# terms

id: MONDO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome which occurs as a result of the occlusion of the basilar artery. It may be caused by atherosclerosis, embolism or hemorrhage. Clinical signs include dizziness, headache, vomiting, hemiparesis or hemiplegia, dysarthria, dysphagia, blurred vision and loss of consciousness. The clinical course is variable and is dependent upon the extent of the occlusion and the location of the clot along the basilar artery which determines the resultant neurologic impairment. Prognosis is dismal in cases where a complete occlusion occurs with rapid deterioration of neurological function.","definition_xrefs":["NCIT:C34413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basilar artery insufficiency","secondary_identifiers":["UMLS:C0004812","SCTID:64009001","MESH:D014715","MEDGEN:14039","ICD9:435.0","DOID:223"],"synonyms":[{"name":"basilar artery syndrome","type":"exact"}],"termid":"MONDO:0002250","xrefs":{"Monarch":{"xref_id":"0002250"}}}


id: PBO:0028779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028779"}


id: GO:2001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltopentaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"maltopentaose transport","termid":"GO:2001101"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: PBO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 2","termid":"PBO:0080179"}


id: PBO:0048566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamylamine cyclotransferase","termid":"PBO:0048566"}


id: GO:0015878
data:
  {"annotated_genes":["SJAG_02779","SJAG_02780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81015,73551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"}]},"cv_name":"biological_process","definition":"The directed movement of biotin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Biotin is cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"biotin transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"vitamin B7 transport","type":"exact"},{"name":"vitamin H transport","type":"exact"}],"termid":"GO:0015878","terms_by_termid":{"GO:1905135":null}}


id: PBO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of eIF2 kinase Gcn2p; competes with Gcn2p for binding to Gcn1p; may contribute to regulation of translation in response to starvation via regulation of Gcn2p; binds to monomeric actin and to ribosomes and polyribosomes; ortholog of mammalian IMPACT","termid":"PBO:0085004"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: PBO:0051098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin mu DNA binding protein 2","termid":"PBO:0051098"}


id: GO:0033951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 1,4-beta-D-xylose residues from the reducing end of oligosaccharides.","definition_xrefs":["EC:3.2.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide reducing-end xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.156-RXN"],"synonyms":[{"name":"Rex","type":"related"},{"name":"beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranose reducing-end xylanase activity","type":"related"},{"name":"reducing end xylose-releasing exo-oligoxylanase activity","type":"related"}],"termid":"GO:0033951"}


id: MOD:02071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-methionine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-methionine residue","termid":"MOD:02071"}


id: PATO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of being rigid and resistant to pressure and fibrous.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard","termid":"PATO:0000386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scirrhous","termid":"PATO:0002127"}


id: GO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) from other compounds, including ADP, adenosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dATP biosynthetic process","termid":"GO:0006175"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dATP biosynthetic process from ADP","synonyms":[{"name":"dATP anabolism from ADP","type":"exact"},{"name":"dATP formation from ADP","type":"exact"},{"name":"dATP synthesis from ADP","type":"exact"}],"termid":"GO:0006176"}


id: GO:0018315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a molybdenum-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation into molybdenum-molybdopterin complex","secondary_identifiers":["GO:0042041"],"synonyms":[{"name":"molybdenum incorporation into metallo-pterin complex","type":"exact"}],"termid":"GO:0018315"}


id: FYPO:0004800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:25891897","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abolished premeiotic DNA replication during azygotic meiotic cell cycle","synonyms":[{"name":"abolished DNA replication before azygotic meiotic cell cycle","type":"exact"},{"name":"abolished premeiotic DNA replication during azygotic meiosis","type":"related"},{"name":"abolished premeiotic DNA replication during azygotic meiosis and sporulation","type":"exact"},{"name":"absent premeiotic DNA replication during azygotic meiotic cell cycle","type":"exact"},{"name":"premeiotic DNA replication abolished during azygotic meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004800"}


id: GO:0042583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["GOC:jl","PMID:19158310","PMID:1961743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromaffin granule","termid":"GO:0042583"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: PBO:0047347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosin like 1","termid":"PBO:0047347"}


id: MONDO:0008586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oesophageal atresia (OA) encompasses a group of congenital anomalies with an interruption in the continuity of the esophagus, with or without persistent communication with the trachea.","definition_xrefs":["Orphanet:1199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal atresia/tracheoesophageal fistula","secondary_identifiers":["UMLS:C0040588","MEDGEN:21228","MESH:C531835","DOID:0080171","GARD:6381","MESH:D004933","OMIM:189960","MedDRA:10021530","MedDRA:10030146","SCTID:95435007","icd11.foundation:1582061097","NORD:1108"],"synonyms":[{"name":"Esophageal Atresia and/or Tracheoesophageal Fistula","type":"exact"},{"name":"TEF","type":"related"},{"name":"esophageal atresia and/or tracheoesophageal fistula","type":"exact"},{"name":"esophageal atresia with or without tracheoesophageal fistula","type":"related"},{"name":"te fistula","type":"related"},{"name":"tracheoesophageal fistula","type":"related"},{"name":"tracheoesophageal fistula with or without esohageal atresia","type":"exact"},{"name":"tracheoesophageal fistula with or without esophageal atresia","type":"related"}],"termid":"MONDO:0008586","xrefs":{"Monarch":{"xref_id":"0008586"}}}


id: PBO:0028163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP_binding","termid":"PBO:0028163"}


id: MONDO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lagophthalmos","termid":"MONDO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mechanical lagophthalmos","secondary_identifiers":["MEDGEN:509845","ICD10CM:H02.22","ICD9:374.22","icd11.foundation:466575235","SCTID:21783006","DOID:13037","UMLS:C0155198"],"termid":"MONDO:0001622","xrefs":{"Monarch":{"xref_id":"0001622"}}}


id: GO:0034832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-geranial + H2O + NAD+ = geranate + 2 H+ + NADH.","definition_xrefs":["RHEA:34351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geranial dehydrogenase activity","secondary_identifiers":["EC:1.2.1.86","MetaCyc:RXN-11970"],"termid":"GO:0034832"}


id: GO:0004829
data:
  {"annotated_genes":["SJAG_01235","SJAG_03585"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72470,75485],"is_not":false,"summary":null,"term":"GO:0004829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr).","definition_xrefs":["EC:6.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01235":null,"SJAG_03585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"threonine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380201","MetaCyc:THREONINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380002","RHEA:24624"],"synonyms":[{"name":"L-threonine:tRNAThr ligase (AMP-forming)","type":"related"},{"name":"TRS","type":"related"},{"name":"threonine translase activity","type":"related"},{"name":"threonine-transfer ribonucleate synthetase activity","type":"related"},{"name":"threonyl ribonucleic synthetase activity","type":"related"},{"name":"threonyl-tRNA synthetase activity","type":"exact"},{"name":"threonyl-transfer RNA synthetase activity","type":"related"},{"name":"threonyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"threonyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004829","terms_by_termid":{"GO:0004829":null}}


id: GO:0034317
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115100],"is_not":false,"summary":null,"term":"GO:0034317"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + beta-D-ribosylnicotinate = ADP + H+ + nicotinate beta-D-ribonucleotide.","definition_xrefs":["RHEA:25568","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"nicotinate riboside kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-8443","EC:2.7.1.173"],"synonyms":[{"name":"nicotinic acid riboside kinase","type":"exact"},{"name":"ribosylnicotinic acid kinase","type":"exact"}],"termid":"GO:0034317","terms_by_termid":{"GO:0034317":null}}


id: MONDO:0054785
data:
  {"annotated_genes":["SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87834],"is_not":false,"summary":null,"term":"MONDO:0054785"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18004","MEDGEN:1643082","DOID:0070332","OMIM:617954","Orphanet:569290","UMLS:C4693741"],"synonyms":[{"name":"MMDS6","type":"exact"},{"name":"PMPCB deficiency","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 6","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 6","type":"exact"}],"termid":"MONDO:0054785","terms_by_termid":{"MONDO:0054785":null},"xrefs":{"Monarch":{"xref_id":"0054785"}}}


id: PBO:0018031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad2","termid":"PBO:0018031"}


id: MONDO:0008780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the ALS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"},{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 2, juvenile","secondary_identifiers":["MEDGEN:349246","DOID:0060194","MESH:C565957","GARD:15137","OMIM:205100","UMLS:C1859807"],"synonyms":[{"name":"ALS, juvenile","type":"related"},{"name":"ALS2","type":"exact"},{"name":"ALS2 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 2","type":"exact"},{"name":"amyotrophic lateral sclerosis 2, juvenile","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in ALS2","type":"exact"}],"termid":"MONDO:0008780","xrefs":{"Monarch":{"xref_id":"0008780"}}}


id: MONDO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the cervix. Representative examples include squamous papilloma, endocervical polyp, and rhabdomyoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine benign neoplasm","termid":"MONDO:0000632"},{"relation_name":"is_a","term_name":"uterine cervix neoplasm","termid":"MONDO:0021230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical benign neoplasm","secondary_identifiers":["DOID:0060110","MEDGEN:102300","NCIT:C3607","SCTID:92056006","UMLS:C0153997"],"synonyms":[{"name":"benign cervical neoplasm","type":"exact"},{"name":"benign cervix uteri neoplasm","type":"exact"},{"name":"benign cervix uteri tumor","type":"exact"},{"name":"benign cervix uteri tumour","type":"exact"},{"name":"benign neoplasm of cervix uteri","type":"exact"},{"name":"benign neoplasm of the cervix uteri","type":"exact"},{"name":"benign neoplasm of the uterine cervix","type":"exact"},{"name":"benign neoplasm of uterine cervix","type":"exact"},{"name":"benign tumor of cervix uteri","type":"exact"},{"name":"benign tumor of the cervix uteri","type":"exact"},{"name":"benign tumor of the uterine cervix","type":"exact"},{"name":"benign tumor of uterine cervix","type":"exact"},{"name":"benign tumour of cervix uteri","type":"exact"},{"name":"benign tumour of the cervix uteri","type":"exact"},{"name":"benign tumour of the uterine cervix","type":"exact"},{"name":"benign tumour of uterine cervix","type":"exact"},{"name":"benign uterine cervix neoplasm","type":"exact"},{"name":"benign uterine cervix tumor","type":"exact"},{"name":"benign uterine cervix tumour","type":"exact"},{"name":"uterine cervix benign neoplasm","type":"exact"}],"termid":"MONDO:0000644","xrefs":{"Monarch":{"xref_id":"0000644"}}}


id: PBO:0120001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 15, pseudogene","termid":"PBO:0120001"}


id: PBO:0076604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 23","termid":"PBO:0076604"}


id: MONDO:0859150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi-like syndrome","termid":"MONDO:0018354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"BDV syndrome","secondary_identifiers":["Orphanet:633028","MEDGEN:1785671","OMIM:619326","UMLS:C5543403"],"synonyms":[{"name":"CPE-related Prader-Willi-like syndrome","type":"exact"}],"termid":"MONDO:0859150","xrefs":{"Monarch":{"xref_id":"0859150"}}}


id: MONDO:0021957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset nuclear cataract","termid":"MONDO:0020376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic congenital nuclear cataract","secondary_identifiers":["UMLS:C2931470","MEDGEN:419085","MESH:C537298"],"synonyms":[{"name":"congenital nuclear cataract, autosomal recessive","type":"related"}],"termid":"MONDO:0021957","xrefs":{"Monarch":{"xref_id":"0021957"}}}


id: MONDO:1011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis with gingival hamartomas that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis with gingival hamartomas, non-human animal","termid":"MONDO:1010312"},{"relation_name":"is_a","term_name":"osteopetrosis, cattle","termid":"MONDO:1011181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis with gingival hamartomas, cattle","secondary_identifiers":["OMIA:001887-9913"],"termid":"MONDO:1011203","xrefs":{"Monarch":{"xref_id":"1011203"}}}


id: PR:O94562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1771.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.03c","synonyms":[{"name":"Spom972h-SPBC1773.03c","type":"exact"}],"termid":"PR:O94562"}


id: PBO:0064361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate transmembrane protein, androgen induced 1","termid":"PBO:0064361"}


id: MONDO:0005600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian adenocarcinoma (obsolete MONDO:0005600)","termid":"MONDO:0005600","xrefs":{"Monarch":{"xref_id":"0005600"}}}


id: MONDO:1012200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal motility disorder, non-human animal","termid":"MONDO:1011661"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esophageal motility disorder, dog","secondary_identifiers":["OMIA:000738-9615"],"termid":"MONDO:1012200","xrefs":{"Monarch":{"xref_id":"1012200"}}}


id: GO:0044436
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a thylakoid, a sac-like vesicle that bears the photosynthetic pigments in photosynthetic organisms.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid part (obsolete GO:0044436)","termid":"GO:0044436"}


id: GO:0023018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which signal transmission via a diffusible molecule is initiated by a T cell.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete T cell activation of signal transmission via diffusible molecule (obsolete GO:0023018)","synonyms":[{"name":"T cell activation of signal transmission via diffusible molecule","type":"exact"}],"termid":"GO:0023018"}


id: PBO:0082902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys2His2 zinc-finger transcriptional repressor; involved in alkaline responsive gene repression as part of adaptation to alkaline conditions; involved in cell wall assembly; required for alkaline pH-stimulated haploid invasive growth and sporulation; activated by alkaline-dependent proteolytic processing which results in removal of the C-terminal tail; similar to A. nidulans PacC","termid":"PBO:0082902"}


id: MONDO:0600029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased lung volume and inadequate ventilation due to parenchymal lung disorders (e.g., interstitial pulmonary fibrosis) or extrapulmonary disorders (e.g., scoliosis). Patients present with shortness of breath and cough.","definition_xrefs":["NCIT:C91762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive pulmonary disease","secondary_identifiers":["MEDGEN:43209","SCTID:36485005","UMLS:C0085581"],"synonyms":[{"name":"Restrictive lung disease (disorder)","type":"exact"},{"name":"restrictive lung disease","type":"exact"}],"termid":"MONDO:0600029","xrefs":{"Monarch":{"xref_id":"0600029"}}}


id: GO:0035569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The trimethylation of the N-terminal proline of proteins to form the derivative N,N,N-trimethylproline.","definition_xrefs":["PMID:20668449"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline trimethylation (obsolete GO:0035569)","synonyms":[{"name":"N-terminal peptidyl-proline trimethylation","type":"exact"}],"termid":"GO:0035569"}


id: MONDO:1011046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrolithiasis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis, non-human animal","termid":"MONDO:1010260"},{"relation_name":"is_a","term_name":"urolithiasis, domestic cat","termid":"MONDO:1011080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrolithiasis, domestic cat","secondary_identifiers":["OMIA:000709-9685"],"termid":"MONDO:1011046","xrefs":{"Monarch":{"xref_id":"1011046"}}}


id: PBO:0059251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L20","termid":"PBO:0059251"}


id: PBO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.25.1","termid":"PBO:0000325"}


id: MONDO:0012385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal chondrodysplasia with cone-shaped epiphyses, normal hair, and normal hands","secondary_identifiers":["OMIM:609989","MEDGEN:355877","MESH:C537354","UMLS:C1864944"],"synonyms":[{"name":"cupped metaphyses and cone-Shaped epiphyses without alopecia or brachydactyly","type":"related"},{"name":"metaphyseal chondrodysplasia with cone-shaped epiphyses, normal hair, and normal hands","type":"exact"}],"termid":"MONDO:0012385","xrefs":{"Monarch":{"xref_id":"0012385"}}}


