paralogy_relationship_with","termid":"PBO:0034366"}


id: PBO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.45","termid":"PBO:0002197"}


id: MONDO:0011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Waardenburg's syndrome characterized by pigmentary abnormalities of the hair, skin, and eyes, congenital sensorineural hearing loss, and absence of lateral displacement of the inner canthus of each eye that has material basis in variation in the chromosome region 8p23.","definition_xrefs":["PMID:20127975","DOID:0110951","PMID:11810298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2C","secondary_identifiers":["MEDGEN:335755","OMIM:606662","UMLS:C1847722","MESH:C564684","GARD:15396"],"synonyms":[{"name":"WS2C","type":"exact"},{"name":"Waardenburg syndrome type IIC","type":"exact"},{"name":"Waardenburg syndrome, type 2C","type":"related"}],"termid":"MONDO:0011697","xrefs":{"Monarch":{"xref_id":"0011697"}}}


id: PBO:0034525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cellular_process","termid":"PBO:0034525"}


id: PBO:0081189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 2","termid":"PBO:0081189"}


id: MONDO:0100558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic disease characterized by growth restriction, microcephaly, skeletal dysplasia, and cognitive impairment. Less common but variable findings include brain anomalies, seizures, strokes, immunodeficiency, and cardiac anomalies, as well as ophthalmologic, skin, renal, gastrointestinal, hearing, and endocrine involvement. The term includes Microcephalic osteodysplastic primordial dwarfism type I/III (MOPDI), Taybi-Linder syndrome, Lowry-Wood syndrome, and Roifman syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNU4ATAC spectrum disorder","synonyms":[{"name":"RNU4ATAC-related disorder","type":"exact"},{"name":"RNU4atac-opathy","type":"exact"}],"termid":"MONDO:0100558","xrefs":{"Monarch":{"xref_id":"0100558"}}}


id: PBO:0112979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0112979"}


id: PBO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 4","termid":"PBO:0061584"}


id: PBO:0074877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58B","termid":"PBO:0074877"}


id: PBO:0030051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_anaphase_A","termid":"PBO:0030051"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: PBO:0077153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3B","termid":"PBO:0077153"}


id: GO:0018553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(2,3-dihydroxyphenyl)propionate + O2 = 2-hydroxy-6-keto-nona-2,4-dienedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(2,3-dihydroxyphenyl)propionate 1,2-dioxygenase activity (obsolete GO:0018553)","termid":"GO:0018553"}


id: MONDO:8000011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of chronic intestinal pseudoobstruction caused by a developmental failure of the enteric neurons to differentiate or migrate properly and manifests as a bowel obstruction.","definition_xrefs":["Orphanet:99811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal intestinal dysplasia","termid":"MONDO:0000858"},{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"},{"relation_name":"is_a","term_name":"visceral neuropathy, familial","termid":"MONDO:0023961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral neuropathy, familial, 1, autosomal recessive","secondary_identifiers":["UMLS:C1855733","DOID:0080679","OMIM:243180","MEDGEN:340946","GARD:3928","MESH:C537394"],"synonyms":[{"name":"Argyrophil myenteric plexus deficiency of","type":"related"},{"name":"Argyrophil myenteric plexus, deficiency of","type":"related"},{"name":"NID A","type":"related"},{"name":"intestinal pseudoobstruction due to neuronal disease","type":"related"},{"name":"neuronal intestinal dysplasia, type a","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal neuronal type","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, neuronal type","type":"related"},{"name":"visceral neuropathy familial","type":"related"},{"name":"visceral neuropathy, familial, autosomal recessive","type":"related"}],"termid":"MONDO:8000011","xrefs":{"Monarch":{"xref_id":"8000011"}}}


id: GO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell migration.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"positively_regulates","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration","synonyms":[{"name":"activation of cell migration","type":"narrow"},{"name":"stimulation of cell migration","type":"narrow"},{"name":"up regulation of cell migration","type":"exact"},{"name":"up-regulation of cell migration","type":"exact"},{"name":"upregulation of cell migration","type":"exact"}],"termid":"GO:0030335"}


id: GO:0022617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix disassembly","secondary_identifiers":["Reactome:R-HSA-1474228"],"termid":"GO:0022617"}


id: PBO:0077730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 2","termid":"PBO:0077730"}


id: PBO:0075850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2","termid":"PBO:0075850"}


id: GO:1900830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"gene_count":0,"genotype_count":0,"name":"obsolete D-tyrosine biosynthetic process (obsolete GO:1900830)","synonyms":[{"name":"D-tyrosine anabolism","type":"exact"},{"name":"D-tyrosine biosynthesis","type":"exact"},{"name":"D-tyrosine formation","type":"exact"},{"name":"D-tyrosine synthesis","type":"exact"}],"termid":"GO:1900830"}


id: GO:1900028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of ruffle assembly","termid":"GO:1900027"},{"relation_name":"negatively_regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ruffle assembly","synonyms":[{"name":"down regulation of membrane ruffle formation","type":"exact"},{"name":"down regulation of membrane ruffling","type":"exact"},{"name":"down regulation of ruffle assembly","type":"related"},{"name":"negative regulation of membrane ruffle formation","type":"exact"},{"name":"negative regulation of membrane ruffling","type":"exact"}],"termid":"GO:1900028"}


id: GO:0140167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a histone locus body.","definition_xrefs":["PMID:21576393","PMID:32401666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"histone locus body assembly","termid":"GO:0140167"}


id: PBO:0075973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 intronic transcript 1","termid":"PBO:0075973"}


id: GO:1904605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:krc","PMID:16503878"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of advanced glycation end-product receptor activity (obsolete GO:1904605)","synonyms":[{"name":"activation of AGE receptor activity","type":"narrow"},{"name":"activation of RAGE activity","type":"narrow"},{"name":"activation of advanced glycation end-product receptor activity","type":"narrow"},{"name":"positive regulation of AGE receptor activity","type":"exact"},{"name":"positive regulation of RAGE activity","type":"exact"},{"name":"up regulation of AGE receptor activity","type":"exact"},{"name":"up regulation of RAGE activity","type":"exact"},{"name":"up regulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"up-regulation of AGE receptor activity","type":"exact"},{"name":"up-regulation of RAGE activity","type":"exact"},{"name":"up-regulation of advanced glycation end-product receptor activity","type":"exact"},{"name":"upregulation of AGE receptor activity","type":"exact"},{"name":"upregulation of RAGE activity","type":"exact"},{"name":"upregulation of advanced glycation end-product receptor activity","type":"exact"}],"termid":"GO:1904605"}


id: PBO:0040415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c","termid":"PBO:0040415"}


id: GO:1903856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25535363"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytokinin dehydrogenase activity (obsolete GO:1903856)","synonyms":[{"name":"regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903856"}


id: PBO:0004555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2 (predicted)","termid":"PBO:0004555"}


id: MONDO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical aortic arch (obsolete MONDO:0021664)","termid":"MONDO:0021664","xrefs":{"Monarch":{"xref_id":"0021664"}}}


id: PBO:0084164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved negative regulator of RNA polymerase III; involved in tRNA processing and stability; inhibits tRNA degradation via rapid tRNA decay (RTD) pathway; binds N-terminal domain of Rpc160p subunit of Pol III to prevent closed-complex formation; regulated by phosphorylation mediated by TORC1, protein kinase A, Sch9p, casein kinase 2; localizes to cytoplasm during vegetative growth and translocates to nucleus and nucleolus under stress conditions","termid":"PBO:0084164"}


id: MONDO:1010949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline lymphoma","termid":"MONDO:0700176"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, domestic cat","secondary_identifiers":["OMIA:001708-9685"],"termid":"MONDO:1010949","xrefs":{"Monarch":{"xref_id":"1010949"}}}


id: PBO:0063170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 antisense RNA 2","termid":"PBO:0063170"}


id: GO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which the polar microtubules elongate and the two poles of the spindle move farther apart as part of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic anaphase","termid":"GO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000090"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0000090","GO:0008150","GO:0000087"],"is_obsolete":false,"name":"mitotic anaphase B","termid":"GO:0000092"}


id: GO:0008384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein.","definition_xrefs":["EC:2.7.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016301","GO:0004672","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"IkappaB kinase activity","secondary_identifiers":["Reactome:R-HSA-5684275","MetaCyc:2.7.11.10-RXN","Reactome:R-HSA-5684267","RHEA:19073"],"synonyms":[{"name":"ATP:IkappaB protein phosphotransferase activity","type":"related"},{"name":"CHUK","type":"related"},{"name":"IKBKA","type":"related"},{"name":"IKBKB","type":"related"},{"name":"IKK","type":"related"},{"name":"IKK-1","type":"related"},{"name":"IKK-2","type":"related"},{"name":"STK12","type":"related"},{"name":"TANK-binding kinase 1 activity","type":"narrow"},{"name":"TBK1","type":"related"},{"name":"inhibitor of NF-kappaB kinase activity","type":"related"},{"name":"inhibitor of NFkappaB kinase activity","type":"related"}],"termid":"GO:0008384"}


id: PBO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Hus1","termid":"PBO:0002704"}


id: PBO:0028234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_methionine_and_purine","termid":"PBO:0028234"}


id: MONDO:0015746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Male infertility due to globozoospermia is a male infertility due to sperm disorder characterized by the presence, in sperm, of a large majority of round-headed spermatozoa that lack the acrosome and have an aberrant nuclear membrane and midpiece defects. The acrosomeless spermatozoa is not able to penetrate the zona pellucida and thus fertilization failures, even with intracytoplasmic spem injection, are frequent.","definition_xrefs":["Orphanet:171709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility with teratozoospermia due to single gene mutation","termid":"MONDO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility due to globozoospermia","secondary_identifiers":["GARD:12502","UMLS:C5679591","DOID:0112312","MEDGEN:1826006"],"synonyms":[{"name":"Male infertility due to round-headed spermatozoa","type":"exact"},{"name":"globozoospermia","type":"related"},{"name":"male infertility due to globozoospermia","type":"exact"},{"name":"male infertility due to round-headed spermatozoa","type":"exact"},{"name":"round-headed sperm syndrome","type":"exact"}],"termid":"MONDO:0015746","xrefs":{"Monarch":{"xref_id":"0015746"}}}


id: MONDO:0021106
data:
  {"annotated_genes":["SJAG_04810","SJAG_03396","SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008157"},{"annotations":[87897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"},{"annotations":[88069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008214"},{"annotations":[89121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A rare genetic disorder caused by mutations in genes encoding proteins of the nuclear lamina.","definition_xrefs":["Wikipedia:Laminopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03396":null,"SJAG_03449":null,"SJAG_04810":null},"genotype_count":0,"is_obsolete":false,"name":"laminopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D000083083","Orphanet:98301","UMLS:C5392094","GARD:19444","MEDGEN:1716073"],"termid":"MONDO:0021106","terms_by_termid":{"MONDO:0008157":null,"MONDO:0008214":null,"MONDO:0008974":null,"MONDO:0012074":null,"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0021106"}}}


id: GO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to an oxygen (O) atom in a serine residue to form peptidyl-O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine palmitoylation (obsolete GO:0018221)","synonyms":[{"name":"peptidyl-serine O-palmitoylation","type":"exact"}],"termid":"GO:0018221"}


id: MONDO:0100179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Hirschsprung disease.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179","xrefs":{"Monarch":{"xref_id":"0100179"}}}


id: PBO:0066648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 2","termid":"PBO:0066648"}


id: GO:0090426
data:
  {"annotated_genes":["SJAG_00938","SJAG_04621","SJAG_04498","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100210,91206,110113,99952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the compaction of actin filaments.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090426","terms_by_termid":{"GO:0071520":null}}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: FYPO:0008168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the nuclear foci are absent.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished nuclear foci","termid":"FYPO:0008168"}


id: GO:1903005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["PMID:22970133","GOC:PARL","GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein deubiquitination","termid":"GO:0090086"},{"relation_name":"is_a","term_name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"},{"relation_name":"negatively_regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein K63-linked deubiquitination","synonyms":[{"name":"down regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"down-regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"downregulation of protein K63-linked deubiquitination","type":"exact"},{"name":"inhibition of protein K63-linked deubiquitination","type":"narrow"}],"termid":"GO:1903005"}


id: PBO:0073688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 1","termid":"PBO:0073688"}


id: PBO:0080041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 27","termid":"PBO:0080041"}


id: PBO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pro-orthology_relationship_with","termid":"PBO:0034160"}


id: MONDO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A febrile illness characterized by chills, aches, vomiting, leukopenia, and sometimes encephalitis. It is caused by the colorado tick fever virus, a reovirus transmitted by the tick Dermacentor andersoni.","definition_xrefs":["MESH:D003121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Colorado tick fever","secondary_identifiers":["NORD:989","ICD9:066.1","DOID:4885","MEDGEN:40398","ICD10CM:A93.2","GARD:19042","icd11.foundation:951357413","Orphanet:83595","SCTID:6452009","UMLS:C0009400","MedDRA:10010022"],"synonyms":[{"name":"American mountain fever","type":"exact"},{"name":"Colorado tick encephalitis","type":"exact"},{"name":"Colorado tick fever virus caused disease or disorder","type":"exact"},{"name":"Colorado tick fever virus disease or disorder","type":"exact"},{"name":"Colorado tick fever virus infectious disease","type":"exact"},{"name":"Colorado tick-borne disease","type":"exact"},{"name":"Mountain fever","type":"exact"},{"name":"Mountain tick fever","type":"exact"},{"name":"Tick fever, American mountain","type":"exact"}],"termid":"MONDO:0005708","xrefs":{"Monarch":{"xref_id":"0005708"}}}


id: PBO:0064022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 56","termid":"PBO:0064022"}


id: MOD:00735
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexosuronic acid group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexosuronylated","synonyms":[{"name":"HexA","type":"exact"}],"termid":"MOD:00735"}


id: PBO:0078838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-2","termid":"PBO:0078838"}


id: GO:0140438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a stearoyl group to an amino acid in a protein.","definition_xrefs":["PMID:26214738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein stearoylation","termid":"GO:0140438"}


id: PR:O94643
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.01","synonyms":[{"name":"Spom972h-mis17","type":"exact"},{"name":"sim4 complex subunit mis17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94643"}


id: GO:0106104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate receptor clustering.","definition_xrefs":["PMID:28455372","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"regulates","term_name":"glutamate receptor clustering","termid":"GO:0097688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate receptor clustering","termid":"GO:0106104"}


id: GO:0018829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane = HCl + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane is also known as DDD; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.","definition_xrefs":["UM-BBD_reactionID:r0513"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane dehydrochlorinase activity (obsolete GO:0018829)","synonyms":[{"name":"DDD dehydrochlorinase activity","type":"exact"}],"termid":"GO:0018829"}


id: PBO:0083189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C","termid":"PBO:0083189"}


id: MONDO:0957303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"palmoplantar keratoderma, epidermolytic","termid":"MONDO:0968949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, epidermolytic, 2","secondary_identifiers":["DOID:0070551","UMLS:C2936837","OMIM:620411","MEDGEN:445412"],"termid":"MONDO:0957303","xrefs":{"Monarch":{"xref_id":"0957303"}}}


id: GO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host cell wall (obsolete GO:0052020)","synonyms":[{"name":"metabolism of host cell wall by organism","type":"exact"}],"termid":"GO:0052020"}


id: MONDO:0019041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic inherited tumor (obsolete MONDO:0019041)","secondary_identifiers":["Orphanet:68336"],"synonyms":[{"name":"rare genetic tumor","type":"related"}],"termid":"MONDO:0019041","xrefs":{"Monarch":{"xref_id":"0019041"}}}


id: PBO:0049567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 3","termid":"PBO:0049567"}


id: PBO:0028270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028270"}


id: GO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"negative regulation of epidermis development","termid":"GO:0045683"},{"relation_name":"negatively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal cell differentiation","synonyms":[{"name":"down regulation of epidermal cell differentiation","type":"exact"},{"name":"down-regulation of epidermal cell differentiation","type":"exact"},{"name":"downregulation of epidermal cell differentiation","type":"exact"},{"name":"inhibition of epidermal cell differentiation","type":"narrow"},{"name":"negative regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045605"}


id: PBO:0061535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1","termid":"PBO:0061535"}


id: PBO:0030548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_serine_import","termid":"PBO:0030548"}


id: PBO:0074506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5","termid":"PBO:0074506"}


id: GO:1905906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bc","PMID:23106396","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid fibril formation","synonyms":[{"name":"regulation of amyloid fibril assembly","type":"related"},{"name":"regulation of amyloid structure assembly","type":"related"},{"name":"regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905906"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: MONDO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious viral infection caused by the varicella zoster virus. Clinically, it may be manifested as shingles or chicken pox.","definition_xrefs":["NCIT:C96407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"varicella zoster infection","secondary_identifiers":["MEDGEN:668886","EFO:0006509","SCTID:309465005","UMLS:C0586989","ICD9:052.7"],"synonyms":[{"name":"Varicella-zoster Virus infection","type":"exact"},{"name":"varicella zoster infection","type":"exact"}],"termid":"MONDO:0005608","xrefs":{"Monarch":{"xref_id":"0005608"}}}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: MONDO:0008008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MOMO syndrome is a very rare genetic overgrowth/obesity syndrome characterized by macrocephaly, obesity, mental (intellectual) disability and ocular abnormalities. Other frequent clinical signs include macrosomia, downslanting palpebral fissures, hypertelorism, broad nasal root, high and broad forehead and delay in bone maturation, in association with normal thyroid function and karyotype.","definition_xrefs":["Orphanet:2563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOMO syndrome","secondary_identifiers":["MESH:C535812","OMIM:157980","GARD:178","MEDGEN:371897","SCTID:724137002","UMLS:C1834759"],"synonyms":[{"name":"MOMO syndrome","type":"exact"},{"name":"macrocephaly-obesity-mental disability-ocular abnormalities syndrome","type":"exact"},{"name":"macrocrania, obesity, ocular abnormalities (retinal coloboma and nystagmus)","type":"related"},{"name":"macrosomia, obesity, macrocephaly, and ocular abnormalities","type":"related"},{"name":"macrosomia, obesity, macrocephaly, ocular abnormalities","type":"related"},{"name":"macrosomia-obesity-macrocephaly-ocular abnormalities syndrome","type":"exact"}],"termid":"MONDO:0008008","xrefs":{"Monarch":{"xref_id":"0008008"}}}


id: MONDO:0021645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal varices","termid":"MONDO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal varices with bleeding","secondary_identifiers":["ICD10WHO:I85.0","SCTID:17709002","UMLS:C0155789","ICD10CM:I85.01","MEDGEN:57840","ICD9:456.0"],"termid":"MONDO:0021645","xrefs":{"Monarch":{"xref_id":"0021645"}}}


