# terms

id: PBO:0059214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRN complex interacting protein","termid":"PBO:0059214"}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: GO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine modification","termid":"GO:0018209"}


id: GO:0103056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A53 + O2 + 2-oxoglutarate = gibberellin A44 diacid + carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A53, 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0103056)","termid":"GO:0103056"}


id: PBO:0066138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor 1","termid":"PBO:0066138"}


id: GO:0016332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization of epithelial cells in an embryo.","definition_xrefs":["GOC:mah","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of polarity of embryonic epithelium","termid":"GO:0016332"}


id: GO:0033709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NADP+ = D-ribulose + NADPH + H+. Can also produce D-ribulose.","definition_xrefs":["EC:1.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-arabinitol dehydrogenase (NADP+) activity","synonyms":[{"name":"ARD1p","type":"related"},{"name":"D-arabinitol dehydrogenase 1 activity","type":"broad"},{"name":"D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity","type":"related"},{"name":"D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity","type":"related"},{"name":"D-arabinitol:NADP+ dehydrogenase activity","type":"broad"},{"name":"NADP+-dependent D-arabinitol dehydrogenase activity","type":"broad"}],"termid":"GO:0033709"}


id: MONDO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent episodes of over-eating.","definition_xrefs":["NCIT:C97162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binge eating disorder","secondary_identifiers":["SCTID:439960005","UMLS:C0596170","icd11.foundation:1673294767","EFO:0005924","MESH:D002032","MEDGEN:154543"],"synonyms":[{"name":"binge eating","type":"exact"},{"name":"binge eating disorder","type":"exact"}],"termid":"MONDO:0005582","xrefs":{"Monarch":{"xref_id":"0005582"}}}


id: PR:O14306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9G1.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate 5-phosphatase C9G1.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.10c","synonyms":[{"name":"Spom972h-SPAC9G1.10c","type":"exact"}],"termid":"PR:O14306"}


id: MONDO:0971105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"neonatal renal venous thrombosis","secondary_identifiers":["MEDGEN:1863518","Orphanet:664912","UMLS:C5925061"],"termid":"MONDO:0971105","xrefs":{"Monarch":{"xref_id":"0971105"}}}


id: FYPO:0002390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle.","definition_xrefs":["GO:0007064","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic sister chromatid cohesion","synonyms":[{"name":"normal mitotic chromosome cohesion","type":"exact"},{"name":"normal mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal sister chromatid cohesion during mitosis","type":"exact"},{"name":"normal sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002390"}


id: PBO:0041113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-box and SPRY domain containing","termid":"PBO:0041113"}


id: MOD:00170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0161","PubMed:2341397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-glycyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIGly","type":"exact"},{"name":"LIPID GPI-anchor amidated glycine","type":"exact"},{"name":"N-glycyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00170"}


id: PBO:0073187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein P","termid":"PBO:0073187"}


id: GO:0007093
data:
  {"annotated_genes":["SJAG_04259","SJAG_04126","SJAG_00883","SJAG_02026","SJAG_01146","SJAG_01873","SJAG_01205","SJAG_04332","SJAG_03126","SJAG_02336","SJAG_01084","SJAG_00364","SJAG_00327","SJAG_01837","SJAG_04884","SJAG_04999","SJAG_00486","SJAG_01429","SJAG_00082","SJAG_03160","SJAG_01044","SJAG_02771","SJAG_00623","SJAG_02169","SJAG_03353","SJAG_01010","SJAG_02576","SJAG_03681","SJAG_03048","SJAG_03073","SJAG_04699","SJAG_00640","SJAG_04671","SJAG_01297","SJAG_03942","SJAG_03026","SJAG_02266","SJAG_02563","SJAG_02098","SJAG_01679","SJAG_03898","SJAG_01330","SJAG_04943","SJAG_03720","SJAG_01605","SJAG_00071","SJAG_01401","SJAG_03602","SJAG_01680","SJAG_01677","SJAG_00169","SJAG_01082","SJAG_02074","SJAG_02451","SJAG_03927","SJAG_04140","SJAG_01076","SJAG_01855","SJAG_04597","SJAG_03529","SJAG_01708","SJAG_03695","SJAG_00429","SJAG_04280","SJAG_05373","SJAG_01210","SJAG_04287","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92604,117922,101518,115795,105842,109204,116288,110234,113964],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[91875,96306,103384,118025,102476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[95455,118026,79874,113199,116486,81935,118254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[101118,102477,114039,76670,93320,119305,72877,80721,81315,101285,119133,95858,74095,108590,111306,118828,118081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[103566,90819,104306,110877,117924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[111662,93197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[100352,118027,96446,97762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[61476,102991,67814,111307,113731,119046,93321,62305,108591,90998,81188,77026,60765,101287,74097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[93322,108592,97925,113732,81100,81187,96447,76107,114040,118083,90999,109640,75673,80723,91045,102797,92327,104307,101288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[101360,103743,111898,116518,117579,108289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[80717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031578"},{"annotations":[96095],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[118700],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"A signaling process that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00082":null,"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01401":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02392":null,"SJAG_02451":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03353":null,"SJAG_03529":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04943":null,"SJAG_04999":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0072413","GO:0071780","GO:0031575","GO:0072474","GO:0072456"],"synonyms":[{"name":"mitotic cell cycle checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"related"},{"name":"signal transduction involved in mitotic G2/M transition checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle G1/S checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0007093","terms_by_termid":{"GO:0007094":null,"GO:0007095":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0031578":null,"GO:0033314":null,"GO:0044773":null,"GO:0044878":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: FYPO:0001914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is abnormal. In prospore membrane formation, the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed.","definition_xrefs":["PomBase:mah","GO:0032120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"},{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"},{"relation_name":"part_of","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000121","FYPO:0000002"],"is_obsolete":false,"name":"abnormal prospore membrane formation","synonyms":[{"name":"abnormal ascospore-type prospore membrane assembly","type":"exact"},{"name":"abnormal enclosure of nucleus by forespore membrane","type":"related"},{"name":"abnormal engulfment of nucleus by forespore membrane","type":"related"},{"name":"abnormal forespore membrane formation","type":"exact"}],"termid":"FYPO:0001914"}


id: GO:0043520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament assembly","termid":"GO:0031036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of myosin II filament assembly","termid":"GO:0043520"}


id: GO:0046074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTMP, deoxyribosylthymine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTMP metabolic process","termid":"GO:0046073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dTMP catabolic process","synonyms":[{"name":"dTMP breakdown","type":"exact"},{"name":"dTMP catabolism","type":"exact"},{"name":"dTMP degradation","type":"exact"}],"termid":"GO:0046074"}


id: PBO:0078880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 3","termid":"PBO:0078880"}


id: GO:0072350
data:
  {"annotated_genes":["SJAG_04577","SJAG_04362","SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[63164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006101"},{"annotations":[75621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing three carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01922":null,"SJAG_04362":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tricarboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"tricarboxylic acid metabolism","type":"exact"}],"termid":"GO:0072350","terms_by_termid":{"GO:0000053":null,"GO:0006101":null,"GO:0006102":null}}


id: MONDO:0020580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to germinoma, seminoma, or dysgerminoma.","definition_xrefs":["NCIT:C121618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinomatous germ cell tumor","secondary_identifiers":["MEDGEN:888719","UMLS:C4054897"],"synonyms":[{"name":"germinomatous germ cell tumor","type":"exact"}],"termid":"MONDO:0020580","xrefs":{"Monarch":{"xref_id":"0020580"}}}


id: MONDO:0021253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the gall bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary neoplasm","termid":"MONDO:0002514"},{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder neoplasm","secondary_identifiers":["UMLS:C0016978","EFO:0004606","MEDGEN:42134","MESH:D005706","NCIT:C3048"],"synonyms":[{"name":"gall bladder neoplasm","type":"exact"},{"name":"gall bladder neoplasm (disease)","type":"exact"},{"name":"gall bladder tumor","type":"exact"},{"name":"gall bladder tumour","type":"exact"},{"name":"gallbladder tumor","type":"exact"},{"name":"gallbladder tumour","type":"exact"},{"name":"neoplasm of gall bladder","type":"exact"},{"name":"neoplasm of gallbladder","type":"exact"},{"name":"neoplasm of the gallbladder","type":"exact"},{"name":"tumor of gall bladder","type":"exact"},{"name":"tumor of gallbladder","type":"exact"},{"name":"tumor of the gallbladder","type":"exact"},{"name":"tumour of gall bladder","type":"exact"},{"name":"tumour of gallbladder","type":"exact"},{"name":"tumour of the gallbladder","type":"exact"}],"termid":"MONDO:0021253","xrefs":{"Monarch":{"xref_id":"0021253"}}}


id: PBO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 4","termid":"PBO:0060901"}


id: FYPO:0004618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable astral microtubules.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"astral microtubules absent from cell","synonyms":[{"name":"absent astral microtubules","type":"exact"},{"name":"astral microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"astral microtubules absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic astral microtubules absent from cell","type":"exact"}],"termid":"FYPO:0004618"}


id: GO:0050007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nocardicin E = S-methyl-5'-thioadenosine + H+ + isonocardicin A.","definition_xrefs":["EC:2.5.1.38","RHEA:19845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"isonocardicin synthase activity","secondary_identifiers":["MetaCyc:ISONOCARDICIN-SYNTHASE-RXN","KEGG_REACTION:R03072"],"synonyms":[{"name":"S-adenosyl-L-methionine:nocardicin-E 3-amino-3-carboxypropyltransferase activity","type":"related"},{"name":"nocardicin aminocarboxypropyltransferase activity","type":"related"}],"termid":"GO:0050007"}


id: PBO:0054194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1569","termid":"PBO:0054194"}


id: PBO:0087864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of oleate genes; regulates genes involved in fatty acid utilization; zinc cluster protein; deletion confers sensitivity to Calcufluor white, and prevents growth on glycerol or lactate as sole carbon source","termid":"PBO:0087864"}


id: PBO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent gene","termid":"PBO:0001757"}


id: PBO:0053266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 4","termid":"PBO:0053266"}


id: GO:0010295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisate + H+ + NADPH + O2 = (+)-8'-hydroxyabscisate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.137","RHEA:12897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-abscisic acid 8'-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07202","MetaCyc:1.14.13.93-RXN"],"synonyms":[{"name":"(+)-ABA 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-Hydroxylase activity, Abscisate 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-hydroxylase activity","type":"related"},{"name":"abscisate,NADPH:oxygen oxidoreductase (8'-hydroxylating)","type":"related"},{"name":"abscisic acid 8'-hydroxylase activity","type":"exact"}],"termid":"GO:0010295"}


id: PBO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisA","termid":"PBO:0013076"}


id: PBO:0002968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine biosynthesis protein","termid":"PBO:0002968"}


id: PATO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered with warts or projections that resemble warts resulting in a hard rough surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rough","termid":"PATO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warty","termid":"PATO:0001361"}


id: GO:0061590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of phosphatidylcholine molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["PMID:23532839","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"calcium activated phosphatidylcholine scrambling","termid":"GO:0061590"}


id: PBO:0075139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 pseudogene 1","termid":"PBO:0075139"}


id: PBO:0090317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3","termid":"PBO:0090317"}


id: PBO:0064374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMPCA pseudogene 1","termid":"PBO:0064374"}


id: PBO:0050651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 1","termid":"PBO:0050651"}


id: PBO:0072465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 29","termid":"PBO:0072465"}


id: PBO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-anchoring factor Msd1","termid":"PBO:0018274"}


id: PBO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.31","termid":"PBO:0002211"}


id: MONDO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"combined immunodeficiency with skin granulomas","secondary_identifiers":["DOID:0112253","Orphanet:157949","UMLS:C2673536","OMIM:233650","GARD:13587","MEDGEN:435945","MESH:C567115"],"synonyms":[{"name":"CCHIDG","type":"related"},{"name":"CID due to RAG 1/2 deficiency","type":"exact"},{"name":"combined cellular and humoral immune defects with granulomas","type":"related"},{"name":"combined immunodeficiency due to RAG 1/2 deficiency","type":"exact"}],"termid":"MONDO:0009306","xrefs":{"Monarch":{"xref_id":"0009306"}}}


id: PBO:0082704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the membrane-bound TORC2 complex; binds to phosphoinositide-(4,5)-bisphosphate through the C-terminal PH domain, anchoring TORC2 to the plasma membrane; binds directly to Tor2p substrate and downstream TORC2 effector Ypk2p, through the conserved central CRIM domain; may function along with Tsc11p as a scaffold for integrity of the TORC2 complex; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0082704"}


id: PBO:0087118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING domain E3 ubiquitin ligase; involved in ubiquitin-mediated degradation of non-stop proteins and translationally stalled ER membrane proteins; component of ribosome-bound RQC (ribosome quality control) complex; degrades products of mRNAs lacking a termination codon regardless of a poly(A) tail; functional connections to chromatin modification; homolog of mouse Listerin, mutations in which reported to cause neurodegeneration","termid":"PBO:0087118"}


id: MONDO:0020554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heiner syndrome, also called cow's milk hypersensitivity, is a food induced pulmonary hypersensiting syndrome that affects primarily infants and that is characterized by pulmonary hemosiderosis, digestive bleeding, anemia and poor growing, improving with elimination of cow's milk from the diet.","definition_xrefs":["Orphanet:99932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary pulmonary hemosiderosis","termid":"MONDO:0020553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heiner syndrome","secondary_identifiers":["ICD10EXP:E83.1+","GARD:19714","MEDGEN:844833","SCTID:707441009","ICD9:518.89","UMLS:C3873343","ICD10EXP:J99.8*","icd11.foundation:187112249"],"synonyms":[{"name":"cow's milk hypersensitivity","type":"exact"}],"termid":"MONDO:0020554","xrefs":{"Monarch":{"xref_id":"0020554"}}}


id: GO:0045289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the generalized reaction: luciferin + O2 = oxidized luciferin + CO2 + light. There may be additional substrates and reactants involved in the reaction. The reaction results in light emission as luciferin returns to the ground state after enzymatic oxidation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"luciferin monooxygenase activity","synonyms":[{"name":"luciferase activity","type":"exact"},{"name":"luciferase monooxygenase activity","type":"related"}],"termid":"GO:0045289"}


id: GO:0045570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the growth of the imaginal disc.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc growth","termid":"GO:0045570"}


id: MONDO:0014792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paget disease of bone 6","secondary_identifiers":["MEDGEN:908743","DOID:0081369","UMLS:C4085250","OMIM:616833"],"synonyms":[{"name":"PDB6","type":"exact"},{"name":"Paget disease of bone 6","type":"exact"},{"name":"Paget disease of bone 6; PDB6","type":"exact"},{"name":"Paget disease of bone type 6","type":"exact"}],"termid":"MONDO:0014792","xrefs":{"Monarch":{"xref_id":"0014792"}}}


id: PBO:0038928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L2","termid":"PBO:0038928"}


id: PBO:0083059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate synthetase, involved in folic acid biosynthesis; catalyzes conversion of dihydropteroate to dihydrofolate in folate coenzyme biosynthesis; FOL3 has a paralog, RMA1, that arose from the whole genome duplication","termid":"PBO:0083059"}


id: GO:1902566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil activation.","definition_xrefs":["PMID:16254138","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil activation","termid":"GO:1902566"}


id: MONDO:0800046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic congenital hypothyroidism disorder characterized by mild global developmental delay in childhood, short stature, delayed bone age, and abnormal thyroid and selenium levels in serum (high total and free T4 concentrations, low T3, high reverse T3, normal to high TSH, decreased selenium). Intellectual disability, primary infertility, hypotonia, muscle weakness, and impaired hearing have also been reported.","definition_xrefs":["Orphanet:171706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral hypothyroidism","termid":"MONDO:0016412"},{"relation_name":"is_a","term_name":"thyroid hormone metabolism, abnormal","termid":"MONDO:0031432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal 1","secondary_identifiers":["GARD:17068","MESH:C566454","OMIM:609698","UMLS:C5676891","MEDGEN:1801974"],"synonyms":[{"name":"THMA1","type":"exact"},{"name":"short stature-delayed bone age due to thyroid hormone metabolism deficiency","type":"exact"},{"name":"thyroid hormone metabolism, abnormal","type":"broad"}],"termid":"MONDO:0800046","xrefs":{"Monarch":{"xref_id":"0800046"}}}


id: MONDO:0014056
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89135],"is_not":false,"summary":null,"term":"MONDO:0014056"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615134","UMLS:C3554574","MEDGEN:767488"],"synonyms":[{"name":"CMM9","type":"related"},{"name":"melanoma, cutaneous malignant, 9","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 9","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 9","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 9","type":"related"}],"termid":"MONDO:0014056","terms_by_termid":{"MONDO:0014056":null},"xrefs":{"Monarch":{"xref_id":"0014056"}}}


id: MONDO:0971177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 123 with HPV-related verrucosis","secondary_identifiers":["UMLS:C5935639","OMIM:620901","MEDGEN:1855052"],"termid":"MONDO:0971177","xrefs":{"Monarch":{"xref_id":"0971177"}}}