id: MONDO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patent foramen ovale (obsolete MONDO:0001759)","termid":"MONDO:0001759","xrefs":{"Monarch":{"xref_id":"0001759"}}}


id: GO:0051847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating the symbiont complement system, e.g. by possessing complement receptors which mediate attachment to, then infection of, symbiont macrophages, which are eventually destroyed. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","gene_count":0,"genotype_count":0,"name":"obsolete active evasion of symbiont immune response via regulation of symbiont complement system (obsolete GO:0051847)","synonyms":[{"name":"active evasion of symbiont immune response via regulation of symbiont complement system","type":"exact"},{"name":"active immune evasion via modulation of symbiont complement system","type":"exact"},{"name":"active immune evasion via regulation of symbiont complement system","type":"exact"}],"termid":"GO:0051847"}


id: PBO:0082796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U5 snRNP complex; required for splicing of U3 precursors; originally described as a splicing factor specifically required for splicing pre-mRNA of the MATa1 cistron","termid":"PBO:0082796"}


id: PBO:0043108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 18","termid":"PBO:0043108"}


id: PBO:0087870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional co-activator that regulates mating-type-specific genes; targets the transcription factor Mcm1p to the promoters of alpha-specific genes; one of two genes encoded by the MATalpha mating type cassette","termid":"PBO:0087870"}


id: MONDO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Presence or formation of gallstones in the common bile duct.","definition_xrefs":["MESH:D042883"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"excluded_subClassOf","term_name":"gallbladder disorder","termid":"MONDO:0005281"},{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"gallstones","termid":"MONDO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"choledocholithiasis","secondary_identifiers":["UMLS:C0701818","MEDGEN:148784","MedDRA:10049891","DOID:11755","EFO:1000865"],"termid":"MONDO:0006699","xrefs":{"Monarch":{"xref_id":"0006699"}}}


id: MONDO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease caused by infection with Murray Valley encephalitis virus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Murray valley encephalitis","secondary_identifiers":["MEDGEN:509134","SCTID:66454007","UMLS:C0153066","icd11.foundation:1040970454","DOID:10842","ICD9:062.4","ICD10CM:A83.4"],"synonyms":[{"name":"Australian X disease","type":"exact"},{"name":"Australian encephalitis","type":"exact"},{"name":"Murray Valley encephalitis virus caused disease or disorder","type":"exact"},{"name":"Murray Valley encephalitis virus disease or disorder","type":"exact"},{"name":"Murray Valley encephalitis virus infectious disease","type":"exact"}],"termid":"MONDO:0001137","xrefs":{"Monarch":{"xref_id":"0001137"}}}


id: PBO:0074001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 2","termid":"PBO:0074001"}


id: PBO:0066681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 3","termid":"PBO:0066681"}


id: PBO:0087571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; required for nucleotide excision repair, target for transcriptional activators; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087571"}


id: PATO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000307 relative age value (obsolete PATO:0000307)","termid":"PATO:0000307"}


id: GO:1904205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23470307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle hypertrophy","termid":"GO:1904204"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle hypertrophy","termid":"GO:0014734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle hypertrophy","synonyms":[{"name":"down regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"down-regulation of skeletal muscle hypertrophy","type":"exact"},{"name":"downregulation of skeletal muscle hypertrophy","type":"exact"},{"name":"inhibition of skeletal muscle hypertrophy","type":"narrow"}],"termid":"GO:1904205"}


id: GO:0098946
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic endocytic zone membrane (obsolete GO:0098946)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098946"}


id: PATO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape.","definition_xrefs":["PATOC:GVG","Chemistry:http://chemistry.about.com/od/chemistryglossary/a/gasdefinition.htm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a gas","synonyms":[{"name":"gaseous","type":"exact"}],"termid":"PATO:0001547"}


id: GO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha,15-trihydroxyprosta-5,13-dienoate + NADP+ = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate + NADPH.","definition_xrefs":["EC:1.1.1.189","MetaCyc:PROSTAGLANDIN-E2-9-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"prostaglandin E2 9-reductase activity","secondary_identifiers":["Reactome:R-HSA-2161651","RHEA:24508"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 9-oxidoreductase activity","type":"related"},{"name":"9-keto-prostaglandin E(2) reductase activity","type":"related"},{"name":"9-keto-prostaglandin E2 reductase activity","type":"related"},{"name":"9-ketoprostaglandin reductase activity","type":"related"},{"name":"PGE(2) 9-ketoreductase activity","type":"related"},{"name":"PGE(2) 9-oxoreductase activity","type":"related"},{"name":"PGE-9-ketoreductase activity","type":"related"},{"name":"PGE2 9-ketoreductase activity","type":"related"},{"name":"PGE2 9-oxoreductase activity","type":"related"},{"name":"PGE2-9-OR","type":"related"},{"name":"PGE2-9-ketoreductase activity","type":"related"},{"name":"prostaglandin E 9-ketoreductase activity","type":"related"},{"name":"prostaglandin E2-9-oxoreductase activity","type":"related"},{"name":"prostaglandin-E(2) 9-oxoreductase activity","type":"related"},{"name":"prostaglandin-E2 9-oxoreductase activity","type":"related"},{"name":"reductase, 15-hydroxy-9-oxoprostaglandin","type":"related"}],"termid":"GO:0050221"}


id: FYPO:0001657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal serine import","synonyms":[{"name":"abnormal L-serine import","type":"exact"},{"name":"abnormal L-serine import across plasma membrane","type":"exact"},{"name":"abnormal serine import during mitotic cell cycle","type":"related"},{"name":"abnormal serine import during vegetative growth","type":"exact"},{"name":"abnormal serine import into cell","type":"exact"},{"name":"abnormal serine uptake","type":"exact"}],"termid":"FYPO:0001657"}


id: PBO:0070870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 1","termid":"PBO:0070870"}


id: PBO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 3","termid":"PBO:0071975"}


id: GO:0018309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a linkage between a protein amino acid and flavin mononucleotide (FMN).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage (obsolete GO:0018309)","termid":"GO:0018309"}


id: PR:O94465
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.07c","synonyms":[{"name":"Spom972h-cms1","type":"exact"}],"termid":"PR:O94465"}


id: PBO:0069184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 438, pseudogene","termid":"PBO:0069184"}


id: SO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given regions is greater than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_gain","synonyms":[{"name":"copy number gain","type":"exact"},{"name":"gain","type":"related"}],"termid":"SO:0001742"}


id: PR:Q9P370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein bud20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.11c","synonyms":[{"name":"Spom972h-SPAC19B12.11c","type":"exact"}],"termid":"PR:Q9P370"}


id: PBO:0077270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 11","termid":"PBO:0077270"}


id: MONDO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the cerebral hemisphere.","definition_xrefs":["NCIT:C5433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain hemangioma","termid":"MONDO:0003428"},{"relation_name":"is_a","term_name":"benign neoplasm of cerebrum","termid":"MONDO:0021497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral hemangioma","secondary_identifiers":["UMLS:C0877388","DOID:6621","MEDGEN:164084"],"synonyms":[{"name":"angioma of cerebral hemispheres","type":"exact"},{"name":"angioma of cerebrum","type":"exact"},{"name":"angioma of the cerebral hemispheres","type":"exact"},{"name":"angioma of the cerebrum","type":"exact"},{"name":"cerebral angioma","type":"exact"},{"name":"cerebral hemangioma","type":"exact"},{"name":"cerebral hemispheric angioma","type":"exact"},{"name":"cerebral hemispheric hemangioma","type":"exact"},{"name":"hemangioma of cerebral hemispheres","type":"exact"},{"name":"hemangioma of cerebrum","type":"exact"},{"name":"hemangioma of telencephalon","type":"exact"},{"name":"hemangioma of the cerebral hemispheres","type":"exact"},{"name":"hemangioma of the cerebrum","type":"exact"},{"name":"telencephalon hemangioma","type":"exact"}],"termid":"MONDO:0003948","xrefs":{"Monarch":{"xref_id":"0003948"}}}


id: GO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-nonaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:jl","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nonaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043429)","synonyms":[{"name":"2-nonaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043429"}


id: GO:0160075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a non-canonical inflammasome complex.","definition_xrefs":["PMID:27291964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"non-canonical inflammasome complex assembly","termid":"GO:0160075"}


id: FYPO:0000391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which traversing the start control point of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal passage through START of mitotic cell cycle","synonyms":[{"name":"cell cycle passage through START: normal","type":"related"},{"name":"normal mitotic cell cycle passage through START","type":"exact"},{"name":"normal passage through START of mitotic cell cycle during vegetative growth","type":"exact"}],"termid":"FYPO:0000391"}


id: GO:0102391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + decanoate + CoA = AMP + diphosphate + decanoyl-CoA.","definition_xrefs":["GOC:pz","RHEA:33627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medium-chain fatty acid-CoA ligase activity","termid":"GO:0031956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"decanoate-CoA ligase activity","secondary_identifiers":["MetaCyc:RXN-13614"],"termid":"GO:0102391"}


id: PBO:0052080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 5","termid":"PBO:0052080"}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: GO:0010706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gangliosides that begins with the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group.","definition_xrefs":["GOC:tb","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioside biosynthetic process","termid":"GO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ganglioside biosynthetic process via lactosylceramide","synonyms":[{"name":"biosynthesis of lactosylceramide precursor to ganglioside","type":"related"},{"name":"ganglioside biosynthesis via lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide biosynthesis leading to ganglioside","type":"related"},{"name":"lactosylceramide biosynthetic process leading to ganglioside","type":"related"}],"termid":"GO:0010706"}


id: PBO:0050414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 3","termid":"PBO:0050414"}


id: PBO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 12","termid":"PBO:0072135"}


id: MONDO:1010825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly, non-human animal","termid":"MONDO:1010160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, dog","secondary_identifiers":["OMIA:000963-9615"],"termid":"MONDO:1010825","xrefs":{"Monarch":{"xref_id":"1010825"}}}


id: GO:0036498
data:
  {"annotated_genes":["SJAG_04435","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68065,94990],"is_not":false,"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum stress sensor IRE1 (Inositol-requiring transmembrane kinase/endonuclease). Begins with activation of IRE1 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. One target of activated IRE1 is the transcription factor HAC1 in yeast, or XBP1 in mammals; IRE1 cleaves an intron of a mRNA coding for HAC1/XBP1 to generate an activated HAC1/XBP1 transcription factor, which controls the up regulation of UPR-related genes. At least in mammals, IRE1 can also signal through additional intracellular pathways including JNK and NF-kappaB.","definition_xrefs":["GOC:bf","PMID:22013210","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00790":null,"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"IRE1-mediated unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-381070"],"synonyms":[{"name":"ERN1-mediated unfolded protein response","type":"related"},{"name":"IRE1 branch of UPR","type":"exact"},{"name":"IRE1 signal transduction pathway","type":"broad"},{"name":"IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"IRE1alpha unfolded protein response","type":"narrow"},{"name":"IRE1p unfolded protein response","type":"narrow"},{"name":"UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"inositol-requiring enzyme 1-mediated unfolded protein response","type":"related"},{"name":"inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:0036498","terms_by_termid":{"GO:0036498":null}}


id: MONDO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of spastic cerebral palsy characterized by increased muscle tone of the arm and leg on the same side of the body.","definition_xrefs":["NCIT:C116905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic hemiplegia","secondary_identifiers":["ICD9:343.1","SCTID:79633009","ICD9:342.10","MEDGEN:56345","icd11.foundation:1030700023","UMLS:C0154694","DOID:10967"],"synonyms":[{"name":"congenital hemiplegia","type":"related"},{"name":"hemiplegic cerebral palsy","type":"exact"},{"name":"hemiplegic infantile cerebral palsy","type":"exact"},{"name":"spastic hemiplegic cerebral palsy","type":"exact"}],"termid":"MONDO:0001168","xrefs":{"Monarch":{"xref_id":"0001168"}}}


id: PBO:0038329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_receptor","termid":"PBO:0038329"}


id: PR:G2TRP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tom5 gene.","definition_xrefs":["UniProtKB:G2TRP7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.19","synonyms":[{"name":"Spom972h-tom5","type":"exact"}],"termid":"PR:G2TRP7"}


id: MONDO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Leigh syndrome with leukodystrophy (obsolete MONDO:0016815)","secondary_identifiers":["Orphanet:255241"],"synonyms":[{"name":"Leigh disease with leukodystrophy","type":"exact"},{"name":"infantile subacute necrotizing encephalopathy with leukodystrophy","type":"exact"}],"termid":"MONDO:0016815","xrefs":{"Monarch":{"xref_id":"0016815"}}}


id: GO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte degranulation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of leukocyte degranulation","synonyms":[{"name":"regulation of immune cell degranulation","type":"exact"},{"name":"regulation of immune cell granule exocytosis","type":"exact"},{"name":"regulation of leucocyte degranulation","type":"exact"},{"name":"regulation of leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043300"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: MONDO:1011127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular regression syndrome, non-human animal","termid":"MONDO:1010281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, horse","secondary_identifiers":["OMIA:001535-9796"],"termid":"MONDO:1011127","xrefs":{"Monarch":{"xref_id":"1011127"}}}


id: GO:0071872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to epinephrine","termid":"GO:0071871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to epinephrine stimulus","synonyms":[{"name":"cellular response to adrenaline stimulus","type":"exact"}],"termid":"GO:0071872"}


id: GO:0018870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-aminobenzoate, a derivative of benzoic acid with an NH2 group attached to C2, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic benzoate metabolic process","termid":"GO:0018875"},{"relation_name":"is_a","term_name":"anthranilate metabolic process","termid":"GO:0043420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"anaerobic 2-aminobenzoate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:abz"],"synonyms":[{"name":"anaerobic 2-aminobenzoate metabolism","type":"exact"}],"termid":"GO:0018870"}


id: MONDO:0020002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare surgical thoracic disease (obsolete MONDO:0020002)","secondary_identifiers":["Orphanet:97962"],"termid":"MONDO:0020002","xrefs":{"Monarch":{"xref_id":"0020002"}}}


id: MONDO:0008113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schilbach-Rott syndrome (SRS) is an autosomal dominant dysmorphic disorder that is characterized by dysmorphic facies with hypotelorism, blepharophimosis, and cleft palate, and the frequent occurrence of hypospadias in males.","definition_xrefs":["Orphanet:2353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schilbach-Rott syndrome","secondary_identifiers":["MEDGEN:371716","MESH:C563509","OMIM:164220","UMLS:C1834038","GARD:2930","SCTID:721902002"],"synonyms":[{"name":"BRSS","type":"exact"},{"name":"Schilbach-Rott syndrome","type":"exact"},{"name":"blepharofacioskeletal syndrome","type":"related"},{"name":"cleft palate, hypotelorism, and hypospadias","type":"related"},{"name":"hypotelorism cleft palate hypospadias","type":"related"},{"name":"hypotelorism-cleft palate-hypospadias syndrome","type":"exact"},{"name":"ocular hypotelorism, submucosal cleft palate, and hypospadias","type":"related"}],"termid":"MONDO:0008113","xrefs":{"Monarch":{"xref_id":"0008113"}}}