id: MONDO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic dilatation of the hepatic duct or bile duct.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct cyst","secondary_identifiers":["icd11.foundation:819487805","SCTID:397868007","ICD9:576.8","ICD10CM:Q44.4","ICD9:751.69","GARD:21973","OMIM:603003","Orphanet:480501","UMLS:C0008340","MESH:D015529","DOID:899","MEDGEN:3037"],"synonyms":[{"name":"bile duct cysts","type":"exact"},{"name":"choledochal cyst","type":"exact"},{"name":"choledochal cysts","type":"exact"},{"name":"choledochocele","type":"exact"},{"name":"congenital choledochal cyst","type":"exact"},{"name":"congenital cystic dilatation of the biliary tract","type":"exact"}],"termid":"MONDO:0018805","xrefs":{"Monarch":{"xref_id":"0018805"}}}


id: PBO:0058463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5192","termid":"PBO:0058463"}


id: PBO:0031417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_adhesion_during_vegetative_growth","termid":"PBO:0031417"}


id: PR:Q9UTJ3-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTJ3-2.","definition_xrefs":["UniProtKB:Q9UTJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTJ3"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 isoform meu1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTJ3-2"],"synonyms":[{"name":"Spom972h-meu1-1/iso:meu1-2","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform SPAC1556.06.2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform SPAC1556.06b (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 1/2 isoform meu2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTJ3-2"}


id: PR:P41410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.03c","secondary_identifiers":["UniProtKB:P41410"],"synonyms":[{"name":"RAD54 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54L","type":"exact"}],"termid":"PR:P41410"}


id: PBO:0048512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 1","termid":"PBO:0048512"}


id: PBO:0043742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 like","termid":"PBO:0043742"}


id: PBO:0119640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR checkpoint kinase","termid":"PBO:0119640"}


id: PBO:0072091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 22","termid":"PBO:0072091"}


id: PBO:0052589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore associated 1","termid":"PBO:0052589"}


id: PBO:0059672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 38","termid":"PBO:0059672"}


id: GO:0007407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a neuroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast activation","secondary_identifiers":["GO:0043352","GO:0043351"],"termid":"GO:0007407"}


id: FYECO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleic acid","termid":"FYECO:0000049"}


id: GO:1900458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:21855796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brassinosteroid mediated signaling pathway","termid":"GO:1900457"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"down regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"downregulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"downregulation of brassinosteroid mediated signalling","type":"exact"},{"name":"inhibition of brassinosteroid mediated signaling pathway","type":"narrow"},{"name":"inhibition of brassinosteroid mediated signalling","type":"exact"},{"name":"negative regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900458"}


id: MONDO:0006217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the gallbladder. It is characterized by the presence of glandular and squamous malignant epithelial components.","definition_xrefs":["NCIT:C7356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"gallbladder squamous cell carcinoma","termid":"MONDO:0006220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder adenosquamous carcinoma","secondary_identifiers":["EFO:1000264","DOID:5627","ONCOTREE:GBASC","MEDGEN:232539","UMLS:C1333741"],"synonyms":[{"name":"GBASC","type":"related"},{"name":"adenosquamous carcinoma of gallbladder","type":"exact"},{"name":"adenosquamous carcinoma of the gallbladder","type":"exact"},{"name":"adenosquamous gallbladder carcinoma","type":"exact"},{"name":"gall bladder adenosquamous carcinoma","type":"exact"},{"name":"gallbladder adenosquamous cancer","type":"exact"},{"name":"gallbladder adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006217","xrefs":{"Monarch":{"xref_id":"0006217"}}}


id: PBO:0035767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_vegetative_growth","termid":"PBO:0035767"}


id: FYPO:0005160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle progression is normal (i.e. indistinguishable from wild type) after exposure to hydroxyurea.","definition_xrefs":["PMID:16849602","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle progression following cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle progression following HU exposure","type":"exact"},{"name":"normal cell cycle progression following cellular response to HU","type":"exact"}],"termid":"FYPO:0005160"}


id: MONDO:0800483
data:
  {"annotated_genes":["SJAG_00504"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"}]},"cv_name":"mondo","definition":"A congenital malformation syndrome characterized by mandibulofacial dysostosis and anterior upper-limb defects, though occasionally, lower-limb defects have also been reported. Intrafamilial variability has been observed along with phenotype variability and severity including shoulder and pelvic girdle hypoplasia, fibular hypoplasia and eleven ribs.","direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"SF3B4-related acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"SF3B4-related acrofacial dysostosis","type":"exact"}],"termid":"MONDO:0800483","terms_by_termid":{"MONDO:0007943":null},"xrefs":{"Monarch":{"xref_id":"0800483"}}}


id: PBO:0085260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral peroxisomal membrane protein; involved in controlling peroxisome size and number, interacts with Pex25p; PEX27 has a paralog, PEX25, that arose from the whole genome duplication","termid":"PBO:0085260"}


id: FYECO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2-oxoglutarate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2-OG","synonyms":[{"name":"2-OG present","type":"exact"},{"name":"2-oxoglutarate added","type":"exact"},{"name":"2-oxoglutarate present","type":"exact"}],"termid":"FYECO:0000088"}


id: GO:0018331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-serine to form O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-serine (obsolete GO:0018331)","termid":"GO:0018331"}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: PBO:0060131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 32","termid":"PBO:0060131"}


id: PBO:0029293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus_during_meiosis","termid":"PBO:0029293"}


id: MONDO:0015246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A anorectal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","secondary_identifiers":["Orphanet:117573"],"synonyms":[{"name":"syndrome associated with anorectal malformation","type":"exact"},{"name":"syndromic anorectal malformation","type":"exact"}],"termid":"MONDO:0015246","xrefs":{"Monarch":{"xref_id":"0015246"}}}


id: FYPO:0004263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase, under conditions of nitrogen limitation, such as in a medium that contains a low level of NH4Cl and no other nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability in stationary phase","termid":"FYPO:0001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal viability in stationary phase during nitrogen limitation","synonyms":[{"name":"normal cell population viability in stationary phase during nitrogen limitation","type":"exact"}],"termid":"FYPO:0004263"}


id: MONDO:0018560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anterior urethral valve (obsolete MONDO:0018560)","secondary_identifiers":["SCTID:253907008","Orphanet:435372"],"termid":"MONDO:0018560","xrefs":{"Monarch":{"xref_id":"0018560"}}}


id: GO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing involved in replicative cell aging (obsolete GO:0001308)","synonyms":[{"name":"loss of chromatin silencing during replicative cell ageing","type":"related"},{"name":"loss of chromatin silencing involved in replicative cell aging","type":"exact"}],"termid":"GO:0001308"}


id: PBO:0054961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2375","termid":"PBO:0054961"}


id: PBO:0073222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 6C","termid":"PBO:0073222"}


id: GO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive gamma-delta T cell acquires the specialized features of an effector, regulatory, or memory T cell and contributes to an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell differentiation involved in immune response","synonyms":[{"name":"gamma-delta T cell development involved in immune response","type":"related"},{"name":"gamma-delta T cell differentiation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte differentiation during immune response","type":"related"},{"name":"gamma-delta T-cell differentiation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002303"}


id: GO:1990948
data:
  {"annotated_genes":["SJAG_01515","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100618,117583],"is_not":false,"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin ligase.","definition_xrefs":["GOC:dph","PMID:21389117","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase inhibitor activity","termid":"GO:0055105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"ubiquitin ligase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090645","GO:0061637"],"synonyms":[{"name":"APC-Cdc20 complex inhibitor activity","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibitor activity","type":"narrow"}],"termid":"GO:1990948","terms_by_termid":{"GO:1990948":null}}


id: MONDO:0013506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 7q36.3.","definition_xrefs":["DOID:0070092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"},{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 16","secondary_identifiers":["OMIM:613959","UMLS:C3151408","MEDGEN:462758"],"synonyms":[{"name":"SCZD16","type":"exact"},{"name":"chromosome 7Q36.3 Duplication syndrome, 362-Kb","type":"related"},{"name":"schizophrenia 16","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 7Q36.3-related","type":"related"},{"name":"schizophrenia type 16","type":"exact"}],"termid":"MONDO:0013506","xrefs":{"Monarch":{"xref_id":"0013506"}}}


id: GO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + H+(out) = glycine betaine(in) + H+(in).","definition_xrefs":["TC:2.A.15.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"quaternary ammonium group:proton symporter activity","termid":"GO:0015652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycine betaine:proton symporter activity","synonyms":[{"name":"glycine betaine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015653"}


id: MONDO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the bronchus.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial disorder","secondary_identifiers":["EFO:1002018","SCTID:41427001","NCIT:C34439","MEDGEN:14233","MESH:D001982","DOID:1176","UMLS:C0006261","ICD9:519.19"],"synonyms":[{"name":"bronchial disorder","type":"exact"},{"name":"bronchospasm","type":"exact"},{"name":"bronchus disease","type":"exact"},{"name":"bronchus disease or disorder","type":"exact"},{"name":"disease of bronchus","type":"exact"},{"name":"disease or disorder of bronchus","type":"exact"},{"name":"disorder of bronchus","type":"exact"}],"termid":"MONDO:0001358","xrefs":{"Monarch":{"xref_id":"0001358"}}}


id: PBO:0045038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispatched RND transporter family member 3","termid":"PBO:0045038"}


id: GO:0008994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnulose 1-phosphate = glycerone phosphate + (S)-lactaldehyde.","definition_xrefs":["EC:4.1.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnulose-1-phosphate aldolase activity","secondary_identifiers":["RHEA:19689","MetaCyc:RHAMNULPALDOL-RXN"],"synonyms":[{"name":"L-rhamnulose 1-phosphate aldolase activity","type":"related"},{"name":"L-rhamnulose-1-phosphate S-lactaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"L-rhamnulose-1-phosphate lactaldehyde-lyase activity","type":"related"},{"name":"L-rhamnulose-phosphate aldolase activity","type":"related"},{"name":"rhamnulose phosphate aldolase activity","type":"related"}],"termid":"GO:0008994"}


id: PBO:0011983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPBC12C2.03c (paralog)","termid":"PBO:0011983"}


id: PBO:0044377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 1","termid":"PBO:0044377"}


id: GO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of inositol phosphate biosynthetic process","termid":"GO:0060732"}


id: PBO:0090148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin, C-terminal","termid":"PBO:0090148"}


id: PBO:0044404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily D member 6","termid":"PBO:0044404"}


id: PBO:0078081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2","termid":"PBO:0078081"}


id: FYPO:0009094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine and proline as the nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"increased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009094"}


id: PBO:0042813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 3","termid":"PBO:0042813"}


id: PBO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL19 antisense RNA 1","termid":"PBO:0047366"}


id: PBO:0038562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3 binding protein","termid":"PBO:0038562"}


id: PBO:0017674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionyl-tRNA formyltransferase Fmt1 (predicted)","termid":"PBO:0017674"}


id: GO:0021571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 development","termid":"GO:0021571"}


id: PBO:0045371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH5 divergent transcript","termid":"PBO:0045371"}


id: PBO:0070112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 26 pseudogene","termid":"PBO:0070112"}


id: PBO:0038341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realized_in_response_to","termid":"PBO:0038341"}


id: MONDO:0011877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant osteopetrosis type I (ADO I) is a sclerosing bone disorder characterized by skeletal densification that predominantly involves the cranial vault.","definition_xrefs":["Orphanet:2783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 1","secondary_identifiers":["DOID:0110937","GARD:4151","MEDGEN:335932","MESH:C536056","OMIM:607634","UMLS:C1843330"],"synonyms":[{"name":"LRP5 osteopetrosis (disease)","type":"exact"},{"name":"OPTA1","type":"exact"},{"name":"autosomal dominant osteopetrosis type 1","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in LRP5","type":"exact"},{"name":"osteopetrosis autosomal dominant type 1","type":"related"},{"name":"osteopetrosis, autosomal dominant 1","type":"related"},{"name":"osteopetrosis, autosomal dominant type 1","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 1","type":"related"}],"termid":"MONDO:0011877","xrefs":{"Monarch":{"xref_id":"0011877"}}}


id: PBO:0083443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF ERG27/YLR100W","termid":"PBO:0083443"}


id: MONDO:0018872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute megakaryoblastic leukemia (AMKL) is a form of acute myeloid leukemia (AML) that occurs predominantly in childhood and particularly in children with Down syndrome (DS-AMKL). Nonspecific symptoms may be irritability, weakness, and dizziness while specific symptoms include pallor, fever, mucocutaneous bleeding, hepatosplenomegaly, neurological manifestations and rarely lymphadenopathy. Acute panmyelosis with myelofibrosis may also be associated with AMKL. In contrast to DS-AMKL (around 80 % survival), non-DS-AMKL is an AML subgroup associated with poor prognosis.","definition_xrefs":["Orphanet:518"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia","secondary_identifiers":["NCIT:C3170","EFO:0003025","ICD9:207.2","icd11.foundation:2057381869","UMLS:C0023462","GARD:524","ICDO:9910/3","MEDGEN:44124","MESH:D007947","SCTID:277602003","ONCOTREE:AMKL","NANDO:2200011","DOID:8761","MedDRA:10060556","Wikipedia:Acute_megakaryoblastic_leukemia"],"synonyms":[{"name":"AMKL","type":"exact"},{"name":"AML M7","type":"exact"},{"name":"FAB M7","type":"exact"},{"name":"acute M7 myeloid leukaemia","type":"exact"},{"name":"acute M7 myeloid leukemia","type":"exact"},{"name":"acute megakaryoblastic leukaemia (FAB type M7)","type":"exact"},{"name":"acute megakaryoblastic leukemia","type":"exact"},{"name":"acute megakaryoblastic leukemia (FAB type M7)","type":"exact"},{"name":"acute megakaryoblastic leukemia, FAB M7","type":"exact"},{"name":"acute megakaryocytic leukaemia","type":"exact"},{"name":"acute megakaryocytic leukemia","type":"exact"},{"name":"acute megakaryocytic leukemias","type":"exact"},{"name":"acute myeloblastic leukaemia type 7","type":"related"},{"name":"acute myeloblastic leukemia type 7","type":"related"},{"name":"acute myeloid leukaemia M7","type":"exact"},{"name":"acute myeloid leukemia M7","type":"exact"},{"name":"leukemia, megakaryocytic, malignant","type":"exact"},{"name":"megakaryocytic leukaemia","type":"related"},{"name":"megakaryocytic leukemia","type":"related"},{"name":"megakaryocytic myelosis","type":"exact"},{"name":"thrombocytic leukaemia","type":"exact"},{"name":"thrombocytic leukemia","type":"exact"}],"termid":"MONDO:0018872","xrefs":{"Monarch":{"xref_id":"0018872"}}}


id: GO:0036320
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90013],"is_not":false,"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone P-factor and transmitting the signal across the membrane to initiate a change in cell activity. P-factor is a polypeptide of 23 residues, with the sequence Thr-Tyr-Ala-Asp-Phe-Leu-Arg-Ala-Tyr-Gln-Ser-Trp-Asn-Thr-Phe-Val-Asn-Pro-Asp-Arg-Pro-Asn-Leu, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Plus.","definition_xrefs":["PMID:8314086","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type P-factor pheromone receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P-factor mating pheromone receptor activity","type":"exact"},{"name":"P-factor receptor activity","type":"exact"}],"termid":"GO:0036320","terms_by_termid":{"GO:0036320":null}}


id: FYPO:0004451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to calcium ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to calcium ion","synonyms":[{"name":"decreased protein accumulation during cellular response to calcium ion","type":"related"},{"name":"decreased protein level during cellular response to calcium","type":"exact"},{"name":"decreased protein level during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004451"}


id: PBO:0051742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 9","termid":"PBO:0051742"}


id: PBO:0018109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght6","termid":"PBO:0018109"}


id: GO:0051661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a centrosome is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome localization","termid":"GO:0051642"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of centrosome location","synonyms":[{"name":"maintenance of centrosome localization","type":"related"}],"termid":"GO:0051661"}


id: PBO:0116782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR81 antisense RNA 1","termid":"PBO:0116782"}


id: PBO:0045115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublesex and mab-3 related transcription factor 2","termid":"PBO:0045115"}


id: MONDO:0012190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 7, with nephropathy and deafness","secondary_identifiers":["Orphanet:300333","UMLS:C1836823","OMIM:609057","MEDGEN:323004","GARD:17367","MESH:C563798"],"synonyms":[{"name":"epidermolysis bullosa simplex 7, with nephropathy and deafness","type":"exact"},{"name":"nephropathy with pretibial epidermolysis bullosa and deafness","type":"related"},{"name":"nephrotic syndrome - deafness - pretibial epidermolysis bullosa syndrome","type":"exact"},{"name":"nephrotic syndrome-hearing loss-pretibial epidermolysis bullosa syndrome","type":"exact"}],"termid":"MONDO:0012190","xrefs":{"Monarch":{"xref_id":"0012190"}}}


id: MONDO:1012974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperbilirubinemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperbilirubinemia, non-human animal","termid":"MONDO:1012974","xrefs":{"Monarch":{"xref_id":"1012974"}}}


id: PBO:0062333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 72 pseudogene","termid":"PBO:0062333"}


id: GO:0070590
data:
  {"annotated_genes":["SJAG_03013","SJAG_04184","SJAG_03587","SJAG_01321","SJAG_03483","SJAG_03057","SJAG_04236","SJAG_00974","SJAG_04483","SJAG_04868","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96363],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90081,90575,92127,93665],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[111059,116098,119811,119819,106120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a spore wall. A spore wall is the specialized cell wall lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"part_of","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"spore wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070590","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: GO:1904784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a NLRP1 inflammasome complex.","definition_xrefs":["GOC:TermGenie","PMID:19124602","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"NLRP1 inflammasome complex assembly","synonyms":[{"name":"NALP1 inflammasome complex assembly","type":"exact"},{"name":"NALP1 inflammasome complex formation","type":"exact"},{"name":"NLRP1 inflammasome complex formation","type":"exact"}],"termid":"GO:1904784"}


id: PR:O13989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26H5.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.07c","synonyms":[{"name":"Spom972h-SPAC26H5.07c","type":"exact"}],"termid":"PR:O13989"}


id: FYPO:0001117
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is lower than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0002935"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased RNA accumulation during vegetative growth","type":"related"},{"name":"decreased RNA level during mitotic cell cycle","type":"related"},{"name":"decreased cellular RNA level during vegetative growth","type":"exact"},{"name":"decreased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"decreased mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mRNA level during vegetative growth","type":"narrow"},{"name":"decreased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"decreased messenger RNA level during vegetative growth","type":"narrow"},{"name":"decreased transcript level during vegetative growth","type":"exact"},{"name":"reduced RNA level during vegetative growth","type":"exact"},{"name":"reduced mRNA level during vegetative growth","type":"narrow"}],"termid":"FYPO:0001117","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PBO:0052900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-11","termid":"PBO:0052900"}