id: GO:0009025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tagatose 1,6-diphosphate = D-glyceraldehyde 3-phosphate + glycerone phosphate.","definition_xrefs":["RHEA:22948","EC:4.1.2.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tagatose-bisphosphate aldolase activity","secondary_identifiers":["MetaCyc:TAGAALDOL-RXN","KEGG_REACTION:R01069"],"synonyms":[{"name":"AgaY","type":"related"},{"name":"AgaZ","type":"related"},{"name":"D-tagatose-1,6-bisphosphate D-glyceraldehyde 3-phosphate-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"D-tagatose-1,6-bisphosphate aldolase activity","type":"related"},{"name":"D-tagatose-1,6-bisphosphate triosephosphate lyase activity","type":"exact"},{"name":"KbaY","type":"related"},{"name":"tagatose 1,6-diphosphate aldolase activity","type":"related"},{"name":"tagatose-1,6-bisphosphate aldolase 1","type":"exact"}],"termid":"GO:0009025"}


id: GO:0031826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2A serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2A serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2A receptor binding","type":"exact"},{"name":"type 2A serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031826"}


id: GO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded.","definition_xrefs":["GOC:tb","PMID:25081480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"sieve element differentiation","termid":"GO:0090603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element enucleation","termid":"GO:0090602"}


id: PBO:0061205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnin","termid":"PBO:0061205"}


id: PBO:0038407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulates_activity_of","termid":"PBO:0038407"}


id: MONDO:1012105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"internal hydrocephalus, non-human animal","termid":"MONDO:1011843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, dog","secondary_identifiers":["OMIA:000489-9615"],"termid":"MONDO:1012105","xrefs":{"Monarch":{"xref_id":"1012105"}}}


id: PBO:0077186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 9","termid":"PBO:0077186"}


id: MONDO:0018702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinicopathologic variant of multicentric Castleman's disease characterized by thrombocytopenia, ascites (anasarca), microcytic anemia, myelofibrosis, renal dysfunction, and organomegaly","definition_xrefs":["PMID:23801135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"},{"relation_name":"is_a","term_name":"idiopathic multicentric Castleman disease","termid":"MONDO:0035838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Castleman-Kojima disease","secondary_identifiers":["GARD:21902","Orphanet:457077","MEDGEN:1672503","UMLS:C4552543"],"synonyms":[{"name":"TAFRO syndrome","type":"exact"},{"name":"thrombocytopenia-anasarca-fever-renal insufficiency-organomegaly syndrome","type":"exact"}],"termid":"MONDO:0018702","xrefs":{"Monarch":{"xref_id":"0018702"}}}


id: PBO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type (zinc knuckle)","termid":"PBO:0000623"}


id: PBO:0055868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat protein 1","termid":"PBO:0055868"}


id: FYPO:0002135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0002131"],"is_obsolete":false,"name":"increased protein-RNA interaction","synonyms":[{"name":"increased RNA binding","type":"exact"},{"name":"increased RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002135"}


id: GO:1905287
data:
  {"annotated_genes":["SJAG_00256","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89717,103334],"is_not":false,"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any positive regulation of G2/M transition of mitotic cell cycle that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:26776736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010971"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_03309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G2/M transition of mitotic cell cycle involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitotic entry involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1905287","terms_by_termid":{"GO:1905287":null}}


id: PBO:0046113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1","termid":"PBO:0046113"}


id: PBO:0069434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 699, pseudogene","termid":"PBO:0069434"}


id: PR:Q9UUG5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain MRLC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.03","secondary_identifiers":["UniProtKB:Q9UUG5"],"synonyms":[{"name":"Spom972h-MYL12A","type":"exact"}],"termid":"PR:Q9UUG5"}


id: MONDO:1012823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital duplication of the spinal cords where there is a bony partition separating the cords and each is contained in their own meningeal sheath.","definition_xrefs":["PMID:30852979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split spinal cord malformation type I, cattle","secondary_identifiers":["OMIA:002233-9913"],"synonyms":[{"name":"SSCM Type I, cattle","type":"exact"}],"termid":"MONDO:1012823","xrefs":{"Monarch":{"xref_id":"1012823"}}}


id: PBO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p","termid":"PBO:0086073"}


id: PBO:0038713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 8","termid":"PBO:0038713"}


id: MONDO:1011420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperhomocysteinemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperhomocysteinemia, non-human animal","secondary_identifiers":["OMIA:002079"],"termid":"MONDO:1011420","xrefs":{"Monarch":{"xref_id":"1011420"}}}


id: GO:0099738
data:
  {"annotated_genes":["SJAG_04509","SJAG_03625","SJAG_04666","SJAG_02222","SJAG_04724","SJAG_04947","SJAG_00185","SJAG_00938","SJAG_04566","SJAG_05285","SJAG_03088","SJAG_02166","SJAG_03704","SJAG_04375","SJAG_03564","SJAG_02431","SJAG_03011","SJAG_03655","SJAG_02368","SJAG_01196","SJAG_03637","SJAG_04322","SJAG_04280","SJAG_02838","SJAG_00140","SJAG_03379","SJAG_03703","SJAG_04901","SJAG_00030","SJAG_00216","SJAG_04690","SJAG_00152","SJAG_03936","SJAG_02241","SJAG_00845","SJAG_00851","SJAG_02320","SJAG_04001","SJAG_01268","SJAG_00268","SJAG_03453","SJAG_03486","SJAG_00279","SJAG_00596","SJAG_03374","SJAG_02989","SJAG_05290","SJAG_04781","SJAG_01360","SJAG_02045","SJAG_00700","SJAG_04765","SJAG_00800","SJAG_03748","SJAG_01925","SJAG_04498","SJAG_01456","SJAG_01167","SJAG_00104","SJAG_04703","SJAG_01448","SJAG_00028","SJAG_04776","SJAG_03025","SJAG_04462","SJAG_03119","SJAG_02645","SJAG_00807","SJAG_01453","SJAG_04522","SJAG_02700","SJAG_04050","SJAG_03596","SJAG_02392","SJAG_00773","SJAG_00805","SJAG_01964","SJAG_02695","SJAG_01855","SJAG_01118","SJAG_00661","SJAG_02169","SJAG_00514","SJAG_03705","SJAG_01143","SJAG_01738","SJAG_02831","SJAG_00072","SJAG_01277","SJAG_00118","SJAG_00397","SJAG_01658","SJAG_01732","SJAG_03602","SJAG_02087","SJAG_00228","SJAG_04771","SJAG_02379","SJAG_03581","SJAG_00663","SJAG_04620","SJAG_04486","SJAG_01889","SJAG_01665","SJAG_01114","SJAG_01787","SJAG_03126","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105430,100922,100346,118021],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"},{"annotations":[99643,97320,104602,104911,106602,98220,113653,102105,97752,105688,101827,112853,105192,108821,89371,98780,89919,92717,98182,92951,93794,97113,90332,91208,101667,104582,90016,93262,105432,105636,113864,115081,101241,113359,116050,100902,112091,110314,114304,89387,97274,109005,95751,92642,100757,98889,95449,108981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051285"},{"annotations":[89742,120678,115050,92592,92621,120876,118189,116167,112746,118499,91732,71815,94300,96475,113947,119928,108065,117827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[102864,119929,112747,113948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"},{"annotations":[121291,95252,121296,121298,121546,121289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990753"},{"annotations":[116172,97755,118193,109580,89750,106605,111410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097575"},{"annotations":[102026,106484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"},{"annotations":[89393,100820,115054,99645,70371,97280,75720,96482,94429,90017,107307,99839,66309,112791,109581,105010,101246,120922,101833,57514,104606,112512,94306,73949,107107,90337,119919,63091,112750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031097"},{"annotations":[58213,99741,102896,119900,120684,114783,102047,103711,105865,109931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036391"},{"annotations":[92598,119057,95754,94212,90140,99948,102634,103201,98235,107141,119901,90828,94476,108169],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071341"}]},"cv_name":"cellular_component","definition":"The complete extent of cell cortex that underlies some some region of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"is_a","term_name":"cytoplasmic region","termid":"GO:0099568"},{"relation_name":"part_of","term_name":"cell 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cortex region","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null},"synonyms":[{"name":"perimembrane region","type":"exact"}],"termid":"GO:0099738","terms_by_termid":{"GO:0000085":null,"GO:0031097":null,"GO:0036391":null,"GO:0051285":null,"GO:0051325":null,"GO:0051329":null,"GO:0071341":null,"GO:0097575":null,"GO:0110115":null,"GO:0140472":null,"GO:1902716":null,"GO:1990463":null,"GO:1990753":null}}


id: GO:1901563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to camptothecin","synonyms":[{"name":"response to CPT","type":"exact"}],"termid":"GO:1901563"}


id: MONDO:0005726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cysticercosis (obsolete MONDO:0005726)","termid":"MONDO:0005726","xrefs":{"Monarch":{"xref_id":"0005726"}}}


id: MONDO:0007758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic skin disorder caused by mutations in the KRT9 gene. It is characterized by hyperkeratosis in the palms and soles resulting in abnormal thickening of the skin in these areas.","definition_xrefs":["NCIT:C84693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"palmoplantar keratoderma, epidermolytic","termid":"MONDO:0968949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic palmoplantar keratoderma, 1","secondary_identifiers":["DOID:0070552","OMIM:144200","Orphanet:2199","SCTID:399955009","ICD9:757.39","GARD:2826"],"synonyms":[{"name":"EPPK","type":"exact"},{"name":"Ppke","type":"related"},{"name":"diffuse erythrodermic palmoplantar keratoderma, VC6rner type","type":"exact"},{"name":"diffuse erythrodermic palmoplantar keratoderma, Voerner type","type":"exact"},{"name":"diffuse erythrodermic palmoplantar keratoderma, Vörner type","type":"related"},{"name":"epidermolytic palmoplantar keratoderma of VC6rner","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma of Voerner","type":"exact"},{"name":"epidermolytic palmoplantar keratoderma of Vörner","type":"related"},{"name":"hyperkeratosis palmoplantar localised epidermolytic","type":"related"},{"name":"hyperkeratosis palmoplantar localized epidermolytic","type":"related"},{"name":"hyperkeratosis, localised epidermolytic","type":"related"},{"name":"hyperkeratosis, localized epidermolytic","type":"related"},{"name":"keratoderma, epidermolytic palmoplantar","type":"related"},{"name":"keratosis of Greither","type":"related"},{"name":"keratosis palmaris Et plantaris Familiaris","type":"related"},{"name":"palmoplantar keratoderma, Vorner type","type":"related"},{"name":"palmoplantar keratoderma, epidermolytic","type":"related"},{"name":"palmoplantar keratoderma, epidermolytic, with knuckle pads","type":"related"},{"name":"tylosis","type":"related"}],"termid":"MONDO:0007758","xrefs":{"Monarch":{"xref_id":"0007758"}}}


id: GO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to type II interferon","synonyms":[{"name":"positive regulation of response to gamma-interferon","type":"related"},{"name":"positive regulation of response to immune interferon","type":"exact"},{"name":"positive regulation of response to interferon-gamma","type":"exact"},{"name":"positive regulation of response to type II IFN","type":"broad"}],"termid":"GO:0060332"}


id: PR:Q10494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26F1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.07","synonyms":[{"name":"Spom972h-SPAC26F1.07","type":"exact"}],"termid":"PR:Q10494"}


id: GO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neuropore closure","termid":"GO:0021506"}


id: PBO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 3","termid":"PBO:0061155"}


id: PBO:0035760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035760"}


id: MONDO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuropathy arising from inflammation of one or more nerves.","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis","secondary_identifiers":["DOID:1803","ICD9:729.2","SCTID:84299009","MEDGEN:14344","SCTID:128192007","MESH:D009443","UMLS:C0027813","NCIT:C116381"],"synonyms":[{"name":"nerve inflammation","type":"exact"},{"name":"peripheral neuritis","type":"exact"}],"termid":"MONDO:0002122","xrefs":{"Monarch":{"xref_id":"0002122"}}}


id: GO:0007066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"female meiosis sister chromatid cohesion","termid":"GO:0007066"}


id: GO:0120191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["GOC:vw","PMID:29899453","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase II","termid":"GO:0000122"},{"relation_name":"is_a","term_name":"negative regulation of termination of DNA-templated transcription","termid":"GO:0060567"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase II transcription","synonyms":[{"name":"down regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"down regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"down regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"down regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"down regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"down regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"down-regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"down-regulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"down-regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"down-regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"downregulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"downregulation of RNA polymerase II transcription termination","type":"exact"},{"name":"downregulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"downregulation of termination of RNA polymerase II transcription","type":"exact"},{"name":"downregulation of transcription termination from Pol II promoter","type":"exact"},{"name":"downregulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"negative regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"negative regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"negative regulation of transcription termination from RNA polymerase II promoter","type":"exact"},{"name":"repression of RNA 3'-end formation by RNA polymerase II","type":"narrow"},{"name":"repression of RNA polymerase II transcription termination","type":"narrow"},{"name":"repression of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"repression of termination of RNA polymerase II transcription","type":"narrow"},{"name":"repression of transcription termination from Pol II promoter","type":"narrow"},{"name":"repression of transcription termination from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0120191"}


id: GO:0035714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen dioxide","termid":"GO:0035713"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen dioxide","synonyms":[{"name":"cellular response to NO2","type":"exact"}],"termid":"GO:0035714"}


id: PBO:0063343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 3","termid":"PBO:0063343"}


id: GO:0019585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid metabolic process","termid":"GO:0006063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate metabolic process","secondary_identifiers":["Wikipedia:Glucuronic_acid","GO:0019699"],"synonyms":[{"name":"glucuronate metabolism","type":"exact"}],"termid":"GO:0019585"}


id: PBO:0120039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear and mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0120039"}


id: PBO:0081916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 885, pseudogene","termid":"PBO:0081916"}


id: MONDO:0007969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Melkersson-Rosenthal syndrome is a rare disorder characterized by a triad of recurrent orofacial swelling, relapsing facial paralysis and fissured tongue and onset in childhood or early adolescence. It has an estimated incidence of 8/10,000. The etiology is unknown but hereditary predisposition is suspected.","definition_xrefs":["Orphanet:2483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"cheilitis","termid":"MONDO:0002102"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Melkersson-Rosenthal syndrome","secondary_identifiers":["MEDGEN:6291","NORD:1429","OMIM:155900","UMLS:C0025235","EFO:1001039","MESH:D008556","NCIT:C84886","GARD:7010","MedDRA:10027166","DOID:1761"],"synonyms":[{"name":"MRS","type":"related"},{"name":"Melkersson syndrome","type":"related"},{"name":"Melkersson's syndrome","type":"exact"},{"name":"Melkersson-Rosenthal syndrome","type":"exact"},{"name":"Mros","type":"related"},{"name":"cheilitis Granulomatosa","type":"related"},{"name":"cheilitis granulomatosa of Mescher-Melkersson-Rosenthal","type":"exact"}],"termid":"MONDO:0007969","xrefs":{"Monarch":{"xref_id":"0007969"}}}


id: PBO:0027725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_fusion","termid":"PBO:0027725"}


id: PBO:0052749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 41","termid":"PBO:0052749"}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: PBO:0005022
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.3.1.16","termid":"PBO:0005022"}


id: PBO:0089104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family Vps74","termid":"PBO:0089104"}


id: PBO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis I","termid":"PBO:0007604"}


id: GO:0043778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 8 = cobyrinate.","definition_xrefs":["MetaCyc:RXN-8768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cobalt-precorrin-8 methylmutase activity","secondary_identifiers":["EC:5.4.99.60","RHEA:16209"],"synonyms":[{"name":"cobalt-precorrin 8 methylmutase activity","type":"exact"},{"name":"cobalt-precorrin 8X methylmutase activity","type":"exact"},{"name":"cobalt-precorrin-8X methylmutase activity","type":"exact"}],"termid":"GO:0043778"}


id: GO:2001081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->4)-beta-D-galactan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"(1->4)-beta-D-galactan binding","synonyms":[{"name":"(1,4)-beta-D-galactan binding","type":"exact"}],"termid":"GO:2001081"}


id: MONDO:0017628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myospherulosis","secondary_identifiers":["ICD9:136.8","Orphanet:306553","SCTID:81139004","UMLS:C0027123","MEDGEN:507970","GARD:21255"],"synonyms":[{"name":"spherulocytosis","type":"exact"},{"name":"subcutaneous spherulocystic disease","type":"exact"}],"termid":"MONDO:0017628","xrefs":{"Monarch":{"xref_id":"0017628"}}}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: MONDO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Plasmacytoma is a localized mass of neoplastic monoclonal plasma cells that represents approximately 5% of all plasma cell neoplasms. There are two separate entities: primary plasmacytoma of the bone and extramedullary plasmacytoma of the soft tissues. Of the extramedullary plasmacytomas, 80% occur in the head and neck, usually in the upper respiratory tract. The median age at diagnosis is 50 years and the male to female ratio is 3:1. Long-term survival is possible following local radiotherapy, particularly for soft tissue presentations.","definition_xrefs":["Orphanet:86855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"plasmacytoma","secondary_identifiers":["SCTID:415112005","EFO:0006738","ICD9:238.6","MedDRA:10035484","MESH:D010954","DOID:3721","GARD:13446","icd11.foundation:1811140613","ICDO:9731/3","UMLS:C0032131","NCIT:C9349","MEDGEN:18506"],"synonyms":[{"name":"anaplastic plasmacytoma","type":"related"},{"name":"anaplastic skeletal plasmacytoma (type)","type":"related"},{"name":"anaplastic solitary extramedullary plasmacytoma of the cecum (type)","type":"related"},{"name":"extramedullary anaplastic plasmacytoma (type)","type":"related"},{"name":"myeloma - solitary","type":"related"},{"name":"myeloma, solitary","type":"related"},{"name":"plasmacytoma","type":"exact"},{"name":"solitary myeloma","type":"related"},{"name":"solitary plasmacytoma","type":"narrow"}],"termid":"MONDO:0005615","xrefs":{"Monarch":{"xref_id":"0005615"}}}