id: PBO:0027784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation","termid":"PBO:0027784"}


id: GO:0004522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribonuclease A activity","secondary_identifiers":["Wikipedia:Ribonuclease_A"],"synonyms":[{"name":"RNase A activity","type":"related"},{"name":"RNase I activity","type":"related"},{"name":"RNase activity","type":"broad"},{"name":"S-genotype-assocd. glycoproteins","type":"related"},{"name":"SLSG glycoproteins","type":"related"},{"name":"alkaline ribonuclease activity","type":"exact"},{"name":"ceratitis capitata alkaline ribonuclease activity","type":"exact"},{"name":"endoribonuclease I","type":"related"},{"name":"gene S glycoproteins","type":"related"},{"name":"gene S locus-specific glycoproteins","type":"related"},{"name":"pancreatic RNase activity","type":"related"},{"name":"pancreatic ribonuclease activity","type":"narrow"},{"name":"ribonuclease I activity","type":"related"},{"name":"ribonucleate 3'-pyrimidino-oligonucleotidohydrolase activity","type":"exact"},{"name":"ribonucleic phosphatase activity","type":"exact"}],"termid":"GO:0004522"}


id: GO:1904327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cytosolic proteasome complex.","definition_xrefs":["PMID:17000876","GO_REF:0000087","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytosolic proteasome complex","synonyms":[{"name":"protein localisation in cytosolic proteasome complex","type":"exact"},{"name":"protein localisation to cytosolic proteasome complex","type":"exact"},{"name":"protein localization in cytosolic proteasome complex","type":"exact"}],"termid":"GO:1904327"}


id: PBO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein gamma","termid":"PBO:0042684"}


id: PBO:0069867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1154, pseudogene","termid":"PBO:0069867"}


id: PBO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA involved in NHEJ oncogenic ligation efficiency","termid":"PBO:0061027"}


id: MONDO:0015556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"nodular urticaria pigmentosa","secondary_identifiers":["UMLS:C5680684","Orphanet:158772","GARD:20035","MEDGEN:1843440"],"termid":"MONDO:0015556","xrefs":{"Monarch":{"xref_id":"0015556"}}}


id: PBO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 28 pseudogene","termid":"PBO:0062149"}


id: MONDO:0014728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the CARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 27","secondary_identifiers":["MEDGEN:1799031","GARD:17856","OMIM:616672","UMLS:C5567608","Orphanet:477774","DOID:0111489"],"synonyms":[{"name":"CARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in CARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 27","type":"exact"}],"termid":"MONDO:0014728","xrefs":{"Monarch":{"xref_id":"0014728"}}}


id: GO:0034612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tumor necrosis factor","synonyms":[{"name":"response to TNF","type":"exact"}],"termid":"GO:0034612"}


id: FYPO:0000489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion distribution is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrial distribution","synonyms":[{"name":"abnormal mitochondrial distribution during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial distribution during vegetative growth","type":"exact"},{"name":"mitochondrial distribution: abnormal","type":"related"}],"termid":"FYPO:0000489"}


id: MONDO:0005089
data:
  {"annotated_genes":["SJAG_03689","SJAG_04287","SJAG_04213","SJAG_01111","SJAG_05313","SJAG_04755","SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[88004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[87018,87019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89193,89194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A usually aggressive malignant neoplasm of the soft tissue or bone. It arises from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels. Sarcomas occur in both children and adults. The prognosis depends largely on the degree of differentiation (grade) of the neoplasm. Representative subtypes are liposarcoma, leiomyosarcoma, osteosarcoma, and chondrosarcoma.","definition_xrefs":["NCIT:C9118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00490":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04287":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:171.7","DOID:1115","ICD9:171.2","ICD9:171.5","ICD9:171.9","ICD9:171.4","ICD9:171.0","SCTID:424413001","UMLS:C1261473","EFO:0000691","ICDO:8800/3","ICD9:171.8","ICD9:171.6","MEDGEN:224714","ICD9:171.3","ICD9:171","MESH:D012509"],"synonyms":[{"name":"mesenchymal tumor, malignant","type":"exact"},{"name":"sarcoma","type":"exact"},{"name":"sarcoma of soft tissue and bone","type":"exact"},{"name":"sarcoma of the soft tissue and bone","type":"exact"},{"name":"sarcoma, malignant","type":"exact"},{"name":"tumor of soft tissue and skeleton","type":"related"},{"name":"tumour of soft tissue and skeleton","type":"related"}],"termid":"MONDO:0005089","terms_by_termid":{"MONDO:0002629":null,"MONDO:0011655":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0005089"}}}


id: MONDO:0019657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sporadic idiopathic steroid-resistant nephrotic syndrome with minimal changes (obsolete MONDO:0019657)","secondary_identifiers":["Orphanet:93221"],"termid":"MONDO:0019657","xrefs":{"Monarch":{"xref_id":"0019657"}}}


id: MONDO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by bluish-black discoloration of the cartilaginous tissues due to accumulation of homogentisic acid. It is associated with alkaptonuria. Signs and symptoms include dark urine, skin pigmentation, and arthritis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ochronosis disorder","secondary_identifiers":["NCIT:C84938","HP:0030764","MEDGEN:45177","DOID:14223","MESH:D009794","SCTID:410042009","ICD9:270.2","UMLS:C0028817"],"synonyms":[{"name":"ochronosis","type":"exact"}],"termid":"MONDO:0001910","xrefs":{"Monarch":{"xref_id":"0001910"}}}


id: PBO:0111863
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1 domain","termid":"PBO:0111863"}


id: PBO:0029178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029178"}


id: PBO:0069400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 660, pseudogene","termid":"PBO:0069400"}


id: PBO:0078111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-1","termid":"PBO:0078111"}


id: MONDO:0011638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroferritinopathy is a late-onset type of neurodegeneration with brain iron accumulation (NBIA) characterized by progressive chorea or dystonia and subtle cognitive deficits.","definition_xrefs":["Orphanet:157846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"neuroferritinopathy","secondary_identifiers":["ICD9:333.0","GARD:10686","OMIM:606159","DOID:0110737","MESH:C548080","MEDGEN:381211","NANDO:1200539","NANDO:1200542","SCTID:699299001","UMLS:C1853578"],"synonyms":[{"name":"NBIA3","type":"exact"},{"name":"Neuroferritinopathy; basal ganglia disease, adult-onset","type":"exact"},{"name":"adult basal ganglia disease","type":"exact"},{"name":"basal ganglia disease adult-onset","type":"related"},{"name":"basal ganglia disease, adult-onset","type":"related"},{"name":"ferritin-related neurodegeneration","type":"exact"},{"name":"hereditary ferritinopathy","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 3","type":"related"},{"name":"neurodegeneration with brain iron accumulation type 3","type":"exact"},{"name":"neuroferritinopathy","type":"exact"}],"termid":"MONDO:0011638","xrefs":{"Monarch":{"xref_id":"0011638"}}}


id: GO:0062160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity which is a network of tubules and vessicles and is part of the contractile vacuole complex. It is involved in the discharge of water externally. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile vacuole complex","termid":"GO:0062159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spongiome","termid":"GO:0062160"}


id: MONDO:1011170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, chicken","secondary_identifiers":["OMIA:000750-9031"],"termid":"MONDO:1011170","xrefs":{"Monarch":{"xref_id":"1011170"}}}


id: PBO:0053812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1072","termid":"PBO:0053812"}


id: SO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in the CDS region that causes a conformational change in the resulting polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3D_polypeptide_structure_variant","termid":"SO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conformational_change_variant","synonyms":[{"name":"conformational change variant","type":"exact"}],"termid":"SO:0001601"}


id: GO:0000423
data:
  {"annotated_genes":["SJAG_01274","SJAG_05017","SJAG_01382","SJAG_04232","SJAG_03435","SJAG_00645","SJAG_04502","SJAG_01251","SJAG_04655","SJAG_00079","SJAG_01135","SJAG_02699","SJAG_04219","SJAG_02414","SJAG_01073","SJAG_03100","SJAG_00004","SJAG_00059","SJAG_01283","SJAG_05261","SJAG_01876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61093,67065,67130,72281,74045,74334,74464,74883,75196,78557,78683,78800,81407,81488,81894,94805,96535,96881,101915,112656,117243],"is_not":false,"summary":null,"term":"GO:0000423"}]},"cv_name":"biological_process","definition":"The selective autophagy process in which a mitochondrion is degraded by macroautophagy.","definition_xrefs":["PMID:15798367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00645":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03435":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"mitophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Mitophagy","Reactome:R-HSA-5205647"],"synonyms":[{"name":"macromitophagy","type":"exact"}],"termid":"GO:0000423","terms_by_termid":{"GO:0000423":null}}


id: PBO:0089100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssz1","termid":"PBO:0089100"}


id: FYPO:0004615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during interphase of the mitotic cell cycle in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a cytoplasmic microtubule, occurs at a higher rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0046785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of mitotic interphase microtubule polymerization","synonyms":[{"name":"increased interphase microtubule plus end growth rate","type":"exact"},{"name":"increased interphase microtubule polymerization rate","type":"exact"},{"name":"increased rate of cytoplasmic microtubule polymerization during mitotic interphase","type":"exact"},{"name":"increased rate of interphase cytoplasmic microtubule polymerization","type":"exact"},{"name":"increased rate of interphase microtubule growth","type":"exact"},{"name":"increased rate of interphase microtubule polymerisation","type":"exact"},{"name":"increased rate of interphase microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"increased rate of interphase microtubule polymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0004615"}


id: MONDO:0012548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kostmann syndrome is a rare, severe, congenital neutropenia disorder characterized by a lack of mature neutrophils (absolute neutrophil counts less than 500 cells/mm3) associated with frequent, recurrent bacterial infections (e.g. otitis media, pneumonia, sinusitis, urinary tract infections, abscesses of skin and/or liver) and increased promyelocytes in the bone marrow. Periodontal disease, as well as neurological symptoms, such as cognitive impairment, severe neurodegeneration and epilepsy, have been reported in some patients.","definition_xrefs":["Orphanet:99749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Kostmann syndrome","secondary_identifiers":["GARD:302","OMIM:610738","MEDGEN:1713491","DOID:0112133","icd11.foundation:421553273","NCIT:C166153","UMLS:C5235141"],"synonyms":[{"name":"Kostmann disease","type":"related"},{"name":"SCN3","type":"related"},{"name":"agranulocytosis infantile","type":"related"},{"name":"agranulocytosis, infantile","type":"related"},{"name":"infantile agranulocytosis","type":"exact"},{"name":"neutropenia, severe congenital 3, autosomal recessive","type":"exact"},{"name":"neutropenia, severe congenital, 3, autosomal recessive","type":"related"},{"name":"severe congenital neutropenia autosomal recessive 3","type":"related"},{"name":"severe congenital neutropenia type 3","type":"exact"}],"termid":"MONDO:0012548","xrefs":{"Monarch":{"xref_id":"0012548"}}}


id: GO:0016020
data:
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id: MONDO:0035694
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to RELA haploinsufficiency","secondary_identifiers":["GARD:22392","MEDGEN:1843216","Orphanet:596759","UMLS:C5680288"],"synonyms":[{"name":"CID due to RELA haploinsufficiency","type":"exact"}],"termid":"MONDO:0035694","xrefs":{"Monarch":{"xref_id":"0035694"}}}


id: PBO:0025430
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Survival Motor Neuron","termid":"PBO:0025430"}


id: PBO:0085497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome polyubiquitin receptor; non-ATPase subunit of the 19S regulatory particle (RP) of the 26S proteasome that links the RP base to the lid; N-terminus plays a role in the assembly of the regulatory particle (RP); ubiquitin-interacting motif selectively binds to polyubiquitin chains; homolog of the mammalian S5a protein","termid":"PBO:0085497"}


id: PBO:0065279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C","termid":"PBO:0065279"}


id: MONDO:0030696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 20 (mngie type)","secondary_identifiers":["UMLS:C5676934","DOID:0070451","OMIM:619780","MEDGEN:1804209"],"synonyms":[{"name":"MTDPS20","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 20 (mngie type)","type":"exact"},{"name":"mitochondrial neurogastrointestinal encephalomyopathy syndrome, lig3-related","type":"exact"}],"termid":"MONDO:0030696","xrefs":{"Monarch":{"xref_id":"0030696"}}}


id: GO:2000352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of endothelial cell apoptotic process","termid":"GO:2000351"},{"relation_name":"negatively_regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell apoptotic process","synonyms":[{"name":"negative regulation of apoptosis of endothelial cells","type":"exact"},{"name":"negative regulation of endothelial cell apoptosis","type":"narrow"},{"name":"negative regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of endothelial cells","type":"exact"},{"name":"negative regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000352"}


id: GO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of different species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb","GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-species biofilm formation","secondary_identifiers":["GO:0090607","GO:0044401","GO:0044400","GO:0090608"],"synonyms":[{"name":"multi-species biofilm formation in or on host organism","type":"narrow"},{"name":"multi-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"multi-species submerged biofilm formation","type":"narrow"},{"name":"multi-species surface biofilm formation","type":"related"}],"termid":"GO:0044399"}


id: GO:0019433
data:
  {"annotated_genes":["SJAG_03604","SJAG_02089","SJAG_01036","SJAG_02543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73248,93789,100391,119613],"is_not":false,"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol catabolic process","termid":"GO:0046464"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LIPAS-PWY","Reactome:R-HSA-163560"],"synonyms":[{"name":"triacylglycerol catabolic process","type":"exact"},{"name":"triacylglycerol catabolism","type":"exact"},{"name":"triglyceride breakdown","type":"exact"},{"name":"triglyceride catabolism","type":"exact"},{"name":"triglyceride degradation","type":"exact"}],"termid":"GO:0019433","terms_by_termid":{"GO:0019433":null}}


id: PBO:0089014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26","termid":"PBO:0089014"}


id: MONDO:0700240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitreoretinochoroidopathy caused by a heterozygous variant in the BEST1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"BEST1-related vitreoretinochoroidopathy","synonyms":[{"name":"ADVRIC","type":"exact"},{"name":"BEST1-related vitreoretinochoroidopathy","type":"exact"}],"termid":"MONDO:0700240","xrefs":{"Monarch":{"xref_id":"0700240"}}}


id: PBO:0041184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 8","termid":"PBO:0041184"}


id: FYPO:0000996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other when the cell is subject to nitrogen starvation. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"tapered cell during nitrogen starvation","synonyms":[{"name":"bottle-shaped cell during nitrogen starvation","type":"exact"},{"name":"cell morphology, bottle/skittle during nitrogen starvation","type":"exact"},{"name":"skittle-shaped cell during nitrogen starvation","type":"exact"},{"name":"tapered cell during nitrogen depletion","type":"exact"},{"name":"tapered cell during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000996"}


id: MONDO:0100502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Biallelic constitutional/germline loss-of-function NTHL1 variants confer predisposition to tumor formation demonstrating ‘COSMIC Signature 30’ mutation profile. Tumors have been reported at multiple primary sites; in particular adenomatous polyposis of colon (~10-50 polyps), colorectal cancer, and breast cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTHL1-deficiency tumor predisposition syndrome","termid":"MONDO:0100502","xrefs":{"Monarch":{"xref_id":"0100502"}}}