id: MONDO:0008549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracic dysostosis, isolated","secondary_identifiers":["MEDGEN:396080","MESH:C566063","OMIM:187750","UMLS:C1861204"],"synonyms":[{"name":"thoracic dysostosis, isolated","type":"exact"}],"termid":"MONDO:0008549","xrefs":{"Monarch":{"xref_id":"0008549"}}}


id: PBO:0059312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L52","termid":"PBO:0059312"}


id: MONDO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the mandible","direct_ancestors":[{"relation_name":"is_a","term_name":"jaw cancer","termid":"MONDO:0002131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"mandibular cancer","secondary_identifiers":["NCIT:C35178","UMLS:C0153511","MESH:D008339","EFO:0007356","SCTID:448668007","ICD9:170.1","MEDGEN:57788","DOID:2338"],"synonyms":[{"name":"cancer of mandible","type":"exact"},{"name":"malignant mandible neoplasm","type":"exact"},{"name":"malignant neoplasm of inferior maxilla","type":"exact"},{"name":"malignant neoplasm of lower jaw bone","type":"exact"},{"name":"malignant neoplasm of mandible","type":"exact"},{"name":"mandible cancer","type":"exact"},{"name":"mandibular neoplasm","type":"broad"},{"name":"neoplasm of mandible","type":"broad"}],"termid":"MONDO:0005837","xrefs":{"Monarch":{"xref_id":"0005837"}}}


id: PBO:0060177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 pseudogene 1","termid":"PBO:0060177"}


id: GO:0008207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"C21-steroid hormone metabolic process","synonyms":[{"name":"C21-steroid hormone metabolism","type":"exact"}],"termid":"GO:0008207"}


id: PR:Q9HDZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr101 gene.","definition_xrefs":["UniProtKB:Q9HDZ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C589.09, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.09","synonyms":[{"name":"Spom972h-csr101","type":"exact"}],"termid":"PR:Q9HDZ5"}


id: GO:0042168
data:
  {"annotated_genes":["SJAG_02876","SJAG_01841","SJAG_03862","SJAG_00366","SJAG_00097","SJAG_00699","SJAG_04515","SJAG_04984","SJAG_01155","SJAG_04397","SJAG_04944","SJAG_01372","SJAG_05283","SJAG_02896","SJAG_04109","SJAG_01786","SJAG_01192","SJAG_03173","SJAG_03961","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81837,80180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[115889,100149,107157,76082,102178,103033,113877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[108573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[68920,60622,63905,59470,81834,65884,57225,63892],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[78707,73119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.","definition_xrefs":["GOC:jl","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9707616"],"synonyms":[{"name":"haem metabolic process","type":"exact"},{"name":"haem metabolism","type":"exact"},{"name":"heme metabolism","type":"exact"}],"termid":"GO:0042168","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: PBO:0039171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 3","termid":"PBO:0039171"}


id: MONDO:0017207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"primary organ-specific lymphoma","secondary_identifiers":["NCIT:C7185","UMLS:C5680788","Orphanet:279911","MEDGEN:1826175","GARD:21064"],"termid":"MONDO:0017207","xrefs":{"Monarch":{"xref_id":"0017207"}}}


id: MONDO:0018539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of small intestine (obsolete MONDO:0018539)","secondary_identifiers":["Orphanet:425368"],"synonyms":[{"name":"rare epithelial tumor of small bowel","type":"exact"}],"termid":"MONDO:0018539","xrefs":{"Monarch":{"xref_id":"0018539"}}}


id: GO:1902347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a strigolactone stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23893171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to strigolactone","synonyms":[{"name":"response to strigolactone analog GR24","type":"related"}],"termid":"GO:1902347"}


id: PBO:0003543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp10","termid":"PBO:0003543"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: MONDO:0011156
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88766],"is_not":false,"summary":null,"term":"MONDO:0011156"}]},"cv_name":"mondo","definition":"Progressive familial intrahepatic cholestasis type 2 (PFIC2), a type of progressive familial intrahepatic cholestasis (PFIC), is a severe, neonatal, hereditary disorder in bile formation that is hepatocellular in origin and not associated with extrahepatic features. Initially, PFIC2 was reported under the name Byler syndrome.","definition_xrefs":["Orphanet:79304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign recurrent intrahepatic cholestasis type 2","termid":"MONDO:0011559"},{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601847","UMLS:C3489789","NANDO:1201044","icd11.foundation:1168921980","DOID:0070222","MEDGEN:483742","GARD:1288"],"synonyms":[{"name":"ABCB11 progressive familial intrahepatic cholestasis","type":"exact"},{"name":"BSEP deficiency","type":"exact"},{"name":"PFIC2","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic 2","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 2","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 2","type":"exact"},{"name":"progressive familial intrahepatic cholestasis caused by mutation in ABCB11","type":"exact"},{"name":"progressive familial intrahepatic cholestasis type 2","type":"exact"},{"name":"severe ABCB11 deficiency","type":"related"}],"termid":"MONDO:0011156","terms_by_termid":{"MONDO:0011156":null},"xrefs":{"Monarch":{"xref_id":"0011156"}}}


id: PBO:0114536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3818 and PXA domain conserved fungal protein, implicated in lipid metabolism/ membrane organization or vesicle-mediated transport","termid":"PBO:0114536"}


id: FYPO:0007603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microfilament motor activity","termid":"FYPO:0006093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased microfilament motor activity","synonyms":[{"name":"decreased actin filament motor activity","type":"exact"},{"name":"decreased microfilament motor (ATPase) activity","type":"exact"},{"name":"decreased myosin ATPase activity","type":"related"},{"name":"reduced microfilament motor activity","type":"exact"}],"termid":"FYPO:0007603"}


id: PBO:0049294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase C-terminal domain containing","termid":"PBO:0049294"}


id: GO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"is_a","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}


id: GO:1905431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a microcystin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:26055554","GO_REF:0000065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microcystin transport","termid":"GO:1905431"}


id: PBO:0040105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 1","termid":"PBO:0040105"}


id: GO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate = ADP + acetyl phosphate.","definition_xrefs":["EC:2.7.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"acetate kinase activity","secondary_identifiers":["RHEA:11352","MetaCyc:ACETATEKIN-RXN"],"synonyms":[{"name":"AK activity","type":"related"},{"name":"ATP:acetate phosphotransferase activity","type":"related"},{"name":"AckA","type":"related"},{"name":"acetate kinase (phosphorylating) activity","type":"related"},{"name":"acetic kinase activity","type":"related"},{"name":"acetokinase activity","type":"related"}],"termid":"GO:0008776"}


id: MOD:00247
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-serine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0242","PubMed:8183941","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-serine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Ser-Cys)","type":"exact"},{"name":"L-serine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00247"}


id: MOD:02033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(5) HexNAc(3)","definition_xrefs":["PubMed:33135055","Unimod:1484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex5HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(5) HexNAc(3)","type":"related"}],"termid":"MOD:02033"}


id: SO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby the process of editing is disrupted with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_processing_variant","termid":"SO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_variant","synonyms":[{"name":"editing variant","type":"exact"}],"termid":"SO:0001544"}


id: PBO:0089687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1","termid":"PBO:0089687"}


id: MONDO:0001292
data:
  {"annotated_genes":["SJAG_00260","SJAG_03163","SJAG_02398","SJAG_03920","SJAG_01671","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[88885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[88785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[89032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"A disease involving the autonomic nervous system.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autonomic neuropathy","termid":"MONDO:0001300"},{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"autonomic nervous system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:337.1","DOID:11465","MESH:D001342","SCTID:15241006","UMLS:C1145628","EFO:0009532","ICD9:337.9","SCTID:128123007","MEDGEN:218837"],"synonyms":[{"name":"ANS (autonomic nervous system) diseases","type":"related"},{"name":"ANS disease","type":"related"},{"name":"ANS diseases","type":"related"},{"name":"autonomic central nervous system diseases","type":"related"},{"name":"autonomic disease","type":"related"},{"name":"autonomic diseases","type":"related"},{"name":"autonomic dysfunction, segmental","type":"related"},{"name":"autonomic dysfunctions, segmental","type":"related"},{"name":"autonomic nervous disease","type":"exact"},{"name":"autonomic nervous system disease","type":"exact"},{"name":"autonomic nervous system disease or disorder","type":"exact"},{"name":"autonomic nervous system disorder","type":"exact"},{"name":"autonomic nervous system disorders","type":"related"},{"name":"autonomic peripheral nervous system diseases","type":"narrow"},{"name":"central autonomic nervous system diseases","type":"related"},{"name":"disease of autonomic nervous system","type":"exact"},{"name":"disease or disorder of autonomic nervous system","type":"exact"},{"name":"disorder of autonomic nervous system","type":"exact"},{"name":"disorder of peripheral autonomic nervous system","type":"exact"},{"name":"disorder of the autonomic nervous system","type":"exact"},{"name":"disorders of the autonomic nervous system","type":"related"},{"name":"dysautonomia","type":"narrow"},{"name":"nervous system diseases, autonomic","type":"related"},{"name":"nervous system diseases, sympathetic","type":"related"},{"name":"peripheral autonomic nervous system diseases","type":"narrow"},{"name":"segmental autonomic dysfunction","type":"related"},{"name":"segmental autonomic dysfunctions","type":"related"}],"termid":"MONDO:0001292","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001292"}}}


id: GO:0010895
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95777],"is_not":false,"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergosterol biosynthetic process","termid":"GO:0032443"},{"relation_name":"is_a","term_name":"negative regulation of sterol biosynthetic process","termid":"GO:0106119"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010895","terms_by_termid":{"GO:0010895":null}}


id: PBO:0029783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_morphology_(obsolete_FYPO:0002454)","termid":"PBO:0029783"}


id: PBO:0017896
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Int6","termid":"PBO:0017896"}


id: PBO:0084720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; binds to the 5' UTR of the COX3 mRNA to activate its translation together with Pet122p and Pet494p; also binds to the COX1 Group I intron AI5 beta to facilitate exon ligation during splicing; also stimulates efficient synthesis of Cox1p","termid":"PBO:0084720"}


id: MONDO:0012769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 14","secondary_identifiers":["UMLS:C2677772","MEDGEN:393832","OMIM:611958","MESH:C567448","GARD:15537"],"synonyms":[{"name":"HPC14","type":"exact"},{"name":"prostate cancer, hereditary, 14","type":"exact"}],"termid":"MONDO:0012769","xrefs":{"Monarch":{"xref_id":"0012769"}}}


id: PBO:0017941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-binding protein Wbp4 (predicted)","termid":"PBO:0017941"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:tb","GOC:dos","GOC:dph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: MONDO:0850282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by the development of persistent airway inflammation and recurrent attacks of breathlessness and wheezing, which vary in severity and frequency.","definition_xrefs":["DOID:0080809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic asthma","secondary_identifiers":["MEDGEN:1843404","UMLS:C0877430"],"synonyms":[{"name":"adult-onset severe asthma","type":"narrow"},{"name":"persistent mild asthma","type":"narrow"},{"name":"persistent moderate asthma","type":"narrow"},{"name":"persistent severe asthma","type":"narrow"}],"termid":"MONDO:0850282","xrefs":{"Monarch":{"xref_id":"0850282"}}}


id: GO:0055011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac muscle cell in the atrium. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The atrium is the part of the heart that receives blood into the organ.","definition_xrefs":["GOC:devbiol","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell differentiation","synonyms":[{"name":"atrial cardiomyocyte differentiation","type":"exact"},{"name":"atrial heart muscle cell differentiation","type":"exact"}],"termid":"GO:0055011"}


id: MONDO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of whitish patches on the mucosal surface of the cervix. Histologic examination reveals hyperkeratosis. In a minority of cases, underlying dysplasia or carcinoma in situ is present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervix leukoplakia","secondary_identifiers":["SCTID:50923006","ICD9:622.2","NCIT:C3976","UMLS:C0269194","DOID:9043","MEDGEN:124350","ICD10CM:N88.0"],"synonyms":[{"name":"cervical leukoplakia","type":"exact"},{"name":"cervix leukoplakia","type":"exact"},{"name":"cervix uteri leukoplakia","type":"exact"},{"name":"leukoplakia of cervix","type":"exact"},{"name":"leukoplakia of cervix (uteri)","type":"exact"},{"name":"leukoplakia of cervix uteri","type":"exact"},{"name":"leukoplakia of the cervix","type":"exact"},{"name":"leukoplakia of the cervix uteri","type":"exact"},{"name":"leukoplakia of the uterine cervix","type":"exact"},{"name":"leukoplakia of uterine cervix","type":"exact"}],"termid":"MONDO:0004702","xrefs":{"Monarch":{"xref_id":"0004702"}}}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02948","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94333,109234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[70989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120547"},{"annotations":[73744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[73741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04397":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null,"GO:0120547":null}}


id: PBO:0058340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4713 host gene","termid":"PBO:0058340"}


id: PBO:0073454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 3","termid":"PBO:0073454"}


id: PBO:0056242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 3, pseudogene","termid":"PBO:0056242"}


id: GO:0018737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-ketocyclohexane-1-carboxyl-CoA + H2O = pimeloyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-ketocyclohexane-1-carboxyl-CoA hydrolase activity (obsolete GO:0018737)","termid":"GO:0018737"}


id: GO:0046386
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[81285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate breakdown","type":"exact"},{"name":"deoxyribose phosphate catabolism","type":"exact"},{"name":"deoxyribose phosphate degradation","type":"exact"}],"termid":"GO:0046386","terms_by_termid":{"GO:0035863":null,"GO:0046081":null}}


id: PBO:0055565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3001","termid":"PBO:0055565"}


id: PATO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000756 transfer arousal value (obsolete PATO:0000756)","termid":"PATO:0000756"}


id: PBO:0044297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC5 antisense RNA 1","termid":"PBO:0044297"}


id: MONDO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited connective tissue disorder that is caused by defects in a protein called collagen. Common symptoms include severe joint hypermobility ; congenital hip dislocation; fragile, hyperextensible skin; hypotonia ; and kyphoscoliosis (kyphosis and scoliosis). EDS, arthrochalasia type is caused by changes (mutations) in the COL1A1 gene or the COL1A2 gene and is inherited in an autosomal dominant manner. Treatment and management is focused on preventing serious complications and relieving associated signs and symptoms.","definition_xrefs":["GARD:0002084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type","secondary_identifiers":["MESH:C562625","NANDO:2201260","GARD:2084","NANDO:1200650","NCIT:C125701","OMIM:130060","UMLS:C4551623","SCTID:4170004","DOID:0080727","MEDGEN:1645042","Orphanet:1899"],"synonyms":[{"name":"AEDS","type":"related"},{"name":"EDS 7A","type":"narrow"},{"name":"EDS 7B","type":"narrow"},{"name":"EDS VII","type":"exact"},{"name":"EDS VII, mutant procollagen type","type":"related"},{"name":"EDS7A (formerly)","type":"related"},{"name":"EDSARTH1","type":"related"},{"name":"Ehlers-Danlos syndrome type 7","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VII","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal dominant","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIA, autosomal dominant","type":"related"},{"name":"arthrochalasia EDS","type":"related"},{"name":"arthrochalasia Ehlers-Danlos syndrome","type":"related"},{"name":"arthrochalasis multiplex congenita","type":"related"}],"termid":"MONDO:0007525","xrefs":{"Monarch":{"xref_id":"0007525"}}}


id: FYPO:0000101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpropham. Cells stop growing (and may die) at a concentration of chlorpropham that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to chlorpropham","synonyms":[{"name":"hypersensitive to chlorpropham","type":"exact"},{"name":"sensitive to chlorpropham during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpropham during vegetative growth","type":"exact"},{"name":"sensitive to isopropyl N-3-chlorophenyl carbamate","type":"exact"},{"name":"sensitive to spindle poison","type":"broad"}],"termid":"FYPO:0000101"}


id: PBO:0062770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily X member 1 pseudogene","termid":"PBO:0062770"}


id: PBO:0045313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNPEP antisense RNA 1","termid":"PBO:0045313"}


id: PR:O42858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinoblastoma-binding protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.05c","secondary_identifiers":["UniProtKB:O42858"],"synonyms":[{"name":"COMPASS component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RBBP5","type":"exact"},{"name":"complex proteins associated with set1 protein swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42858"}


id: GO:1990507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone, and independent of ATP hydrolysis.","definition_xrefs":["GOC:rb","PMID:25242142"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-independent chaperone mediated protein folding (obsolete GO:1990507)","termid":"GO:1990507"}


id: GO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha3 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alpha3-beta1 complex","synonyms":[{"name":"ITGA3-ITGB1 complex","type":"narrow"},{"name":"VLA-3 complex","type":"exact"},{"name":"alpha3-beta1 integrin complex","type":"exact"}],"termid":"GO:0034667"}


id: PBO:0029051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_vegetative_growth","termid":"PBO:0029051"}


id: GO:0033936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the D-mannuronide linkages of polymannuronate.","definition_xrefs":["EC:3.2.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"polymannuronate hydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.121-RXN"],"synonyms":[{"name":"poly(mannuronide) mannuronohydrolase activity","type":"related"},{"name":"polymannuronic acid polymerase activity","type":"related"}],"termid":"GO:0033936"}


id: PBO:0036433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A nucleosome disassembly protein Ccp1","termid":"PBO:0036433"}


id: GO:0019820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P2 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they are the least dense of the subforms observed.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005777"],"is_obsolete":false,"name":"P2 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019820"}


id: PBO:0071966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A5","termid":"PBO:0071966"}


id: GO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the cytoplasmic replication fork, which mediates DNA replication. Includes DNA primase, DNA polymerase, DNA helicase, and other proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"part_of","term_name":"cytoplasmic replication fork","termid":"GO:0043597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic replisome","synonyms":[{"name":"prokaryotic replisome","type":"exact"}],"termid":"GO:0043600"}


id: GO:2000613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"negatively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"negative regulation of TSH secretion","type":"exact"},{"name":"negative regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000613"}


id: MONDO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A angiodysplasia that involves the intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiodysplasia","termid":"MONDO:0002322"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"angiodysplasia of intestine","secondary_identifiers":["UMLS:C0267367","ICD9:569.84","ICD9:569.85","MEDGEN:540621","SCTID:235853006","DOID:10846"],"synonyms":[{"name":"intestine angiodysplasia","type":"exact"}],"termid":"MONDO:0001138","xrefs":{"Monarch":{"xref_id":"0001138"}}}