id: MONDO:0024492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic qualifier indicating that a cancerous lesion is moderately differentiated.","definition_xrefs":["NCIT:C28078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor grade 1 or 2, general grading system","termid":"MONDO:0024495"},{"relation_name":"is_a","term_name":"tumor grade 2 or 3, general grading system","termid":"MONDO:0024496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 2, general grading system","synonyms":[{"name":"G2","type":"exact"},{"name":"grade 2","type":"exact"},{"name":"grade II","type":"exact"},{"name":"intermediate grade","type":"exact"},{"name":"moderately differentiated","type":"exact"}],"termid":"MONDO:0024492","xrefs":{"Monarch":{"xref_id":"0024492"}}}


id: PBO:0052957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kyphoscoliosis peptidase","termid":"PBO:0052957"}


id: MONDO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A endometrial carcinoma (disease) that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus endometrial carcinoma","secondary_identifiers":["DOID:0050939"],"synonyms":[{"name":"body of uterus endometrial carcinoma (disease)","type":"exact"},{"name":"endometrial carcinoma (disease) of body of uterus","type":"exact"}],"termid":"MONDO:0000553","xrefs":{"Monarch":{"xref_id":"0000553"}}}


id: PBO:0024821
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GEN1","termid":"PBO:0024821"}


id: PBO:0083760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential Hsp90p co-chaperone; necessary for passage through the START phase of the cell cycle; stabilizes protein kinase nascent chains and participates along with Hsp90p in their folding","termid":"PBO:0083760"}


id: PBO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 66","termid":"PBO:0044291"}


id: GO:0032306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of prostaglandin secretion","synonyms":[{"name":"regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032306"}


id: GO:2000018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonad development","termid":"GO:1905939"},{"relation_name":"regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male gonad development","synonyms":[{"name":"regulation of testicular development","type":"exact"},{"name":"regulation of testis development","type":"exact"}],"termid":"GO:2000018"}


id: PBO:0056687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 8","termid":"PBO:0056687"}


id: PBO:0017706
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae BET2","termid":"PBO:0017706"}


id: PBO:0079713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin like","termid":"PBO:0079713"}


id: GO:0071330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"},{"relation_name":"is_a","term_name":"response to trehalose-6-phosphate","termid":"GO:0080094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trehalose-6-phosphate stimulus","termid":"GO:0071330"}


id: FYPO:0007885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of Lms2-8 complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:33378677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased Lsm2-8 complex binding","synonyms":[{"name":"reduced Lsm2-8 complex binding","type":"exact"}],"termid":"FYPO:0007885"}


id: PBO:0047066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member A","termid":"PBO:0047066"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: PBO:0117431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 22","termid":"PBO:0117431"}


id: PBO:0057052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 138-1","termid":"PBO:0057052"}


id: FYPO:0005578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PomBase:mah","PMID:25579976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intergenic meiotic recombination","synonyms":[{"name":"normal meiotic intergenic recombination","type":"exact"}],"termid":"FYPO:0005578"}


id: GO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O = nitrate + 2 reduced [2Fe-2S]-[ferredoxin] + 2 H+.","definition_xrefs":["RHEA:21828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","termid":"GO:0016664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ferredoxin-nitrate reductase activity","secondary_identifiers":["EC:1.7.7.2","MetaCyc:1.7.7.2-RXN"],"synonyms":[{"name":"assimilatory ferredoxin-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate (ferredoxin) reductase activity","type":"related"},{"name":"nitrite:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047889"}


id: FYPO:0006973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate methyl ester measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular L-glutamate methyl ester level","synonyms":[{"name":"decreased cellular L-glutamate methyl ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular L-glutamate methyl ester level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamate methyl ester level during vegetative growth","type":"exact"},{"name":"reduced cellular L-glutamate methyl ester level","type":"exact"}],"termid":"FYPO:0006973"}


id: PBO:0070969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 7","termid":"PBO:0070969"}


id: PBO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; associates with rDNA chromatin in vivo; TBS1 has a paralog, HAL9, that arose from the whole genome duplication","termid":"PBO:0086019"}


id: SO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an clockwise, right handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, -90 degrees psi +120 degrees < +40 degrees, residue(i+1): -140 degrees < phi < -20 degrees, -90 < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_right_handed_type_one","secondary_identifiers":["BS:00235"],"synonyms":[{"name":"st turn right handed type one","type":"exact"},{"name":"st_turn_ir","type":"exact"}],"termid":"SO:0001144"}


id: GO:0042269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"regulation of NK cell mediated cell death","type":"exact"},{"name":"regulation of NK cell mediated cell killing","type":"exact"},{"name":"regulation of NK cell mediated cytolysis","type":"related"},{"name":"regulation of NK cell mediated cytotoxicity","type":"related"},{"name":"regulation of natural killer cell mediated cell death","type":"exact"},{"name":"regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"regulation of natural killer cell mediated cytolysis","type":"related"},{"name":"regulation of natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042269"}


id: FYECO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin","termid":"FYECO:0000392"}


id: MONDO:0009911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin deficiency, isolated","secondary_identifiers":["UMLS:C0271586","OMIM:264110","ICD9:253.4","SCTID:67873006","MEDGEN:75758","MESH:C562708"],"synonyms":[{"name":"prolactin deficiency, isolated","type":"exact"}],"termid":"MONDO:0009911","xrefs":{"Monarch":{"xref_id":"0009911"}}}


id: GO:0014726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extraocular skeletal muscle development","termid":"GO:0014726"}


id: MONDO:0005355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent narrowing or constriction of a coronary artery following surgical procedures performed to alleviate a prior obstruction.","definition_xrefs":["MESH:D023903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary stenosis","termid":"MONDO:0006715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary restenosis","secondary_identifiers":["DOID:4247","MEDGEN:182688","EFO:0004224","UMLS:C0948480"],"termid":"MONDO:0005355","xrefs":{"Monarch":{"xref_id":"0005355"}}}


id: GO:0010644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:kmv","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by electrical coupling","termid":"GO:0010644"}


id: _global:directly_regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B.\\n\\nA and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B.","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"_global:molecularly_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates_activity_of","secondary_identifiers":["RO:0002448"],"synonyms":[{"name":"molecularly controls","type":"exact"}],"termid":"_global:directly_regulates_activity_of"}


id: PBO:0026915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-stranded_DNA_binding","termid":"PBO:0026915"}


id: PBO:0072847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 2","termid":"PBO:0072847"}


id: MONDO:0025356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azoospermia, obstructive, with nephrolithiasis","secondary_identifiers":["OMIM:301060","UMLS:C5542351","MEDGEN:1779119"],"synonyms":[{"name":"OAZON","type":"exact"},{"name":"azoospermia, obstructive, with nephrolithiasis, X-linked recessive","type":"exact"}],"termid":"MONDO:0025356","xrefs":{"Monarch":{"xref_id":"0025356"}}}


id: MONDO:0040677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that is not confined to the epithelium, and has spread to the surrounding stroma.","definition_xrefs":["NCIT:C9480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive carcinoma","secondary_identifiers":["UMLS:C1334274","MEDGEN:233579"],"synonyms":[{"name":"invasive carcinoma","type":"exact"}],"termid":"MONDO:0040677","xrefs":{"Monarch":{"xref_id":"0040677"}}}


id: PBO:0066295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member W, pseudogene","termid":"PBO:0066295"}


id: PBO:0054899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2313","termid":"PBO:0054899"}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: PBO:0108751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 actin-like protein Arp6","termid":"PBO:0108751"}


id: PBO:0077508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225B","termid":"PBO:0077508"}


id: PBO:0068359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF139 divergent transcript","termid":"PBO:0068359"}


id: GO:0039695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription process that uses a viral DNA as a template.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA-templated viral transcription","secondary_identifiers":["VZ:1942"],"termid":"GO:0039695"}


id: PR:Q9Y7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rox3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7N2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.05c","synonyms":[{"name":"RNA polymerase II mediator complex protein rox3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rox3","type":"exact"},{"name":"mediator complex subunit 19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N2"}


id: GO:1904949
data:
  {"annotated_genes":["SJAG_02895","SJAG_04015","SJAG_02869","SJAG_00516","SJAG_02447","SJAG_03406","SJAG_00212","SJAG_01111","SJAG_01622","SJAG_02549","SJAG_02990","SJAG_03145","SJAG_03982","SJAG_04005","SJAG_00934","SJAG_00739","SJAG_03962","SJAG_02571","SJAG_04213","SJAG_03579","SJAG_01913","SJAG_03576","SJAG_00136","SJAG_03844","SJAG_03036","SJAG_01016","SJAG_02782","SJAG_04989","SJAG_04097","SJAG_02500","SJAG_00743","SJAG_02872","SJAG_00045","SJAG_02778","SJAG_04955","SJAG_03758","SJAG_05313","SJAG_00746","SJAG_02798","SJAG_03033","SJAG_05192","SJAG_02023","SJAG_03694","SJAG_05020","SJAG_05282","SJAG_00735","SJAG_03944","SJAG_01447","SJAG_00440","SJAG_01817","SJAG_02303","SJAG_04596","SJAG_04755","SJAG_02466","SJAG_05294","SJAG_02385","SJAG_02994","SJAG_02589","SJAG_03787","SJAG_01397","SJAG_01471","SJAG_03839","SJAG_01611","SJAG_02254","SJAG_04355","SJAG_01465","SJAG_00873"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69227,101967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904564"},{"annotations":[73529,78065,57927,117418,111042,115152,74687,73406,89666,68154,74395,73931,71654,103505,95901,61692,90744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[97803,115136,74739,94186,90024,95903,75454,67707,59021,81576,72355,89523,81438,96047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016586"},{"annotations":[73420,115299,114108,110137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[109417,78824,96028,115137,117028,74452,78127,73092,71653,79460,97804,89524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016514"},{"annotations":[109854,71847,78733,94264,100889,115155,119478,75434,98571,116733,111050,81816,74686,78064,115327,100158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"},{"annotations":[101877,105857,97561,97742,93945,62670,92039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[72974,98535,104616,100840,89901,111862,61019,120775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ATPase activity.","definition_xrefs":["PMID:9606181","GOC:TermGenie","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00440":null,"SJAG_00516":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_00934":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01465":null,"SJAG_01471":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02778":null,"SJAG_02782":null,"SJAG_02798":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02895":null,"SJAG_02990":null,"SJAG_02994":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03406":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03944":null,"SJAG_03962":null,"SJAG_03982":null,"SJAG_04005":null,"SJAG_04015":null,"SJAG_04097":null,"SJAG_04213":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04755":null,"SJAG_04955":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null,"SJAG_05294":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATPase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"VPS4 complex","type":"narrow"}],"termid":"GO:1904949","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000812":null,"GO:0016514":null,"GO:0016586":null,"GO:0031011":null,"GO:0070824":null,"GO:1904564":null}}


id: PBO:0066083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 11","termid":"PBO:0066083"}


id: FYPO:0000623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of positive regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal positive regulation of transcription","synonyms":[{"name":"abnormal activation of gene-specific transcription","type":"related"},{"name":"abnormal activation of transcription, DNA-dependent","type":"narrow"},{"name":"abnormal positive regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"abnormal positive regulation of gene-specific transcription","type":"related"},{"name":"abnormal positive regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal stimulation of gene-specific transcription","type":"narrow"},{"name":"abnormal stimulation of transcription, DNA-dependent","type":"narrow"},{"name":"abnormal up regulation of gene-specific transcription","type":"related"},{"name":"abnormal up regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal up-regulation of gene-specific transcription","type":"related"},{"name":"abnormal up-regulation of transcription, DNA-dependent","type":"exact"},{"name":"abnormal upregulation of gene-specific transcription","type":"related"},{"name":"abnormal upregulation of transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0000623"}


id: PBO:0062548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily M member 1, pseudogene","termid":"PBO:0062548"}


id: MONDO:0018762
data:
  {"annotated_genes":["SJAG_02829","SJAG_03698","SJAG_03597","SJAG_03418","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[88805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[87727,87726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[88854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"}]},"cv_name":"mondo","definition":"Congenital hypopituitarism is characterized by multiple pituitary hormone deficiency, including somatotroph, thyrotroph, lactotroph, corticotroph or gonadotroph deficiencies, due to mutations of pituitary transcription factors involved in pituitary ontogenesis.","definition_xrefs":["Orphanet:467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_02829":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null},"genotype_count":0,"is_obsolete":false,"name":"non-acquired combined pituitary hormone deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680091","NANDO:2200312","ICD10CM:E23.0","MEDGEN:1842250","GARD:2252"],"synonyms":[{"name":"congenital combined pituitary hormone deficiency","type":"exact"},{"name":"congenital hypopituitarism","type":"exact"}],"termid":"MONDO:0018762","terms_by_termid":{"MONDO:0012794":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0032787":null},"xrefs":{"Monarch":{"xref_id":"0018762"}}}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: MONDO:0004511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the lower clivus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clivus meningioma","termid":"MONDO:0003908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower clivus meningioma","secondary_identifiers":["MEDGEN:235264","DOID:8239","NCIT:C5288","UMLS:C1334434"],"synonyms":[{"name":"meningioma of Lower clivus","type":"exact"},{"name":"meningioma of the lower clivus","type":"exact"}],"termid":"MONDO:0004511","xrefs":{"Monarch":{"xref_id":"0004511"}}}


id: PBO:0063910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma","termid":"PBO:0063910"}


id: MONDO:0010977
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87377],"is_not":false,"summary":null,"term":"MONDO:0010977"}]},"cv_name":"mondo","definition":"Brody myopathy is a hereditary condition that affects the skeletal muscles (muscles used for movement). Symptoms typically begin in childhood and are characterized by muscle cramping and stiffening (myopathy) after exercise or other strenuous activity. These symptoms can worsen in cold temperatures and are usually painless, however, some individuals may have mild discomfort. Some cases of Brody myopathy are caused by mutations in the ATP2A1 gene. The cause of Brody myopathy for individuals not found to have an ATP2A1 gene mutation remains unknown. Brody myopathy is usually inherited in an autosomal recessive manner with a few reported cases of autosomal dominant inheritance. While there is no one treatment for Brody myopathy, certain muscle relaxants, such as dantrolene and blood pressure medications called calcium channel blockers, such as verapamil may be useful. Some researchers suggest that individuals found to have an ATP2A1 gene mutation have a slightly different disorder in which symptoms appear at an earlier age. They use the disease term 'Brody disease' for individuals with an identifiedmutation versus 'Brody syndrome' for those that do not. More research may help clarify whether these are two different disorders or a variation of the same disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein SERCA1","termid":"MONDO:0016199"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Brody myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9158","OMIM:601003","MESH:C536607","Orphanet:53347","SCTID:703530005","ICD9:359.89","MEDGEN:371441","DOID:0050692","UMLS:C1832918"],"synonyms":[{"name":"Brody disease","type":"related"},{"name":"Brody myopathy","type":"exact"},{"name":"sarcoplasmic reticulum -Ca2+ATPase deficiency","type":"related"}],"termid":"MONDO:0010977","terms_by_termid":{"MONDO:0010977":null},"xrefs":{"Monarch":{"xref_id":"0010977"}}}


id: MOD:00882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-aminoethyl)cysteine.","definition_xrefs":["PubMed:12923550","DeltaMass:171","Unimod:472#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminoethyl)cysteine (Ser)","synonyms":[{"name":"AEC-MAEC","type":"related"},{"name":"Aminoethyl Cysteinyl (AECys)","type":"exact"},{"name":"aminoethylcysteine","type":"related"}],"termid":"MOD:00882"}


id: GO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose catabolism in response to heat stress (obsolete GO:0090442)","synonyms":[{"name":"trehalose catabolic process in response to heat stress","type":"exact"}],"termid":"GO:0090442"}


id: MONDO:0100329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The initial viral infectious disase that causes illness.","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary viral infectious disease","termid":"MONDO:0100329","xrefs":{"Monarch":{"xref_id":"0100329"}}}


id: PBO:0057039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130b","termid":"PBO:0057039"}


id: PBO:0087271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase and subunit of TFIIK, a TFIIH subassembly; phosphorylates the C-terminal domain (CTD) of RNAPII (Ser5 and Ser7); facilitates recruitment of mRNA 5'-capping and polyadenylation factors to the RNAPII holoenzyme complex; minor role in RNAPII transcription; role in RNAPI transcription; regulates Atg1p kinase complex assembly during nitrogen starvation induced autophagy; associates with cyclin Ccl1p; relocalizes to the cytosol in response to hypoxia; ortholog of human CDK7","termid":"PBO:0087271"}


id: PBO:0083035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase; required for biosynthesis of isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; also has a role in tRNA gene-mediated silencing; gene encodes two isozymic forms; converts to a prion form, prion conversion contributes to azole antifungal resistance by upregulating ergosterol biosynthesis; homolog of human TRIT1, a mutation in which is associated with severe combined respiratory chain defects","termid":"PBO:0083035"}


id: MONDO:1010766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, domestic cat","secondary_identifiers":["OMIA:001055-9685"],"termid":"MONDO:1010766","xrefs":{"Monarch":{"xref_id":"1010766"}}}