id: GO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-GlcUA to asioloorosomucoid.","definition_xrefs":["GOC:bf","PMID:12511570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"asioloorosomucoid beta-1,3-glucuronosyltransferase activity","termid":"GO:0046988"}


id: MONDO:0014959
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89056],"is_not":false,"summary":null,"term":"MONDO:0014959"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 12A (cardiomyopathic type), autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080130","MEDGEN:934643","UMLS:C4310676","OMIM:617184"],"synonyms":[{"name":"MTDPS12A","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12A (cardiomyopathic type) AD","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant; MTDPS12A","type":"exact"}],"termid":"MONDO:0014959","terms_by_termid":{"MONDO:0014959":null},"xrefs":{"Monarch":{"xref_id":"0014959"}}}


id: GO:0043173
data:
  {"annotated_genes":["SJAG_00533","SJAG_01070","SJAG_01859","SJAG_04467","SJAG_03708","SJAG_04709","SJAG_01500","SJAG_06634","SJAG_04123","SJAG_04354","SJAG_01298","SJAG_00957","SJAG_04713","SJAG_04634","SJAG_03298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57274,75706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[94863,69603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[77416,103136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[77417,65924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[81870,72566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[90896,92532,111608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[93865,69602,90322,89324,94864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[110254,77418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01298":null,"SJAG_01500":null,"SJAG_01859":null,"SJAG_03298":null,"SJAG_03708":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04467":null,"SJAG_04634":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleotide salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nucleotide_salvage","Reactome:R-HSA-8956321"],"termid":"GO:0043173","terms_by_termid":{"GO:0019358":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044206":null,"GO:0044209":null,"GO:0044211":null}}


id: MONDO:0026141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic urticaria (obsolete MONDO:0026141)","secondary_identifiers":["Orphanet:182734"],"termid":"MONDO:0026141","xrefs":{"Monarch":{"xref_id":"0026141"}}}


id: PBO:0003580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase Erg32","termid":"PBO:0003580"}


id: MONDO:1012818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypotrichosis that occurs in cats due to a mutation in the HR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypotrichosis, non-human animal","termid":"MONDO:1012977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, HR-related, domestic cat","secondary_identifiers":["OMIA:002229-9685"],"termid":"MONDO:1012818","xrefs":{"Monarch":{"xref_id":"1012818"}}}


id: MONDO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung carcinoma characterized by the presence of malignant non-keratinizing squamoid cells, mucin-producing cells and intermediate type cells.","definition_xrefs":["NCIT:C45544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"lung colloid adenocarcinoma","termid":"MONDO:0027772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:310949","UMLS:C1708778","DOID:0050932","ONCOTREE:LUMEC","EFO:0006740"],"synonyms":[{"name":"lung mucoepidermoid cancer","type":"exact"},{"name":"lung mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of the lung","type":"related"}],"termid":"MONDO:0005616","xrefs":{"Monarch":{"xref_id":"0005616"}}}


id: MOD:01482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a calcium atom or a cluster containing calcium for hydrogen atoms, or that coordinates a calcium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium containing modified residue","synonyms":[{"name":"CaRes","type":"exact"}],"termid":"MOD:01482"}


id: GO:0050199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E,E)-piperoyl-CoA + piperidine = N-[(E,E)-piperoyl]piperidine + CoA + H+.","definition_xrefs":["RHEA:14561","EC:2.3.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"piperidine N-piperoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03994","MetaCyc:PIPERIDINE-N-PIPEROYLTRANSFERASE-RXN"],"synonyms":[{"name":"(E,E)-piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"},{"name":"piperidine piperoyltransferase activity","type":"related"},{"name":"piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"}],"termid":"GO:0050199"}


id: PBO:0027883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation","termid":"PBO:0027883"}


id: GO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin and contributing to cardiac muscle cell fate commitment. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_heart","PMID:17576928"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:0061317)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:0061317"}


id: MONDO:0003505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a femur.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer of long bone of lower limb","termid":"MONDO:0000952"},{"relation_name":"is_a","term_name":"neoplasm of femur","termid":"MONDO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"femoral cancer","secondary_identifiers":["DOID:5546","MEDGEN:1843484","UMLS:C2362822","SCTID:126583006","MESH:D005266"],"synonyms":[{"name":"cancer of femur","type":"exact"},{"name":"femoral neoplasm","type":"broad"},{"name":"femur cancer","type":"exact"},{"name":"malignant femur neoplasm","type":"exact"},{"name":"malignant neoplasm of femur","type":"exact"},{"name":"neoplasm of femur","type":"broad"}],"termid":"MONDO:0003505","xrefs":{"Monarch":{"xref_id":"0003505"}}}


id: GO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the cell surface protein basigin.","definition_xrefs":["PMID:9360995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-basigin complex","synonyms":[{"name":"ITGA3-ITGB1-BSG complex","type":"narrow"}],"termid":"GO:0071080"}


id: GO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining metal ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of metal ion (obsolete GO:0051238)","synonyms":[{"name":"metal ion retention","type":"exact"},{"name":"metal ion sequestering","type":"exact"},{"name":"metal ion sequestration","type":"exact"},{"name":"metal ion storage","type":"exact"},{"name":"retention of metal ion","type":"exact"},{"name":"sequestration of metal ion","type":"exact"},{"name":"storage of metal ion","type":"exact"}],"termid":"GO:0051238"}


id: PBO:0068392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212B","termid":"PBO:0068392"}


id: PR:O60052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00766","PRO:DNx","PANTHER:PTHR11129:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.04c","secondary_identifiers":["UniProtKB:O60052"],"synonyms":[{"name":"CAAX farnesyltransferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGTase-I-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FNTA","type":"exact"},{"name":"ras proteins prenyltransferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I protein geranyl-geranyltransferase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60052"}


id: PBO:0059782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 8","termid":"PBO:0059782"}


id: PATO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflective quality restricted to a particular wavelength.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"albedo","termid":"PATO:0001295"}


id: PBO:0077181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 5","termid":"PBO:0077181"}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["GOC:signaling","PMID:17615392"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: MONDO:0005336
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id: MONDO:0043693
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id: PBO:0017595
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med18","termid":"PBO:0017595"}


id: MONDO:0013568
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89173,89174],"is_not":false,"summary":null,"term":"MONDO:0013568"}]},"cv_name":"mondo","definition":"Any familial sick sinus syndrome in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"sick sinus syndrome 3, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614090","UMLS:C3279791","MEDGEN:481421"],"synonyms":[{"name":"MYH6 familial sick sinus syndrome","type":"exact"},{"name":"SSS3","type":"related"},{"name":"familial sick sinus syndrome caused by mutation in MYH6","type":"exact"},{"name":"sick sinus syndrome 3","type":"exact"},{"name":"sick sinus syndrome 3, susceptibility to","type":"exact"},{"name":"susceptibility to sick sinus syndrome 3","type":"related"}],"termid":"MONDO:0013568","terms_by_termid":{"MONDO:0013568":null},"xrefs":{"Monarch":{"xref_id":"0013568"}}}


id: PBO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor (predicted)","termid":"PBO:0004395"}


id: GO:0097496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A blood vessel lumenization process that occurs by blood vessel endothelial cells delaminating and aligning along the inner surface of an existing luminal space, extending the open ended lumen, and joining to other blood vessels to form a complete blood vessel.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel lumenization","termid":"GO:0072554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumen ensheathment","termid":"GO:0097496"}


id: GO:0071027
data:
  {"annotated_genes":["SJAG_01540","SJAG_03939","SJAG_05243","SJAG_00961","SJAG_00701","SJAG_04601","SJAG_01064","SJAG_02382","SJAG_04500","SJAG_04818","SJAG_04824","SJAG_01412","SJAG_01717","SJAG_01529","SJAG_04768","SJAG_00425","SJAG_00456","SJAG_01191","SJAG_16455","SJAG_04321","SJAG_04198","SJAG_00452","SJAG_01331","SJAG_04586","SJAG_00854","SJAG_02879","SJAG_01830","SJAG_02275","SJAG_01867","SJAG_01521","SJAG_01818","SJAG_03448","SJAG_04006","SJAG_02720","SJAG_03745","SJAG_03454","SJAG_02005","SJAG_03883","SJAG_04153","SJAG_02622","SJAG_03984","SJAG_03179","SJAG_04084","SJAG_04025","SJAG_01176","SJAG_01431","SJAG_04360","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92514],"is_not":false,"summary":null,"term":"GO:0071027"},{"annotations":[91666],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[120150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"},{"annotations":[76091,91325,73377,74972,96871,102977,117906,94968,117466,74206,98456,73082,90960,64135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[109431,89354,93759,92675,98652,111229,113302,120151,94135,101019,92751,111248,106252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[95336,76358,120152,72027,99164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[118352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[92676,96912,89355,111249,108279,90712,111778,117572,94258,120153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[90244,108238,72378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"},{"annotations":[113858,120154,101703,72377,72032,104939,117395,114765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"},{"annotations":[74207,73378,76844,108441,72028,72373,65818,104028,109434,79466,99166,117468,117908,73083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071035"},{"annotations":[72029,72374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[72030,72375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[108629],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[73084,79467,76845,90250,99172,73379,74208,117471,117911,72031,109440,72376,104032,101546,108445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant RNAs within the nucleus.","definition_xrefs":["PMID:18644474","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00701":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01064":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01717":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04500":null,"SJAG_04586":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear RNA surveillance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"nuclear RNA quality control","type":"exact"},{"name":"nuclear aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071027","terms_by_termid":{"GO:0033621":null,"GO:0071027":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071035":null,"GO:0071036":null,"GO:0071037":null,"GO:0071038":null,"GO:0071039":null,"GO:0071040":null,"GO:0120271":null,"GO:0120272":null,"GO:0180036":null}}


id: PBO:0110387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL antisense RNA 1","termid":"PBO:0110387"}


id: FYPO:0004146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxine:NADP 4-dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal pyridoxine:NADP 4-dehydrogenase activity","termid":"FYPO:0004145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased pyridoxine:NADP 4-dehydrogenase activity","synonyms":[{"name":"reduced pyridoxine:NADP 4-dehydrogenase activity","type":"exact"}],"termid":"FYPO:0004146"}


id: PBO:0110155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated protein, implicated in ribosome assembly or ribosome quality control","termid":"PBO:0110155"}


id: PBO:0110465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 5","termid":"PBO:0110465"}


id: PBO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein-protein_interaction_phenotype","termid":"PBO:0036181"}


id: FYPO:0003583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of formation of foci containing the protein Sad1 is increased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of Sad1 focus formation during response to DNA damage","synonyms":[{"name":"increased rate of Sad1 focus formation during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased rate of Sad1 focus formation during response to DNA damage during vegetative growth","type":"exact"},{"name":"increased rate of accumulation of Sad1 foci during DNA damage response","type":"exact"}],"termid":"FYPO:0003583"}


id: MONDO:0858997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of unknown primary site","secondary_identifiers":["UMLS:C0220647","MEDGEN:113094","NCIT:C8566","Orphanet:631251"],"termid":"MONDO:0858997","xrefs":{"Monarch":{"xref_id":"0858997"}}}


id: GO:0007530
data:
  {"annotated_genes":["SJAG_03221","SJAG_01068","SJAG_03997","SJAG_00769","SJAG_03097","SJAG_01601","SJAG_02401","SJAG_05239","SJAG_06638","SJAG_00399","SJAG_02460","SJAG_02724","SJAG_00320","SJAG_01419","SJAG_01076","SJAG_02226","SJAG_02319","SJAG_01465","SJAG_02556","SJAG_01113","SJAG_01410","SJAG_00073","SJAG_02828","SJAG_00247","SJAG_00757","SJAG_01495","SJAG_02079","SJAG_00293","SJAG_05153","SJAG_01677","SJAG_03006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118231,101046,120893,93126,118560,89796,95281,118873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[91171,101047,120812,108605,110494,102520,89797,91043,112293,117043,108039,112816,99344,118826,98091],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[121141,109023,121140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[94570,98574,100985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[95976,110495,104904,61250],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[95246],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of sexual status of an individual organism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_00769":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03006":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Sex-determination_system"],"termid":"GO:0007530","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: MONDO:0004795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the anatomical structures of the outer ear and ear canal secondary to an infectious process. Bacterial etiology is most common, but fungal infection is also possible. Symptoms include erythema, edema, and pain.","definition_xrefs":["NCIT:C3299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external ear disorder","termid":"MONDO:0002776"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otitis externa","secondary_identifiers":["UMLS:C0029878","ICD10CM:H60","MEDGEN:10505","icd11.foundation:1303990434","DOID:9463","ICD9:380.1","EFO:0009560","NCIT:C79601","SCTID:3135009","MESH:D010032","ICD9:380.10"],"synonyms":[{"name":"external Ear infection","type":"exact"},{"name":"infectious otitis externa","type":"exact"},{"name":"otitis externa","type":"exact"},{"name":"outer Ear infection","type":"exact"},{"name":"swimmer's Ear","type":"exact"},{"name":"swimmer's ear","type":"exact"}],"termid":"MONDO:0004795","xrefs":{"Monarch":{"xref_id":"0004795"}}}


id: GO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP involved in maintaining an unfolded polypeptide structure before folding or to entry into mitochondria and chloroplasts.","definition_xrefs":["EC:3.6.4.9","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperonin ATPase activity (obsolete GO:0003763)","synonyms":[{"name":"chaperonin","type":"exact"},{"name":"chaperonin ATPase activity","type":"exact"}],"termid":"GO:0003763"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["RHEA:23812","EC:1.1.1.208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02548","MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: GO:0035126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the genitalia are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic genitalia morphogenesis","synonyms":[{"name":"post-embryonic genital morphogenesis","type":"related"}],"termid":"GO:0035126"}


id: PBO:0046471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erbb2 interacting protein","termid":"PBO:0046471"}


id: MONDO:0021104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipid infiltration of the hepatic parenchymal cells that is due to alcohol abuse. The fatty changes in the alcoholic fatty liver may be reversible, depending on the amounts of triglycerides accumulated.","definition_xrefs":["MESH:D005235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"},{"relation_name":"is_a","term_name":"alcoholic liver diseases","termid":"MONDO:0043693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"alcoholic fatty liver disease","secondary_identifiers":["MEDGEN:4666","SCTID:50325005","UMLS:C0015696","ICD9:571.0"],"synonyms":[{"name":"alcoholic Steatohepatitis","type":"exact"},{"name":"alcoholic fatty liver","type":"exact"}],"termid":"MONDO:0021104","xrefs":{"Monarch":{"xref_id":"0021104"}}}


id: MONDO:0019832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypopituitarism that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopituitarism","termid":"MONDO:0005152"},{"relation_name":"is_a","term_name":"pituitary deficiency","termid":"MONDO:0015127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired pituitary hormone deficiency","secondary_identifiers":["GARD:19278","MEDGEN:1843262","ICD10CM:E23.0","NANDO:2200313","Orphanet:95502","UMLS:C5681569"],"synonyms":[{"name":"acquired hypopituitarism","type":"exact"}],"termid":"MONDO:0019832","xrefs":{"Monarch":{"xref_id":"0019832"}}}