id: PBO:0114109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WDC repeat subunit Swd1","termid":"PBO:0114109"}


id: GO:1903585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["GO_REF:0000058","PMID:24526689","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deubiquitination (obsolete GO:1903585)","synonyms":[{"name":"down regulation of histone deubiquitination","type":"exact"},{"name":"down regulation of histone deubiquitinylation","type":"exact"},{"name":"down regulation of histone deubiquitylation","type":"exact"},{"name":"down-regulation of histone deubiquitination","type":"exact"},{"name":"down-regulation of histone deubiquitinylation","type":"exact"},{"name":"down-regulation of histone deubiquitylation","type":"exact"},{"name":"downregulation of histone deubiquitination","type":"exact"},{"name":"downregulation of histone deubiquitinylation","type":"exact"},{"name":"downregulation of histone deubiquitylation","type":"exact"},{"name":"inhibition of histone deubiquitination","type":"narrow"},{"name":"inhibition of histone deubiquitinylation","type":"narrow"},{"name":"inhibition of histone deubiquitylation","type":"narrow"},{"name":"negative regulation of histone deubiquitinylation","type":"exact"},{"name":"negative regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903585"}


id: MOD:00387
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form 2-tetrahydropyridinyl-5-imidazolinone glycine.","definition_xrefs":["RESID:AA0382","PubMed:10504696","PubMed:15628861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-tetrahydropyridinyl-5-imidazolinone glycine","synonyms":[{"name":"2-(3,4,5,6-tetrahydropyridin-2-yl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-(tetrahydropyrid-2-yl)-5-imidazolinone glycine","type":"exact"},{"name":"2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"},{"name":"CROSSLNK 2-tetrahydro-2-pyridyl-5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"Zoanthus sp. fluorescent protein zFP538 chromophore","type":"exact"},{"name":"[5-oxo-2-(3,4,5,6-tetrahydropyridin-2-yl)-4,5-dihydro-1H-imidazol-1-yl]acetic acid","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00387"}


id: MONDO:0700171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in a horse.","definition_xrefs":["NCIT:C134569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"},{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horse melanoma","secondary_identifiers":["OMIA:002231-9796"],"termid":"MONDO:0700171","xrefs":{"Monarch":{"xref_id":"0700171"}}}


id: PBO:0045418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 3","termid":"PBO:0045418"}


id: GO:0070835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chromium (Cr) ions from one side of a membrane to the other.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"chromium ion transmembrane transporter activity","termid":"GO:0070835"}


id: PBO:0069515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 784, pseudogene","termid":"PBO:0069515"}


id: PBO:0059678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 44","termid":"PBO:0059678"}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["PMID:9082980","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: GO:0097527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.","definition_xrefs":["PMID:20823910","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"necroptotic signaling pathway","synonyms":[{"name":"necroptosis signaling","type":"related"},{"name":"necroptosis signaling pathway","type":"exact"},{"name":"necroptotic signal transduction","type":"exact"},{"name":"necroptotic signalling pathway","type":"related"}],"termid":"GO:0097527"}


id: PBO:0086909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; positive regulation by Lys14p suggests that lysine may be the primary substrate; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; RTC2 has a paralog, YPQ1, that arose from the whole genome duplication","termid":"PBO:0086909"}


id: MONDO:0002902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudohypoparathyroidism (obsolete MONDO:0002902)","termid":"MONDO:0002902","xrefs":{"Monarch":{"xref_id":"0002902"}}}


id: GO:0033423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"CCA codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033423"}


id: FYPO:0005072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"},{"relation_name":"is_a","term_name":"normal protein localization to centromere during vegetative growth","termid":"FYPO:0002574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin","synonyms":[{"name":"normal protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere","type":"exact"}],"termid":"FYPO:0005072"}


id: PBO:0035909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere_during_vegetative_growth","termid":"PBO:0035909"}


id: MONDO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An upper respiratory tract disease which involves inflammation of both larynx and pharynx.","definition_xrefs":["DOID:11195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute laryngopharyngitis","secondary_identifiers":["ICD10CM:J06.0","MEDGEN:510095","ICD9:465.0","icd11.foundation:1528782604","UMLS:C0155817","SCTID:55355000"],"termid":"MONDO:0001218","xrefs":{"Monarch":{"xref_id":"0001218"}}}


id: PBO:0067676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 861, pseudogene","termid":"PBO:0067676"}


id: PBO:0116909
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is usually silenced in S. pombe","termid":"PBO:0116909"}


id: SO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The first base to be translated into protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_start","synonyms":[{"name":"coding start","type":"exact"},{"name":"translation initiation site","type":"exact"},{"name":"translation start","type":"related"}],"termid":"SO:0000323"}


id: GO:0035223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation in the leg imaginal disc.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"part_of","term_name":"leg disc development","termid":"GO:0035218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc pattern formation","termid":"GO:0035223"}


id: GO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).","definition_xrefs":["PMID:4975589","PMID:4992177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain development","synonyms":[{"name":"rhombencephalon development","type":"exact"}],"termid":"GO:0030902"}


id: MONDO:1010249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia telangiectasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia telangiectasia, non-human animal","secondary_identifiers":["OMIA:002044"],"termid":"MONDO:1010249","xrefs":{"Monarch":{"xref_id":"1010249"}}}


id: GO:0000027
data:
  {"annotated_genes":["SJAG_00722","SJAG_04599","SJAG_00231","SJAG_02759","SJAG_04395","SJAG_03496","SJAG_02891","SJAG_03080","SJAG_04304","SJAG_01122","SJAG_03466","SJAG_00659","SJAG_00689","SJAG_02830","SJAG_04180","SJAG_03773","SJAG_00882","SJAG_04992","SJAG_01420","SJAG_04940","SJAG_02427","SJAG_03012","SJAG_01454","SJAG_02508","SJAG_02436","SJAG_01568","SJAG_04066","SJAG_01606","SJAG_03458","SJAG_01365","SJAG_00949","SJAG_02952","SJAG_01161","SJAG_00323","SJAG_04669","SJAG_02868","SJAG_02840","SJAG_01339","SJAG_05248","SJAG_01839","SJAG_01811","SJAG_03971","SJAG_04492","SJAG_02535","SJAG_04108","SJAG_04004","SJAG_05679","SJAG_02754","SJAG_03155"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64941,67327,72873,73894,74173,74515,92921,92923],"is_not":false,"summary":null,"term":"GO:0000027"},{"annotations":[81275,101105,118675,102672,91505,99900,57344,109412,114146,114909,102532,120949,117799,94698,94279,57991,102338,107972,104468,105454,112804,110996,117800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[93990,106767,112730,106081,112731,99901,96747,106233,107182,118599,118600,98988,104469,89518,106001,101389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180023"},{"annotations":[113995,103229,109170,110366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902775"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.","definition_xrefs":["PMID:30467428","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosome assembly","termid":"GO:0042255"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00231":null,"SJAG_00323":null,"SJAG_00659":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01365":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02891":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03773":null,"SJAG_03971":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"ribosomal large subunit assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"50S ribosomal subunit assembly","type":"narrow"},{"name":"60S ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0000027","terms_by_termid":{"GO:0000027":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0083919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; involved in synthesis of long-chain dolichols (19-22 isoprene units; as opposed to Rer2p which synthesizes shorter-chain dolichols); localizes to lipid bodies; transcription is induced during stationary phase","termid":"PBO:0083919"}


id: PBO:0109954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III regulator Alx1","termid":"PBO:0109954"}


id: GO:0060172
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78032],"is_not":false,"summary":null,"term":"GO:0060172"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an astral microtubule. An astral microtubule is any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"astral microtubule depolymerization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0060172","terms_by_termid":{"GO:0060172":null}}


id: GO:0106305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannogen, a mannose-containing polysaccharide that is a major energy reserve in Leishmania.","definition_xrefs":["PMID:12902334","PMID:31662278","PMID:31513773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"mannogen metabolic process","termid":"GO:0106303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannogen catabolic process","synonyms":[{"name":"beta-1,2-mannan catabolic process","type":"related"},{"name":"beta-1,2-mannan catabolism","type":"related"},{"name":"mannogen breakdown","type":"related"},{"name":"mannogen catabolism","type":"related"},{"name":"mannogen degradation","type":"related"}],"termid":"GO:0106305"}


id: MONDO:0007490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carpotarsal osteochondromatosis is a very rare primary bone dysplasia disorder characterized by abnormal bone proliferation and osteochondromas in the upper and lower limbs.","definition_xrefs":["Orphanet:2767"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpotarsal osteochondromatosis","secondary_identifiers":["OMIM:127820","GARD:1128","MEDGEN:377557","UMLS:C1851956","icd11.foundation:1406756925","MESH:C565076","SCTID:389272007"],"synonyms":[{"name":"Maroteaux Le Merrer Bensahel syndrome","type":"related"},{"name":"Maroteaux-Le Merrer-Bensahel syndrome","type":"exact"},{"name":"dominant carpotarsal osteochondromatosis","type":"related"},{"name":"dysplasia epiphysealis hemimelica with CHONDROMAS and osteochondromas","type":"related"},{"name":"osteochondromatosis, dominant carpotarsal","type":"related"}],"termid":"MONDO:0007490","xrefs":{"Monarch":{"xref_id":"0007490"}}}


id: MONDO:0012085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAH5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 3","secondary_identifiers":["NCIT:C172392","OMIM:608644","DOID:0110599","MEDGEN:325210","MESH:C535278","UMLS:C1837618","GARD:15436"],"synonyms":[{"name":"CILD3","type":"exact"},{"name":"DNAH5 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 3","type":"related"},{"name":"ciliary dyskinesia, primary, 3, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 3","type":"exact"},{"name":"primary ciliary dyskinesia 3","type":"exact"},{"name":"primary ciliary dyskinesia 3 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAH5","type":"exact"},{"name":"primary ciliary dyskinesia type 3","type":"exact"}],"termid":"MONDO:0012085","xrefs":{"Monarch":{"xref_id":"0012085"}}}


id: PBO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lysine methyltransferase Set11","termid":"PBO:0005666"}


id: MONDO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"balanoposthitis","termid":"MONDO:0001618"},{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas balanoposthitis","secondary_identifiers":["UMLS:C0341769","MEDGEN:83327","NCIT:C35406"],"synonyms":[{"name":"Trichomonas balanoposthitis","type":"exact"}],"termid":"MONDO:0030707","xrefs":{"Monarch":{"xref_id":"0030707"}}}


id: PBO:0085320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; role in secretion; localizes to the endoplasmic reticulum via the C-terminal tail; lacks the Sac1 domain and proline-rich region found in the other 3 INP proteins","termid":"PBO:0085320"}


id: GO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CDP metabolic process","termid":"GO:0046704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CDP catabolic process","synonyms":[{"name":"CDP breakdown","type":"exact"},{"name":"CDP catabolism","type":"exact"},{"name":"CDP degradation","type":"exact"}],"termid":"GO:0046706"}


id: FYPO:0004274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus does not occur.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished ascospore release from ascus","synonyms":[{"name":"absent ascospore release from ascus","type":"exact"},{"name":"ascospore release from ascus abolished","type":"exact"}],"termid":"FYPO:0004274"}


id: PBO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 32","termid":"PBO:0061372"}


id: MOD:01234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate","definition_xrefs":["PubMed:11467524","Unimod:258#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O monosubstituted residue","termid":"MOD:00581"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted L-serine","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"}],"termid":"MOD:01234"}


id: GO:0000301
data:
  {"annotated_genes":["SJAG_00041","SJAG_00578","SJAG_01071","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90839,93037,111490,118860],"is_not":false,"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The retrograde movement of substances within the Golgi, mediated by COP I vesicles. Cis-Golgi vesicles are constantly moving forward through the Golgi stack by cisternal progression, eventually becoming trans-Golgi vesicles. They then selectively transport membrane and luminal proteins from the trans- to the medial-Golgi while leaving others behind in the trans-Golgi cisternae; similarly, they selectively move proteins from the medial- to the cis-Golgi.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde transport, vesicle recycling within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (vesicle recycling within Golgi) transport","type":"exact"}],"termid":"GO:0000301","terms_by_termid":{"GO:0000301":null}}


id: PBO:0062225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AU member 1","termid":"PBO:0062225"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["GOC:bhm","PMID:30621730","PMID:9168977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: PBO:0042156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 17","termid":"PBO:0042156"}


id: PBO:0057925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3650","termid":"PBO:0057925"}


id: MONDO:0015779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"45,X/46,XY mixed gonadal dysgenesis (45,X/46,XY MGD) is a disorder of sex development (DSD) associated with a numerical sex chromosome abnormality resulting from Y-chromosome mosaicism and leading to abnormal gonadal development.","definition_xrefs":["Orphanet:1772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"45,X/46,XY mixed gonadal dysgenesis","secondary_identifiers":["NANDO:2200388","NCIT:C120199","DOID:0080656","GARD:18747"],"synonyms":[{"name":"45,X/46,XY MGD","type":"exact"},{"name":"45,X/46,XY disorder of Sex development","type":"exact"},{"name":"45,X/46,XY gonadal dysgenesis","type":"exact"},{"name":"45,X0/46,XY MGD","type":"exact"},{"name":"45,X0/46,XY mixed gonadal dysgenesis","type":"exact"},{"name":"Mixed gonadal dysgenesis","type":"exact"},{"name":"XY/X0","type":"exact"}],"termid":"MONDO:0015779","xrefs":{"Monarch":{"xref_id":"0015779"}}}


id: GO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate = NADH + CO2 + catechol.","definition_xrefs":["EC:1.3.1.25","MetaCyc:1.3.1.25-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["RHEA:11560"],"synonyms":[{"name":"(1R,6R)-1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"2-hydro-1,2-dihydroxybenzoate dehydrogenase activity","type":"related"},{"name":"3,5-cyclohexadiene-1,2-diol-1-carboxylate dehydrogenase activity","type":"related"},{"name":"3,5-cyclohexadiene-1,2-diol-1-carboxylic acid dehydrogenase activity","type":"related"},{"name":"DHB dehydrogenase activity","type":"related"},{"name":"DHBDH activity","type":"related"},{"name":"cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate:NAD(+) oxidoreductase activity","type":"related"},{"name":"cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrodihydroxybenzoate dehydrogenase activity","type":"related"}],"termid":"GO:0047116"}


id: GO:0060710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell-cell adhesion process in which the cells of the chorion fuse to the cells of the allantois.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"chorio-allantoic fusion","termid":"GO:0060710"}


id: PBO:0074644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36A","termid":"PBO:0074644"}


id: PBO:0050204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 21","termid":"PBO:0050204"}


id: PBO:0028857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_mRNA_introns_with_low_A/U_content_and_polypyrimidine_tracts_distal_to_branch_site","termid":"PBO:0028857"}


id: PBO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLE1 RNA export mediator","termid":"PBO:0048680"}


id: MONDO:0800047
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88482],"is_not":false,"summary":null,"term":"MONDO:0800047"}]},"cv_name":"mondo","definition":"Any autosomal dominant macrothrombocytopenia in which the cause of the disease is a mutation in the TUBB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant macrothrombocytopenia","termid":"MONDO:0015372"},{"relation_name":"is_a","term_name":"macrothrombocytopenia, isolated","termid":"MONDO:0031447"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia, isolated, 1, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567747","GARD:18271","UMLS:C5676892","DOID:0090102","OMIM:613112","MEDGEN:1811721"],"synonyms":[{"name":"MACTHC1","type":"exact"},{"name":"TUBB1 autosomal dominant macrothrombocytopenia","type":"exact"},{"name":"autosomal dominant macrothrombocytopenia TUBB1-related","type":"related"},{"name":"autosomal dominant macrothrombocytopenia caused by mutation in TUBB1","type":"exact"},{"name":"macrothrombocytopenia, autosomal dominant, TUBB1-related","type":"exact"}],"termid":"MONDO:0800047","terms_by_termid":{"MONDO:0800047":null},"xrefs":{"Monarch":{"xref_id":"0800047"}}}


id: PBO:0050159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 15","termid":"PBO:0050159"}


id: MONDO:0019379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete st. Louis encephalitis (obsolete MONDO:0019379)","termid":"MONDO:0019379","xrefs":{"Monarch":{"xref_id":"0019379"}}}


id: GO:0008358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}


id: MONDO:0958351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare form of composite dysraphism characterized by the presence of a split cord malformation and a myeloschisis on one of the two hemicords. Hemicords can be in a single dural sac or in two separated dural sacs. Other spinal cord malformations can be associated. Due to the comparable prognosis it is considered as a subtype of myeloschisis.","definition_xrefs":["Orphanet:645393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloschisis","termid":"MONDO:0958076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hemi-myeloschisis","secondary_identifiers":["MEDGEN:1853138","UMLS:C5816709"],"termid":"MONDO:0958351","xrefs":{"Monarch":{"xref_id":"0958351"}}}


id: PBO:0059544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (UUA/G) 1","termid":"PBO:0059544"}


id: FYPO:0007579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in the medial membrane band is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0032178","PomBase:mah","PMID:15517003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal plasma membrane sterol distribution","termid":"FYPO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal medial membrane band sterol distribution","synonyms":[{"name":"normal medial membrane band sterol distribution during mitotic cell cycle","type":"related"},{"name":"normal medial membrane band sterol distribution during vegetative growth","type":"exact"},{"name":"normal medial membrane domain sterol distribution","type":"exact"}],"termid":"FYPO:0007579"}


id: MONDO:1010912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:000679-9685"],"termid":"MONDO:1010912","xrefs":{"Monarch":{"xref_id":"1010912"}}}


id: GO:0022839
data:
  {"annotated_genes":["SJAG_03895","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74800,81628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens in response to a specific ion stimulus.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic ion-gated channel activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ion gated channel activity","type":"broad"},{"name":"monoatomic ion gated channel activity","type":"exact"}],"termid":"GO:0022839","terms_by_termid":{"GO:0005227":null}}


id: PBO:0084530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); NTC contains Prp19p and stabilizes U6 snRNA in catalytic forms of spliceosome containing U2, U5, and U6 snRNAs; interacts with Prp16p to modulate splicing fidelity; isy1 syf2 cells have defective spindles","termid":"PBO:0084530"}


id: PBO:0087629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Dcp1p-Dcp2p decapping enzyme complex; decapping complex removes the 5' cap structure from mRNAs prior to their degradation; enhances the activity of catalytic subunit Dcp2p; regulated by DEAD box protein Dhh1p; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0087629"}


id: MONDO:0958128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis obliterans syndrome","termid":"MONDO:0015265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-transplant-related bronchiolitis obliterans","secondary_identifiers":["MEDGEN:1863569","UMLS:C5925142","Orphanet:658612"],"termid":"MONDO:0958128","xrefs":{"Monarch":{"xref_id":"0958128"}}}