id: MONDO:0000473
data:
  {"annotated_genes":["SJAG_02977","SJAG_00210","SJAG_03081","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89169,89170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012011"},{"annotations":[89180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007781"},{"annotations":[88765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"}]},"cv_name":"mondo","definition":"An impairment of the structure or function of the blood vessels which carry blood away from the heart.","definition_xrefs":["NCIT:C35317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_02218":null,"SJAG_02977":null,"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"arterial disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050828","ICD9:447.8","MEDGEN:208875","SCTID:359557001","ICD9:447.9","UMLS:C0852949"],"synonyms":[{"name":"arterial disease","type":"exact"},{"name":"arterial disorder","type":"exact"},{"name":"arteriopathy","type":"exact"},{"name":"artery disease","type":"exact"},{"name":"artery disease or disorder","type":"exact"},{"name":"disease of artery","type":"exact"},{"name":"disease or disorder of artery","type":"exact"},{"name":"disorder of artery","type":"exact"}],"termid":"MONDO:0000473","terms_by_termid":{"MONDO:0007781":null,"MONDO:0012011":null,"MONDO:0013458":null},"xrefs":{"Monarch":{"xref_id":"0000473"}}}


id: PBO:0038677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 3","termid":"PBO:0038677"}


id: PBO:0048606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB10 interacting GYF protein 2","termid":"PBO:0048606"}


id: GO:0038009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by the movement of a signaling receptor from the plasma membrane to the inside of the cell. Receptor internalization can have a positive or negative effect on a signaling pathway.","definition_xrefs":["PMID:17011816","PMID:19696798","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"regulation of signal transduction by receptor internalization","synonyms":[{"name":"regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038009"}


id: PBO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.18","termid":"PBO:0004854"}


id: FYPO:0000109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to papulacandin B. Cells stop growing (and may die) at a concentration of papulacandin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to papulacandin B","synonyms":[{"name":"hypersensitive to papulacandin B","type":"exact"},{"name":"sensitive to papulacandin B during mitotic cell cycle","type":"related"},{"name":"sensitive to papulacandin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000109"}


id: PBO:0075124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 175","termid":"PBO:0075124"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: PBO:0119293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase Coq4","termid":"PBO:0119293"}


id: MONDO:1012016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive ataxia with degenerative thoracic myelopathy, non-human animal","termid":"MONDO:1011829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia with degenerative thoracic myelopathy, sheep","secondary_identifiers":["OMIA:000079-9940"],"termid":"MONDO:1012016","xrefs":{"Monarch":{"xref_id":"1012016"}}}


id: PBO:0045535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxythymidylate kinase","termid":"PBO:0045535"}


id: PBO:0027520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_phase","termid":"PBO:0027520"}


id: MONDO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the FLNC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 26","secondary_identifiers":["UMLS:C4310749","OMIM:617047","DOID:0110327","MEDGEN:934716"],"synonyms":[{"name":"CMH26","type":"exact"},{"name":"FLNC hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 26","type":"exact"},{"name":"cardiomyopathy, familial restrictive 5","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 5","type":"related"},{"name":"hypertrophic cardiomyopathy caused by mutation in FLNC","type":"exact"},{"name":"hypertrophic cardiomyopathy type 26","type":"exact"}],"termid":"MONDO:0014883","xrefs":{"Monarch":{"xref_id":"0014883"}}}


id: PBO:0041809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium responsive transcription factor","termid":"PBO:0041809"}


id: PBO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup60","termid":"PBO:0005656"}


id: PR:000044778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen K63-polyubiquitinated form in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000044772.","definition_xrefs":["PRO:DAN","PomBase:MAH","PMID:16641370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63polyUbiq:(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-polyubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA K63-polyubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA polyubiquitinated form (Schizosaccharomyces pombe)","type":"related"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen K63-polyubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63polyUbiq+","type":"exact"},{"name":"pcn1/K63polyUbiq:(K164)","type":"exact"}],"termid":"PR:000044778"}


id: MONDO:0800449
data:
  {"annotated_genes":["SJAG_02068","SJAG_04790","SJAG_00158"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87169,87168,87167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[87426,87425,87424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"lysosomal acid lipase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:381622932","MESH:C531854","SCTID:715923003","GARD:12097","OMIMPS:278000","MEDGEN:1807768","DOID:0080217","Orphanet:275761","UMLS:C5574740"],"synonyms":[{"name":"LAL deficiency","type":"exact"}],"termid":"MONDO:0800449","terms_by_termid":{"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0800449"}}}


id: MONDO:0016620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically and clinically heterogeneous inherited disorder characterized by digital clubbing and osteoarthropathy, with variable features of pachydermia, delayed closure of the fontanels, and congenital heart disease. There are two types of PHO: pachydermoperiostosis and cranio-osteoarthropathy.","definition_xrefs":["Orphanet:248095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypertrophic osteoarthropathy","secondary_identifiers":["MESH:D010004","NANDO:1200642","OMIMPS:259100","NCIT:C85023","SCTID:88220006","MedDRA:10051686","NANDO:2100288","DOID:14283","icd11.foundation:792225761","Orphanet:2796","UMLS:C0029411","MEDGEN:18210","NANDO:2201004","GARD:20667"],"synonyms":[{"name":"PDP","type":"exact"},{"name":"PHO","type":"exact"},{"name":"PHOAR1","type":"related"},{"name":"Touraine Solente Gole syndrome","type":"exact"},{"name":"Touraine-Solente-Gole syndrome","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, type 1","type":"exact"},{"name":"hypertropic osteoarthropathy, primary","type":"exact"},{"name":"idiopathic hypertrophic osteoarthropathy","type":"exact"},{"name":"pachydermoperiostosis","type":"exact"},{"name":"pachydermoperiostosis of nail","type":"exact"},{"name":"pachydermoperiostosis of nail [ambiguous]","type":"exact"},{"name":"pachydermoperiostosis syndrome","type":"exact"}],"termid":"MONDO:0016620","xrefs":{"Monarch":{"xref_id":"0016620"}}}


id: PBO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.-","termid":"PBO:0001122"}


id: PBO:0090604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1","termid":"PBO:0090604"}


id: PBO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp7 (predicted)","termid":"PBO:0002031"}


id: PBO:0059389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S24","termid":"PBO:0059389"}


id: PBO:0108683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp7","termid":"PBO:0108683"}


id: PATO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality inhering in a bearer by virtue of the bearer's vertical dimension of extension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"height","termid":"PATO:0000119"}


id: MONDO:0007178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurocephalosyndactyly","secondary_identifiers":["MEDGEN:354732","Orphanet:1219","icd11.foundation:1849836237","OMIM:109050","UMLS:C1862380","MESH:C566235"],"synonyms":[{"name":"Auralcephalosyndactyly","type":"related"},{"name":"Kurczynski-Casperson syndrome","type":"related"},{"name":"aural cephalosyndactyly","type":"related"},{"name":"aurocephalosyndactyly","type":"exact"}],"termid":"MONDO:0007178","xrefs":{"Monarch":{"xref_id":"0007178"}}}


id: PBO:0068802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 39, pseudogene","termid":"PBO:0068802"}


id: PBO:0088127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein; involved in multiple drug resistance and metal sensitivity; ATP-binding cassette (ABC) family member involved in drug transport; potential Cdc28p substrate; induced under respiratory conditions; VMR1 has a paralog, YBT1, that arose from the whole genome duplication","termid":"PBO:0088127"}


id: PBO:0061621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 5","termid":"PBO:0061621"}


id: GO:0030579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of SMAD signaling proteins by ubiquitination and targeting to the proteasome.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-dependent SMAD protein catabolic process (obsolete GO:0030579)","synonyms":[{"name":"ubiquitin-dependent SMAD protein breakdown","type":"exact"},{"name":"ubiquitin-dependent SMAD protein catabolism","type":"exact"},{"name":"ubiquitin-dependent SMAD protein degradation","type":"exact"}],"termid":"GO:0030579"}


id: RO:HOM0000029
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Heterochronous homology that is produced by a retention in adults of a species of traits previously seen only in juveniles.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_heterochronous_homology_relationship_with","termid":"RO:HOM0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paedomorphorsis_relationship_with","synonyms":[{"name":"juvenification","type":"exact"},{"name":"pedomorphosis","type":"exact"}],"termid":"RO:HOM0000029"}


id: PBO:0053791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1044","termid":"PBO:0053791"}


id: GO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube.","definition_xrefs":["GOC:tb","ISBN:0198506732","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelium","synonyms":[{"name":"epithelium morphogenesis","type":"exact"}],"termid":"GO:0002009"}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: MONDO:0020676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of central nervous system or retinal vasculature (obsolete MONDO:0020676)","synonyms":[{"name":"central nervous system or retinal vascular disease","type":"exact"},{"name":"retina/CNS vascular disease","type":"exact"}],"termid":"MONDO:0020676","xrefs":{"Monarch":{"xref_id":"0020676"}}}


id: MONDO:0017424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic brachydactyly","secondary_identifiers":["Orphanet:294937"],"synonyms":[{"name":"brachydactyly","type":"related"},{"name":"isolated brachydactyly","type":"related"},{"name":"nonsyndromic brachydactyly","type":"exact"}],"termid":"MONDO:0017424","xrefs":{"Monarch":{"xref_id":"0017424"}}}


id: PBO:0087130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein and negative regulator of START; binds mRNA of the G1 cyclin CLN3 to stress granules for translational repression under conditions of stress; recruits the cyclin-dependent protein kinase Cdc28p to stress granules when stressful conditions are relieved, resulting in the dissolution of the granules, and resumption of translation; localizes to stress granules induced by glucose deprivation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087130"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: FYPO:0002081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N-tosyl-L-phenylalanyl chloromethyl ketone (TPCK).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on TPCK","synonyms":[{"name":"normal cell population growth in presence of TPCK","type":"exact"},{"name":"normal cell population growth on N-tosyl-L-phenylalanyl chloromethyl ketone","type":"exact"},{"name":"normal cell population growth on TPCK","type":"exact"},{"name":"normal cellular response to TPCK","type":"related"},{"name":"normal vegetative cell population growth on TPCK","type":"exact"}],"termid":"FYPO:0002081"}


id: MONDO:1012687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in dogs due to a mutation in the HEXA gene.","definition_xrefs":["OMIA:001461-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, dog","termid":"MONDO:1010840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXA-related, dog","synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), dog","type":"related"}],"termid":"MONDO:1012687","xrefs":{"Monarch":{"xref_id":"1012687"}}}


id: PBO:0058476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5583-2","termid":"PBO:0058476"}


id: PBO:0027876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_binding","termid":"PBO:0027876"}


id: MONDO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral folate receptor alpha deficiency (obsolete MONDO:0000420)","termid":"MONDO:0000420","xrefs":{"Monarch":{"xref_id":"0000420"}}}


id: PBO:0091623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA, hry1-antisense","termid":"PBO:0091623"}


id: PBO:0059241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L12","termid":"PBO:0059241"}


id: PBO:0072633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich protein 1","termid":"PBO:0072633"}


id: PBO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc13","termid":"PBO:0003792"}


id: PR:Q09739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic nuclear division protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.03","secondary_identifiers":["UniProtKB:Q09739"],"synonyms":[{"name":"Spom972h-MND1","type":"exact"},{"name":"meiotically up-regulated gene 32 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09739"}


id: PBO:0056650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 17","termid":"PBO:0056650"}


id: PBO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by glucose","termid":"PBO:0000113"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: PBO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS4Y1 pseudogene 1","termid":"PBO:0071948"}


id: PBO:0117396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC67A1 antisense RNA","termid":"PBO:0117396"}


id: PBO:0079002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 2-1","termid":"PBO:0079002"}


id: PBO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035780"}


id: PBO:0073011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 11","termid":"PBO:0073011"}


id: FYPO:0002008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased aconitate hydratase activity","synonyms":[{"name":"decreased aconitase activity","type":"exact"},{"name":"reduced aconitate hydratase activity","type":"exact"}],"termid":"FYPO:0002008"}


id: PR:O94559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.05c","synonyms":[{"name":"Spom972h-SPAC23C4.05c","type":"exact"}],"termid":"PR:O94559"}


id: GO:0051718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + CpG (in DNA) = S-adenosyl-L-homocysteine + 5-MeCpG (in DNA).","definition_xrefs":["PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates","secondary_identifiers":["Reactome:R-HSA-5334151"],"synonyms":[{"name":"HpaII methylase","type":"narrow"},{"name":"HpaII' methylase","type":"narrow"},{"name":"M.BsuRIa","type":"narrow"},{"name":"M.BsuRIb","type":"narrow"}],"termid":"GO:0051718"}


id: PBO:0077267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 9","termid":"PBO:0077267"}


id: RO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a piece of evidence and an entity that plays a role in supporting that evidence.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_evidence_with_support_from","termid":"RO:0002614"}


id: MONDO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallopian tube carcinoma that has developed in relatives of patients that have a history of fallopian tube carcinoma.","definition_xrefs":["NCIT:C40455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary fallopian tube carcinoma","secondary_identifiers":["DOID:7266","UMLS:C1512418","MEDGEN:307556"],"synonyms":[{"name":"familial fallopian tube carcinoma","type":"exact"},{"name":"familiar fallopian tube carcinoma","type":"related"},{"name":"hereditary fallopian tube cancer","type":"exact"},{"name":"hereditary fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0004166","xrefs":{"Monarch":{"xref_id":"0004166"}}}


id: PBO:0084737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms a complex with Tim8p that delivers a subset of hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0084737"}


id: PBO:0089169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop4","termid":"PBO:0089169"}


id: MONDO:0957922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 52","secondary_identifiers":["OMIM:620570","UMLS:C5882714","MEDGEN:1852921"],"termid":"MONDO:0957922","xrefs":{"Monarch":{"xref_id":"0957922"}}}


id: GO:0002888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte mediated immunity","synonyms":[{"name":"activation of myeloid leukocyte mediated immunity","type":"narrow"},{"name":"stimulation of myeloid leukocyte mediated immunity","type":"narrow"},{"name":"up regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"up-regulation of myeloid leukocyte mediated immunity","type":"exact"},{"name":"upregulation of myeloid leukocyte mediated immunity","type":"exact"}],"termid":"GO:0002888"}


id: PBO:0027779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytokinesis","termid":"PBO:0027779"}


id: GO:0099554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of gaseous molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}


id: PBO:0086965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory protein that binds Pdc2p and Thi2p transcription factors; activates thiamine biosynthesis transcription factors Pdc2p and Thi2p by binding to them, but releases and de-activates them upon binding to thiamine pyrophosphate (TPP), the end product of the pathway; has similarity to decarboxylases but enzymatic activity is not detected","termid":"PBO:0086965"}


id: GO:0000333
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72429],"is_not":false,"summary":null,"term":"GO:0000333"}]},"cv_name":"cellular_component","definition":"The minimal catalytic core of telomerase is a ribonucleoprotein complex composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition.","definition_xrefs":["PMID:11884619","PMID:1808260","GOC:BHF-UCL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"},{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"telomerase catalytic core complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TERT-TERC complex","type":"related"}],"termid":"GO:0000333","terms_by_termid":{"GO:0000333":null}}


id: GO:2000157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ubiquitin-specific protease activity (obsolete GO:2000157)","synonyms":[{"name":"negative regulation of UBP","type":"related"},{"name":"negative regulation of UCH2","type":"related"},{"name":"negative regulation of deubiquitinase activity","type":"exact"},{"name":"negative regulation of ubiquitin hydrolase activity","type":"exact"}],"termid":"GO:2000157"}


id: PBO:0108599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulates_characteristic","termid":"PBO:0108599"}


id: PBO:0084419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major exo-1,3-beta-glucanase of the cell wall; involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes; EXG1 has a paralog, SPR1, that arose from the whole genome duplication","termid":"PBO:0084419"}


id: GO:0010786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the trans-Golgi to the endosome, forming a vesicle coat.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coating of Golgi vesicle","termid":"GO:0048202"},{"relation_name":"part_of","term_name":"vesicle targeting, trans-Golgi to endosome","termid":"GO:0048203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0006810","GO:0008150","GO:0044085","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle, trans-Golgi to endosome targeting","termid":"GO:0010786"}


id: FYPO:0006146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ion starvation and during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:24569997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during meiotic cell cycle","termid":"FYPO:0006976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"normal RNA accumulation during cellular response to copper ion starvation during meiotic cell cycle","type":"related"},{"name":"normal RNA level during meiotic cell cycle during copper starvation","type":"exact"},{"name":"normal cellular RNA level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"normal mRNA level during cellular response to copper ion starvation during meiotic cell cycle","type":"narrow"},{"name":"normal transcript level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006146"}


id: PBO:0083925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose-2,6-bisphosphatase, required for glucose metabolism; protein abundance increases in response to DNA replication stress","termid":"PBO:0083925"}


id: PBO:0068355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138","termid":"PBO:0068355"}


id: PBO:0080971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand","termid":"PBO:0080971"}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: GO:0015193
data:
  {"annotated_genes":["SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102290],"is_not":false,"summary":null,"term":"GO:0015193"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-proline from one side of a membrane to the other. L-proline is pyrrolidine-2-carboxylic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-proline transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005296","Reactome:R-HSA-8870354"],"synonyms":[{"name":"L-proline permease activity","type":"related"},{"name":"L-proline transporter activity","type":"broad"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015193","terms_by_termid":{"GO:0015193":null}}