id: GO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"regulation of T cell homeostatic proliferation","termid":"GO:0046013"},{"relation_name":"positively_regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell homeostatic proliferation","synonyms":[{"name":"activation of T cell homeostatic proliferation","type":"narrow"},{"name":"positive regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"positive regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"positive regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"positive regulation of resting T cell proliferation","type":"exact"},{"name":"stimulation of T cell homeostatic proliferation","type":"narrow"},{"name":"up regulation of T cell homeostatic proliferation","type":"exact"},{"name":"up-regulation of T cell homeostatic proliferation","type":"exact"},{"name":"upregulation of T cell homeostatic proliferation","type":"exact"}],"termid":"GO:0042103"}


id: MONDO:0018855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon form of keratosis pilaris in which there are scar-like follicular depressions and loss of hair.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"keratosis pilaris","termid":"MONDO:0021036"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis pilaris atrophicans","secondary_identifiers":["GARD:18694","MEDGEN:75520","Orphanet:498","DOID:0080751","icd11.foundation:273325594","OMIM:604093","ICD9:757.39","SCTID:400059005","MESH:C537412","UMLS:C0263428"],"synonyms":[{"name":"Atrophodermia reticulata","type":"related"},{"name":"Atrophodermia reticulata symmetrica faciei","type":"related"},{"name":"Atrophodermia vermiculata","type":"related"},{"name":"KPA","type":"related"},{"name":"amelogenesis imperfecta, hypoplastic-hypomaturation, X-linked 2","type":"related"},{"name":"burnett Schwartz Berberian syndrome","type":"related"},{"name":"folliculitis ulerythematosa","type":"related"},{"name":"folliculitis ulerythematosa reticulata","type":"related"},{"name":"honeycomb atrophy","type":"related"},{"name":"keratosis pilaris","type":"related"},{"name":"keratosis pilaris atrophicans","type":"exact"},{"name":"keratosis pilaris atrophicans facies","type":"related"},{"name":"ulerythema ophryogenes","type":"related"},{"name":"ulerythema ophryogenes with multiple congenital anomalies","type":"related"},{"name":"ulerythema ophryogenesis","type":"related"}],"termid":"MONDO:0018855","xrefs":{"Monarch":{"xref_id":"0018855"}}}


id: GO:0061903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that starts or increases the frequency or rate of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:18723082"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061903)","termid":"GO:0061903"}


id: GO:0031477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a dimer of class VII myosin heavy chains and associated light chains. Myosin VII (240 kDa) is predicted to be a dimeric molecule with 5 IQ motifs and a tail region with a short stretch of coiled coil followed by two myosin-tail homology (MyTH4) domains, two talin-binding (FERM) domains and an SH3-domain.","definition_xrefs":["PMID:28660889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin VII complex","termid":"GO:0031477"}


id: MONDO:1012540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"white skin color and iridophoroma, non-human animal","termid":"MONDO:1011901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white skin color and iridophoroma, leopard gecko","secondary_identifiers":["OMIA:002363-481883"],"termid":"MONDO:1012540","xrefs":{"Monarch":{"xref_id":"1012540"}}}


id: PBO:0119980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM5D divergent transcript","termid":"PBO:0119980"}


id: PBO:0047397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO36 intronic transcript 1","termid":"PBO:0047397"}


id: GO:2000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric podocyte development","synonyms":[{"name":"regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000477"}


id: GO:0008953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: penicillin + H2O = a carboxylate + 6-aminopenicillanate.","definition_xrefs":["EC:3.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"penicillin amidase activity","secondary_identifiers":["MetaCyc:PENICILLIN-AMIDASE-RXN","RHEA:18693"],"synonyms":[{"name":"alpha-acylamino-beta-lactam acylhydrolase activity","type":"related"},{"name":"ampicillin acylase activity","type":"related"},{"name":"benzylpenicillin acylase activity","type":"related"},{"name":"novozym 217","type":"related"},{"name":"palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity","type":"exact"},{"name":"penicillin acylase activity","type":"related"},{"name":"penicillin amidohydrolase activity","type":"related"},{"name":"semacylase activity","type":"related"}],"termid":"GO:0008953"}


id: GO:0008413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-7,8-dihydroguanosine triphosphate (8-oxo-GTP) + H2O = 8-oxo-7,8-dihydroguanosine diphosphate (8-oxo-GDP) + phosphate. 8-oxo-7,8-dihydroguanosine triphosphate (8-oxo-GTP) is the oxidised form of the free guanine nucleotide and can act as a potent mutagenic substrate for transcription.","definition_xrefs":["RHEA:60032","PMID:15878881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0047429","GO:0003674"],"is_obsolete":false,"name":"8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity","secondary_identifiers":["EC:3.6.1.69"],"synonyms":[{"name":"7,8-dihydro-8-oxoguanine-triphosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydroguanine triphosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydroguanosine triphosphatase activity","type":"exact"},{"name":"8-oxo-GTPase activity","type":"exact"}],"termid":"GO:0008413"}


id: PR:Q9P7D6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.12 gene.","definition_xrefs":["UniProtKB:Q9P7D6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0303 protein P4H10.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.12","synonyms":[{"name":"Spom972h-SPBP4H10.12","type":"exact"}],"termid":"PR:Q9P7D6"}


id: FYPO:0005252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tamoxifen. Cells stop growing (and may die) at a concentration of tamoxifen that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tamoxifen","synonyms":[{"name":"hypersensitive to tamoxifen","type":"exact"},{"name":"sensitive to tamoxifen during mitotic cell cycle","type":"related"},{"name":"sensitive to tamoxifen during vegetative growth","type":"exact"}],"termid":"FYPO:0005252"}


id: GO:0006079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->6)-beta-D-glucan metabolic process","termid":"GO:0006077"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan catabolic process","synonyms":[{"name":"1,6-beta-D-glucan breakdown","type":"exact"},{"name":"1,6-beta-D-glucan catabolic process","type":"exact"},{"name":"1,6-beta-D-glucan catabolism","type":"exact"},{"name":"1,6-beta-D-glucan degradation","type":"exact"},{"name":"beta-1,6 glucan breakdown","type":"exact"},{"name":"beta-1,6 glucan catabolic process","type":"exact"},{"name":"beta-1,6 glucan catabolism","type":"exact"},{"name":"beta-1,6 glucan degradation","type":"exact"}],"termid":"GO:0006079"}


id: PBO:0082790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Trk1p-Trk2p potassium transport system; 180 kDa high affinity potassium transporter; phosphorylated in vivo and interacts physically with the phosphatase Ppz1p, suggesting Trk1p acitivy is regulated by phosphorylation; TRK1 has a paralog, TRK2, that arose from the whole genome duplication","termid":"PBO:0082790"}


id: PBO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf19","termid":"PBO:0000773"}


id: MONDO:1010106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple acyl-coa dehydrogenase deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple acyl-coa dehydrogenase deficiency, non-human animal","secondary_identifiers":["OMIA:001457"],"termid":"MONDO:1010106","xrefs":{"Monarch":{"xref_id":"1010106"}}}


id: PBO:0053383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 310","termid":"PBO:0053383"}


id: MONDO:0007218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A4 (BDA4) is a congenital malformation characterized by brachymesophalangy affecting mainly the 2nd and the 5th digit.","definition_xrefs":["Orphanet:93394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A4","secondary_identifiers":["SCTID:715721005","MEDGEN:354669","DOID:0110967","MESH:C537097","GARD:990","icd11.foundation:10379198","OMIM:112800","UMLS:C1862139"],"synonyms":[{"name":"BDA4","type":"exact"},{"name":"Brachymesophalangy 2 and 5","type":"related"},{"name":"Brachymesophalangy II and V","type":"exact"},{"name":"Temtamy type brachydactyly","type":"exact"},{"name":"brachydactyly Temtamy type","type":"related"},{"name":"brachydactyly, Temtamy type","type":"exact"},{"name":"brachydactyly, type A4","type":"related"},{"name":"brachymesophalangy II and V","type":"exact"}],"termid":"MONDO:0007218","xrefs":{"Monarch":{"xref_id":"0007218"}}}


id: GO:0060257
data:
  {"annotated_genes":["SJAG_00926","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105503,108221],"is_not":false,"summary":null,"term":"GO:0060257"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the non-sexual aggregation of single-celled organisms.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of flocculation","termid":"GO:0060256"},{"relation_name":"negatively_regulates","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00926":null,"SJAG_03473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901134"],"synonyms":[{"name":"negative regulation of coflocculation","type":"narrow"}],"termid":"GO:0060257","terms_by_termid":{"GO:0060257":null}}


id: FYPO:0007594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitophagy","termid":"FYPO:0000499"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitophagy during nitrogen starvation","synonyms":[{"name":"abolished autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"abolished autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"autophagy of mitochondrion abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007594"}


id: PBO:0074532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA F","termid":"PBO:0074532"}


id: MONDO:0010627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked lymphoproliferative disease is a hereditary immunodeficiency characterized, in the majority of cases, by an inadequate immune response to infection with the Epstein-Barr virus (EBV).","definition_xrefs":["Orphanet:2442"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"X-linked lymphoproliferative syndrome","secondary_identifiers":["UMLS:C0549463","ICD9:238.79","NORD:1865","NCIT:C61246","DOID:0060705","NANDO:2200725","GARD:10915","MedDRA:10068348","NANDO:1200351","MEDGEN:107498","SCTID:77121009"],"synonyms":[{"name":"Duncan disease","type":"exact"},{"name":"Purtilo syndrome","type":"exact"},{"name":"SH2D1A-related lymphoproliferative disease, X-linked","type":"related"},{"name":"X linked Lymphoproliferative Syndrome","type":"exact"},{"name":"X-linked lymphoproliferative disease","type":"related"},{"name":"X-linked lymphoproliferative syndrome","type":"exact"},{"name":"X-linked lymphoproliferative syndrome 1","type":"related"},{"name":"X-linked lymphoproliferative syndrome type 1","type":"narrow"},{"name":"XLP","type":"related"},{"name":"XLP1","type":"narrow"},{"name":"lymphoproliferative syndrome X-linked 1","type":"related"},{"name":"lymphoproliferative syndrome, X-linked","type":"exact"},{"name":"lymphoproliferative syndrome, X-linked, 1","type":"related"},{"name":"lymphoproliferative syndrome, X-linked, type 1","type":"narrow"}],"termid":"MONDO:0010627","xrefs":{"Monarch":{"xref_id":"0010627"}}}


id: PBO:0067872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 174","termid":"PBO:0067872"}


id: MONDO:0971123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal hemangioblastoma","termid":"MONDO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated retinal racemose hemangioma","secondary_identifiers":["UMLS:C5890449","MEDGEN:1863667","Orphanet:674924"],"termid":"MONDO:0971123","xrefs":{"Monarch":{"xref_id":"0971123"}}}


id: PBO:0051373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-34 (pseudogene)","termid":"PBO:0051373"}


id: PBO:0080783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 3","termid":"PBO:0080783"}


id: PBO:0058149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4444-2","termid":"PBO:0058149"}


id: MONDO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dracunculiasis (obsolete MONDO:0005735)","termid":"MONDO:0005735","xrefs":{"Monarch":{"xref_id":"0005735"}}}


id: PR:Q9Y705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp4 gene.","definition_xrefs":["UniProtKB:Q9Y705","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.15","synonyms":[{"name":"Spom972h-alp4","type":"exact"},{"name":"altered polarity protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y705"}


id: MONDO:0002516
data:
  {"annotated_genes":["SJAG_03453","SJAG_01620","SJAG_02261","SJAG_00980","SJAG_02231","SJAG_02426","SJAG_01082","SJAG_04394","SJAG_02187","SJAG_02049","SJAG_02226","SJAG_04699","SJAG_04206","SJAG_01837","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88317,88318,88323,88321,88322,88324,88319,88320,89199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[87674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"},{"annotations":[88911,88912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[88486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[88209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87486,87487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving any part of the digestive system.","definition_xrefs":["NCIT:C4890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"digestive system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.0","DOID:3119","MEDGEN:148231","ICD10CM:C15-C26","UMLS:C0751075"],"synonyms":[{"name":"GI tumor","type":"broad"},{"name":"GI tumour","type":"broad"},{"name":"cancer of digestive system","type":"exact"},{"name":"digestive system cancer","type":"exact"},{"name":"gastrointestinal system cancer","type":"exact"},{"name":"gastrointestinal tract cancer","type":"exact"},{"name":"malignant digestive system neoplasm","type":"exact"},{"name":"malignant gastrointestinal neoplasm","type":"exact"},{"name":"malignant gastrointestinal system neoplasm","type":"exact"},{"name":"malignant neoplasm of digestive system","type":"exact"}],"termid":"MONDO:0002516","terms_by_termid":{"MONDO:0001056":null,"MONDO:0005575":null,"MONDO:0007256":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0015278":null},"xrefs":{"Monarch":{"xref_id":"0002516"}}}


id: GO:0006171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"cyclic nucleotide biosynthetic process","termid":"GO:0009190"},{"relation_name":"is_a","term_name":"cAMP metabolic process","termid":"GO:0046058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cAMP biosynthetic process","synonyms":[{"name":"3',5' cAMP biosynthesis","type":"exact"},{"name":"3',5' cAMP biosynthetic process","type":"exact"},{"name":"3',5'-cAMP biosynthesis","type":"exact"},{"name":"3',5'-cAMP biosynthetic process","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"cAMP anabolism","type":"exact"},{"name":"cAMP biosynthesis","type":"exact"},{"name":"cAMP formation","type":"exact"},{"name":"cAMP synthesis","type":"exact"},{"name":"cyclic AMP biosynthesis","type":"exact"},{"name":"cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0006171"}


id: GO:0060832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the animal/vegetal axis in the oocyte. The animal/vegetal axis of an oocyte is defined by the placement of the nucleus in the oocyte and can sometimes be identified by the asymmetric placement of other substances such as yolk in the oocyte. The pole of the egg that is closest to the nucleus defines the animal end, with the axis passing through the nucleus.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte animal/vegetal axis specification","termid":"GO:0060832"}


id: PATO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration","secondary_identifiers":["PATO:0000715"],"synonyms":[{"name":"chronic","type":"related"},{"name":"high time","type":"exact"},{"name":"increased period","type":"exact"},{"name":"increased time","type":"exact"},{"name":"prolonged period","type":"related"},{"name":"slow time","type":"related"}],"termid":"PATO:0000498"}


id: PBO:0052955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KxDL motif containing 1","termid":"PBO:0052955"}


id: GO:1902963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GOC:sjp","GO_REF:0000059","PMID:18362153","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902963)","synonyms":[{"name":"down regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"inhibition of metalloendopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"negative regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902963"}


id: MONDO:0006220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the gallbladder. It is composed entirely by malignant squamous epithelial cells.","definition_xrefs":["NCIT:C9170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"gallbladder squamous cell carcinoma","secondary_identifiers":["DOID:5535","EFO:1000267","MEDGEN:83539","UMLS:C0279658"],"synonyms":[{"name":"epidermoid carcinoma of gallbladder","type":"exact"},{"name":"epidermoid carcinoma of the gallbladder","type":"exact"},{"name":"epidermoid gallbladder carcinoma","type":"exact"},{"name":"gall bladder squamous cell carcinoma","type":"exact"},{"name":"gallbladder squamous cell cancer","type":"exact"},{"name":"gallbladder squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of gallbladder","type":"exact"},{"name":"squamous cell carcinoma of the gallbladder","type":"exact"},{"name":"squamous cell gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0006220","xrefs":{"Monarch":{"xref_id":"0006220"}}}