id: MONDO:0013469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the MERTK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"MERTK-related retinopathy","termid":"MONDO:0800394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 38","secondary_identifiers":["ICD10CM:H35.5","DOID:0110367","GARD:15725","OMIM:613862","MEDGEN:462578","UMLS:C3151228"],"synonyms":[{"name":"MERTK retinitis pigmentosa","type":"exact"},{"name":"RP38","type":"exact"},{"name":"Rod-cone dystrophy, childhood-onset","type":"related"},{"name":"retinitis pigmentosa 38","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in MERTK","type":"exact"},{"name":"retinitis pigmentosa type 38","type":"exact"}],"termid":"MONDO:0013469","xrefs":{"Monarch":{"xref_id":"0013469"}}}


id: PBO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein (predicted)","termid":"PBO:0001123"}


id: PBO:0042065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 134","termid":"PBO:0042065"}


id: MONDO:0044258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methane production (obsolete MONDO:0044258)","secondary_identifiers":["OMIM:250650"],"synonyms":[{"name":"methane production","type":"related"}],"termid":"MONDO:0044258","xrefs":{"Monarch":{"xref_id":"0044258"}}}


id: MONDO:0014931
data:
  {"annotated_genes":["SJAG_04274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89011],"is_not":false,"summary":null,"term":"MONDO:0014931"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04274":null},"genotype_count":0,"is_obsolete":false,"name":"Alazami-Yuan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934669","OMIM:617126","UMLS:C4310702"],"synonyms":[{"name":"ALYUS","type":"exact"},{"name":"Alazami-Yuan syndrome","type":"exact"},{"name":"Alazami-Yuan syndrome; ALYUS","type":"exact"}],"termid":"MONDO:0014931","terms_by_termid":{"MONDO:0014931":null},"xrefs":{"Monarch":{"xref_id":"0014931"}}}


id: PBO:0085356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphomevalonate kinase; an essential cytosolic enzyme that acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate","termid":"PBO:0085356"}


id: GO:0070249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"positively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell apoptotic process","synonyms":[{"name":"activation of natural killer cell apoptosis","type":"narrow"},{"name":"positive regulation of NK cell apoptosis","type":"exact"},{"name":"positive regulation of natural killer cell apoptosis","type":"narrow"},{"name":"stimulation of natural killer cell apoptosis","type":"narrow"},{"name":"up regulation of natural killer cell apoptosis","type":"exact"},{"name":"up-regulation of natural killer cell apoptosis","type":"exact"},{"name":"upregulation of natural killer cell apoptosis","type":"exact"}],"termid":"GO:0070249"}


id: PBO:0056085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 86","termid":"PBO:0056085"}


id: GO:0060381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of single-stranded telomeric DNA binding.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of single-stranded telomeric DNA binding (obsolete GO:0060381)","synonyms":[{"name":"positive regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060381"}


id: GO:0010383
data:
  {"annotated_genes":["SJAG_00876","SJAG_04462","SJAG_04668","SJAG_04236","SJAG_04864","SJAG_05001","SJAG_03123","SJAG_03646","SJAG_04771","SJAG_01787","SJAG_04666","SJAG_04659","SJAG_04483","SJAG_04184","SJAG_01255","SJAG_03057","SJAG_01835","SJAG_02222","SJAG_01028","SJAG_01017","SJAG_01288","SJAG_00218","SJAG_05285","SJAG_01453","SJAG_00610","SJAG_03587","SJAG_02916","SJAG_01290","SJAG_01171","SJAG_04327","SJAG_02278","SJAG_00424","SJAG_00667","SJAG_02192","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[102085,95915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[75119,73177,80560,72388,75291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[93490,115173,117841,74766,76285,72818,77638,108074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104588,80008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[97014,110047,103889,103888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[74286,108666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071966"},{"annotations":[94313,89378],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[107883,92652,94297,107309,69405,119939,120072],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[94319,104796,91318,96850],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall polysaccharides.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00667":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04327":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"cell wall polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010383","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0044347":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071966":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0047509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 1","termid":"PBO:0047509"}


id: PBO:0046221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 14","termid":"PBO:0046221"}


id: PBO:0028195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_azetidine-2-carboxylic_acid_acetyltransferase_activity","termid":"PBO:0028195"}


id: PBO:0074895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 70","termid":"PBO:0074895"}


id: GO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.","definition_xrefs":["EC:3.2.1.55","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha-L-arabinofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.55-RXN"],"synonyms":[{"name":"L-arabinosidase activity","type":"related"},{"name":"alpha-L-arabinanase activity","type":"related"},{"name":"alpha-L-arabinofuranoside arabinofuranohydrolase activity","type":"related"},{"name":"alpha-L-arabinofuranoside hydrolase activity","type":"related"},{"name":"alpha-L-arabinosidase activity","type":"related"},{"name":"alpha-N-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinosidase activity","type":"related"},{"name":"arabinofuranosidase activity","type":"related"},{"name":"arabinosidase activity","type":"related"},{"name":"polysaccharide alpha-L-arabinofuranosidase activity","type":"exact"}],"termid":"GO:0046556"}


id: GO:0042195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the presence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallate catabolic process","termid":"GO:0019396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic gallate catabolic process","synonyms":[{"name":"aerobic gallate breakdown","type":"exact"},{"name":"aerobic gallate catabolism","type":"exact"},{"name":"aerobic gallate degradation","type":"exact"},{"name":"aerobic gallic acid catabolic process","type":"exact"},{"name":"aerobic gallic acid catabolism","type":"exact"}],"termid":"GO:0042195"}


id: PBO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase like","termid":"PBO:0042806"}


id: PBO:0048959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein 2","termid":"PBO:0048959"}


id: GO:0018925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-cresol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mcr"],"synonyms":[{"name":"3-hydroxytoluene metabolic process","type":"exact"},{"name":"3-hydroxytoluene metabolism","type":"exact"},{"name":"m-cresol metabolism","type":"exact"},{"name":"meta-cresol metabolic process","type":"exact"},{"name":"meta-cresol metabolism","type":"exact"}],"termid":"GO:0018925"}


id: PBO:0051118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-3 (pseudogene)","termid":"PBO:0051118"}


id: PBO:0065649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type C","termid":"PBO:0065649"}


id: PBO:0038428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,3-galactosyltransferase 2","termid":"PBO:0038428"}


id: PBO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT homolog 1","termid":"PBO:0003304"}


id: FYPO:0006848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of RNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased total RNA level during vegetative growth","synonyms":[{"name":"decreased total RNA accumulation during vegetative growth","type":"related"},{"name":"decreased total RNA content during vegetative growth","type":"exact"},{"name":"decreased total RNA level during mitotic cell cycle","type":"related"},{"name":"reduced total RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006848"}


id: MOD:00666
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an octanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"octanoylated residue","synonyms":[{"name":"OctRes","type":"exact"}],"termid":"MOD:00666"}


id: PBO:0085618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early stages of meiotic recombination; possibly involved in the coordination of recombination and meiotic division; mutations lead to premature initiation of the first meiotic division","termid":"PBO:0085618"}


id: MONDO:0000678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize a whole image or scene while retaining the ability to recognize objects or details in their visual field one at a time.","definition_xrefs":["DOID:0060148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simultanagnosia","secondary_identifiers":["icd11.foundation:1669328667","MEDGEN:415993","UMLS:C2827429"],"termid":"MONDO:0000678","xrefs":{"Monarch":{"xref_id":"0000678"}}}


id: GO:1902331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA strand elongation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand elongation involved in bacterial-type DNA replication (obsolete GO:1902331)","termid":"GO:1902331"}


id: GO:1901202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix assembly","termid":"GO:1901201"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix assembly","synonyms":[{"name":"down regulation of extracellular matrix assembly","type":"exact"},{"name":"down-regulation of extracellular matrix assembly","type":"exact"},{"name":"downregulation of extracellular matrix assembly","type":"exact"},{"name":"inhibition of extracellular matrix assembly","type":"narrow"}],"termid":"GO:1901202"}


id: PBO:0041961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen and calcium binding EGF domains 1","termid":"PBO:0041961"}


id: PBO:0046590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 32, envelope","termid":"PBO:0046590"}


id: FYPO:0002614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to pre-autophagosomal structure","synonyms":[{"name":"abnormal protein localisation to PAS","type":"exact"},{"name":"abnormal protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"abnormal protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002614"}


id: GO:0042306
data:
  {"annotated_genes":["SJAG_03048","SJAG_02592","SJAG_01311","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[96270,104332,92732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01311":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein import into nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein import into cell nucleus","type":"exact"},{"name":"regulation of protein transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of protein-nucleus import","type":"exact"}],"termid":"GO:0042306","terms_by_termid":{"GO:0042307":null,"GO:0042308":null}}


id: FYPO:0006566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable under conditions of sulfur starvation.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability upon sulfur starvation","synonyms":[{"name":"normal cell population viability upon sulfur starvation","type":"exact"},{"name":"normal viability upon sulphur starvation","type":"exact"}],"termid":"FYPO:0006566"}


id: PBO:0051932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 4","termid":"PBO:0051932"}


id: PBO:0058945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 4","termid":"PBO:0058945"}


id: PBO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 80 pseudogene","termid":"PBO:0070166"}


id: PBO:0034414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_acts_on_population_of","termid":"PBO:0034414"}


id: GO:0021636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trigeminal nerve is generated and organized. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trigeminal nerve development","termid":"GO:0021559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve morphogenesis","synonyms":[{"name":"CN V morphogenesis","type":"related"}],"termid":"GO:0021636"}


id: PBO:0088824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lem2-Nur1 complex subunit Nur1","termid":"PBO:0088824"}


id: PBO:0060891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin and tolloid like 2","termid":"PBO:0060891"}


id: PBO:0060148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1","termid":"PBO:0060148"}


id: PBO:0058647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6776","termid":"PBO:0058647"}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: MONDO:0014554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile multisystem neurologic-endocrine-pancreatic disease (obsolete MONDO:0014554)","termid":"MONDO:0014554","xrefs":{"Monarch":{"xref_id":"0014554"}}}


id: PBO:0055917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A5, pseudogene","termid":"PBO:0055917"}


id: PBO:0087199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharopine dehydrogenase (NAD+, L-lysine-forming); catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway; also has mRNA binding activity","termid":"PBO:0087199"}


id: MONDO:0015725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 14 is a rare chromosomal disorder in which there are 3 copies (trisomy) of chromosome 14 in some cells of the body, while other cells have the usual two copies. The extent and severity of features in affected individuals can vary. Signs and symptoms that have been most commonly reported include intrauterine growth restriction ; failure to to thrive ; developmental delay; intellectual disability; distinctive facial characteristics; structural malformations of the heart; and other physical abnormalities. This condition is most often caused by an error in cell division in the egg or sperm cell before conception, or in fetal cells after fertilization. Treatment is directed toward the specific signs and symptoms in each individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 14 disorder","termid":"MONDO:0700021"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 14","secondary_identifiers":["NCIT:C116319","SCTID:764466009","Orphanet:1703","GARD:1327","MESH:C535489","MEDGEN:418947","UMLS:C2930917"],"synonyms":[{"name":"Mosaic trisomy chromosome 14","type":"related"},{"name":"Mosaic trisomy type 14","type":"exact"},{"name":"trisomy 14 mosaicism","type":"related"}],"termid":"MONDO:0015725","xrefs":{"Monarch":{"xref_id":"0015725"}}}


id: GO:1900474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8625408","PMID:8625409","GOC:dgf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900474)","termid":"GO:1900474"}


id: GO:1905841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxidopamine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:rz","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to catecholamine","termid":"GO:0071869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidopamine","termid":"GO:1905841"}


id: GO:0102173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-methylenecycloartanol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-ergost-24(241)-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 24-methylenecycloartanol 4alpha-methyl oxidase activity (obsolete GO:0102173)","termid":"GO:0102173"}


id: MONDO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 72","secondary_identifiers":["UMLS:C5193063","OMIM:618374","DOID:0112208","MEDGEN:1681879"],"synonyms":[{"name":"DEE72","type":"exact"},{"name":"EIEE72","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 72","type":"exact"},{"name":"developmental and epileptic encephalopathy 72","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 72","type":"exact"}],"termid":"MONDO:0032710","xrefs":{"Monarch":{"xref_id":"0032710"}}}


id: SO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 18th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K18_acetylation_site","synonyms":[{"name":"H3K18 acetylation site","type":"exact"},{"name":"H3K18ac","type":"exact"}],"termid":"SO:0001718"}


id: GO:0033254
data:
  {"annotated_genes":["SJAG_01080","SJAG_01319","SJAG_03442"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74589,80391,108646],"is_not":false,"summary":null,"term":"GO:0033254"}]},"cv_name":"cellular_component","definition":"A protein complex that contains four related proteins that have been implicated in several membrane-related processes, such as sorting of H+-translocating ATPases, endocytosis, ER-Golgi trafficking, vacuole fusion, vacuolar polyphosphate homeostasis and the microautophagic scission of vesicles into the vacuolar lumen. The complex is enriched at the vacuolar membrane, but also found in other cellular compartments, including the ER and the cell periphery. In Saccharomyces, the subunits are Vtc1p, Vtc2p, Vtc3p and Vtc4p.","definition_xrefs":["PMID:17079729","PMID:11823419","PMID:34544285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01080":null,"SJAG_01319":null,"SJAG_03442":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vacuolar transporter chaperone complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"VTC complex","type":"exact"}],"termid":"GO:0033254","terms_by_termid":{"GO:0033254":null}}


id: MONDO:0019583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized lichen myxedematosus (LM) with mixed features of different subtypes is a form of atypical lichen myxedematosus, characterized by mixed features of the 5 subtypes of localized LM which are: discrete papular LM, acral persistent papular mucinosis, self-healing papular mucinosis, papular mucinosis of infancy, and nodular LM.","definition_xrefs":["Orphanet:90398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"localized lichen myxedematosus with mixed features of different subtypes","secondary_identifiers":["MEDGEN:1843441","GARD:19142","UMLS:C5681465"],"termid":"MONDO:0019583","xrefs":{"Monarch":{"xref_id":"0019583"}}}


id: PBO:0085970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potentially phosphorylated by Cdc28p; YER158C has a paralog, AFR1, that arose from the whole genome duplication","termid":"PBO:0085970"}


id: PBO:0047918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(10)(q21)","termid":"PBO:0047918"}


id: PBO:0045338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 11","termid":"PBO:0045338"}


id: GO:0045061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in the thymus.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymic T cell selection","synonyms":[{"name":"thymic T lymphocyte selection","type":"exact"},{"name":"thymic T-cell selection","type":"exact"},{"name":"thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045061"}


id: PBO:0085979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; protein abundance increases in response to DNA replication stress","termid":"PBO:0085979"}


id: GO:0050352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + trimethylamine N-oxide = dimethylamine + formaldehyde.","definition_xrefs":["EC:4.1.2.32","RHEA:20217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"trimethylamine-oxide aldolase activity","secondary_identifiers":["KEGG_REACTION:R02512","UM-BBD_reactionID:r1409","MetaCyc:TRIMETHYLAMINE-OXIDE-ALDOLASE-RXN"],"synonyms":[{"name":"trimethylamine N-oxide aldolase activity","type":"related"},{"name":"trimethylamine N-oxide demethylase activity","type":"related"},{"name":"trimethylamine N-oxide formaldehyde-lyase activity","type":"related"},{"name":"trimethylamine-N-oxide formaldehyde-lyase (dimethylamine-forming)","type":"related"},{"name":"trimethylamine-N-oxide formaldehyde-lyase activity","type":"related"}],"termid":"GO:0050352"}


id: GO:0072145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an S1 cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 cell differentiation","termid":"GO:0072062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell development","synonyms":[{"name":"S1 cell development","type":"exact"}],"termid":"GO:0072145"}


id: MONDO:0013915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the KISS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 13 with or without anosmia","secondary_identifiers":["MEDGEN:762090","UMLS:C3541462","DOID:0090073","OMIM:614842","GARD:18601","ICD10CM:E23.0"],"synonyms":[{"name":"HH13","type":"related"},{"name":"KISS1 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 13 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in KISS1","type":"exact"}],"termid":"MONDO:0013915","xrefs":{"Monarch":{"xref_id":"0013915"}}}


id: GO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cibarial fish-trap bristle are generated and organized. A cibarial fish-trap bristle is a sensory bristle on the anterior plate of the cibarium.","definition_xrefs":["GOC:rc","FBbt:00004136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chaeta morphogenesis","termid":"GO:0008407"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"cibarial fish-trap bristle development","termid":"GO:0048725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cibarial fish-trap bristle morphogenesis","synonyms":[{"name":"fish trap bristle morphogenesis","type":"related"}],"termid":"GO:0048718"}


id: PBO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1 (predicted)","termid":"PBO:0032766"}


id: MONDO:0011502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wolfram syndrome in which the cause of the disease is a mutation in the CISD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Wolfram syndrome","termid":"MONDO:0018105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolfram syndrome 2","secondary_identifiers":["MESH:C565733","OMIM:604928","MEDGEN:347604","UMLS:C1858028","DOID:0110630","GARD:15374"],"synonyms":[{"name":"CISD2 Wolfram syndrome","type":"exact"},{"name":"WFS2","type":"exact"},{"name":"WOLFRAM syndrome 2","type":"related"},{"name":"Wolfram syndrome 2","type":"exact"},{"name":"Wolfram syndrome caused by mutation in CISD2","type":"exact"},{"name":"Wolfram syndrome type 2","type":"exact"}],"termid":"MONDO:0011502","xrefs":{"Monarch":{"xref_id":"0011502"}}}


id: PBO:0039058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 7","termid":"PBO:0039058"}


id: MONDO:0007789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophia musculorum vera","secondary_identifiers":["MEDGEN:374451","MESH:C564152","OMIM:145800","UMLS:C1840361"],"synonyms":[{"name":"hypertrophia musculorum vera","type":"exact"}],"termid":"MONDO:0007789","xrefs":{"Monarch":{"xref_id":"0007789"}}}


id: PBO:0083766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential N-acetylglucosamine-phosphate mutase; converts GlcNAc-6-P to GlcNAc-1-P, which is a precursor for the biosynthesis of chitin and for the formation of N-glycosylated mannoproteins and glycosylphosphatidylinositol anchors","termid":"PBO:0083766"}


id: FYPO:0006751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:29632066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K4 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 trimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K4 trimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"increased histone H3K4me3 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006751"}


id: GO:0061417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:9767597","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0061417)","termid":"GO:0061417"}


id: PR:O94543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp1322 gene.","definition_xrefs":["UniProtKB:O94543","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1322.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.03","synonyms":[{"name":"Spom972h-trp1322","type":"exact"}],"termid":"PR:O94543"}