id: MONDO:0032904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meesmann corneal dystrophy","termid":"MONDO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, Meesmann, 2","secondary_identifiers":["DOID:0080671","UMLS:C5231495","OMIM:618767","MEDGEN:1684798"],"synonyms":[{"name":"CORNEAL DYSTROPHY, MEESMANN, 2","type":"related"},{"name":"MECD2","type":"related"},{"name":"meesmann corneal dystrophy 2","type":"exact"}],"termid":"MONDO:0032904","xrefs":{"Monarch":{"xref_id":"0032904"}}}


id: PBO:0064220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 1","termid":"PBO:0064220"}


id: MONDO:0003089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that arises from the extrahepatic bile ducts.","definition_xrefs":["NCIT:C5862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct mucinous adenocarcinoma","termid":"MONDO:0002739"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:272368","UMLS:C1332552","DOID:4681"],"synonyms":[{"name":"bile duct mucoepidermoid carcinoma","type":"exact"},{"name":"extrahepatic bile duct mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of bile duct","type":"exact"},{"name":"mucoepidermoid carcinoma of the bile duct","type":"exact"}],"termid":"MONDO:0003089","xrefs":{"Monarch":{"xref_id":"0003089"}}}


id: FYECO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ammonium was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited ammonium","synonyms":[{"name":"+ limited NH4Cl","type":"related"}],"termid":"FYECO:0000253"}


id: PR:Q10062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoporphyrinogen oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10742:SF16","OMA:SCHPO00102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.07c","secondary_identifiers":["UniProtKB:Q10062"],"synonyms":[{"name":"PPO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPOX","type":"exact"}],"termid":"PR:Q10062"}


id: PBO:0053522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 517","termid":"PBO:0053522"}


id: PBO:0090538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11","termid":"PBO:0090538"}


id: PBO:0036087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036087"}


id: MONDO:0100473
data:
  {"annotated_genes":["SJAG_01995","SJAG_03881","SJAG_03316","SJAG_01162","SJAG_00043","SJAG_01612","SJAG_00988","SJAG_04608","SJAG_01351","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[88637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[88067,88066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[87741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033642"},{"annotations":[87846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"},{"annotations":[86985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that has its basis in the disruption of peptide and/or amine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01216":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_03316":null,"SJAG_03881":null,"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of peptide and amine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100473","terms_by_termid":{"MONDO:0007205":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009593":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0018767":null,"MONDO:0019531":null,"MONDO:0033642":null},"xrefs":{"Monarch":{"xref_id":"0100473"}}}


id: PBO:0081588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 516","termid":"PBO:0081588"}


id: PBO:0090058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2","termid":"PBO:0090058"}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: PBO:0072638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retbindin","termid":"PBO:0072638"}


id: PBO:0011475
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of soluble starch to glucose is 8.9 (mM min-1 ml-2)","termid":"PBO:0011475"}


id: GO:1900307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heptasaccharide transport","termid":"GO:1900295"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"negatively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltoheptaose transport","synonyms":[{"name":"down regulation of maltoheptaose transport","type":"exact"},{"name":"down-regulation of maltoheptaose transport","type":"exact"},{"name":"downregulation of maltoheptaose transport","type":"exact"},{"name":"inhibition of maltoheptaose transport","type":"narrow"}],"termid":"GO:1900307"}


id: PBO:0055966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and coiled-coil centrosomal protein 1","termid":"PBO:0055966"}


id: GO:0005849
data:
  {"annotated_genes":["SJAG_00961","SJAG_03624","SJAG_01791","SJAG_04022","SJAG_01599","SJAG_03233","SJAG_01175","SJAG_00527","SJAG_03126","SJAG_02037","SJAG_04587","SJAG_03594","SJAG_02720","SJAG_03728","SJAG_01412","SJAG_02865","SJAG_03853","SJAG_03226","SJAG_03500"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113297,74875,73069,78601,71844,95332,79332,74370,71746,81145,120257,72826,113957,72112,69700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005847"},{"annotations":[111808,113572,101016,95354,100059,101553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.","definition_xrefs":["GOC:mah","PMID:10357856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03728":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"mRNA cleavage factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0005849","terms_by_termid":{"GO:0005847":null,"GO:0005848":null}}


id: PBO:0113175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase; promotes global demethylation of H3K4 and represses noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p; phosphorylation by Tpk2p during glycolysis inhibits activity, nuclear localization, chromatin binding and promotes Not4p Ub-mediated degradation; negatively regulated by H3K14 acetylation; regulates sporulation timing by extending period of active transcription; regulates rDNA silencing; human homolog is JARID1C","termid":"PBO:0113175"}


id: PBO:0070007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1304, pseudogene","termid":"PBO:0070007"}


id: PR:Q9P7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.03","synonyms":[{"name":"Spom972h-SPCC24B10.03","type":"exact"}],"termid":"PR:Q9P7K2"}


id: GO:0090724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","PMID:16260607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"central region of growth cone","termid":"GO:0090724"}


id: PBO:0052072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin catalytic subunit A1 like 1","termid":"PBO:0052072"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity (obsolete GO:0034571)","termid":"GO:0034571"}


id: GO:0016893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters (obsolete GO:0016893)","synonyms":[{"name":"5'-endonuclease activity","type":"exact"},{"name":"endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","type":"related"}],"termid":"GO:0016893"}


id: PBO:0112985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylated cis-Golgi protein, homolog of human GRASP65; forms a complex with the coiled-coil protein Bug1p; required for unconventional protein secretion (UPS) of Acb1p in response to starvation; forms amyloid fibrils under heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0112985"}


id: GO:0045895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mating-type specific process that activates or increases the rate of cellular DNA-templated transcription.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating-type specific transcription, DNA-templated","termid":"GO:0007532"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mating-type specific transcription, DNA-templated","synonyms":[{"name":"activation of transcription, mating-type specific","type":"narrow"},{"name":"positive regulation of mating-type specific transcription, DNA-dependent","type":"exact"},{"name":"stimulation of transcription, mating-type specific","type":"narrow"},{"name":"up regulation of transcription, mating-type specific","type":"exact"},{"name":"up-regulation of transcription, mating-type specific","type":"exact"},{"name":"upregulation of transcription, mating-type specific","type":"exact"}],"termid":"GO:0045895"}


id: MONDO:0054801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythrocytosis, familial, 6","secondary_identifiers":["DOID:0111632","MEDGEN:1634191","OMIM:617980","UMLS:C4693822"],"synonyms":[{"name":"ECYT6","type":"related"},{"name":"erythrocytosis 6","type":"exact"},{"name":"erythrocytosis, Beta-globin type","type":"related"},{"name":"erythrocytosis, FAMILIAL, 6","type":"related"},{"name":"polycythemia, Beta-globin type","type":"related"}],"termid":"MONDO:0054801","xrefs":{"Monarch":{"xref_id":"0054801"}}}


id: PBO:0058433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4803","termid":"PBO:0058433"}


id: PBO:0044232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 1 pseudogene 1","termid":"PBO:0044232"}


id: GO:0003929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN small monomeric GTPase activity (obsolete GO:0003929)","synonyms":[{"name":"RAN small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003929"}


id: PBO:0084501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for prospore membrane morphogenesis; localizes to the prospore membrane (PSM) during sporulation; required for PSM elongation and closure; genetically antagonistic to SPO1; recruits Vps13p to the PSM during sporulation; interacts and functions cooperatively with Spo73p; mutants have defects in the PSM, aberrant spore wall formation and reduced PtdIns-phosphate pools in the PSM; contains three PH-like domains","termid":"PBO:0084501"}


id: GO:1900514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch utilization system complex assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of starch utilization system complex assembly","termid":"GO:1900512"},{"relation_name":"positively_regulates","term_name":"starch utilization system complex assembly","termid":"GO:0044574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of starch utilization system complex assembly","synonyms":[{"name":"activation of SUS complex assembly","type":"exact"},{"name":"activation of assembly of starch utilization system complex","type":"exact"},{"name":"activation of starch utilization system complex assembly","type":"narrow"},{"name":"positive regulation of SUS complex assembly","type":"exact"},{"name":"positive regulation of assembly of starch utilization system complex","type":"exact"},{"name":"up regulation of SUS complex assembly","type":"exact"},{"name":"up regulation of assembly of starch utilization system complex","type":"exact"},{"name":"up regulation of starch utilization system complex assembly","type":"exact"},{"name":"up-regulation of SUS complex assembly","type":"exact"},{"name":"up-regulation of assembly of starch utilization system complex","type":"exact"},{"name":"up-regulation of starch utilization system complex assembly","type":"exact"},{"name":"upregulation of SUS complex assembly","type":"exact"},{"name":"upregulation of assembly of starch utilization system complex","type":"exact"},{"name":"upregulation of starch utilization system complex assembly","type":"exact"}],"termid":"GO:1900514"}


id: PBO:0081707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 627","termid":"PBO:0081707"}


id: PBO:0027197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_nuclear_envelope_breakthrough","termid":"PBO:0027197"}


id: SO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a change in post translational processing of the peptide with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_post_translational_processing_variant","synonyms":[{"name":"polypeptide post translational processing variant","type":"exact"}],"termid":"SO:0001562"}


id: MONDO:0020143
data:
  {"annotated_genes":["SJAG_02518","SJAG_02716","SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88272,88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[87677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_02716":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"cerebral lipidosis with dementia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:16517004","UMLS:C5681730","Orphanet:98544","DOID:10742","ICD9:330.1","GARD:19491","MEDGEN:1825994"],"synonyms":[{"name":"cerebral lipidosis","type":"exact"}],"termid":"MONDO:0020143","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null},"xrefs":{"Monarch":{"xref_id":"0020143"}}}


id: PBO:0064614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 4","termid":"PBO:0064614"}


id: FYPO:0001913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ubiquitin ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished ubiquitin ligase activity","synonyms":[{"name":"abolished ubiquitin-protein ligase activity","type":"exact"},{"name":"ubiquitin ligase activity abolished","type":"exact"}],"termid":"FYPO:0001913"}


id: MONDO:0019014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mutilating palmoplantar keratoderma with periorificial keratotic plaques (obsolete MONDO:0019014)","termid":"MONDO:0019014","xrefs":{"Monarch":{"xref_id":"0019014"}}}


id: MOD:00819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-2-aminobutanoic acid.","definition_xrefs":["PubMed:11740505","RESID:AA0409","ChEBI:35619","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminobutanoic acid (Glu)","synonyms":[{"name":"(S)-2-aminobutanoic acid","type":"exact"},{"name":"Abu","type":"exact"},{"name":"L-2-amino-n-butyric acid","type":"exact"},{"name":"L-2-aminobutanoic acid","type":"exact"},{"name":"L-2-aminobutyric acid","type":"exact"},{"name":"L-alpha-amino-n-butyric acid","type":"exact"},{"name":"L-alpha-aminobutyric acid","type":"exact"},{"name":"L-butyrine","type":"exact"},{"name":"alpha-amino-n-butyric acid","type":"exact"},{"name":"alpha-aminobutyric acid","type":"exact"},{"name":"butyrine","type":"exact"},{"name":"dCbxGlu","type":"exact"}],"termid":"MOD:00819"}


id: GO:0035286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Division of a leg into a series of semi-repetitive parts or segments. Most arthropod appendages are visibly segmented; the Drosophila leg for example has nine segments, each separated from the next by a flexible joint.","definition_xrefs":["PMID:10357895"],"gene_count":0,"genotype_count":0,"name":"obsolete leg segmentation (obsolete GO:0035286)","synonyms":[{"name":"leg segmentation","type":"exact"}],"termid":"GO:0035286"}


id: PR:Q09859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.05c","secondary_identifiers":["UniProtKB:Q09859"],"synonyms":[{"name":"Spom972h-MSRA","type":"exact"},{"name":"peptide Met(O) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide-methionine (S)-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-methionine-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09859"}


id: GO:0009475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-molecular-weight cytochrome c (hexadecaheme) (obsolete GO:0009475)","synonyms":[{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"exact"}],"termid":"GO:0009475"}


id: PBO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 8","termid":"PBO:0060274"}


id: PBO:0069988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1283, pseudogene","termid":"PBO:0069988"}


id: PR:P0CT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.09c","synonyms":[{"name":"EF-1-alpha-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef101","type":"exact"}],"termid":"PR:P0CT53"}


id: PBO:0050056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, W (pseudogene)","termid":"PBO:0050056"}


id: PBO:0053026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3 pseudogene 2","termid":"PBO:0053026"}


id: PBO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_leptomycin_B","termid":"PBO:0031458"}


id: PATO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"magnitude","termid":"PATO:0002016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased magnitude","synonyms":[{"name":"high magnitude","type":"exact"}],"termid":"PATO:0002017"}


id: PBO:0046824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3","termid":"PBO:0046824"}


id: FYPO:0005007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005007)","synonyms":[{"name":"normal peptidyl-serine phosphorylation at RxxS site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"normal protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"}],"termid":"FYPO:0005007"}


id: FYECO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing ethanol as the carbon source, yeast extract and other components. The concentration of ethanol is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol YE","synonyms":[{"name":"ethanol rich medium","type":"broad"}],"termid":"FYECO:0000428"}


id: PBO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 divergent transcript","termid":"PBO:0060852"}


id: MONDO:0020132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete cranial nerve and nuclear aplasia (obsolete MONDO:0020132)","secondary_identifiers":["Orphanet:98518"],"termid":"MONDO:0020132","xrefs":{"Monarch":{"xref_id":"0020132"}}}


id: PBO:0078337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 3-1","termid":"PBO:0078337"}


id: PR:Q9HGM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrogen permease regulator 3-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen permease regulator 3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.04","secondary_identifiers":["UniProtKB:Q9HGM7"],"synonyms":[{"name":"Spom972h-NPRL3","type":"exact"}],"termid":"PR:Q9HGM7"}


id: GO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation involved in inflammatory response","synonyms":[{"name":"immune cell activation during inflammatory response","type":"related"},{"name":"leukocyte activation during inflammatory response","type":"related"}],"termid":"GO:0002269"}


id: PBO:0074183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC38A4 antisense RNA 1","termid":"PBO:0074183"}


id: GO:0071744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgE immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgE immunoglobulin complex","termid":"GO:0071742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"IgE B cell receptor complex","synonyms":[{"name":"membrane-bound IgE","type":"exact"},{"name":"surface IgE","type":"exact"}],"termid":"GO:0071744"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: PBO:0085749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in proteasome function; interacts with TORC1, Ure2 and Gdh2; overexpression leads to hypersensitivity to rapamycin and nuclear accumulation of Gln3; epitope-tagged protein localizes to the cytoplasm","termid":"PBO:0085749"}


id: PR:P40387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha,alpha-trehalose-phosphate synthase [UDP-forming] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.03","secondary_identifiers":["UniProtKB:P40387"],"synonyms":[{"name":"Spom972h-otsA","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40387"}


id: PBO:0054958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2372","termid":"PBO:0054958"}


id: PBO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1 (predicted)","termid":"PBO:0002718"}


id: PBO:0072445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 9","termid":"PBO:0072445"}


id: PBO:0057042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR133A1 host gene","termid":"PBO:0057042"}


id: PBO:0074944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 109A","termid":"PBO:0074944"}


id: MONDO:1012056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myelopathy, non-human animal","termid":"MONDO:1011839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myelopathy, dog","secondary_identifiers":["OMIA:000263-9615"],"termid":"MONDO:1012056","xrefs":{"Monarch":{"xref_id":"1012056"}}}


id: GO:0097071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of two interferon regulatory proteins (IRFs); may be homodimeric or heterodimeric. The activation of a latent closed conformation of IRF in the cytoplasm is triggered by phosphorylation of Ser/Thr residues in a C-terminal region. Phosphorylation stimulates the C-terminal autoinhibitory domain to attain a highly extended conformation triggering dimerization through extensive contacts to a second subunit.","definition_xrefs":["GOC:cna","PMID:20043992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor complex","synonyms":[{"name":"IRF complex","type":"exact"}],"termid":"GO:0097071"}


id: PBO:0078046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 36","termid":"PBO:0078046"}


id: PBO:0048476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 3","termid":"PBO:0048476"}


id: PBO:0043631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPB2 divergent transcript","termid":"PBO:0043631"}


id: PBO:0057204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374c","termid":"PBO:0057204"}