id: FYPO:0000829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cisplatin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to cisplatin","synonyms":[{"name":"resistance to DPP","type":"broad"},{"name":"resistance to cis-DPP","type":"exact"},{"name":"resistance to cisplatin during mitotic cell cycle","type":"related"},{"name":"resistance to cisplatin during vegetative growth","type":"exact"},{"name":"resistant to cisplatin","type":"exact"}],"termid":"FYPO:0000829"}


id: PBO:0067278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 357, pseudogene","termid":"PBO:0067278"}


id: MONDO:0003922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the ovary. It is characterized by the presence of malignant epithelial cells with clear cytoplasm in a fibrotic stroma.","definition_xrefs":["NCIT:C40079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian clear cell cancer","termid":"MONDO:0000548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian clear cell malignant adenofibroma","secondary_identifiers":["MEDGEN:384483","UMLS:C2075522","DOID:6554","ICDO:8313/3"],"synonyms":[{"name":"ovarian clear cell adenocarcinofibroma","type":"exact"},{"name":"ovarian clear cell malignant adenofibroma","type":"exact"}],"termid":"MONDO:0003922","xrefs":{"Monarch":{"xref_id":"0003922"}}}


id: GO:0032817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation","synonyms":[{"name":"regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032817"}


id: GO:0102510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = anthocyanidin 3,5-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102510)","termid":"GO:0102510"}


id: GO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid outer membrane (obsolete GO:0031354)","synonyms":[{"name":"intrinsic to plastid outer membrane","type":"narrow"}],"termid":"GO:0031354"}


id: PBO:0056785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 2","termid":"PBO:0056785"}


id: PBO:0072448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 12","termid":"PBO:0072448"}


id: GO:0015879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"carnitine transport","synonyms":[{"name":"vitamin Bt transport","type":"exact"}],"termid":"GO:0015879"}


id: PBO:0077453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 3","termid":"PBO:0077453"}


id: GO:0032497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a lipopolysaccharide stimulus is received by a cell and converted into a molecular signal. Lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["GOC:add","PMID:15998797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of lipopolysaccharide","synonyms":[{"name":"detection of LPS","type":"exact"}],"termid":"GO:0032497"}


id: GO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbut-2-enoyl-CoA + ATP + bicarbonate = trans-3-methylglutaconyl-CoA + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:13589","EC:6.4.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylcrotonoyl-CoA carboxylase activity","secondary_identifiers":["KEGG_REACTION:R04138","Reactome:R-HSA-508308","MetaCyc:METHYLCROTONYL-COA-CARBOXYLASE-RXN","Reactome:R-HSA-9909466","Reactome:R-HSA-70773"],"synonyms":[{"name":"3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"MCCC activity","type":"exact"},{"name":"beta-methylcrotonyl CoA carboxylase activity","type":"related"},{"name":"beta-methylcrotonyl coenzyme A carboxylase activity","type":"related"},{"name":"beta-methylcrotonyl-CoA carboxylase activity","type":"related"},{"name":"methylcrotonyl coenzyme A carboxylase activity","type":"related"},{"name":"methylcrotonyl-CoA carboxylase activity","type":"related"}],"termid":"GO:0004485"}


id: MONDO:0036915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the ovary and is characterized by the presence of neoplastic epithelium that resembles the epithelium of the endocervix or gastrointestinal tract. It includes mucinous adenofibroma, mucinous cystadenofibroma, and mucinous cystadenoma.","definition_xrefs":["NCIT:C40039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian mucinous tumor","secondary_identifiers":["UMLS:C1511100","MEDGEN:267038"],"synonyms":[{"name":"benign ovarian mucinous neoplasm","type":"exact"},{"name":"benign ovarian mucinous tumor","type":"exact"},{"name":"ovarian mucinous neoplasm, benign","type":"exact"}],"termid":"MONDO:0036915","xrefs":{"Monarch":{"xref_id":"0036915"}}}


id: MONDO:0008819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteriosclerosis, severe juvenile","secondary_identifiers":["MEDGEN:395330","OMIM:208060","MESH:C565941","UMLS:C1859725"],"synonyms":[{"name":"arteriosclerosis, severe juvenile","type":"exact"}],"termid":"MONDO:0008819","xrefs":{"Monarch":{"xref_id":"0008819"}}}


id: PBO:0061003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS actin remodeling regulator","termid":"PBO:0061003"}


id: MONDO:0957250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 83","secondary_identifiers":["DOID:0070582","MEDGEN:1841106","UMLS:C5830470","OMIM:620354"],"termid":"MONDO:0957250","xrefs":{"Monarch":{"xref_id":"0957250"}}}


id: GO:0071276
data:
  {"annotated_genes":["SJAG_00044","SJAG_04516","SJAG_02599","SJAG_03497","SJAG_00988","SJAG_01351","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90756],"is_not":false,"summary":null,"term":"GO:0071276"},{"annotations":[120241,72609,110411,98935,95199,98973],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cadmium ion","termid":"GO:0046686"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cadmium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to cadmium","type":"exact"}],"termid":"GO:0071276","terms_by_termid":{"GO:0071276":null,"GO:0098849":null}}


id: GO:0106309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + progesterone + reduced [NADPH--hemoprotein reductase] = 21-hydroxyprogesterone + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:25855791","RHEA:50304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"progesterone 21-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-193964","Reactome:R-HSA-193981"],"termid":"GO:0106309"}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: PBO:0029447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate-ammonia_ligase_activity","termid":"PBO:0029447"}


id: PBO:0069296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 552, pseudogene","termid":"PBO:0069296"}


id: GO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye morphogenesis","secondary_identifiers":["GO:0048595","GO:0048594"],"synonyms":[{"name":"camera-style eye morphogenesis","type":"exact"}],"termid":"GO:0048593"}


id: PBO:0108537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein ortholog","termid":"PBO:0108537"}


id: GO:0071546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL2-TDRD1 module, a set of proteins that act in the primary piRNA pathway. The pi-body corresponds to the cementing material between mitochondria found in gonocytes.","definition_xrefs":["GOC:sp","PMID:20011505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pi-body","synonyms":[{"name":"intermitochondrial cement","type":"exact"}],"termid":"GO:0071546"}


id: GO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.","definition_xrefs":["PMID:7878057","GOC:mah","GOC:isa_complete","PMID:14570049","PMID:9126736"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, docking (obsolete GO:0000059)","synonyms":[{"name":"protein docking during protein import into nucleus","type":"exact"},{"name":"protein docking during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein docking during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, docking","type":"exact"},{"name":"protein-nucleus import, docking","type":"exact"}],"termid":"GO:0000059"}


id: PBO:0050174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 30","termid":"PBO:0050174"}


id: GO:0031965
data:
  {"annotated_genes":["SJAG_01374","SJAG_01422","SJAG_03299","SJAG_00790","SJAG_01460","SJAG_02425","SJAG_01737","SJAG_03715","SJAG_01356","SJAG_03783","SJAG_03892","SJAG_01745","SJAG_00680","SJAG_00054","SJAG_03657","SJAG_05196","SJAG_01263","SJAG_03837","SJAG_05226","SJAG_02885","SJAG_00810","SJAG_03251","SJAG_03449","SJAG_03491","SJAG_00471","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60932,68434,78331,90878,91303,91384,92828,93401,93836,94987,98637,105403,111576,112849,116920,121577,121579],"is_not":false,"summary":null,"term":"GO:0031965"},{"annotations":[79648,95731,105354,72009,104762,120208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005637"},{"annotations":[77833,119587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"},{"annotations":[90396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"}]},"cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:mah","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00471":null,"SJAG_00680":null,"SJAG_00790":null,"SJAG_00810":null,"SJAG_01263":null,"SJAG_01356":null,"SJAG_01374":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01538":null,"SJAG_01737":null,"SJAG_01745":null,"SJAG_02425":null,"SJAG_02885":null,"SJAG_03251":null,"SJAG_03299":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_03715":null,"SJAG_03783":null,"SJAG_03837":null,"SJAG_03892":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao1687101204"],"termid":"GO:0031965","terms_by_termid":{"GO:0000093":null,"GO:0005637":null,"GO:0005640":null,"GO:0031965":null,"GO:1990862":null}}


id: PBO:0080717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and SOCS box containing 1","termid":"PBO:0080717"}


id: PBO:0005308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx12 (predicted)","termid":"PBO:0005308"}


id: GO:0031330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular catabolic process (obsolete GO:0031330)","synonyms":[{"name":"down regulation of cellular catabolic process","type":"exact"},{"name":"down-regulation of cellular catabolic process","type":"exact"},{"name":"downregulation of cellular catabolic process","type":"exact"},{"name":"inhibition of cellular catabolic process","type":"narrow"},{"name":"negative regulation of cellular breakdown","type":"exact"},{"name":"negative regulation of cellular catabolism","type":"exact"},{"name":"negative regulation of cellular degradation","type":"exact"}],"termid":"GO:0031330"}


id: FYPO:0005955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the entire mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle","synonyms":[{"name":"increased duration of mitotic cell cycle during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005955"}


id: PBO:0071125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 127","termid":"PBO:0071125"}


id: PBO:0044987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 38","termid":"PBO:0044987"}


id: PBO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn501","termid":"PBO:0000874"}


id: PBO:0005363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG ortholog Alp14","termid":"PBO:0005363"}


id: GO:0075042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of turgor in appressorium (obsolete GO:0075042)","termid":"GO:0075042"}


id: GO:1901768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbapenem.","definition_xrefs":["PMID:9402024","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"carbapenem catabolic process","synonyms":[{"name":"carbapenem breakdown","type":"exact"},{"name":"carbapenem catabolism","type":"exact"},{"name":"carbapenem degradation","type":"exact"}],"termid":"GO:1901768"}


id: MONDO:0006978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Insufficiency of arterial or venous blood supply to the spleen due to emboli, thrombi, vascular torsion, or pressure that produces a macroscopic area of necrosis. (From Stedman, 25th ed)","definition_xrefs":["MESH:D013159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"splenic infarction","secondary_identifiers":["MEDGEN:52468","ICD10CM:D73.5","EFO:1001190","ICD9:289.59","SCTID:22996003","MedDRA:10041648","DOID:2533","UMLS:C0037998"],"synonyms":[{"name":"infarct of the spleen","type":"related"},{"name":"splenic infarct","type":"exact"},{"name":"splenic infarction","type":"exact"},{"name":"splenic infarcts","type":"related"}],"termid":"MONDO:0006978","xrefs":{"Monarch":{"xref_id":"0006978"}}}


id: FYPO:0005355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005355"}


id: GO:1904864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:TermGenie","PMID:18936100","GOC:bf","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"negatively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"down regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"down regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"down regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"down regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"down regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"down regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"down regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"down regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"down-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"down-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"down-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"down-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"down-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"down-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"down-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"down-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"downregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"downregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"downregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"downregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"downregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"downregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"downregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"downregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"inhibition of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"inhibition of beta-catenin-TCF complex formation","type":"narrow"},{"name":"inhibition of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"inhibition of beta-catenin/LEF complex formation","type":"narrow"},{"name":"inhibition of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"inhibition of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"inhibition of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"inhibition of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"negative regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"negative regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"negative regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"negative regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"negative regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"negative regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"negative regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904864"}


id: PBO:0113178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Killer toxin defense factor; key polymorphic factor in the defense against K28 toxin; localizes mainly to vacuolar membrane; most likely acts against K28 during its trafficking after endocytosis; member of DUP240 gene family","termid":"PBO:0113178"}


id: GO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"response to prostaglandin D","termid":"GO:0071798"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin D stimulus","termid":"GO:0071799"}


id: MONDO:0005775
data:
  {"annotated_genes":["SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"}]},"cv_name":"mondo","definition":"An X-linked genetic condition caused by alterations in the gene G6PD that result in moderately to severely decreased activity levels of the enzyme glucose-6-phosphate dehydrogenase. Most individuals with G6PD deficiency are asymptomatic throughout their life. Individuals with G6PD variants that cause G6PD deficiency are at risk for severe neonatal jaundice. These individuals are also at risk for acute hemolytic anemia in response to certain medication exposures, chemical exposures, infections, or consumption of fava beans.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"G6PD deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200627","NCIT:C98933","UMLS:C2939465","MEDGEN:473706","DOID:2862","EFO:0007287","SCTID:62403005","MESH:D005955"],"synonyms":[{"name":"G-6-PD variant enzyme deficiency Anaemia","type":"exact"},{"name":"G-6-PD variant enzyme deficiency Anemia","type":"exact"},{"name":"G6PD","type":"exact"},{"name":"G6PD deficiency","type":"exact"},{"name":"deficiency of G-6PD","type":"exact"},{"name":"glucose-6-phosphate dehydrogenase deficiency","type":"exact"},{"name":"glucosephosphate dehydrogenase deficiency","type":"exact"},{"name":"inborn error of glucose-6-phosphate dehydrogenase activity","type":"exact"},{"name":"inborn glucose-6-phosphate dehydrogenase activity disorder","type":"exact"},{"name":"rare inborn error of glucose-6-phosphate dehydrogenase activity","type":"exact"}],"termid":"MONDO:0005775","terms_by_termid":{"MONDO:0010480":null},"xrefs":{"Monarch":{"xref_id":"0005775"}}}


id: PBO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Hri1","termid":"PBO:0002703"}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["RHEA:21444","EC:1.3.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["KEGG_REACTION:R03709","MetaCyc:COUMARATE-REDUCTASE-RXN"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: PBO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036024"}


id: PBO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 1 pseudogene","termid":"PBO:0062049"}


id: GO:1902175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:11672522","GOC:TermGenie","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902175"}


id: PR:000059625
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner kinetochore subunit cnp20 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-3, Thr-8, Ser-12, Ser-13, Ser-14, Thr-21, Ser-23, Thr-29, Ser-31, Ser-33, Thr-36, Ser-39, Thr-43, and Thr-45 of the amino acid sequence represented by UniProtKB:Q9HGK9. Example: UniProtKB:Q9HGK9, Ser-3/Ser-12/Ser-13/Ser-14/Ser-23/Ser-31/Ser-33/Ser-39, MOD:00046|Thr-8/Thr-21/Thr-29/Thr-36/Thr-43/Thr-45, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:34810257","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cnp20/Phos-CIM","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Cnp20/Phos-CIM","type":"exact"},{"name":"PomBase_original_PRO_term_name: inner kinetochore subunit cnp20 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp20/Phos:1","type":"exact"},{"name":"UniProtKB:Q9HGK9, Ser-3/Ser-12/Ser-13/Ser-14/Ser-23/Ser-31/Ser-33/Ser-39, MOD:00046|Thr-8/Thr-21/Thr-29/Thr-36/Thr-43/Thr-45, MOD:00047","type":"narrow"}],"termid":"PR:000059625"}