id: MONDO:0007678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein, renal (obsolete MONDO:0007678)","secondary_identifiers":["OMIM:138710"],"synonyms":[{"name":"glycoprotein, renal","type":"exact"}],"termid":"MONDO:0007678","xrefs":{"Monarch":{"xref_id":"0007678"}}}


id: SO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene (or the product of other non coding RNA genes). Micro RNAs are produced from precursor molecules (SO:0001244) that can form local hairpin structures, which ordinarily are processed (usually via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.","definition_xrefs":["PMID:12592000","PMID:11081512"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA","secondary_identifiers":["SO:0000649","http://en.wikipedia.org/wiki/StRNA","http://en.wikipedia.org/wiki/MiRNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:miRNA","type":"exact"},{"name":"micro RNA","type":"exact"},{"name":"microRNA","type":"exact"},{"name":"small temporal RNA","type":"exact"},{"name":"stRNA","type":"exact"}],"termid":"SO:0000276"}


id: GO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.","definition_xrefs":["RESID:AA0075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dimethylation","termid":"GO:0018027"}


id: MONDO:0800100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by gain of function, heterozygous variants in the RDH12 gene, and associated with late onset retinopathy with a mild phenotype, characterized by nyctalopia and visual field loss, but relatively preserved central vision.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RDH12-related dominant retinopathy","synonyms":[{"name":"RDH12-related dominant retinopathy","type":"exact"}],"termid":"MONDO:0800100","xrefs":{"Monarch":{"xref_id":"0800100"}}}


id: PBO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps55 (predicted)","termid":"PBO:0000314"}


id: PBO:0070578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 44","termid":"PBO:0070578"}


id: MONDO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoid cystic carcinoma (obsolete MONDO:0003176)","termid":"MONDO:0003176","xrefs":{"Monarch":{"xref_id":"0003176"}}}


id: GO:2000964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cellooligosaccharide metabolic process","termid":"GO:2000961"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"negatively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"negative regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000964"}


id: MONDO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005713 (obsolete MONDO:0005713)","secondary_identifiers":["NANDO:2200890"],"termid":"MONDO:0005713","xrefs":{"Monarch":{"xref_id":"0005713"}}}


id: SO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000925 insert_GU (obsolete SO:0000925)","synonyms":[{"name":"insert GU","type":"exact"}],"termid":"SO:0000925"}


id: GO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic primary alcohol + O2 = an aromatic aldehyde + H2O2.","definition_xrefs":["MetaCyc:ARYL-ALCOHOL-OXIDASE-RXN","EC:1.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aryl-alcohol oxidase activity","secondary_identifiers":["RHEA:17541"],"synonyms":[{"name":"arom. alcohol oxidase activity","type":"related"},{"name":"aryl alcohol oxidase activity","type":"related"},{"name":"aryl-alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"veratryl alcohol oxidase activity","type":"narrow"}],"termid":"GO:0047682"}


id: GO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 member 1 taste receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor binding","termid":"GO:0031883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 member 1 taste receptor binding","synonyms":[{"name":"type 1 member 1 taste receptor ligand","type":"narrow"}],"termid":"GO:0031884"}


id: MONDO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anterior segment dysgenesis in which the cause of the disease is a mutation in the PXDN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"},{"relation_name":"is_a","term_name":"sclerocornea","termid":"MONDO:0019629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 7","secondary_identifiers":["Orphanet:289499","MEDGEN:462967","DOID:0080612","UMLS:C3151617","GARD:17327","OMIM:269400"],"synonyms":[{"name":"ASGD7","type":"related"},{"name":"CCMCO","type":"exact"},{"name":"COPOA","type":"related"},{"name":"PXDN anterior segment dysgenesis","type":"exact"},{"name":"PXDN-related ocular dysgenesis","type":"exact"},{"name":"anterior segment dysgenesis 7","type":"exact"},{"name":"anterior segment dysgenesis 7, with sclerocornea","type":"exact"},{"name":"anterior segment dysgenesis caused by mutation in PXDN","type":"exact"},{"name":"congenital cataract microcornea with corneal opacity","type":"related"},{"name":"corneal opacification and other ocular anomalies","type":"related"},{"name":"corneal opacification with Other ocular anomalies","type":"related"},{"name":"corneal opacification with other ocular anomalies","type":"related"},{"name":"sclerocornea with Other ocular anomalies","type":"related"},{"name":"sclerocornea with other ocular anomalies","type":"exact"}],"termid":"MONDO:0010015","xrefs":{"Monarch":{"xref_id":"0010015"}}}


id: PBO:0111495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EJC auxiliary factor, pinin ortholog Pnn1","termid":"PBO:0111495"}


id: MONDO:0019165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central precocious puberty (CPP), also referred to as gonadotropin dependent precocious puberty, is an endocrine-related developmental disease characterized by the onset of pubertal changes, with development of secondary sexual characteristics and accelerated growth and bone maturation, before the normal age of puberty (8 years in girls and 9 years in boys).","definition_xrefs":["Orphanet:759"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"precocious puberty in female","termid":"MONDO:0018561"},{"relation_name":"is_a","term_name":"precocious puberty","termid":"MONDO:0000088"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty","secondary_identifiers":["GARD:16546","icd11.foundation:1749914533","MEDGEN:90985","NANDO:2200377","SCTID:237816004","ICD9:259.1","MESH:C562787","OMIMPS:176400","EFO:0009029","Orphanet:650063","UMLS:C0342543","NANDO:1200381","DOID:0112308"],"synonyms":[{"name":"CPP","type":"exact"},{"name":"gonadotropin-dependant precocious puberty","type":"exact"},{"name":"gonadotropin-dependent precocious puberty","type":"exact"},{"name":"precocious puberty, central","type":"exact"}],"termid":"MONDO:0019165","xrefs":{"Monarch":{"xref_id":"0019165"}}}


id: PBO:0065795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2 pseudogene 1","termid":"PBO:0065795"}


id: MONDO:0002010
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"}]},"cv_name":"mondo","definition":"FG syndrome (FGS) is a genetic condition that affects many parts of the body and occurs almost exclusively in males. 'FG' represents the surname initials of the firstindividuals diagnosed with the disorder.People withFG syndrome frequently have intellectual disability ranging from mild to severe, hypotonia, constipation and/or anal anomalies, a distinctive facial appearance, broad thumbs and great toes,alarge head compared to body size (relative macrocephaly), and abnormalities of the corpus callosum. Medical problems including heart defects, seizures, undescended testicle, and an inguinal hernia have also been reported in some affected individuals. Researchers have identified five regions of the X chromosome that are linked to FG syndrome in affected families. Mutations in the MED12 gene appears to be the most common cause of this disorder, leading to FG syndrome 1. Other genes involved with FG syndrome include FLNA (FGS2), CASK (FGS4), UPF3B (FGS6), and BRWD3 (FGS7).FGS is inherited in an X-linked recessive pattern.Individualized early intervention and educational services are important so that each child can reach their fullest potential.","definition_xrefs":["GARD:0002317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"is_obsolete":false,"name":"FG syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:14711","UMLS:C0220769","EFO:0009297","OMIMPS:305450","Orphanet:323","icd11.foundation:156523187","SCTID:49984004","ICD9:759.89","MEDGEN:113106"],"synonyms":[{"name":"FGS","type":"related"},{"name":"FGS1","type":"narrow"},{"name":"Keller syndrome","type":"exact"},{"name":"Opitz-Kaveggia syndrome","type":"narrow"},{"name":"intellectual disability, large head, imperforate anus, congenital hypotonia, and partial agenesis of corpus callosum","type":"related"},{"name":"mental retardation, large head, imperforate anus, congenital hypotonia, and partial agenesis of corpus callosum","type":"related"}],"termid":"MONDO:0002010","terms_by_termid":{"MONDO:0010590":null},"xrefs":{"Monarch":{"xref_id":"0002010"}}}


id: PR:Q09812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.13","synonyms":[{"name":"Spom972h-atg22","type":"exact"}],"termid":"PR:Q09812"}


id: FYPO:0002747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-lysine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular lysine level","synonyms":[{"name":"normal cellular L-lysine level","type":"exact"},{"name":"normal cellular lysine level during mitotic cell cycle","type":"related"},{"name":"normal cellular lysine level during vegetative growth","type":"exact"},{"name":"normal level of lysine in cell","type":"exact"}],"termid":"FYPO:0002747"}


id: GO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte activation","termid":"GO:0046649"}


id: PBO:0110504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 8","termid":"PBO:0110504"}


id: GO:0019676
data:
  {"annotated_genes":["SJAG_03266","SJAG_04054","SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73905,96168,119764],"is_not":false,"summary":null,"term":"GO:0019676"}]},"cv_name":"biological_process","definition":"The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment, glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen.","definition_xrefs":["MetaCyc:AMMASSIM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_03266":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"ammonia assimilation cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:0019676","terms_by_termid":{"GO:0019676":null}}


id: MONDO:0021340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial dermatitis occurring on skin surfaces in contact with each other, such as the axillae, neck creases, intergluteal fold, between the toes, etc. Obesity is a predisposing factor. The condition is caused by moisture and friction and is characterized by erythema, maceration, burning, and exudation.","definition_xrefs":["MESH:D007402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"intertrigo","secondary_identifiers":["ICD9:695.89","SCTID:58759008","UMLS:C0021807","MEDGEN:43928"],"synonyms":[{"name":"Eczema intertrigo","type":"related"},{"name":"Erythema intertrigo","type":"related"},{"name":"Intertrigo","type":"related"}],"termid":"MONDO:0021340","xrefs":{"Monarch":{"xref_id":"0021340"}}}


id: GO:1902496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any protein binding that is involved in negative regulation of telomere maintenance via telomerase.","definition_xrefs":["PMID:24013504","GOC:dph","GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete protein binding involved in negative regulation of telomere maintenance via telomerase (obsolete GO:1902496)","synonyms":[{"name":"protein binding involved in down regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in down-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in downregulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in inhibition of telomere maintenance via telomerase","type":"narrow"}],"termid":"GO:1902496"}


id: SO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001053 nested_transposon (obsolete SO:0001053)","termid":"SO:0001053"}


id: PBO:0029049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_to_cell_cortex_during_nitrogen_starvation","termid":"PBO:0029049"}


id: GO:2000338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"regulation of CXCL1 production","type":"exact"},{"name":"regulation of KC production","type":"exact"},{"name":"regulation of SCYB1 production","type":"exact"},{"name":"regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000338"}


id: MONDO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A labyrinthitis which is a bacterial infectious disease of the inner ear, often causing deafness and loss of vestibular function. This is caused when bacteria spread to the inner ear during the course of severe acute otitis media, purulent meningitis, or an enlarging cholesteatoma.","definition_xrefs":["DOID:13534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purulent labyrinthitis","secondary_identifiers":["ICD9:386.33","icd11.foundation:479586656","MEDGEN:509995","UMLS:C0155506","SCTID:24817009"],"synonyms":[{"name":"acute suppurative labyrinthitis","type":"related"},{"name":"bacterial labyrinthitis","type":"exact"},{"name":"suppurative labyrinthitis","type":"exact"}],"termid":"MONDO:0001739","xrefs":{"Monarch":{"xref_id":"0001739"}}}


id: PBO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1","termid":"PBO:0090312"}


id: PBO:0091764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type region non-coding RNA","termid":"PBO:0091764"}


id: PBO:0058136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4435-2","termid":"PBO:0058136"}


id: PBO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 5","termid":"PBO:0043516"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: MONDO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by the triad of pancreatic fibrosis (and cysts, with a reduction of parenchymal tissue), renal dysplasia (with peripheral cortical cysts, primitive collecting ducts, glomerular cysts and metaplastic cartilage) and hepatic dysgenesis (enlarged portal areas containing numerous elongated binary profiles with a tendency to perilobular fibrosis). Situs abnormalities, skeletal anomalies and anencephaly have also been associated. Patients that survive the neonatal period present renal insufficiency, chronic jaundice and insulin-dependant diabetes.","definition_xrefs":["Orphanet:294415"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic visceral malformation (obsolete MONDO:0015214)","termid":"MONDO:0015214"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia","secondary_identifiers":["MEDGEN:382215","SCTID:763891005","UMLS:C2673883","OMIMPS:208540","GARD:17356","DOID:0060259"],"synonyms":[{"name":"Ivemark II syndrome","type":"exact"},{"name":"Ivemark's syndrome","type":"exact"},{"name":"Renohepaticopancreatic dysplasia","type":"exact"}],"termid":"MONDO:0017417","xrefs":{"Monarch":{"xref_id":"0017417"}}}


id: PBO:0042989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 2","termid":"PBO:0042989"}


id: PBO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion/proton antiporter Kha1 (predicted)","termid":"PBO:0001153"}


id: PBO:0039207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 1","termid":"PBO:0039207"}


id: PATO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000116 relative temperature sensitivity (obsolete PATO:0000116)","termid":"PATO:0000116"}


id: MONDO:0958076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of spina bifida/open neural tube defect (NTD) chacterized by absence of a cystic component, dysplastic meninges and neural placode exposed through a defect in the posterior vertebral arches (spina bifida) that are contiguous with surrounding skin. The placode is at or below the skin plane and is typically associated with a Chiari II malformation. It is usually isolated or rarely associated with split cord malformation.","definition_xrefs":["Orphanet:645398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myeloschisis","secondary_identifiers":["UMLS:C0266507","icd11.foundation:1547705800","MEDGEN:539965"],"termid":"MONDO:0958076","xrefs":{"Monarch":{"xref_id":"0958076"}}}


id: PBO:0074462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 2","termid":"PBO:0074462"}


id: PBO:0071042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 44","termid":"PBO:0071042"}


id: GO:0075162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075162)","synonyms":[{"name":"regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075162"}


id: GO:0032790
data:
  {"annotated_genes":["SJAG_03106","SJAG_04283","SJAG_05000","SJAG_02096","SJAG_00188","SJAG_00898","SJAG_04862","SJAG_03232","SJAG_01074","SJAG_03428","SJAG_01497","SJAG_03189","SJAG_02746"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72562,76312,105561,106665],"is_not":false,"summary":null,"term":"GO:0032790"},{"annotations":[116430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[105080,107602,79985,71597,78401,77130,118110,65367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03428":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribosome disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosome dissociation factor","type":"related"},{"name":"ribosome recycling","type":"narrow"}],"termid":"GO:0032790","terms_by_termid":{"GO:0032790":null,"GO:0072344":null,"GO:0140708":null}}


id: GO:1902651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GO_REF:0000058","GOC:di","PMID:22199252","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2A-H2B dimer displacement (obsolete GO:1902651)","synonyms":[{"name":"activation of histone H2A-H2B dimer displacement","type":"narrow"},{"name":"up regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"up-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"upregulation of histone H2A-H2B dimer displacement","type":"exact"}],"termid":"GO:1902651"}


id: PBO:0057956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3679","termid":"PBO:0057956"}


id: PBO:0056174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor","termid":"PBO:0056174"}


id: GO:0045016
data:
  {"annotated_genes":["SJAG_01639","SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79224],"is_not":false,"summary":null,"term":"GO:0045016"},{"annotations":[77365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The process in which a magnesium ion (Mg2+) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:ai","PMID:11254124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01639":null,"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1990614"],"synonyms":[{"name":"mitochondrial magnesium ion transport","type":"related"}],"termid":"GO:0045016","terms_by_termid":{"GO:0045016":null,"GO:1990616":null}}


id: PATO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fecundity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fecundity","termid":"PATO:0000273"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fecundity","synonyms":[{"name":"high fecundity","type":"exact"}],"termid":"PATO:0001695"}


id: GO:1904688
data:
  {"annotated_genes":["SJAG_00690","SJAG_03869","SJAG_02026","SJAG_02592","SJAG_02638","SJAG_01942","SJAG_02072","SJAG_04873","SJAG_00786","SJAG_00169","SJAG_04383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93198,114159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[77014,101262,111664,96264,117639,71694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[97138,105276,105911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational initiation.","definition_xrefs":["PMID:12242291","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"regulates","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"regulation of cytoplasmic translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1904688","terms_by_termid":{"GO:1904689":null,"GO:1990611":null,"GO:1990625":null}}


id: GO:1902301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galactaric acid anion (galactarate) from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transporter activity","termid":"GO:0042876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"galactarate transmembrane transporter activity","secondary_identifiers":["GO:0042877"],"synonyms":[{"name":"D-galactarate transmembrane transporter activity","type":"related"},{"name":"galactaric acid anion transmembrane transporter activity","type":"exact"}],"termid":"GO:1902301"}


id: GO:0071295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin","termid":"GO:0071295"}


id: PBO:0029086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029086"}


id: PR:Q09865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00126","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.08","secondary_identifiers":["UniProtKB:Q09865"],"synonyms":[{"name":"Spom972h-rplF","type":"exact"}],"termid":"PR:Q09865"}


id: MONDO:0010363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the ZDHHC15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 91","secondary_identifiers":["UMLS:C1845142","MESH:C564482","MEDGEN:375592","OMIM:300577","DOID:0112043"],"synonyms":[{"name":"MRX91","type":"related"},{"name":"ZDHHC15 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked 91","type":"exact"},{"name":"intellectual disability, X-linked type 91","type":"exact"},{"name":"mental retardation, X-linked 91","type":"related"},{"name":"mental retardation, X-linked 91, X-linked dominant","type":"exact"},{"name":"mental retardation, X-linked type 91","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in ZDHHC15","type":"exact"}],"termid":"MONDO:0010363","xrefs":{"Monarch":{"xref_id":"0010363"}}}


id: MONDO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired hemophilia","termid":"MONDO:0019139"},{"relation_name":"is_a","term_name":"factor XI deficiency","termid":"MONDO:0020587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired factor XI deficiency","secondary_identifiers":["MEDGEN:1376431","UMLS:C4329257","GARD:22411","NCIT:C131627","Orphanet:599507"],"synonyms":[{"name":"aFXI","type":"exact"}],"termid":"MONDO:0035740","xrefs":{"Monarch":{"xref_id":"0035740"}}}


id: SO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript_region","synonyms":[{"name":"primary transcript region","type":"exact"}],"termid":"SO:0000835"}


id: GO:0060582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in commitment of a cell to a fate in a developmental field. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination involved in pattern specification","termid":"GO:0060582"}


id: PBO:0046989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 87 member A","termid":"PBO:0046989"}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: PBO:0081193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 5","termid":"PBO:0081193"}