id: MONDO:0002921
data:
  {"annotated_genes":["SJAG_01647","SJAG_04183","SJAG_06022","SJAG_03145","SJAG_02229","SJAG_03025","SJAG_04816","SJAG_04887","SJAG_01671","SJAG_07005","SJAG_MIT20","SJAG_MIT13","SJAG_00260","SJAG_MIT04","SJAG_04553","SJAG_03992","SJAG_03379","SJAG_04567","SJAG_00885","SJAG_04397","SJAG_05199","SJAG_00319","SJAG_04665","SJAG_04473","SJAG_01665","SJAG_02265","SJAG_02658","SJAG_03815","SJAG_00088","SJAG_02398","SJAG_00750","SJAG_02050","SJAG_MIT03","SJAG_02919"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011451"},{"annotations":[86944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014051"},{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014667"},{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014668"},{"annotations":[87368,87369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013116"},{"annotations":[87123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[86995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[88609,88608,88610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013472"},{"annotations":[87988,87989,87987,87990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010789"},{"annotations":[87419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030935"},{"annotations":[87420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030937"},{"annotations":[87392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030974"},{"annotations":[88040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100294"},{"annotations":[86963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[87524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020714"},{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044714"},{"annotations":[87429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030927"},{"annotations":[88745,88746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[89111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[88173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859168"},{"annotations":[86915,86916,86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976133"},{"annotations":[88568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[87700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"},{"annotations":[88374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[87367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[88186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[86958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[88257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[87899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"},{"annotations":[88271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011835"}]},"cv_name":"mondo","definition":"A group of rare genetic muscle disorders characterized by hypotonia, muscle weakness, and delayed development of motor skills.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00260":null,"SJAG_00319":null,"SJAG_00750":null,"SJAG_00885":null,"SJAG_01647":null,"SJAG_01665":null,"SJAG_01671":null,"SJAG_02050":null,"SJAG_02229":null,"SJAG_02265":null,"SJAG_02398":null,"SJAG_02658":null,"SJAG_02919":null,"SJAG_03025":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_03815":null,"SJAG_03992":null,"SJAG_04183":null,"SJAG_04397":null,"SJAG_04473":null,"SJAG_04553":null,"SJAG_04567":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_04887":null,"SJAG_05199":null,"SJAG_06022":null,"SJAG_07005":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital structural myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:156050","NANDO:2200867","UMLS:C0752282","MESH:D020914","NCIT:C84648","DOID:422","NANDO:1200482"],"synonyms":[{"name":"centronuclear myopathy","type":"related"}],"termid":"MONDO:0002921","terms_by_termid":{"MONDO:0008070":null,"MONDO:0009725":null,"MONDO:0009783":null,"MONDO:0010789":null,"MONDO:0011451":null,"MONDO:0011835":null,"MONDO:0012238":null,"MONDO:0012239":null,"MONDO:0012538":null,"MONDO:0013116":null,"MONDO:0013117":null,"MONDO:0013307":null,"MONDO:0013472":null,"MONDO:0014051":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0014667":null,"MONDO:0014668":null,"MONDO:0020714":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0024553":null,"MONDO:0030927":null,"MONDO:0030935":null,"MONDO:0030937":null,"MONDO:0030974":null,"MONDO:0044714":null,"MONDO:0100294":null,"MONDO:0859168":null,"MONDO:0957993":null,"MONDO:0976133":null},"xrefs":{"Monarch":{"xref_id":"0002921"}}}


id: PBO:0059087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 1","termid":"PBO:0059087"}


id: PBO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A (predicted)","termid":"PBO:0001521"}


id: MONDO:1010303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal stenosis, non-human animal","secondary_identifiers":["OMIA:000947"],"termid":"MONDO:1010303","xrefs":{"Monarch":{"xref_id":"1010303"}}}


id: MONDO:0016218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of rare post-infectious neuropathies that usually occur in otherwise healthy patients. GBS is clinically heterogeneous and encompasses acute inflammatory demyelinating polyradiculoneuropathy (AIDP), acute motor axonal neuropathy (AMAN) and acute motor-sensory axonal neuropathy (AMSAN), Miller-Fisher syndrome (MFS) and some other regional variants.","definition_xrefs":["Orphanet:2103"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acute and subacute inflammatory demyelinating polyneuropathy (obsolete MONDO:0016137)","termid":"MONDO:0016137"},{"relation_name":"is_a","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Guillain-Barre syndrome","secondary_identifiers":["NCIT:C116345","MedDRA:10018767","GARD:6554","DOID:12842","EFO:0007292","MESH:D020275","SCTID:40956001","ICD10CM:G61.0","MEDGEN:5399","UMLS:C0018378"],"synonyms":[{"name":"GBS","type":"exact"},{"name":"Guillain Barre syndrome","type":"exact"},{"name":"Guillain Barré syndrome","type":"exact"},{"name":"Guillain-Barre-Strohl syndrome","type":"exact"},{"name":"Guillain-Barré syndrome","type":"exact"},{"name":"Guillain-Barré-Strohl syndrome","type":"exact"},{"name":"Landry's ascending paralysis","type":"related"},{"name":"Landry-Guillain-Barre-Strohl syndrome","type":"related"},{"name":"acute autoimmune peripheral neuropathy","type":"related"},{"name":"acute immune-mediated polyneuropathy","type":"related"},{"name":"acute inflammatory demyelinating polyneuropathy","type":"related"},{"name":"acute inflammatory neuropathy","type":"related"},{"name":"acute postinfectious polyneuropathy","type":"exact"},{"name":"post-infectious polyneuritis","type":"narrow"},{"name":"post-infective polyneuritis","type":"narrow"},{"name":"postinfectious polyneuritis","type":"narrow"}],"termid":"MONDO:0016218","xrefs":{"Monarch":{"xref_id":"0016218"}}}


id: GO:0021693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar Purkinje cell layer. This process pertains to the physical shaping of a rudimentary structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer structural organization","synonyms":[{"name":"cerebellar Purkinje cell layer structural organisation","type":"exact"}],"termid":"GO:0021693"}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: GO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host ubiquitin-protein ligase activity. Ubiquitin-protein ligase activity catalyzes the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.","definition_xrefs":["UniProtKB-KW:KW-1123"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host ubiquitin-protein ligase activity (obsolete GO:0039649)","synonyms":[{"name":"modulation of host E3 ubiquitin ligases by virus","type":"narrow"}],"termid":"GO:0039649"}


id: GO:1901414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:1901413"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0033013","GO:0006790","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"down regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"narrow"},{"name":"inhibition of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901414"}


id: PBO:0034781
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT overexpression expression profiling","termid":"PBO:0034781"}


id: FYPO:0009035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of formamide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to formamide","synonyms":[{"name":"resistance to formamide during mitotic cell cycle","type":"related"},{"name":"resistance to formamide during vegetative growth","type":"exact"},{"name":"resistant to formamide","type":"exact"}],"termid":"FYPO:0009035"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: PBO:0053923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1220","termid":"PBO:0053923"}


id: FYPO:0005187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"decreased transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of transport gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005187"}


id: MONDO:0009398
data:
  {"annotated_genes":["SJAG_00295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88163],"is_not":false,"summary":null,"term":"MONDO:0009398"}]},"cv_name":"mondo","definition":"Any hyperphosphatasia-intellectual disability syndrome in which the cause of the disease is a mutation in the PIGV gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatasia-intellectual disability syndrome","termid":"MONDO:0016596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"hyperphosphatasia with intellectual disability syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551502","OMIM:239300","DOID:0070433","MEDGEN:1647044","GARD:18349"],"synonyms":[{"name":"HPMRS1","type":"related"},{"name":"Mabry syndrome","type":"related"},{"name":"PIGV hyperphosphatasia-intellectual disability syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 2","type":"related"},{"name":"hyperphosphatasia with intellectual disability syndrome 1","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome type 1","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome 1","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome type 1","type":"exact"},{"name":"hyperphosphatasia-intellectual disability syndrome caused by mutation in PIGV","type":"exact"}],"termid":"MONDO:0009398","terms_by_termid":{"MONDO:0009398":null},"xrefs":{"Monarch":{"xref_id":"0009398"}}}


id: PBO:0045582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 4","termid":"PBO:0045582"}


id: PBO:0052071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin catalytic subunit A1","termid":"PBO:0052071"}


id: PBO:0038375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulated_by","termid":"PBO:0038375"}


id: PBO:0055335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2763","termid":"PBO:0055335"}


id: PBO:0076934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 2","termid":"PBO:0076934"}


id: GO:0043641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"},{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"novobiocin metabolic process","secondary_identifiers":["Wikipedia:Novobiocin"],"synonyms":[{"name":"novobiocin metabolism","type":"exact"}],"termid":"GO:0043641"}


id: GO:0033925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact.","definition_xrefs":["EC:3.2.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.96-RXN","Reactome:R-HSA-8853379"],"synonyms":[{"name":"N,N'-diacetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"di-N-acetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-D-glucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"endo-beta-(1->4)-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase D activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase F activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase H activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase L activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-acetylglucosaminidase activity","type":"related"},{"name":"endoglycosidase H activity","type":"related"},{"name":"endoglycosidase S activity","type":"related"},{"name":"glycopeptide-D-mannosyl-4-N-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"glycopeptide-D-mannosyl-N4-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein 1,4-N-acetamidodeoxy-beta-D-glycohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosamidase activity","type":"related"}],"termid":"GO:0033925"}


id: PATO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composition","secondary_identifiers":["PATO:0002015"],"synonyms":[{"name":"composed of","type":"exact"},{"name":"compositionality","type":"exact"},{"name":"content","type":"exact"},{"name":"structure, composition","type":"exact"}],"termid":"PATO:0000025"}


id: PBO:0085960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression causes cell cycle delay or arrest; green fluorescent protein (GFP)-fusion protein localizes to vacuole; null mutant displays elevated frequency of mitochondrial genome loss; relocalizes from nucleus to cytoplasm upon DNA replication stress; AIM20 has a paralog, SKG1, that arose from the whole genome duplication","termid":"PBO:0085960"}


id: MONDO:0017653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy and/or ataxia with myoclonus as major feature (obsolete MONDO:0017653)","secondary_identifiers":["Orphanet:306756"],"termid":"MONDO:0017653","xrefs":{"Monarch":{"xref_id":"0017653"}}}


id: PBO:0069422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 685, pseudogene","termid":"PBO:0069422"}


id: PBO:0080866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 7","termid":"PBO:0080866"}


id: GO:0033580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid at the surface of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation at cell surface (obsolete GO:0033580)","synonyms":[{"name":"protein amino acid galactosylation at cell surface","type":"exact"}],"termid":"GO:0033580"}


id: GO:0004496
data:
  {"annotated_genes":["SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81964],"is_not":false,"summary":null,"term":"GO:0004496"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.36","RHEA:17065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"mevalonate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02245","MetaCyc:MEVALONATE-KINASE-RXN","Reactome:R-HSA-191380"],"synonyms":[{"name":"ATP:(R)-mevalonate 5-phosphotransferase activity","type":"related"},{"name":"ATP:mevalonate 5-phosphotransferase activity","type":"related"},{"name":"MVA kinase activity","type":"related"},{"name":"mevalonate 5-phosphotransferase activity","type":"related"},{"name":"mevalonate kinase (phosphorylating)","type":"related"},{"name":"mevalonate phosphokinase activity","type":"related"},{"name":"mevalonic acid kinase activity","type":"related"},{"name":"mevalonic kinase activity","type":"related"}],"termid":"GO:0004496","terms_by_termid":{"GO:0004496":null}}


id: PBO:0076460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TALAM1 transcript, MALAT1 antisense RNA","termid":"PBO:0076460"}


id: GO:1904734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of electron transfer activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25416781"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of electron transfer activity (obsolete GO:1904734)","synonyms":[{"name":"activation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"activation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"activation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"activation of amicyanin","type":"narrow"},{"name":"activation of azurin","type":"narrow"},{"name":"activation of bacterial-type ferredoxin","type":"narrow"},{"name":"activation of chloroplast-type ferredoxin","type":"narrow"},{"name":"activation of copper electron carrier","type":"narrow"},{"name":"activation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of electron acceptor activity","type":"narrow"},{"name":"activation of electron carrier activity","type":"narrow"},{"name":"activation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"activation of electron donor activity","type":"narrow"},{"name":"activation of electron transfer flavoprotein","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"activation of electron transporter activity","type":"narrow"},{"name":"activation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"activation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"activation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of mononuclear iron electron carrier","type":"narrow"},{"name":"activation of polyferredoxin","type":"narrow"},{"name":"activation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"activation of rubredoxin","type":"narrow"},{"name":"activation of small blue copper electron carrier","type":"narrow"},{"name":"activation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"positive regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"positive regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"positive regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"positive regulation of amicyanin","type":"narrow"},{"name":"positive regulation of azurin","type":"narrow"},{"name":"positive regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"positive regulation of copper electron carrier","type":"narrow"},{"name":"positive regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of electron acceptor activity","type":"narrow"},{"name":"positive regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"positive regulation of electron donor activity","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"positive regulation of electron transporter activity","type":"related"},{"name":"positive regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"positive regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"positive regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"positive regulation of polyferredoxin","type":"narrow"},{"name":"positive regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"positive regulation of rubredoxin","type":"narrow"},{"name":"positive regulation of small blue copper electron carrier","type":"narrow"},{"name":"positive regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up regulation of amicyanin","type":"narrow"},{"name":"up regulation of azurin","type":"narrow"},{"name":"up regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up regulation of copper electron carrier","type":"narrow"},{"name":"up regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of electron acceptor activity","type":"narrow"},{"name":"up regulation of electron carrier activity","type":"related"},{"name":"up regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up regulation of electron donor activity","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up regulation of electron transporter activity","type":"related"},{"name":"up regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up regulation of polyferredoxin","type":"narrow"},{"name":"up regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up regulation of rubredoxin","type":"narrow"},{"name":"up regulation of small blue copper electron carrier","type":"narrow"},{"name":"up regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up-regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up-regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up-regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up-regulation of amicyanin","type":"narrow"},{"name":"up-regulation of azurin","type":"narrow"},{"name":"up-regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up-regulation of copper electron carrier","type":"narrow"},{"name":"up-regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of electron acceptor activity","type":"narrow"},{"name":"up-regulation of electron carrier activity","type":"related"},{"name":"up-regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up-regulation of electron donor activity","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up-regulation of electron transporter activity","type":"related"},{"name":"up-regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up-regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up-regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up-regulation of polyferredoxin","type":"narrow"},{"name":"up-regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up-regulation of rubredoxin","type":"narrow"},{"name":"up-regulation of small blue copper electron carrier","type":"narrow"},{"name":"up-regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"upregulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"upregulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"upregulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"upregulation of amicyanin","type":"narrow"},{"name":"upregulation of azurin","type":"narrow"},{"name":"upregulation of bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"upregulation of copper electron carrier","type":"narrow"},{"name":"upregulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of electron acceptor activity","type":"narrow"},{"name":"upregulation of electron carrier activity","type":"related"},{"name":"upregulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"upregulation of electron donor activity","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"upregulation of electron transporter activity","type":"related"},{"name":"upregulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"upregulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"upregulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of mononuclear iron electron carrier","type":"narrow"},{"name":"upregulation of polyferredoxin","type":"narrow"},{"name":"upregulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"upregulation of rubredoxin","type":"narrow"},{"name":"upregulation of small blue copper electron carrier","type":"narrow"},{"name":"upregulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904734"}


id: GO:0098730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The symmetric division of a male germline stem cell to produce two male germline stem cells. An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.","definition_xrefs":["PMID:19948499","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline stem cell symmetric division","termid":"GO:0098730"}


id: GO:0042821
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116413],"is_not":false,"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds.","definition_xrefs":["GOC:jl","PMID:21767669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal metabolic process","termid":"GO:0042817"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"pyridoxal biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal anabolism","type":"exact"},{"name":"pyridoxal biosynthesis","type":"exact"},{"name":"pyridoxal formation","type":"exact"},{"name":"pyridoxal synthesis","type":"exact"}],"termid":"GO:0042821","terms_by_termid":{"GO:0042821":null}}


id: GO:0048184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to the peptide hormone follistatin.","definition_xrefs":["GOC:mah","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete follistatin binding (obsolete GO:0048184)","synonyms":[{"name":"follistatin binding","type":"exact"}],"termid":"GO:0048184"}


id: PBO:0057491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 609","termid":"PBO:0057491"}


id: MONDO:0008924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital cataract-ichthyosis syndrome is characterized by congenital cataract associated with ichthyosis. It has been described in less than ten patients from two unrelated families. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:1376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital cataract-ichthyosis syndrome","secondary_identifiers":["MESH:C538281","MEDGEN:347122","UMLS:C1859315","OMIM:212400","GARD:1145"],"synonyms":[{"name":"Syndermotic cataract and congenital ichthyosis","type":"related"},{"name":"cataract and congenital ichthyosis","type":"related"}],"termid":"MONDO:0008924","xrefs":{"Monarch":{"xref_id":"0008924"}}}


id: PBO:0089482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor for RhoGEF, Art1","termid":"PBO:0089482"}


id: PBO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.6","termid":"PBO:0004991"}


id: PBO:0007715
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as pseudo","termid":"PBO:0007715"}


id: PBO:0068401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF217 antisense RNA 1 (head to head)","termid":"PBO:0068401"}


id: GO:0009066
data:
  {"annotated_genes":["SJAG_00881","SJAG_00309","SJAG_00714","SJAG_02972","SJAG_03306","SJAG_02832","SJAG_03712","SJAG_01061","SJAG_04042","SJAG_04459","SJAG_00396","SJAG_00107","SJAG_02689","SJAG_00502","SJAG_06635","SJAG_01404","SJAG_02388","SJAG_00395","SJAG_01955","SJAG_04149","SJAG_00234","SJAG_04098","SJAG_03659","SJAG_00869","SJAG_03881","SJAG_04549","SJAG_03312","SJAG_04688","SJAG_03152","SJAG_02450","SJAG_02290","SJAG_02276","SJAG_02293","SJAG_00432","SJAG_01466","SJAG_00830","SJAG_03985","SJAG_03556","SJAG_03671","SJAG_04425","SJAG_03614","SJAG_01630","SJAG_03141","SJAG_01574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66747,62030,113093,69930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[74117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006528"},{"annotations":[79486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[112788,104106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[72636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[112428,92566,105242,113098,105725,115263,110299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[102609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[78665,79591,59106,80146,82097,81009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[73887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[98278,78448,65303,76800,115462,79240,65968,78012,71922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[80852,72673,76322,113974,73616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[112663,114715,64052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"},{"annotations":[113975,62028,65477,71421,78784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00396":null,"SJAG_00432":null,"SJAG_00502":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02276":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02388":null,"SJAG_02450":null,"SJAG_02689":null,"SJAG_02832":null,"SJAG_02972":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03556":null,"SJAG_03614":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_03985":null,"SJAG_04042":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04688":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aspartate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8963693"],"synonyms":[{"name":"aspartate family amino acid metabolism","type":"exact"}],"termid":"GO:0009066","terms_by_termid":{"GO:0006528":null,"GO:0006532":null,"GO:0006533":null,"GO:0006555":null,"GO:0006567":null,"GO:0009086":null,"GO:0009088":null,"GO:0019280":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0070981":null,"GO:0071266":null,"GO:1901705":null}}