id: FYPO:0000881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000881"}


id: MONDO:0006590
data:
  {"annotated_genes":["SJAG_01938","SJAG_02488","SJAG_05011","SJAG_04565","SJAG_01878","SJAG_00104","SJAG_02698","SJAG_03158"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[87856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[87565,87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[88577,88579,88578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","definition":"A group of autosomal dominant, autosomal recessive, X-linked inherited or acquired disorders characterized by the thickening of the palms and soles due to hyperkeratosis.","definition_xrefs":["NCIT:C34748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_04565":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0022596","EFO:1000745","ICD9:757.39","SCTID:706885006","DOID:3390","MEDGEN:44017"],"synonyms":[{"name":"keratoderma, palmoplantar","type":"related"},{"name":"keratosis palmaris et plantaris","type":"exact"},{"name":"palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0006590","terms_by_termid":{"MONDO:0007858":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0014131":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006590"}}}


id: GO:1903161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any pantothenate transmembrane transporter activity that is involved in pantothenate import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete pantothenate transmembrane transporter activity involved in pantothenate import into cell (obsolete GO:1903161)","synonyms":[{"name":"pantothenate transmembrane transporter activity involved in pantothenate import into cell","type":"exact"},{"name":"vitamin B5 transmembrane transporter activity involved in pantothenate import into cell","type":"exact"}],"termid":"GO:1903161"}


id: GO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"part_of","term_name":"mesonephric glomerular parietal epithelial cell differentiation","termid":"GO:0061253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular parietal epithelial cell development","termid":"GO:0061254"}


id: PBO:0056732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 1","termid":"PBO:0056732"}


id: PR:O14232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superkiller viralicidic activity 2-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00545","PANTHER:PTHR11752:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mtr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.16c","secondary_identifiers":["UniProtKB:O14232"],"synonyms":[{"name":"Spom972h-SKIV2L2","type":"exact"}],"termid":"PR:O14232"}


id: MONDO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia australis, which is transmitted by ticks (Ixodes holocyclus). The infection has symptom fever, has symptom headache, has symptom myalgia, has symptom maculopapular rash, and has symptom lymphadenopathy.","definition_xrefs":["DOID:10784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Queensland tick typhus","secondary_identifiers":["MEDGEN:755996","ICD9:082.3","SCTID:68981009","UMLS:C2979888"],"synonyms":[{"name":"Australian tick typhus","type":"related"},{"name":"North Queensland tick typhus","type":"related"},{"name":"Rickettsia australis spotted fever","type":"exact"}],"termid":"MONDO:0001118","xrefs":{"Monarch":{"xref_id":"0001118"}}}


id: PBO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein L-glutamate O-methyltransferase, implicated in DNA damage response","termid":"PBO:0036521"}


id: PBO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 4 pseudogene","termid":"PBO:0062154"}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: PBO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component Ecm29","termid":"PBO:0002672"}


id: FYPO:0004461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of sexual differentiation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Sexual differentiation RNAs are transcribed from genes whose products are involved in sexual differentiation, i.e. mating and sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of regulation of sexual differentiation gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased level of sexual differentiation regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased regulation of sexual differentiation gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of sexual differentiation gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004461"}


id: GO:1904397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuromuscular junction development","synonyms":[{"name":"down regulation of NMJ stability","type":"related"},{"name":"down regulation of neuromuscular junction development","type":"exact"},{"name":"down regulation of neuromuscular junction organization","type":"exact"},{"name":"down regulation of neuromuscular junction stability","type":"related"},{"name":"down-regulation of NMJ stability","type":"related"},{"name":"down-regulation of neuromuscular junction development","type":"exact"},{"name":"down-regulation of neuromuscular junction organization","type":"exact"},{"name":"down-regulation of neuromuscular junction stability","type":"related"},{"name":"downregulation of NMJ stability","type":"related"},{"name":"downregulation of neuromuscular junction development","type":"exact"},{"name":"downregulation of neuromuscular junction organization","type":"exact"},{"name":"downregulation of neuromuscular junction stability","type":"related"},{"name":"inhibition of NMJ stability","type":"related"},{"name":"inhibition of neuromuscular junction development","type":"narrow"},{"name":"inhibition of neuromuscular junction organization","type":"narrow"},{"name":"inhibition of neuromuscular junction stability","type":"related"},{"name":"negative regulation of NMJ stability","type":"related"},{"name":"negative regulation of neuromuscular junction organization","type":"exact"},{"name":"negative regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904397"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: PBO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti2 (predicted)","termid":"PBO:0002495"}


id: PBO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 10","termid":"PBO:0070780"}


id: SO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified serine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_serine","secondary_identifiers":["MOD:00916"],"synonyms":[{"name":"MosSer","type":"exact"},{"name":"modified L serine","type":"exact"},{"name":"modified L-serine","type":"exact"}],"termid":"SO:0001399"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: MONDO:0030916
data:
  {"annotated_genes":["SJAG_04179","SJAG_02920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86950,86951],"is_not":false,"summary":null,"term":"MONDO:0030916"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02920":null,"SJAG_04179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080233","UMLS:C4540470","MEDGEN:1616989","OMIM:617787"],"synonyms":[{"name":"MRD50","type":"related"},{"name":"autosomal dominant intellectual disability 50","type":"related"},{"name":"autosomal dominant mental retardation 50","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 50, with behavioral abnormalities","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 50, with behavioural abnormalities","type":"exact"},{"name":"intellectual disability, autosomal dominant 50","type":"exact"},{"name":"mental retardation, autosomal dominant 50","type":"related"}],"termid":"MONDO:0030916","terms_by_termid":{"MONDO:0030916":null},"xrefs":{"Monarch":{"xref_id":"0030916"}}}


id: PBO:0073931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 4","termid":"PBO:0073931"}


id: MONDO:0012856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Birk-Barel syndrome is an inherited condition characterized by intellectual disability, hypotonia, hyperactivity, and unusual facial features. The condition is caused by mutations in the KCNK9 gene on chromosome 8. This condition demonstrates dominant inheritance with paternal imprinting, which means that a mutation in the maternal gene will result in disease, but a mutation in the paternal gene will have no effect (imprinted with paternal silencing).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birk-Barel syndrome","secondary_identifiers":["GARD:10358","UMLS:C2676770","MEDGEN:393583","OMIM:612292","SCTID:764861005","NORD:1896","Orphanet:166108","MESH:C567357","DOID:0050675"],"synonyms":[{"name":"BIRK-Barel intellectual disability dysmorphism syndrome","type":"exact"},{"name":"BIRK-Barel mental retardation dysmorphism syndrome","type":"exact"},{"name":"Birk Barel intellectual disability dysmorphism syndrome","type":"related"},{"name":"Birk Barel mental retardation dysmorphism syndrome","type":"related"},{"name":"Birk-Barel syndrome","type":"exact"},{"name":"KCNK9 Imprinting Syndrome","type":"exact"},{"name":"intellectual disability with hypotonia and Facial Dysmorphism","type":"related"},{"name":"intellectual disability, Birk-Barel type","type":"related"},{"name":"intellectual disability-hypotonia-facial dysmorphism syndrome","type":"exact"},{"name":"mental retardation with hypotonia and Facial Dysmorphism","type":"related"}],"termid":"MONDO:0012856","xrefs":{"Monarch":{"xref_id":"0012856"}}}


id: MONDO:0016634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare thrombotic disorder due to a coagulation factors defect that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete thrombotic disorder due to an acquired coagulation factors defect (obsolete MONDO:0016634)","secondary_identifiers":["Orphanet:248365"],"synonyms":[{"name":"acquired rare thrombotic disorder due to a coagulation factors defect","type":"exact"}],"termid":"MONDO:0016634","xrefs":{"Monarch":{"xref_id":"0016634"}}}


id: MONDO:0033170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"statin toxicity","secondary_identifiers":["Orphanet:413696"],"termid":"MONDO:0033170","xrefs":{"Monarch":{"xref_id":"0033170"}}}


id: GO:0045732
data:
  {"annotated_genes":["SJAG_01131","SJAG_00642","SJAG_01544","SJAG_03048","SJAG_03699","SJAG_00766","SJAG_01210","SJAG_01489","SJAG_00712","SJAG_02723","SJAG_00071","SJAG_04477","SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[66674,68345,62199,68852,69836,70350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[119102,113715,104330,108630,110882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:2000600","GO:1903364"],"synonyms":[{"name":"activation of cellular protein breakdown","type":"narrow"},{"name":"activation of cellular protein catabolic process","type":"narrow"},{"name":"activation of cellular protein catabolism","type":"narrow"},{"name":"activation of cellular protein degradation","type":"narrow"},{"name":"activation of protein catabolic process","type":"narrow"},{"name":"positive regulation of cellular protein breakdown","type":"exact"},{"name":"positive regulation of cellular protein catabolic process","type":"exact"},{"name":"positive regulation of cellular protein catabolism","type":"exact"},{"name":"positive regulation of cellular protein degradation","type":"exact"},{"name":"positive regulation of cyclin breakdown","type":"narrow"},{"name":"positive regulation of cyclin catabolic process","type":"narrow"},{"name":"positive regulation of cyclin catabolism","type":"narrow"},{"name":"positive regulation of cyclin degradation","type":"narrow"},{"name":"positive regulation of degradation of cyclin","type":"narrow"},{"name":"positive regulation of protein breakdown","type":"exact"},{"name":"positive regulation of protein catabolism","type":"exact"},{"name":"positive regulation of protein degradation","type":"exact"},{"name":"stimulation of protein catabolic process","type":"narrow"},{"name":"up regulation of cellular protein breakdown","type":"exact"},{"name":"up regulation of cellular protein catabolic process","type":"exact"},{"name":"up regulation of cellular protein catabolism","type":"exact"},{"name":"up regulation of cellular protein degradation","type":"exact"},{"name":"up regulation of protein catabolic process","type":"exact"},{"name":"up-regulation of cellular protein breakdown","type":"exact"},{"name":"up-regulation of cellular protein catabolic process","type":"exact"},{"name":"up-regulation of cellular protein catabolism","type":"exact"},{"name":"up-regulation of cellular protein degradation","type":"exact"},{"name":"up-regulation of protein catabolic process","type":"exact"},{"name":"upregulation of cellular protein breakdown","type":"exact"},{"name":"upregulation of cellular protein catabolic process","type":"exact"},{"name":"upregulation of cellular protein catabolism","type":"exact"},{"name":"upregulation of cellular protein degradation","type":"exact"},{"name":"upregulation of protein catabolic process","type":"exact"}],"termid":"GO:0045732","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1904352":null,"GO:1905786":null}}


id: PBO:0066615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 1","termid":"PBO:0066615"}


id: GO:1901382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"}


id: PBO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 4","termid":"PBO:0046009"}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: PATO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's liking a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preference","termid":"PATO:0000773"}


id: MONDO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleomorphic rhabdomyosarcoma (obsolete MONDO:0002573)","termid":"MONDO:0002573","xrefs":{"Monarch":{"xref_id":"0002573"}}}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0051179","GO:0006605","GO:0006810"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: _global:parasite_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"},{"relation_name":"is_a","term_name":"interacts_with_via_parasite-host_interaction","termid":"_global:interacts_with_via_parasite-host_interaction"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasite_of","secondary_identifiers":["RO:0002444"],"synonyms":[{"name":"direct parasite of","type":"exact"}],"termid":"_global:parasite_of"}


id: GO:0032833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032830"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0032832"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"down regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"down-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"downregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"inhibition of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"narrow"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0032833"}


id: FYPO:0001156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells cause the pH of their growth medium to decrease by a greater amount than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased pH of growth medium","synonyms":[{"name":"decreased pH level of growth medium","type":"exact"},{"name":"increased growth medium acidification","type":"exact"},{"name":"reduced pH of growth medium","type":"exact"}],"termid":"FYPO:0001156"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: PBO:0070264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U105B small nucleolar","termid":"PBO:0070264"}


id: MONDO:0013286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any common variable immunodeficiency in which the cause of the disease is a mutation in the CD81 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 6","secondary_identifiers":["GARD:15671","UMLS:C3150741","MEDGEN:462091","OMIM:613496","DOID:0081149"],"synonyms":[{"name":"CD81 common variable immunodeficiency","type":"exact"},{"name":"CVID6","type":"related"},{"name":"antibody deficiency due to CD81 defect","type":"related"},{"name":"common variable immunodeficiency caused by mutation in CD81","type":"exact"},{"name":"immunodeficiency, common variable, 6","type":"exact"},{"name":"immunodeficiency, common variable, type 6","type":"exact"}],"termid":"MONDO:0013286","xrefs":{"Monarch":{"xref_id":"0013286"}}}


id: GO:0071316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nicotine","termid":"GO:0035094"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nicotine","termid":"GO:0071316"}


id: PBO:0050057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, X (pseudogene)","termid":"PBO:0050057"}


id: PATO:0001164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the bearer's exhibiting density.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dense","termid":"PATO:0001164"}


id: PBO:0071139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 2","termid":"PBO:0071139"}


id: PBO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotically Upregulated Gene","termid":"PBO:0000310"}


id: GO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002587"}


id: PR:Q9C0Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe3 gene.","definition_xrefs":["UniProtKB:Q9C0Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB24D3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.01","synonyms":[{"name":"Spom972h-toe3","type":"exact"}],"termid":"PR:Q9C0Z1"}


id: GO:0035434
data:
  {"annotated_genes":["SJAG_01493","SJAG_04246","SJAG_04743","SJAG_03079","SJAG_02399","SJAG_00547","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62980,69420,105734],"is_not":false,"summary":null,"term":"GO:0035434"},{"annotations":[109827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[89806,116608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[103430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper cation across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"copper ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1901473"],"synonyms":[{"name":"copper cation transmembrane transport","type":"exact"},{"name":"copper ion membrane transport","type":"exact"}],"termid":"GO:0035434","terms_by_termid":{"GO:0035434":null,"GO:0060003":null,"GO:0097430":null,"GO:0098705":null}}


id: PBO:0052450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 3 pseudogene 1","termid":"PBO:0052450"}


id: GO:0008899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + succinyl-CoA = O-succinyl-L-homoserine + CoA.","definition_xrefs":["RHEA:22008","EC:2.3.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-succinyltransferase activity","termid":"GO:0016750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"homoserine O-succinyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01777","MetaCyc:HOMSUCTRAN-RXN"],"synonyms":[{"name":"homoserine O-transsuccinylase activity","type":"broad"},{"name":"homoserine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-homoserine O-succinyltransferase activity","type":"related"}],"termid":"GO:0008899"}


id: PBO:0029953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_secretion","termid":"PBO:0029953"}


id: PBO:0038568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 2","termid":"PBO:0038568"}


id: PBO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin complex subunit Pds5","termid":"PBO:0034721"}


id: PBO:0028487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0028487"}


id: MONDO:0008187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 1","secondary_identifiers":["MEDGEN:401493","OMIM:167870","UMLS:C1868649"],"synonyms":[{"name":"PAND1","type":"exact"},{"name":"panic disorder","type":"related"},{"name":"panic disorder 1","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 13Q-related","type":"related"},{"name":"panic disorder syndrome 1","type":"exact"},{"name":"panic disorder with Joint laxity","type":"related"},{"name":"panic disorder with bladder conditions","type":"related"},{"name":"panic disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008187","xrefs":{"Monarch":{"xref_id":"0008187"}}}