id: MONDO:0006137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process in the cervix characterized by morphologic features of both moderate and severe intraepithelial neoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"cervical intraepithelial neoplasia","termid":"MONDO:0022394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical intraepithelial neoplasia grade 2/3","secondary_identifiers":["UMLS:C2986622","NCIT:C94676","EFO:1000166","MEDGEN:458848"],"synonyms":[{"name":"CIN 2/3","type":"exact"}],"termid":"MONDO:0006137","xrefs":{"Monarch":{"xref_id":"0006137"}}}


id: MONDO:0100291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"T acute lymphoblastic leukemia in which the blasts have unique immunophenotypic and genetic characteristics suggesting only limited early T-cell differentiation.","definition_xrefs":["NCIT:C130043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell acute lymphoblastic leukemia","termid":"MONDO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"early T cell progenitor acute lymphoblastic leukemia","secondary_identifiers":["UMLS:C4329780","MEDGEN:1385175"],"synonyms":[{"name":"ETP ALL","type":"exact"},{"name":"ETP-ALL","type":"exact"},{"name":"early T acute lymphoblastic leukaemia","type":"exact"},{"name":"early T acute lymphoblastic leukemia","type":"exact"},{"name":"early T-cell precursor acute lymphoblastic leukaemia","type":"exact"},{"name":"early T-cell precursor acute lymphoblastic leukemia","type":"exact"},{"name":"early T-cell precursor lymphoblastic leukaemia","type":"exact"},{"name":"early T-cell precursor lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0100291","xrefs":{"Monarch":{"xref_id":"0100291"}}}


id: GO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex which transfers a palmitoyl group onto serine, forming 3-dehydro-D-sphinganine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"homodimeric serine palmitoyltransferase complex","termid":"GO:0002179"}


id: PR:P10989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- act1 gene.","definition_xrefs":["UniProtKB:P10989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.12c","synonyms":[{"name":"Spom972h-act1","type":"exact"}],"termid":"PR:P10989"}


id: GO:0044315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells, via the type VII protein secretion system.","definition_xrefs":["PMID:17922044","PMID:19876390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"protein secretion by the type VII secretion system","termid":"GO:0044315"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: PBO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 2","termid":"PBO:0043723"}


id: MONDO:0019207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DEND syndrome is a very rare, generally severe form of neonatal diabetes mellitus (NDM) characterized by a triad of developmental delay, epilepsy, and neonatal diabetes.","definition_xrefs":["Orphanet:79134"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0019254","MONDO:0005015","MONDO:0037792"],"is_obsolete":false,"name":"DEND syndrome","secondary_identifiers":["GARD:16701","MEDGEN:929262","SCTID:721088003","NCIT:C131845","UMLS:C4303593"],"synonyms":[{"name":"K ATP associated developmental delay, epilepsy and neonatal diabetes","type":"exact"},{"name":"developmental delay-epilepsy-neonatal diabetes syndrome","type":"exact"}],"termid":"MONDO:0019207","xrefs":{"Monarch":{"xref_id":"0019207"}}}


id: GO:1905106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Dizocilpine stimulus.","definition_xrefs":["PMID:20064280","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to Dizocilpine (obsolete GO:1905106)","termid":"GO:1905106"}


id: MONDO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer of the upper, convex surface of the bladder.","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder dome cancer","secondary_identifiers":["ICD9:188.1","UMLS:C0496827","MEDGEN:141677","SCTID:188240003","DOID:11820"],"synonyms":[{"name":"cancer of fundus of urinary bladder","type":"exact"},{"name":"fundus of urinary bladder cancer","type":"exact"},{"name":"malignant fundus of urinary bladder neoplasm","type":"exact"},{"name":"malignant neoplasm of apex of urinary bladder","type":"exact"},{"name":"malignant neoplasm of dome of urinary bladder","type":"exact"},{"name":"malignant neoplasm of fundus of urinary bladder","type":"exact"},{"name":"malignant tumor of vault of bladder","type":"exact"},{"name":"malignant tumour of vault of bladder","type":"exact"},{"name":"superior surface of bladder","type":"exact"}],"termid":"MONDO:0001380","xrefs":{"Monarch":{"xref_id":"0001380"}}}


id: PATO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000361 gel consistency value (obsolete PATO:0000361)","termid":"PATO:0000361"}


id: GO:1903028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of opsonization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rl","PMID:22333221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of opsonization","termid":"GO:1903027"},{"relation_name":"positively_regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of opsonization","synonyms":[{"name":"activation of opsonization","type":"narrow"},{"name":"up regulation of opsonization","type":"exact"},{"name":"up-regulation of opsonization","type":"exact"},{"name":"upregulation of opsonization","type":"exact"}],"termid":"GO:1903028"}


id: PBO:0087090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L7A; required for processing of 27SA3 pre-rRNA to 27SB pre-rRNA during assembly of large ribosomal subunit; depletion leads to a turnover of pre-rRNA; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2); binds to Domain II of 25S and 5.8S rRNAs; homologous to mammalian ribosomal protein L7 and bacterial L30; RPL7A has a paralog, RPL7B, that arose from the whole genome duplication","termid":"PBO:0087090"}


id: SO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-D-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDJ_gene_segment","synonyms":[{"name":"V-D-J-GENE","type":"exact"},{"name":"VDJ gene","type":"exact"}],"termid":"SO:0000574"}


id: PBO:0046691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETHE1 persulfide dioxygenase","termid":"PBO:0046691"}


id: PBO:0040506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advillin","termid":"PBO:0040506"}


id: FYPO:0006298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of the 5.8S ribosomal RNA molecule is abnormal.","definition_xrefs":["GO:0000467","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"},{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 5.8S rRNA 3'-end processing","synonyms":[{"name":"abnormal 5.8S rRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal 5.8S rRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"abnormal exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"FYPO:0006298"}


id: GO:0043570
data:
  {"annotated_genes":["SJAG_03997","SJAG_01832","SJAG_04855","SJAG_01419","SJAG_03898","SJAG_05180","SJAG_02226","SJAG_01050","SJAG_02187","SJAG_04816","SJAG_00247","SJAG_04671","SJAG_02748","SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93654,102521,108040,109723,118459],"is_not":false,"summary":null,"term":"GO:0043570"},{"annotations":[97924,101209,72068,103113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043007"},{"annotations":[106380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[105175],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[104223,117045,101290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA repeat elements.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_01419":null,"SJAG_01832":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of DNA repeat elements","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043570","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:0043570":null,"GO:0045458":null,"GO:1902681":null}}


id: PBO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted), possible alternative UTR","termid":"PBO:0000149"}


id: PR:000027587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:11242054","PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027587"}


id: GO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"},{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of alkaline phosphatase activity","termid":"GO:0010694"}


id: GO:0050812
data:
  {"annotated_genes":["SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01402":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of acyl-CoA anabolism","type":"exact"},{"name":"regulation of acyl-CoA biosynthesis","type":"exact"},{"name":"regulation of acyl-CoA formation","type":"exact"},{"name":"regulation of acyl-CoA synthesis","type":"exact"}],"termid":"GO:0050812","terms_by_termid":{"GO:0010510":null}}


id: GO:0007269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter secretion","secondary_identifiers":["Reactome:R-HSA-112310","GO:0010554"],"synonyms":[{"name":"neurotransmitter release","type":"exact"},{"name":"neurotransmitter secretory pathway","type":"exact"}],"termid":"GO:0007269"}


id: PBO:0017465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-go_annotation_extension_relation","termid":"PBO:0017465"}


id: PBO:0088959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp3","termid":"PBO:0088959"}


id: PBO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_meiosis","termid":"PBO:0036157"}


id: PBO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 4","termid":"PBO:0003013"}


id: GO:0150151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["GOC:aruk","PMID:27901018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-17A production","synonyms":[{"name":"regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150151"}


id: PBO:0080212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VHL like","termid":"PBO:0080212"}


id: PBO:0056761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15","termid":"PBO:0056761"}


id: GO:0061831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature spermatids and Sertoli cells at the luminal end of the Sertoli cell.","definition_xrefs":["PMID:22332112","GOC:aruk","GOC:bc","GOC:dph","PMID:23546604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical ectoplasmic specialization","synonyms":[{"name":"apical ES","type":"exact"}],"termid":"GO:0061831"}


id: PBO:0049781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 15","termid":"PBO:0049781"}


id: GO:0033467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving CMP-keto-3-deoxy-D-manno-octulosonic acid, a substance composed of the acidic sugar 3-deoxy-D-manno-octulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process","synonyms":[{"name":"CMP-KDO metabolic process","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid metabolism","type":"exact"},{"name":"CMP-ketodeoxyoctanoate metabolic process","type":"related"}],"termid":"GO:0033467"}


id: GO:0051098
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97205,107116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051098","terms_by_termid":{"GO:1904530":null}}


id: PBO:0074163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F6","termid":"PBO:0074163"}


id: PBO:0072944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 23","termid":"PBO:0072944"}


id: GO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos","Wikipedia:Cholinergic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, cholinergic","synonyms":[{"name":"cholinergic synaptic transmission","type":"exact"}],"termid":"GO:0007271"}


id: PBO:0091358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, quiescence specific","termid":"PBO:0091358"}


id: PBO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 12, pseudogene","termid":"PBO:0044126"}


id: PR:O14320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.03c","synonyms":[{"name":"Spom972h-coa1","type":"exact"}],"termid":"PR:O14320"}


id: GO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular complex that binds lipoprotein receptors VLDLR and APOER2, cadherin-related neuronal receptors (CNRs) or alpha3beta1 integrin and induces various downstream, reelin-dependent, phosphorylation cascades. It ultimately affects polarization, differentiation, neuronal migration and layer formation in the embryonic brain and neuron growth, maturation, and synaptic activity in the postnatal and adult brain.","definition_xrefs":["PMID:21844191","PMID:28887403","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"reelin complex","termid":"GO:0110157"}


id: _global:integral_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X integral_part_of Y if and only if: X part_of Y and Y has_part X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral_part_of","termid":"_global:integral_part_of"}


id: PBO:0089337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER retrograde transport protein","termid":"PBO:0089337"}


id: GO:1900525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","PMID:8614637","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900525)","synonyms":[{"name":"activation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900525"}


id: MOD:00875
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a tetraglutamic acid.","definition_xrefs":["Unimod:453","RESID:AA0202#var","PubMed:1680872","PubMed:10747868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl tetraglutamic acid","synonyms":[{"name":"GluGluGluGlu","type":"related"},{"name":"tetraglutamyl","type":"related"}],"termid":"MOD:00875"}


id: PBO:0045180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 peudogene 2","termid":"PBO:0045180"}


id: GO:1990715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an mRNA molecule coding sequence (CDS).","definition_xrefs":["GOC:kmv","SO:0000316","PMID:25805859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mRNA CDS binding","synonyms":[{"name":"mRNA coding region binding","type":"exact"},{"name":"mRNA coding sequence binding","type":"exact"}],"termid":"GO:1990715"}


id: GO:0044654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: starch + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete starch alpha-glucosidase activity (obsolete GO:0044654)","termid":"GO:0044654"}


id: FYPO:0000232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring splits upon initiation of contraction during anaphase B, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict.","definition_xrefs":["PMID:18272786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring morphology","termid":"FYPO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0004803","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"split actomyosin contractile ring","synonyms":[{"name":"abnormal contractile ring contraction with contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting upon contraction","type":"related"},{"name":"cytokinesis defects, splitting of the actinomyosin ring","type":"related"},{"name":"split actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"split actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"split cytokinetic contractile ring","type":"exact"},{"name":"split mitotic contractile ring","type":"exact"}],"termid":"FYPO:0000232"}


id: MONDO:0043135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcephaly microphthalmos blindness","secondary_identifiers":["UMLS:C2931526","MESH:C537541","MEDGEN:419434"],"termid":"MONDO:0043135","xrefs":{"Monarch":{"xref_id":"0043135"}}}


id: PBO:0072711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4","termid":"PBO:0072711"}


id: MONDO:0800279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 6","secondary_identifiers":["MEDGEN:394369","UMLS:C2677793"],"synonyms":[{"name":"EIG6","type":"exact"}],"termid":"MONDO:0800279","xrefs":{"Monarch":{"xref_id":"0800279"}}}


id: MONDO:0006740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Empty sella syndrome (ESS) is a condition that involves the sella turcica, a bony structure at the base of the brain that protects the pituitary gland. There is a primary and secondary form of the condition. The primary form occurs when a structural defect above the pituitary gland increases pressure in the sella turcica and causes the gland to flatten. The secondary form occurs when the pituitary gland is damaged due to injury, a tumor, surgery or radiation therapy. Some people with ESS have no symptoms. People with secondary ESS may have symptoms of decreased pituitary function such as absence of menstruation, infertility, fatigue, and intolerance to stress and infection. In children, ESS may be associated with early onset of puberty, growth hormone deficiency, pituitary tumors, or pituitary gland dysfunction. Treatment focuses on the symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empty sella syndrome","secondary_identifiers":["EFO:1000914","SCTID:237722004","DOID:3642","icd11.foundation:49112094","MESH:D004652","MedDRA:10014567","NCIT:C84686","ICD9:253.8","MEDGEN:41766","UMLS:C0014008"],"synonyms":[{"name":"empty sella","type":"exact"},{"name":"empty sella syndrome","type":"exact"},{"name":"empty sella turcica","type":"related"}],"termid":"MONDO:0006740","xrefs":{"Monarch":{"xref_id":"0006740"}}}


id: GO:0000220
data:
  {"annotated_genes":["SJAG_03962","SJAG_02023","SJAG_03406","SJAG_02782","SJAG_05294","SJAG_00516","SJAG_01913"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62670,92039,93945,97561,97742,101877,105857],"is_not":false,"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V0 domain","termid":"GO:0033179"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V0 domain","type":"exact"}],"termid":"GO:0000220","terms_by_termid":{"GO:0000220":null}}


id: PBO:0050725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 11","termid":"PBO:0050725"}


id: PBO:0046304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENAH actin regulator","termid":"PBO:0046304"}


id: MONDO:0017150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with another disease is a group of conditions that lead to PAH; connective tissue diseases (lupus erythematosus, systemic sclerosis and mixed connective tissues disease), congenital heart disease (Eisenmenger syndrome), HIV infection, portal hypertension, schistosomiasis and chronic hemolytic anemia, which is characterized by elevated pulmonary arterial resistance leading to right heart failure that is progressive and potentially fatal.","definition_xrefs":["Orphanet:275791"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with another disease (obsolete MONDO:0017150)","secondary_identifiers":["NANDO:2201048"],"synonyms":[{"name":"PAH associated with another disease","type":"exact"},{"name":"secondary PAH","type":"exact"}],"termid":"MONDO:0017150","xrefs":{"Monarch":{"xref_id":"0017150"}}}


id: GO:0089702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl phosphate + UDP-alpha-D-glucose = alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphate + UMP.","definition_xrefs":["RHEA:28126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"undecaprenyl-phosphate glucose phosphotransferase activity","secondary_identifiers":["EC:2.7.8.31"],"termid":"GO:0089702"}


id: GO:1903025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase II regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:krc","GOC:dph","GO_REF:0000059","GOC:TermGenie","PMID:20026326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA polymerase II regulatory region sequence-specific DNA binding","termid":"GO:1903025"}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["PomBase:mah","GO:0007005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: PBO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 1","termid":"PBO:0051929"}


id: MONDO:0008076
data:
  {"annotated_genes":["SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87999],"is_not":false,"summary":null,"term":"MONDO:0008076"}]},"cv_name":"mondo","definition":"An autosomal dominant form of recurrent focal neuropathy characterized clinically by acute, recurrent episodes of brachial plexus neuropathy with muscle weakness and atrophy preceded by severe pain in the affected arm.","definition_xrefs":["OMIM:162100"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuralgic amyotrophy","termid":"MONDO:0017362"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"amyotrophic neuralgia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D020968","SCTID:26609002","UMLS:C1834304","ICD9:353.5","DOID:10383","MEDGEN:320318","GARD:3955"],"synonyms":[{"name":"HNA","type":"related"},{"name":"amyotrophy, hereditary neuralgic","type":"exact"},{"name":"amyotrophy, hereditary neuralgic, with predilection for brachial plexus","type":"exact"},{"name":"brachial plexus neuropathy, hereditary","type":"exact"},{"name":"hereditary brachial plexus neuropathy","type":"exact"},{"name":"hereditary neuralgic amyotrophy","type":"exact"},{"name":"neuralgic amyotrophy","type":"related"},{"name":"neuritis with brachial predilection","type":"exact"}],"termid":"MONDO:0008076","terms_by_termid":{"MONDO:0008076":null},"xrefs":{"Monarch":{"xref_id":"0008076"}}}


id: PBO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 2","termid":"PBO:0045869"}


id: PBO:0082167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adhesion subunit of a-agglutinin of a-cells; C-terminal sequence acts as a ligand for alpha-agglutinin (Sag1p) during agglutination, modified with O-linked oligomannosyl chains, linked to anchorage subunit Aga1p via two disulfide bonds","termid":"PBO:0082167"}


id: PBO:0051498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 22","termid":"PBO:0051498"}


id: GO:0097343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ripoptosome, a protein complex whose formation can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22274400","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"ripoptosome assembly","termid":"GO:0097343"}


id: PBO:0004594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase (predicted)","termid":"PBO:0004594"}


id: PBO:0055080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2498","termid":"PBO:0055080"}


id: GO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA 4,6-diamino-5-formamidopyrimidine = DNA adenine + H2O.","definition_xrefs":["EC:4.3.2.4","MetaCyc:PURINE-IMIDAZOLE-RING-CYCLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"purine imidazole-ring cyclase activity","synonyms":[{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing; DNA-adenine-forming)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine C8-N9-lyase (cyclizing; DNA-adenine-forming)","type":"related"}],"termid":"GO:0050230"}


id: PBO:0049195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRID1 antisense RNA 1","termid":"PBO:0049195"}


id: PBO:0080855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 4","termid":"PBO:0080855"}


id: MONDO:0013227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital plasminogen activator inhibitor type 1 (PAI-1) deficiency is a rare genetic bleeding disorder characterized by premature lysis of hemostatic clots and a moderate bleeding tendency.","definition_xrefs":["Orphanet:465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital plasminogen activator inhibitor type 1 deficiency","secondary_identifiers":["MEDGEN:412870","icd11.foundation:428643962","GARD:4381","NCIT:C133884","NANDO:2200688","OMIM:613329","MESH:C567640","UMLS:C2750067","SCTID:717407006"],"synonyms":[{"name":"congenital PAI-1 deficiency","type":"exact"},{"name":"congenital plasminogen activator inhibitor type 1 deficiency","type":"exact"},{"name":"hyperfibrinolysis due to Pai1 deficiency","type":"related"},{"name":"plasminogen activator INHIBITOR-1 deficiency","type":"related"},{"name":"plasminogen activator inhibitor type 1 deficiency","type":"related"}],"termid":"MONDO:0013227","xrefs":{"Monarch":{"xref_id":"0013227"}}}