id: GO:0042696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of the menstrual cycle; the first menstrual cycle in an individual.","definition_xrefs":["GOC:curators","PMID:16311040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menarche","secondary_identifiers":["Wikipedia:Menarche"],"termid":"GO:0042696"}


id: PBO:0064313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 2","termid":"PBO:0064313"}


id: MONDO:0007359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commissural lip pits","secondary_identifiers":["OMIM:120500","SCTID:109550008","MEDGEN:98001","UMLS:C0399605"],"synonyms":[{"name":"commissural lip pits","type":"exact"}],"termid":"MONDO:0007359","xrefs":{"Monarch":{"xref_id":"0007359"}}}


id: PBO:0047761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor gamma","termid":"PBO:0047761"}


id: MONDO:0032862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital communicating, 1","secondary_identifiers":["GARD:18090","OMIM:618667","MEDGEN:1684770","UMLS:C5231454"],"synonyms":[{"name":"HYDCC1","type":"related"},{"name":"HYDROCEPHALUS, CONGENITAL COMMUNICATING, 1","type":"related"}],"termid":"MONDO:0032862","xrefs":{"Monarch":{"xref_id":"0032862"}}}


id: GO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism part","termid":"GO:0044217"}


id: GO:0006617
data:
  {"annotated_genes":["SJAG_01759","SJAG_01282","SJAG_02456"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93524,116388,117151],"is_not":false,"summary":null,"term":"GO:0006617"}]},"cv_name":"biological_process","definition":"The process in which SRP binds to the signal peptide in a nascent protein, causing protein elongation to pause, during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_02456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0006605","GO:0044085"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence recognition","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence recognition","type":"exact"},{"name":"signal sequence recognition during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006617","terms_by_termid":{"GO:0006617":null}}


id: PBO:0109381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 12","termid":"PBO:0109381"}


id: GO:0031669
data:
  {"annotated_genes":["SJAG_02973","SJAG_04873","SJAG_00534","SJAG_00781","SJAG_02474","SJAG_03519","SJAG_01970","SJAG_04677","SJAG_04743","SJAG_02785","SJAG_02878","SJAG_03371","SJAG_00380","SJAG_03309","SJAG_02424","SJAG_04032","SJAG_02699","SJAG_04067","SJAG_00169","SJAG_01509","SJAG_02389","SJAG_00209","SJAG_01885","SJAG_00233","SJAG_00256","SJAG_00845","SJAG_01184","SJAG_04031","SJAG_03048","SJAG_03602","SJAG_01245","SJAG_03486","SJAG_00457","SJAG_02380","SJAG_02026","SJAG_02292","SJAG_02331"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62860,75763,77677,96585,75417,73295,73898,97136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[77827,77860,71766,58897,100351,102375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[96006,59554,102424,79501,114804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[115349,109549,115350,73998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[78965,82224,78218,73388,96533,74295,80126,76491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[117609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[68112,71107],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903833"},{"annotations":[89717,103334],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[104335],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01885":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02380":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_02878":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03602":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nutrient levels","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0031669","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1903833":null,"GO:1904547":null,"GO:1905287":null}}


id: PBO:0109641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M (pseudogene)","termid":"PBO:0109641"}


id: PBO:0082562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone and import receptor for newly-synthesized class I PMPs; binds peroxisomal membrane proteins (PMPs) in the cytoplasm and delivers them to the peroxisome for subsequent insertion into the peroxisomal membrane; interacts with Myo2p and contributes to peroxisome partitioning","termid":"PBO:0082562"}


id: PBO:0035699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_plus-end_during_mitotic_interphase","termid":"PBO:0035699"}


id: PBO:0090450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl1","termid":"PBO:0090450"}


id: PBO:0027630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere","termid":"PBO:0027630"}


id: PBO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rix1 (predicted)","termid":"PBO:0005132"}


id: GO:1900788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A metabolic process","synonyms":[{"name":"Pseurotin metabolic process","type":"related"},{"name":"Pseurotin metabolism","type":"related"},{"name":"pseurotin A metabolism","type":"exact"}],"termid":"GO:1900788"}


id: PBO:0116192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog Bsd1","termid":"PBO:0116192"}


id: MONDO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a uterus.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterus carcinoma in situ","secondary_identifiers":["UMLS:C0686237","DOID:9108","ICD9:233.2","MEDGEN:673127","SCTID:92788005"],"synonyms":[{"name":"carcinoma in situ of uterus","type":"exact"},{"name":"stage 0 uterus carcinoma","type":"exact"},{"name":"uterus in situ carcinoma","type":"exact"}],"termid":"MONDO:0004710","xrefs":{"Monarch":{"xref_id":"0004710"}}}


id: GO:1901751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene A4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene A4 metabolic process","synonyms":[{"name":"leukotriene A4 metabolism","type":"exact"}],"termid":"GO:1901751"}


id: PR:O13874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.09c gene.","definition_xrefs":["UniProtKB:O13874","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized NOC2 family protein C1B3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.09c","synonyms":[{"name":"Spom972h-SPAC1B3.09c","type":"exact"}],"termid":"PR:O13874"}


id: PBO:0085125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; required for 35S pre-RNA processing and 40S ribosomal subunit biogenesis","termid":"PBO:0085125"}


id: PBO:0029429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0029429"}


id: PBO:0073306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 2","termid":"PBO:0073306"}


id: MONDO:1011595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets, pig","secondary_identifiers":["OMIA:002364-9823"],"termid":"MONDO:1011595","xrefs":{"Monarch":{"xref_id":"1011595"}}}


id: MOD:01931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-phospho-L-lysine.","definition_xrefs":["PubMed:20144148","RESID:AA0585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N6-phospho-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"6-phospholysine","type":"exact"},{"name":"N(6)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phospholysine","type":"exact"},{"name":"N(epsilon)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phosphonyllysine","type":"exact"},{"name":"N(epsilon)-phosphoryllysine","type":"exact"},{"name":"N6-phospho-L-lysine","type":"exact"}],"termid":"MOD:01931"}


id: MONDO:0006869
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Goiter characterized by discrete tissue mass(es) that may or may not produce thyroid hormones.","definition_xrefs":["NCIT:C131437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"nodular goiter","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0005994","SCTID:419153005","MEDGEN:42271","MESH:D006044","EFO:1001062","UMLS:C0018023","DOID:13197","MedDRA:10018495"],"synonyms":[{"name":"goiter, nodular","type":"exact"},{"name":"nodular goiter","type":"exact"},{"name":"nodular goiter (disease)","type":"exact"},{"name":"nodular goitre (disease)","type":"exact"},{"name":"nodular goitre NOS","type":"related"}],"termid":"MONDO:0006869","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0006869"}}}


id: FYPO:0002572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dTTP level","synonyms":[{"name":"decreased cellular dTTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dTTP level during vegetative growth","type":"exact"},{"name":"reduced cellular dTTP level","type":"exact"}],"termid":"FYPO:0002572"}


id: MONDO:0011587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 15q21-q22.","definition_xrefs":["DOID:0110254","PMID:11133359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset sutural cataract","termid":"MONDO:0020372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 25","secondary_identifiers":["UMLS:C1854021","MESH:C565301","OMIM:605728","GARD:18232","MEDGEN:340116"],"synonyms":[{"name":"CCSSO","type":"exact"},{"name":"CTRCT25","type":"exact"},{"name":"cataract 25","type":"exact"},{"name":"cataract type 25","type":"exact"},{"name":"cataract, central pouch-like, with sutural opacities","type":"related"},{"name":"cataract, central saccular, with sutural opacities","type":"related"},{"name":"central pouch-like cataract with sutural opacities","type":"exact"},{"name":"central saccular cataract with sutural opacities","type":"exact"}],"termid":"MONDO:0011587","xrefs":{"Monarch":{"xref_id":"0011587"}}}


id: PBO:0012270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 7 (predicted)","termid":"PBO:0012270"}


id: PBO:0038870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 1","termid":"PBO:0038870"}


id: MONDO:0019069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rhabdoid tumor (obsolete MONDO:0019069)","termid":"MONDO:0019069","xrefs":{"Monarch":{"xref_id":"0019069"}}}


id: PBO:0060447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD synthetase 1","termid":"PBO:0060447"}


id: PBO:0047849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p32)","termid":"PBO:0047849"}


id: PATO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being smallest in amount, extent or degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minimal","termid":"PATO:0002123"}


id: MONDO:0011021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal intestinal dysplasia","termid":"MONDO:0000858"},{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neuronal intestinal dysplasia, type B","secondary_identifiers":["UMLS:C1832589","OMIM:601223","DOID:0080680","MEDGEN:318658"],"synonyms":[{"name":"NID B","type":"exact"},{"name":"neuronal intestinal dysplasia, type B","type":"exact"}],"termid":"MONDO:0011021","xrefs":{"Monarch":{"xref_id":"0011021"}}}


id: PBO:0056059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich adaptor protein 1 like","termid":"PBO:0056059"}


id: MONDO:0004275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcomatous transformation of pre-existing Paget disease of the bone. Osteosarcomas arising from Paget disease of the bone are high grade lesions and usually have a poor prognosis.","definition_xrefs":["NCIT:C6469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"bone osteosarcoma","termid":"MONDO:0002629"},{"relation_name":"is_a","term_name":"Paget disease","termid":"MONDO:0021165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"osteosarcoma arising in bone Paget disease","secondary_identifiers":["ICDO:9184/3","MEDGEN:569679","UMLS:C0334546","DOID:7542"],"synonyms":[{"name":"Paget osteosarcoma","type":"exact"},{"name":"Paget's osteosarcoma","type":"exact"},{"name":"osteosarcoma arising in Paget disease of bone","type":"exact"},{"name":"osteosarcoma arising in Paget's disease of bone","type":"exact"},{"name":"osteosarcoma arising in bone Paget disease","type":"exact"},{"name":"osteosarcoma arising in bone Paget's disease","type":"exact"},{"name":"osteosarcoma arising in osseous Paget's disease","type":"exact"},{"name":"osteosarcoma arising in osteitis deformans","type":"exact"}],"termid":"MONDO:0004275","xrefs":{"Monarch":{"xref_id":"0004275"}}}


id: PBO:0052887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-10, pseudogene","termid":"PBO:0052887"}


id: SO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a DNA molecule where transfer is initiated during the process of conjugation or mobilization.","direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriT","secondary_identifiers":["http://en.wikipedia.org/wiki/Origin_of_transfer"],"synonyms":[{"name":"INSDC_feature:oriT","type":"exact"},{"name":"origin of transfer","type":"exact"}],"termid":"SO:0000724"}


id: MONDO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute orbital inflammation","termid":"MONDO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital tenonitis","secondary_identifiers":["SCTID:8976003","UMLS:C0155259","MEDGEN:509879","DOID:11233","ICD9:376.04"],"synonyms":[{"name":"tenonitis","type":"exact"}],"termid":"MONDO:0001233","xrefs":{"Monarch":{"xref_id":"0001233"}}}


id: MONDO:0054868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Small intestinal obstruction that results from the impaction of thick meconium in the distal small intestine.","definition_xrefs":["NCIT:C98979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileus","termid":"MONDO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"meconium ileus","secondary_identifiers":["MESH:D000074270","SCTID:206523001","MEDGEN:473705","UMLS:C2939175"],"synonyms":[{"name":"meconium ileus","type":"exact"}],"termid":"MONDO:0054868","xrefs":{"Monarch":{"xref_id":"0054868"}}}


id: GO:0070420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonhomologous end joining complex that contains one or more Ku monomers and one or more DNA ligase molecules from the LigC or LigD family, and mediates nonhomologous end joining in bacteria.","definition_xrefs":["GOC:mah","PMID:17938628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ku-DNA ligase complex","termid":"GO:0070420"}


id: PBO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.11.1.-","termid":"PBO:0003122"}


id: GO:0018930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylquinoline, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylquinoline metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mqn"],"synonyms":[{"name":"2-methylquinoline metabolic process","type":"narrow"},{"name":"2-methylquinoline metabolism","type":"narrow"},{"name":"3-methylquinoline metabolic process","type":"narrow"},{"name":"3-methylquinoline metabolism","type":"narrow"},{"name":"quinaldine metabolic process","type":"narrow"},{"name":"quinaldine metabolism","type":"narrow"}],"termid":"GO:0018930"}


id: PBO:0027325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027325"}


id: PBO:0028617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2_snRNP_binding","termid":"PBO:0028617"}


id: PBO:0073200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3A","termid":"PBO:0073200"}


id: PBO:0063069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 2","termid":"PBO:0063069"}


id: PBO:0072308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 5","termid":"PBO:0072308"}


id: PBO:0059799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 25","termid":"PBO:0059799"}


id: GO:0010515
data:
  {"annotated_genes":["SJAG_04312","SJAG_00472","SJAG_01311","SJAG_02444","SJAG_02592","SJAG_01254","SJAG_03081","SJAG_01699","SJAG_00975","SJAG_02723","SJAG_02266","SJAG_02730","SJAG_00526","SJAG_04026","SJAG_00600","SJAG_01084","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90074,93298,94820,96124,96266,102479,103794,106457,107777,107874,108469,108623,108819,111001,116488,117555,118091],"is_not":false,"summary":null,"term":"GO:0010515"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency or rate of initiation of conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of conjugation with cellular fusion","termid":"GO:0031138"},{"relation_name":"negatively_regulates","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01699":null,"SJAG_02266":null,"SJAG_02444":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"negatively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"negative regulation of induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010515","terms_by_termid":{"GO:0010515":null}}


id: GO:0036123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 dimethylation (obsolete GO:0036123)","synonyms":[{"name":"histone H3 K9 dimethylation","type":"exact"},{"name":"histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:0036123"}


id: GO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase IV transcription regulator complex","synonyms":[{"name":"RNA polymerase IV transcription factor complex","type":"narrow"}],"termid":"GO:0090577"}


id: PBO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 4","termid":"PBO:0061486"}


id: PBO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup120","termid":"PBO:0004776"}


id: PBO:0084702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glyoxalase II; catalyzes the hydrolysis of S-D-lactoylglutathione into glutathione and D-lactate; GLO4 has a paralog, GLO2, that arose from the whole genome duplication","termid":"PBO:0084702"}


id: GO:0034135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"regulation of TLR2 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034135"}


id: MONDO:0957519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stomach cancer that is characterized by development of diffuse (signet ring cell) gastric cancer underneath the stomach lining.","definition_xrefs":["DOID:0080763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"diffuse gastric cancer","termid":"MONDO:0957519","xrefs":{"Monarch":{"xref_id":"0957519"}}}


id: GO:0015636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of short-chain fatty acids from one side of a membrane to the other. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"short-chain fatty acid transmembrane transporter activity","secondary_identifiers":["GO:0015635"],"synonyms":[{"name":"short-chain fatty acid transporter activity","type":"related"},{"name":"short-chain fatty acid uptake transporter activity","type":"related"}],"termid":"GO:0015636"}


id: MONDO:0007495
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86879],"is_not":false,"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"An autosomal dominant dopa-responsive dystonia in which the cause of the disease is a variation in the GCH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase I deficiency","termid":"MONDO:0100184"},{"relation_name":"is_a","term_name":"autosomal dominant dopa-responsive dystonia","termid":"MONDO:0971063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"dystonia 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200516","UMLS:C1851920","NORD:1702","DOID:0090043","MEDGEN:342121","OMIM:128230","SCTID:715768000","GARD:9817"],"synonyms":[{"name":"DRD","type":"related"},{"name":"DYT-GCH1","type":"exact"},{"name":"Dopa-responsive dystonia, autosomal dominant","type":"exact"},{"name":"Dopa-responsive dystonia; Segawa syndrome AD","type":"related"},{"name":"GTP cyclohydrolase 1-deficient dopa-responsive dystonia","type":"exact"},{"name":"Segawa Syndrome","type":"exact"},{"name":"Segawa syndrome, autosomal dominant","type":"exact"},{"name":"dystonia 5","type":"exact"},{"name":"dystonia type 5","type":"exact"},{"name":"dystonia, DOPA-responsive","type":"related"},{"name":"dystonia, DOPA-responsive, with or without hyperphenylalaninemia","type":"exact"},{"name":"dystonia, Dopa-responsive, autosomal dominant","type":"exact"},{"name":"dystonia, progressive, with diurnal variation","type":"exact"},{"name":"dystonia-Parkinsonism with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0007495","terms_by_termid":{"MONDO:0007495":null},"xrefs":{"Monarch":{"xref_id":"0007495"}}}