id: PBO:0063459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA divergent transcript","termid":"PBO:0063459"}


id: PBO:0004633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase (predicted)","termid":"PBO:0004633"}


id: PBO:0068011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 315","termid":"PBO:0068011"}


id: PBO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_branching_relationship_with","termid":"PBO:0034099"}


id: MONDO:0009347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial lipochrome histiocytosis","secondary_identifiers":["MEDGEN:90743","SCTID:234577004","MESH:C562738","UMLS:C0334125","OMIM:235900"],"synonyms":[{"name":"histiocytosis, familial lipochrome","type":"related"}],"termid":"MONDO:0009347","xrefs":{"Monarch":{"xref_id":"0009347"}}}


id: GO:0008395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of a hydroxyl group on a steroid by incorporation of oxygen from O2.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-6785244","Reactome:R-HSA-193393","Reactome:R-HSA-193143","Reactome:R-HSA-193787","Reactome:R-HSA-193995","Reactome:R-HSA-191999","Reactome:R-HSA-9035960","Reactome:R-HSA-6785245","Reactome:R-HSA-192042","GO:0008394","Reactome:R-HSA-191983","Reactome:R-HSA-193060","Reactome:R-HSA-192054","Reactome:R-HSA-193737","Reactome:R-HSA-193780","Reactome:R-HSA-192123","Reactome:R-HSA-193460","Reactome:R-HSA-193713","Reactome:R-HSA-193965","Reactome:R-HSA-193719","Reactome:R-HSA-193792","Reactome:R-HSA-5601849","Reactome:R-HSA-5602170","Reactome:R-HSA-9758674","Reactome:R-HSA-193497"],"synonyms":[{"name":"cytochrome P450 CYP2G1","type":"narrow"},{"name":"olfactory-specific steroid hydroxylase activity","type":"narrow"},{"name":"steroid monooxygenase activity","type":"exact"}],"termid":"GO:0008395"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: GO:2001200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"is_a","term_name":"regulation of dendritic cell differentiation","termid":"GO:2001198"},{"relation_name":"positively_regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell differentiation","termid":"GO:2001200"}


id: PBO:0076093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stum, mechanosensory transduction mediator homolog","termid":"PBO:0076093"}


id: PBO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.14","termid":"PBO:0000867"}


id: PBO:0080138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VASH1 antisense RNA 1","termid":"PBO:0080138"}


id: PBO:0088355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21","termid":"PBO:0088355"}


id: PBO:0040911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 15","termid":"PBO:0040911"}


id: PBO:0076311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNJ2 intronic transcript 1","termid":"PBO:0076311"}


id: PBO:0045396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 3","termid":"PBO:0045396"}


id: MONDO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the prominence of fibrotic changes in the parenchyma.","definition_xrefs":["NCIT:C3660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"non-proliferative fibrocystic change of the breast","termid":"MONDO:0003724"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibrosis","secondary_identifiers":["MEDGEN:57627","DOID:10353","UMLS:C0156318","SCTID:29070004","EFO:1000145","ICD10CM:N60.3","ICD9:610.3"],"synonyms":[{"name":"breast fibrosclerosis","type":"exact"},{"name":"breast fibrosis","type":"exact"},{"name":"fibrosclerosis of breast","type":"exact"},{"name":"fibrosclerosis of the breast","type":"exact"},{"name":"fibrosis of breast","type":"exact"},{"name":"fibrosis of the breast","type":"exact"}],"termid":"MONDO:0006118","xrefs":{"Monarch":{"xref_id":"0006118"}}}


id: MONDO:0006330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare soft tissue tumor of uncertain lineage characterized by the presence of neoplastic spindle to round cells forming cords in a fibromyxoid stroma. The lesions are associated with the formation of metaplastic bone. Most patients present with painless subcutaneous masses. Recurrences have been reported in a minority of patients.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"},{"relation_name":"is_a","term_name":"fibromyxoid tumor","termid":"MONDO:0037745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossifying fibromyxoid tumor","secondary_identifiers":["MEDGEN:226846","EFO:1000408","ICDO:8842/0","NCIT:C6582","SCTID:404076001","DOID:2685","UMLS:C1266128","ONCOTREE:OFMT"],"synonyms":[{"name":"OFMT","type":"exact"},{"name":"ossifying fibromyxoid neoplasm","type":"exact"},{"name":"ossifying fibromyxoid tumor (morphologic abnormality)","type":"exact"},{"name":"ossifying fibromyxoid tumour (morphologic abnormality)","type":"exact"},{"name":"ossifying fibromyxoma","type":"exact"}],"termid":"MONDO:0006330","xrefs":{"Monarch":{"xref_id":"0006330"}}}


id: MONDO:1011486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complement component 2 deficiency that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 2 deficiency, non-human animal","termid":"MONDO:1011424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 2 deficiency, domestic guinea pig","secondary_identifiers":["OMIA:001625-10141"],"synonyms":[{"name":"C2 deficiency, domestic guinea pig","type":"exact"}],"termid":"MONDO:1011486","xrefs":{"Monarch":{"xref_id":"1011486"}}}


id: PBO:0081586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 513","termid":"PBO:0081586"}


id: PBO:0082725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ribosome quality control complex (RQC); RQC (Rqc1p-Rkr1p-Rqc2p-Cdc48p-Npl4p-Ufd1p) is a ribosome-bound complex required for the degradation of polypeptides arising from stalled translation; required along with Rkr1p for recruitment of the Cdc48p-Npl4p-Ufd1p AAA ATPase complex to the RQC","termid":"PBO:0082725"}


id: MONDO:0032890
data:
  {"annotated_genes":["SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88666],"is_not":false,"summary":null,"term":"MONDO:0032890"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01315":null},"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disease and ocular or auditory anomalies with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618733","UMLS:C5231483","MEDGEN:1684689"],"synonyms":[{"name":"NEUROMUSCULAR DISEASE AND OCULAR OR AUDITORY ANOMALIES WITH OR WITHOUT SEIZURES","type":"related"},{"name":"NMOAS","type":"related"}],"termid":"MONDO:0032890","terms_by_termid":{"MONDO:0032890":null},"xrefs":{"Monarch":{"xref_id":"0032890"}}}


id: PBO:0087904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon; PDR8 has a paralog, YRR1, that arose from the whole genome duplication","termid":"PBO:0087904"}


id: PBO:0048739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 1","termid":"PBO:0048739"}


id: MONDO:0957544
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88199],"is_not":false,"summary":null,"term":"MONDO:0957544"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841300","OMIM:620458","UMLS:C5830664"],"termid":"MONDO:0957544","terms_by_termid":{"MONDO:0957544":null},"xrefs":{"Monarch":{"xref_id":"0957544"}}}


id: MONDO:1011587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porphyria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria, domestic cat","secondary_identifiers":["OMIA:000815-9685"],"termid":"MONDO:1011587","xrefs":{"Monarch":{"xref_id":"1011587"}}}


id: PBO:0005490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1-like membrane protein","termid":"PBO:0005490"}


id: PBO:0013098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear import protein Rtp1 (predicted)","termid":"PBO:0013098"}


id: PBO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1","termid":"PBO:0048746"}


id: MONDO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exostoses, multiple in which the cause of the disease is a mutation in the EXT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary multiple osteochondromas","termid":"MONDO:0005508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses, multiple, type 1","secondary_identifiers":["GARD:2204","OMIM:133700"],"synonyms":[{"name":"EXT","type":"related"},{"name":"EXT1 exostoses, multiple","type":"exact"},{"name":"diaphyseal Aclasis","type":"related"},{"name":"exostoses, multiple caused by mutation in EXT1","type":"exact"},{"name":"exostoses, multiple, type 1","type":"exact"},{"name":"exostoses, multiple, type I","type":"related"},{"name":"multiple cartilaginous exostoses","type":"related"},{"name":"multiple osteochondromas","type":"related"},{"name":"osteochondromatosis","type":"related"}],"termid":"MONDO:0007585","xrefs":{"Monarch":{"xref_id":"0007585"}}}


id: PBO:0069222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 477, pseudogene","termid":"PBO:0069222"}


id: PBO:0073752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 7","termid":"PBO:0073752"}


id: MONDO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the ethmoid sinus. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C4416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoidal sinus neoplasm","secondary_identifiers":["MEDGEN:83386","UMLS:C0345668","DOID:1364","MONDO:0021215","SCTID:126677000"],"synonyms":[{"name":"ethmoid sinus neoplasm","type":"exact"},{"name":"ethmoid sinus neoplasm (disease)","type":"exact"},{"name":"ethmoid sinus tumor","type":"exact"},{"name":"ethmoid sinus tumour","type":"exact"},{"name":"ethmoidal sinus neoplasm","type":"exact"},{"name":"ethmoidal sinus tumor","type":"exact"},{"name":"ethmoidal sinus tumour","type":"exact"},{"name":"neoplasm of ethmoid sinus","type":"exact"},{"name":"neoplasm of ethmoidal sinus","type":"exact"},{"name":"neoplasm of the ethmoid sinus","type":"exact"},{"name":"neoplasm of the ethmoidal sinus","type":"exact"},{"name":"tumor of ethmoid sinus","type":"exact"},{"name":"tumor of ethmoidal sinus","type":"exact"},{"name":"tumor of the ethmoid sinus","type":"exact"},{"name":"tumor of the ethmoidal sinus","type":"exact"},{"name":"tumour of ethmoid sinus","type":"exact"},{"name":"tumour of ethmoidal sinus","type":"exact"},{"name":"tumour of the ethmoid sinus","type":"exact"},{"name":"tumour of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0001764","xrefs":{"Monarch":{"xref_id":"0001764"}}}


id: MONDO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation-related bone disorder (obsolete MONDO:0018292)","secondary_identifiers":["Orphanet:371195"],"synonyms":[{"name":"CDG-related bone disorder","type":"exact"}],"termid":"MONDO:0018292","xrefs":{"Monarch":{"xref_id":"0018292"}}}


id: MONDO:0016616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oligoarticular juvenile idiopathic arthritis","termid":"MONDO:0019433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligoarticular juvenile idiopathic arthritis without anti-nuclear antibodies","secondary_identifiers":["ICD10CM:M08.4","Orphanet:247846"],"synonyms":[{"name":"oligoarticular JIA without anti-nuclear antibodies","type":"exact"},{"name":"pauciarticular chronic arthritis without anti-nuclear antibodies","type":"exact"}],"termid":"MONDO:0016616","xrefs":{"Monarch":{"xref_id":"0016616"}}}


id: PBO:0057151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 299","termid":"PBO:0057151"}


id: GO:0047524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-alpha-hydroxysteroid = 16-beta-hydroxysteroid.","definition_xrefs":["RHEA:15829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"16-hydroxysteroid epimerase activity","secondary_identifiers":["MetaCyc:16-HYDROXYSTEROID-EPIMERASE-RXN","EC:5.1.99.2"],"synonyms":[{"name":"16-hydroxysteroid 16-epimerase activity","type":"related"}],"termid":"GO:0047524"}


id: SO:0001690
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 3' strand of the nucleotide sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_restriction_enzyme_junction","synonyms":[{"name":"3' restriction enzyme junction","type":"exact"}],"termid":"SO:0001690"}


id: PBO:0088589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit, TREX complex subunit Sus1","termid":"PBO:0088589"}


id: PBO:0066424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats","termid":"PBO:0066424"}


id: PBO:0040340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 3","termid":"PBO:0040340"}


id: PBO:0031397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytokinesis","termid":"PBO:0031397"}


id: GO:1902856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-motile cilium assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:cilia","PMID:23807208","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cilium assembly","termid":"GO:1902018"},{"relation_name":"is_a","term_name":"regulation of non-motile cilium assembly","termid":"GO:1902855"},{"relation_name":"negatively_regulates","term_name":"non-motile cilium assembly","termid":"GO:1905515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-motile cilium assembly","synonyms":[{"name":"down regulation of immotile primary cilium assembly","type":"related"},{"name":"down regulation of nonmotile primary cilia assembly","type":"related"},{"name":"down regulation of nonmotile primary cilium assembly","type":"related"},{"name":"down regulation of sensory cilium assembly","type":"related"},{"name":"down regulation of sensory cilium biogenesis","type":"related"},{"name":"down-regulation of immotile primary cilium assembly","type":"related"},{"name":"down-regulation of nonmotile primary cilia assembly","type":"related"},{"name":"down-regulation of nonmotile primary cilium assembly","type":"related"},{"name":"down-regulation of sensory cilium assembly","type":"related"},{"name":"down-regulation of sensory cilium biogenesis","type":"related"},{"name":"downregulation of immotile primary cilium assembly","type":"related"},{"name":"downregulation of nonmotile primary cilia assembly","type":"related"},{"name":"downregulation of nonmotile primary cilium assembly","type":"related"},{"name":"downregulation of sensory cilium assembly","type":"related"},{"name":"downregulation of sensory cilium biogenesis","type":"related"},{"name":"inhibition of immotile primary cilium assembly","type":"narrow"},{"name":"inhibition of nonmotile primary cilia assembly","type":"related"},{"name":"inhibition of nonmotile primary cilium assembly","type":"narrow"},{"name":"inhibition of sensory cilium assembly","type":"narrow"},{"name":"inhibition of sensory cilium biogenesis","type":"related"},{"name":"negative regulation of immotile primary cilium assembly","type":"related"},{"name":"negative regulation of nonmotile primary cilia assembly","type":"related"},{"name":"negative regulation of nonmotile primary cilium assembly","type":"related"},{"name":"negative regulation of sensory cilium assembly","type":"related"},{"name":"negative regulation of sensory cilium biogenesis","type":"related"}],"termid":"GO:1902856"}


id: GO:0019261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring.","definition_xrefs":["PMID:9148781","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,4-dichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:dcz","MetaCyc:14DICHLORBENZDEG-PWY"],"synonyms":[{"name":"1,4-dichlorobenzene breakdown","type":"exact"},{"name":"1,4-dichlorobenzene catabolism","type":"exact"},{"name":"1,4-dichlorobenzene degradation","type":"exact"}],"termid":"GO:0019261"}


id: FYPO:0001264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is abnormal during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell polarity","termid":"FYPO:0000026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005568","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell polarity during cellular hyperosmotic response","synonyms":[{"name":"abnormal cell polarity during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"abnormal cell polarity during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during cellular hyperosmotic response","type":"exact"},{"name":"cell polarity defects during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001264"}


id: PBO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schneckenbecken dysplasia","termid":"PBO:0002636"}


id: FYPO:0007829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"premature protein localization to cell division site","synonyms":[{"name":"advanced protein localization to cell division site","type":"exact"},{"name":"precocious protein localization to cell division site","type":"exact"},{"name":"premature protein localisation to cell division site","type":"exact"},{"name":"premature protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"premature protein localization to cell division site during vegetative growth","type":"exact"},{"name":"premature protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0007829"}


id: GO:0010317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Refers to the alpha subunit of the heterodimeric complex that possesses pyrophosphate-dependent phosphofructokinase activity.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"pyrophosphate-dependent phosphofructokinase complex","termid":"GO:0010316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex","synonyms":[{"name":"PFK complex, alpha-subunit","type":"related"}],"termid":"GO:0010317"}


id: GO:0010467
data:
  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