id: FYPO:0004853
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of an RNA in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"RNA localization phenotype","synonyms":[{"name":"RNA localisation phenotype","type":"exact"},{"name":"fission yeast RNA localization phenotype","type":"exact"}],"termid":"FYPO:0004853"}


id: PBO:0000046
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase","termid":"PBO:0000046"}


id: PATO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy","termid":"PATO:0000454"}


id: PBO:0116627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4","termid":"PBO:0116627"}


id: PBO:0068686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 67, pseudogene","termid":"PBO:0068686"}


id: GO:0000449
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"}


id: MONDO:0005365
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  {"annotated_genes":["SJAG_01941","SJAG_02155","SJAG_03811","SJAG_05175","SJAG_02431","SJAG_02016","SJAG_00082","SJAG_03088","SJAG_04856","SJAG_04295","SJAG_00365","SJAG_02348","SJAG_00488","SJAG_00301","SJAG_04703","SJAG_03703","SJAG_05182","SJAG_04115","SJAG_00164","SJAG_04409","SJAG_01943","SJAG_00279","SJAG_03145","SJAG_04719","SJAG_02463","SJAG_03536","SJAG_01400","SJAG_01722","SJAG_05213","SJAG_04554","SJAG_04882","SJAG_03785","SJAG_03943","SJAG_01344","SJAG_01253","SJAG_04706","SJAG_04619","SJAG_03007","SJAG_00244","SJAG_04558","SJAG_02139","SJAG_01926","SJAG_01538","SJAG_00358","SJAG_05282","SJAG_04613","SJAG_05330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012196"},{"annotations":[87173,87174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007424"},{"annotations":[87386,87385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011350"},{"annotations":[87690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011480"},{"annotations":[87339,87337,87338,87341,87340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011568"},{"annotations":[87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014603"},{"annotations":[88593,88594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010915"},{"annotations":[87096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014594"},{"annotations":[87468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014853"},{"annotations":[89191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011067"},{"annotations":[88462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012091"},{"annotations":[87156,87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010933"},{"annotations":[88605,88606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013471"},{"annotations":[88888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013386"},{"annotations":[87643,87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014237"},{"annotations":[88571,88572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013489"},{"annotations":[89129,86847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010799"},{"annotations":[88621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027048"},{"annotations":[87189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033258"},{"annotations":[88546,88547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032911"},{"annotations":[88555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032917"},{"annotations":[87186,87184,87185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030058"},{"annotations":[87607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033668"},{"annotations":[88944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030719"},{"annotations":[88425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859524"},{"annotations":[88422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859525"},{"annotations":[88979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032740"},{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033199"},{"annotations":[88094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032639"},{"annotations":[89009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032761"},{"annotations":[89012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032762"},{"annotations":[88984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958277"},{"annotations":[88989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032749"},{"annotations":[87218,87219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010577"},{"annotations":[87670,87671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009479"},{"annotations":[89044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"A partial or complete loss of hearing in one or both ears. It is classified as conductive, sensory, or central.","definition_xrefs":["NCIT:C35731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing disorder","termid":"MONDO:0021945"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00164":null,"SJAG_00244":null,"SJAG_00279":null,"SJAG_00301":null,"SJAG_00358":null,"SJAG_00365":null,"SJAG_00488":null,"SJAG_01253":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01538":null,"SJAG_01722":null,"SJAG_01926":null,"SJAG_01941":null,"SJAG_01943":null,"SJAG_02016":null,"SJAG_02139":null,"SJAG_02155":null,"SJAG_02348":null,"SJAG_02431":null,"SJAG_02463":null,"SJAG_03007":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03536":null,"SJAG_03703":null,"SJAG_03785":null,"SJAG_03811":null,"SJAG_03943":null,"SJAG_04115":null,"SJAG_04295":null,"SJAG_04409":null,"SJAG_04554":null,"SJAG_04558":null,"SJAG_04613":null,"SJAG_04619":null,"SJAG_04703":null,"SJAG_04706":null,"SJAG_04719":null,"SJAG_04856":null,"SJAG_04882":null,"SJAG_05175":null,"SJAG_05182":null,"SJAG_05213":null,"SJAG_05282":null,"SJAG_05330":null},"genotype_count":0,"is_obsolete":false,"name":"hearing loss disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0004238","UMLS:C1384666","ICD10CM:H90","ICD9:389","ICD9:389.9","MEDGEN:235586","ICD9:389.8","MESH:D034381","SCTID:15188001"],"synonyms":[{"name":"deafness","type":"narrow"},{"name":"hearing impairment","type":"related"},{"name":"hearing loss","type":"exact"},{"name":"hypoacuses","type":"exact"},{"name":"hypoacusis","type":"exact"},{"name":"loss of hearing","type":"exact"},{"name":"loss, hearing","type":"exact"}],"termid":"MONDO:0005365","terms_by_termid":{"MONDO:0007424":null,"MONDO:0009479":null,"MONDO:0010378":null,"MONDO:0010577":null,"MONDO:0010799":null,"MONDO:0010915":null,"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0011350":null,"MONDO:0011480":null,"MONDO:0011568":null,"MONDO:0012091":null,"MONDO:0012196":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0014594":null,"MONDO:0014603":null,"MONDO:0014853":null,"MONDO:0027048":null,"MONDO:0030058":null,"MONDO:0030719":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0032911":null,"MONDO:0032917":null,"MONDO:0033199":null,"MONDO:0033258":null,"MONDO:0033668":null,"MONDO:0859524":null,"MONDO:0859525":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0005365"}}}


id: PBO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 7-27","termid":"PBO:0051079"}


id: MONDO:0006796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from hypertension.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"intracranial hypertension","termid":"MONDO:0006810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertensive encephalopathy","secondary_identifiers":["ICD9:437.2","EFO:1000976","DOID:9427","ICD10CM:I67.4","icd11.foundation:1934215896","MESH:D020343","NCIT:C3503","SCTID:50490005","UMLS:C0151620","MEDGEN:57726","MedDRA:10020803"],"termid":"MONDO:0006796","xrefs":{"Monarch":{"xref_id":"0006796"}}}


id: GO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell chemotaxis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell migration","termid":"GO:0014912"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell chemotaxis","termid":"GO:0071671"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell chemotaxis","synonyms":[{"name":"down regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"down-regulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"downregulation of smooth muscle cell chemotaxis","type":"exact"},{"name":"inhibition of smooth muscle cell chemotaxis","type":"narrow"}],"termid":"GO:0071672"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: PBO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 3","termid":"PBO:0060828"}


id: MONDO:0008955
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88711],"is_not":false,"summary":null,"term":"MONDO:0008955"}]},"cv_name":"mondo","definition":"Any COFS syndrome in which the cause of the disease is a mutation in the ERCC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COFS syndrome","termid":"MONDO:0008926"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0006025","MONDO:0021190"],"is_obsolete":false,"name":"cerebrooculofacioskeletal syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0220722","NCIT:C173085","DOID:0080911","MEDGEN:66320","GARD:15150","OMIM:214150"],"synonyms":[{"name":"COFS syndrome","type":"broad"},{"name":"COFS syndrome caused by mutation in ERCC6","type":"exact"},{"name":"COFS1","type":"exact"},{"name":"ERCC6 COFS syndrome","type":"exact"},{"name":"Pena-Shokeir syndrome, type 2","type":"related"},{"name":"cerebrooculofacioskeletal syndrome 1","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome type 1","type":"exact"}],"termid":"MONDO:0008955","terms_by_termid":{"MONDO:0008955":null},"xrefs":{"Monarch":{"xref_id":"0008955"}}}


id: GO:0035770
data:
  {"annotated_genes":["SJAG_02164","SJAG_02628","SJAG_03424","SJAG_03460","SJAG_02573","SJAG_02663","SJAG_04880","SJAG_03901","SJAG_03498","SJAG_03070","SJAG_03762","SJAG_01548","SJAG_02592","SJAG_04342","SJAG_04672","SJAG_03696","SJAG_04407","SJAG_03132","SJAG_01159","SJAG_04427","SJAG_01317","SJAG_00759","SJAG_02213","SJAG_01897","SJAG_04480","SJAG_16457","SJAG_05694","SJAG_02808","SJAG_01436","SJAG_03283","SJAG_02419","SJAG_16454","SJAG_00285","SJAG_01822","SJAG_01910","SJAG_02239","SJAG_03157","SJAG_03597","SJAG_00507","SJAG_04640","SJAG_00474","SJAG_00966","SJAG_01761","SJAG_01479","SJAG_01954","SJAG_04350","SJAG_00686","SJAG_02540","SJAG_00391","SJAG_01650","SJAG_01053","SJAG_03214","SJAG_04744","SJAG_02638","SJAG_04772","SJAG_00423","SJAG_01512","SJAG_01222","SJAG_01026","SJAG_02263","SJAG_02995","SJAG_03023","SJAG_03876","SJAG_03276","SJAG_01625","SJAG_03277","SJAG_02469","SJAG_03954","SJAG_00544","SJAG_03113","SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117135,97946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015030"},{"annotations":[99029,94903,68400,107539,93439,78543,96458,74349,92145,74784,80570,91362,108911,57668,113071,96258,90225,115630,81148,111973,97997,92069,76398,91778,75901,60525,99708,100851,96692,107632,96459,115332,92187,107279,107633,89380,94442,72365,91031,101861,111871,94902,119312,91574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[114888,80584,79349,71708,81500,81537,77574,79491,81774,73467,77809,80580,111874,81434,71997,81408,118628,72864,74492,78542,117165,75445,92190,78392,71684,80679,77255,101863,76174,76010,76368,74908,79568,97502,91576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.","definition_xrefs":["GOC:sp","PMID:16520386","PMID:21436445","GOC:go_curators","PMID:20368989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01761":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03901":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"RNA granule","type":"narrow"},{"name":"RNP granule","type":"exact"},{"name":"mRNP granule","type":"exact"}],"termid":"GO:0035770","terms_by_termid":{"GO:0000932":null,"GO:0010494":null,"GO:0015030":null}}


id: PBO:0041450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 putative open reading frame 163","termid":"PBO:0041450"}


id: MONDO:0007765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis cranialis interna","secondary_identifiers":["UMLS:C1840404","HP:0005890","GARD:17753","MESH:C564168","Orphanet:443098","MEDGEN:327093","OMIM:144755"],"synonyms":[{"name":"HCIN","type":"related"},{"name":"hyperostosis cranalis interna","type":"exact"},{"name":"hyperostosis cranialis interna","type":"exact"},{"name":"hyperostosis cranialis interna (disease)","type":"exact"}],"termid":"MONDO:0007765","xrefs":{"Monarch":{"xref_id":"0007765"}}}


id: PBO:0078359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-2","termid":"PBO:0078359"}


id: GO:0000743
data:
  {"annotated_genes":["SJAG_00140","SJAG_01613","SJAG_00113","SJAG_02286","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78106,89627,93276,99504,101162],"is_not":false,"summary":null,"term":"GO:0000743"}]},"cv_name":"biological_process","definition":"The microtubule-based movement of nuclei towards one another as a prelude to karyogamy in organisms undergoing conjugation with cellular fusion.","definition_xrefs":["GOC:clt","GOC:vw","PMID:16380440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration along microtubule","termid":"GO:0030473"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0000747","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006946"],"synonyms":[{"name":"nuclear congression","type":"exact"},{"name":"nuclear migration during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000743","terms_by_termid":{"GO:0000743":null}}


id: PBO:0068830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 68, pseudogene","termid":"PBO:0068830"}


id: PBO:0055470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2903","termid":"PBO:0055470"}


id: PBO:0091935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere proximal small non-coding RNA","termid":"PBO:0091935"}


id: GO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"positively_regulates","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mononuclear cell migration","synonyms":[{"name":"activation of mononuclear cell migration","type":"narrow"},{"name":"stimulation of mononuclear cell migration","type":"narrow"},{"name":"up regulation of mononuclear cell migration","type":"exact"},{"name":"up-regulation of mononuclear cell migration","type":"exact"},{"name":"upregulation of mononuclear cell migration","type":"exact"}],"termid":"GO:0071677"}


id: PBO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A17","termid":"PBO:0047014"}


id: PBO:0059069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor sulfurase","termid":"PBO:0059069"}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: GO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microfibril, any small fibril occurring in biological material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"microfibril binding","termid":"GO:0050436"}


id: PBO:0059111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modulator of smoothened","termid":"PBO:0059111"}


id: FYPO:0006167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, has more than one nucleus, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated multinucleate vegetative cell","termid":"FYPO:0001495"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"},{"relation_name":"is_a","term_name":"branched, swollen, elongated, multinucleate vegetative cell","termid":"FYPO:0006165"},{"relation_name":"is_a","term_name":"viable branched, swollen vegetative cell","termid":"FYPO:0007282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0000005","FYPO:0000631","FYPO:0000032","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable branched, swollen, elongated, multinucleate vegetative cell","synonyms":[{"name":"viable branched, elongated, swollen, multinucleate vegetative cell","type":"exact"},{"name":"viable branched, swollen, elongated, multinucleate cell during vegetative growth","type":"exact"},{"name":"viable branched, swollen, elongated, multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006167"}


id: PBO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14A small subunit processome component","termid":"PBO:0080102"}


id: FYPO:0006322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is increased.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"increased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006322"}


id: PBO:0091821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane spermine family transmembrane transporter Caf5","termid":"PBO:0091821"}


id: MONDO:0009434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"MHC class I deficiency","termid":"MONDO:0011476"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypoproteinemia, hypercatabolic","secondary_identifiers":["DOID:0111981","MESH:C565476","GARD:15185","MEDGEN:343422","OMIM:241600","UMLS:C1855796"],"synonyms":[{"name":"B2M deficiency","type":"related"},{"name":"Beta-2-microglobulin deficiency","type":"related"},{"name":"IMD43","type":"related"},{"name":"hypoproteinemia, hypercatabolic","type":"exact"},{"name":"immunodeficiency 43","type":"related"}],"termid":"MONDO:0009434","xrefs":{"Monarch":{"xref_id":"0009434"}}}


id: GO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoacylglycerol metabolic process","synonyms":[{"name":"monoacylglycerol metabolism","type":"exact"},{"name":"monoglyceride metabolic process","type":"exact"},{"name":"monoglyceride metabolism","type":"exact"}],"termid":"GO:0046462"}


id: GO:0006535
data:
  {"annotated_genes":["SJAG_04305","SJAG_00582","SJAG_01880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60971,67692,77927],"is_not":false,"summary":null,"term":"GO:0006535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01880":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"cysteine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:CYSTSYN-PWY"],"synonyms":[{"name":"cysteine anabolism from serine","type":"exact"},{"name":"cysteine formation from serine","type":"exact"},{"name":"cysteine synthesis from serine","type":"exact"}],"termid":"GO:0006535","terms_by_termid":{"GO:0006535":null}}


id: MONDO:1011361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thymus gland disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymus gland disorder, non-human animal","termid":"MONDO:1011361","xrefs":{"Monarch":{"xref_id":"1011361"}}}


id: MONDO:0035534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive microcephalic primordial dwarfism characterized by congenital microcephaly and craniofacial features associated with a spectrum of limb abnormalities ranging from mild to severe. Short stature is frequently observed and often is severe.","definition_xrefs":["Orphanet:572761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON-related microcephaly-short stature-limb abnormalities spectrum","secondary_identifiers":["MEDGEN:1814482","GARD:22314","UMLS:C5681722"],"termid":"MONDO:0035534","xrefs":{"Monarch":{"xref_id":"0035534"}}}


id: GO:2000752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucosylceramide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"glucosylceramide catabolic process","termid":"GO:0006680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of glucosylceramide catabolic process","synonyms":[{"name":"regulation of glucosylceramide breakdown","type":"exact"},{"name":"regulation of glucosylceramide catabolism","type":"exact"},{"name":"regulation of glucosylceramide degradation","type":"exact"}],"termid":"GO:2000752"}


id: PR:O14145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tps2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tps2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.09c","synonyms":[{"name":"SPAC3G6.09c","type":"related"},{"name":"Spom972h-tps2","type":"exact"},{"name":"TPP tps2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose synthase complex catalytic subunit tps2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tps2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14145"}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: MONDO:0032616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 10","secondary_identifiers":["DOID:0112075","OMIM:618233","UMLS:C4748768","GARD:16320","MEDGEN:1648426"],"synonyms":[{"name":"MC1DN10","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 10","type":"related"}],"termid":"MONDO:0032616","xrefs":{"Monarch":{"xref_id":"0032616"}}}


id: GO:1900213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.","definition_xrefs":["GOC:mtg_apoptosis","PMID:17314325","GOC:mtg_kidney_jan10","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900211"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process","termid":"GO:2001055"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"activation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"},{"name":"positive regulation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"},{"name":"up regulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"up-regulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"upregulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"}],"termid":"GO:1900213"}


id: PBO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2B","termid":"PBO:0046724"}


id: PBO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Mod21","termid":"PBO:0000241"}


id: GO:1902876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mr","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of embryonic pattern specification","termid":"GO:1902875"},{"relation_name":"negatively_regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic pattern specification","synonyms":[{"name":"down regulation of embryonic pattern specification","type":"exact"},{"name":"down regulation of ventral/lateral system","type":"related"},{"name":"down-regulation of embryonic pattern specification","type":"exact"},{"name":"down-regulation of ventral/lateral system","type":"related"},{"name":"downregulation of embryonic pattern specification","type":"exact"},{"name":"downregulation of ventral/lateral system","type":"related"},{"name":"inhibition of embryonic pattern specification","type":"narrow"},{"name":"inhibition of ventral/lateral system","type":"related"},{"name":"negative regulation of ventral/lateral system","type":"related"}],"termid":"GO:1902876"}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: PBO:0005281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific DNA binding protein Spt2 (predicted)","termid":"PBO:0005281"}


id: GO:0010988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of low-density lipoprotein particle clearance. Low-density lipoprotein particle clearance is the process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"low-density lipoprotein particle clearance","termid":"GO:0034383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of low-density lipoprotein particle clearance","termid":"GO:0010988"}


id: PBO:0087892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription coactivator; component of the ADA and SAGA transcriptional adaptor/HAT (histone acetyltransferase) complexes","termid":"PBO:0087892"}


id: PBO:0071979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 8","termid":"PBO:0071979"}


id: GO:0051755
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95776,112174],"is_not":false,"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatid arms are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"part_of","term_name":"meiotic sister chromatid separation","termid":"GO:0051757"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051755","terms_by_termid":{"GO:0051755":null}}