id: GO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[protein] + L-lysyl-[protein] = [protein]-L-lysyl-N(6)-5-L-glutamyl-[protein] + NH4+. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links.","definition_xrefs":["EC:2.3.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-glutamine gamma-glutamyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6810894","RESID:AA0124","Reactome:R-HSA-140851","RHEA:54816","MetaCyc:2.3.2.13-RXN"],"synonyms":[{"name":"R-glutaminyl-peptide:amine gamma-glutamyl transferase activity","type":"related"},{"name":"TGase activity","type":"exact"},{"name":"factor XIIIa","type":"related"},{"name":"fibrin stabilizing factor","type":"related"},{"name":"fibrinoligase activity","type":"exact"},{"name":"glutaminylpeptide gamma-glutamyltransferase activity","type":"related"},{"name":"polyamine transglutaminase activity","type":"related"},{"name":"protein-glutamine:amine gamma-glutamyltransferase","type":"related"},{"name":"tissue transglutaminase","type":"narrow"},{"name":"transglutaminase activity","type":"exact"}],"termid":"GO:0003810"}


id: GO:1905718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic spindle astral microtubule end (obsolete GO:1905718)","synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905718"}


id: MONDO:0013996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal facial dermal dysplasia type II (FFDD2) is a focal facial dermal dysplasia (FFDD), characterized by congenital bitemporal scar-like depressions and other facial and organ abnormalities.","definition_xrefs":["Orphanet:398173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal facial dermal dysplasia type III","termid":"MONDO:0009203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia type II","secondary_identifiers":["NORD:1704","OMIM:614973","UMLS:C3554245","GARD:17649","MEDGEN:767159"],"synonyms":[{"name":"Brauer-Setleis syndrome","type":"related"},{"name":"FFDD type II","type":"exact"},{"name":"FFDD2","type":"exact"},{"name":"Setleis Syndrome","type":"exact"},{"name":"focal facial dermal dysplasia 2, Brauer-Setleis type","type":"exact"}],"termid":"MONDO:0013996","xrefs":{"Monarch":{"xref_id":"0013996"}}}


id: GO:0008191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"metalloendopeptidase inhibitor activity","synonyms":[{"name":"metalloprotease inhibitor","type":"narrow"},{"name":"metalloproteinase inhibitor","type":"narrow"}],"termid":"GO:0008191"}


id: GO:2000890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"dextrin catabolic process","termid":"GO:1901027"},{"relation_name":"is_a","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellodextrin catabolic process","synonyms":[{"name":"cellodextrin catabolism","type":"exact"}],"termid":"GO:2000890"}


id: MONDO:0011279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation between D7S2453 and D7S525 in the chromosome region 7q31.","definition_xrefs":["PMID:15293785","DOID:0110472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 17","secondary_identifiers":["GARD:22593","OMIM:603010","MESH:C566418","MEDGEN:355180","UMLS:C1864276"],"synonyms":[{"name":"DFNB17","type":"narrow"},{"name":"autosomal recessive deafness 17","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 17","type":"narrow"},{"name":"deafness, autosomal recessive 17","type":"narrow"}],"termid":"MONDO:0011279","xrefs":{"Monarch":{"xref_id":"0011279"}}}


id: FYPO:0003367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize pyridoxine, and therefore requires pyridoxine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for pyridoxine","synonyms":[{"name":"growth auxotrophic for pyridoxine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for pyridoxine during vegetative growth","type":"exact"},{"name":"pyridoxine auxotrophy","type":"exact"}],"termid":"FYPO:0003367"}


id: PR:Q10073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.08c gene.","definition_xrefs":["UniProtKB:Q10073","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized CCDC90 family protein C3H1.08c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.08c","synonyms":[{"name":"Spom972h-SPAC3H1.08c","type":"exact"}],"termid":"PR:Q10073"}


id: GO:0008466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin. This first reaction is a self glucosylation. Further UDP-glucose goups are added to the [1,4-alpha-D-glucosyl](n) group of glycogenin until a length of about 5-13 residues.","definition_xrefs":["EC:2.4.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glycogenin glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3322014","Reactome:R-HSA-3322019","GO:0047210","Reactome:R-HSA-3322003","Reactome:R-HSA-3322025","Reactome:R-HSA-3814838"],"synonyms":[{"name":"1,4alpha-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"UDP-alpha-D-glucose:glycogenin alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:glycogenin glucosyltransferase activity","type":"related"},{"name":"alpha-1,4-glucan-protein synthase (UDP-forming) activity","type":"exact"},{"name":"glycogenin activity","type":"related"},{"name":"priming glucosyltransferase activity","type":"related"}],"termid":"GO:0008466"}


id: SO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that leads to a change in the location of a termination codon in a transcript but allows the transcript to escape nonsense-mediated decay (NMD). The change in location of a termination codon can be caused by several different types of sequence variants, including stop_gained (SO:0001587), frameshift_variant (SO:0001589), splice_donor_variant (SO:0001575), and splice_acceptor_variant (SO:0001574) types of variants.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD_escaping_variant","synonyms":[{"name":"NMD escaping variant","type":"exact"},{"name":"nonsense-mediated decay escaping variant","type":"exact"}],"termid":"SO:0002320"}


id: PBO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2","termid":"PBO:0061465"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: PR:Q9UTT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.02c","synonyms":[{"name":"Spom972h-ubp15","type":"exact"},{"name":"deubiquitinating enzyme 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTT1"}


id: MONDO:0010716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of lethal multiple pterygium syndrome.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"lethal multiple pterygium syndrome","termid":"MONDO:0009668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked lethal multiple pterygium syndrome","secondary_identifiers":["OMIM:312150","Orphanet:79447","UMLS:C1839440","SCTID:763462004","MEDGEN:374225","GARD:4573","MESH:C564072"],"synonyms":[{"name":"lethal multiple pterygium syndrome, X-linked","type":"exact"},{"name":"multiple pterygium syndrome X-linked","type":"related"},{"name":"multiple pterygium syndrome, X-linked","type":"related"},{"name":"pterygium syndrome multiple X-linked","type":"related"},{"name":"pterygium syndrome, multiple, X-linked","type":"related"}],"termid":"MONDO:0010716","xrefs":{"Monarch":{"xref_id":"0010716"}}}


id: MONDO:0000531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the bronchus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchogenic carcinoma","termid":"MONDO:0002806"},{"relation_name":"is_a","term_name":"pulmonary mucoepidermoid carcinoma","termid":"MONDO:0005616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus mucoepidermoid carcinoma","secondary_identifiers":["DOID:0050916"],"synonyms":[{"name":"bronchus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0000531","xrefs":{"Monarch":{"xref_id":"0000531"}}}


id: GO:0034725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of nucleosomes on newly replicated DNA, coupled to strand elongation.","definition_xrefs":["GOC:mah","PMID:17510629"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication-dependent nucleosome disassembly (obsolete GO:0034725)","synonyms":[{"name":"DNA replication-dependent chromatin disassembly","type":"exact"}],"termid":"GO:0034725"}


id: PBO:0027154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glycine_level","termid":"PBO:0027154"}


id: MONDO:0012772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stevenson-Carey syndrome","secondary_identifiers":["UMLS:C2677763","MESH:C567446","OMIM:611961","MEDGEN:383183"],"synonyms":[{"name":"Stevenson-Carey syndrome","type":"exact"}],"termid":"MONDO:0012772","xrefs":{"Monarch":{"xref_id":"0012772"}}}


id: PBO:0062736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 3 pseudogene","termid":"PBO:0062736"}


id: MONDO:0022566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete BEST1 retinopathy (obsolete MONDO:0022566)","termid":"MONDO:0022566","xrefs":{"Monarch":{"xref_id":"0022566"}}}


id: PBO:0005682
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.5","termid":"PBO:0005682"}


id: PBO:0028814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_primary_amine_oxidase_activity","termid":"PBO:0028814"}


id: PBO:0090751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho5","termid":"PBO:0090751"}


id: MONDO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of two or more identities with distinct patterns of perception and personality which recurrently take control of the person's behavior; this is accompanied by a retrospective gap in memory of important personal information that far exceeds ordinary forgetfulness. The changes in identity are not due to substance use or to a general medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple personality disorder","secondary_identifiers":["MEDGEN:44520","NCIT:C94330","UMLS:C0026773","ICD9:300.14","SCTID:31611000","MESH:D009105","DOID:10934","ICD10CM:F44.81"],"synonyms":[{"name":"dissociative identity disorder","type":"exact"}],"termid":"MONDO:0001159","xrefs":{"Monarch":{"xref_id":"0001159"}}}


id: PBO:0038304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"db_date_version","termid":"PBO:0038304"}


id: MONDO:0019416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-hypogammaglobulinemia-progressive neurological deterioration syndrome is characterized by moderate intellectual deficit, bilateral single palmar creases, seizures, variable hypogammaglobulinemia and characteristic features (synophrys, prognathism, and hirsutism). It has been reported in three males from two generations of one family. All underwent progressive neurological deterioration. This syndrome is transmitted as an X-linked trait, and the causative gene is located between Xq21.33 and Xq23.","definition_xrefs":["Orphanet:85317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability-hypogammaglobulinemia-progressive neurological deterioration syndrome","secondary_identifiers":["MEDGEN:930588","UMLS:C4304919","GARD:19053"],"termid":"MONDO:0019416","xrefs":{"Monarch":{"xref_id":"0019416"}}}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:tb","GOC:ecd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: GO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of inner ear epithelial cells, resulting the aggregation of otolith seed particles.","definition_xrefs":["GOC:krc","PMID:19043402","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"part_of","term_name":"otolith formation","termid":"GO:0032475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cilium movement involved in otolith formation","termid":"GO:0003355"}


id: GO:1901096
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagosome maturation.","definition_xrefs":["PMID:21383079","GOC:autophagy","GOC:TermGenie","PMID:10436019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of autophagosome maturation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902452"],"synonyms":[{"name":"regulation of amphisome-lysosome fusion","type":"narrow"},{"name":"regulation of autolysosome formation","type":"narrow"},{"name":"regulation of autophagic vacuole fusion","type":"exact"},{"name":"regulation of autophagosome fusion","type":"exact"},{"name":"regulation of fusion of autophagosome with lysosome","type":"narrow"}],"termid":"GO:1901096","terms_by_termid":{"GO:1901098":null}}


id: GO:2000497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000497"}


id: GO:1901759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-L-Ara4N-lipid A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:19166326","PMID:17928292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-L-Ara4N-lipid A metabolic process","synonyms":[{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A metabolic process","type":"exact"},{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A metabolism","type":"exact"},{"name":"beta-L-Ara4N-lipid A metabolism","type":"exact"}],"termid":"GO:1901759"}


id: PBO:0078076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 2","termid":"PBO:0078076"}


id: PBO:0076397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 1","termid":"PBO:0076397"}


id: MONDO:0011943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with nephritis, susceptibility to, 2","secondary_identifiers":["OMIM:607966","UMLS:C1842756","MEDGEN:375006"],"synonyms":[{"name":"SLEN2","type":"exact"},{"name":"systemic lupus erythematosus with nephritis, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0011943","xrefs":{"Monarch":{"xref_id":"0011943"}}}


id: PBO:0056791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF divergent transcript","termid":"PBO:0056791"}


id: PBO:0080330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 94 pseudogene","termid":"PBO:0080330"}


id: PBO:0034588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_galactose-specific_flocculation","termid":"PBO:0034588"}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: PBO:0053442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 388","termid":"PBO:0053442"}


id: PBO:0042665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 21","termid":"PBO:0042665"}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: PBO:0027824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_mitotic_spindle","termid":"PBO:0027824"}


id: GO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell fate commitment","termid":"GO:0072151"},{"relation_name":"part_of","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"}


id: MONDO:1012517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exercise induced metabolic myopathy, non-human animal","termid":"MONDO:1011805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exercise induced metabolic myopathy, dog","secondary_identifiers":["OMIA:002140-9615"],"termid":"MONDO:1012517","xrefs":{"Monarch":{"xref_id":"1012517"}}}


id: PBO:0046604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 6","termid":"PBO:0046604"}


id: PBO:0087557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Rtc1p, along with Mtc5p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; has N-terminal WD-40 repeats and a C-terminal RING motif; null suppresses cdc13-1","termid":"PBO:0087557"}


id: PBO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 2","termid":"PBO:0043630"}


id: MONDO:0003510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor predominantly affecting young men and often associated with cryptorchidism. Seminoma is the most frequently seen malignant testicular germ cell tumor, followed by embryonal carcinoma and yolk sac tumor.","definition_xrefs":["NCIT:C9063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant testicular germ cell tumor","secondary_identifiers":["DOID:5556","UMLS:C0855197","SCTID:713646001","ICD9:186.9","MEDGEN:163616"],"synonyms":[{"name":"malignant germ cell neoplasm of testis","type":"exact"},{"name":"malignant germ cell neoplasm of the testis","type":"exact"},{"name":"malignant germ cell tumor of testis","type":"exact"},{"name":"malignant germ cell tumor of the testis","type":"exact"},{"name":"malignant germ cell tumour of testis","type":"exact"},{"name":"malignant germ cell tumour of the testis","type":"exact"},{"name":"malignant testicular germ cell neoplasm","type":"exact"},{"name":"malignant testicular germ cell tumor","type":"exact"},{"name":"testicular ca. (no germ/tropho.)","type":"exact"},{"name":"testicular cancer","type":"broad"},{"name":"testicular cancer (excluding germ cell or trophoblastic cancer)","type":"exact"},{"name":"testicular germ cell cancer","type":"exact"},{"name":"testicular malignant germ cell cancer","type":"related"}],"termid":"MONDO:0003510","xrefs":{"Monarch":{"xref_id":"0003510"}}}


id: PBO:0065148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1","termid":"PBO:0065148"}


id: PBO:0082916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b reductase and NADH-dependent reductase for Dph3p; required for diphthamide synthesis and tRNA wobble uridine modification; also detected in mitochondria; mutation in conserved NADH binding domain of the human ortholog results in type I methemoglobinemia","termid":"PBO:0082916"}


id: PBO:0075290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 30","termid":"PBO:0075290"}


id: PBO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 41","termid":"PBO:0060053"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: PBO:0041511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 178","termid":"PBO:0041511"}


id: GO:1900060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:15302821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sphingolipid biosynthetic process","termid":"GO:0090155"},{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"negatively_regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of ceramide biosynthetic process","synonyms":[{"name":"down regulation of ceramide anabolism","type":"exact"},{"name":"down regulation of ceramide biosynthesis","type":"exact"},{"name":"down regulation of ceramide biosynthetic process","type":"related"},{"name":"down regulation of ceramide formation","type":"exact"},{"name":"down regulation of ceramide synthesis","type":"exact"},{"name":"down-regulation of ceramide anabolism","type":"exact"},{"name":"down-regulation of ceramide biosynthesis","type":"exact"},{"name":"down-regulation of ceramide biosynthetic process","type":"related"},{"name":"down-regulation of ceramide formation","type":"exact"},{"name":"down-regulation of ceramide synthesis","type":"exact"},{"name":"downregulation of ceramide anabolism","type":"exact"},{"name":"downregulation of ceramide biosynthesis","type":"exact"},{"name":"downregulation of ceramide biosynthetic process","type":"related"},{"name":"downregulation of ceramide formation","type":"exact"},{"name":"downregulation of ceramide synthesis","type":"exact"},{"name":"inhibition of ceramide anabolism","type":"exact"},{"name":"inhibition of ceramide biosynthesis","type":"exact"},{"name":"inhibition of ceramide biosynthetic process","type":"related"},{"name":"inhibition of ceramide formation","type":"exact"},{"name":"inhibition of ceramide synthesis","type":"exact"},{"name":"negative regulation of ceramide anabolism","type":"exact"},{"name":"negative regulation of ceramide biosynthesis","type":"exact"},{"name":"negative regulation of ceramide formation","type":"exact"},{"name":"negative regulation of ceramide synthesis","type":"exact"}],"termid":"GO:1900060"}


id: PBO:0051540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6 antisense RNA 1","termid":"PBO:0051540"}


id: FYPO:0001204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells enter mitosis earlier or later than normal, relative to cell size or DNA integrity checkpoint status.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"mistimed mitosis","synonyms":[{"name":"abnormal onset of mitosis","type":"exact"},{"name":"mistimed mitosis during mitotic cell cycle","type":"related"},{"name":"mistimed mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0001204"}


id: MONDO:0054677
data:
  {"annotated_genes":["SJAG_03104","SJAG_03155"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87052,87053],"is_not":false,"summary":null,"term":"MONDO:0054677"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03104":null,"SJAG_03155":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C174440","MEDGEN:1623699","UMLS:C4540209","DOID:0111495","OMIM:617713"],"synonyms":[{"name":"COXPD33","type":"related"},{"name":"combined oxidative phosphorylation deficiency 33","type":"exact"}],"termid":"MONDO:0054677","terms_by_termid":{"MONDO:0054677":null},"xrefs":{"Monarch":{"xref_id":"0054677"}}}


id: PBO:0053251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX4 antisense RNA 1","termid":"PBO:0053251"}


id: PBO:0034715
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage-hair hypoplasia","termid":"PBO:0034715"}


id: GO:1902978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"premeiotic DNA replication termination","synonyms":[{"name":"DNA replication termination involved in meiotic DNA replication","type":"exact"},{"name":"DNA replication termination involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902978"}


id: GO:1901264
data:
  {"annotated_genes":["SJAG_00612","SJAG_00339","SJAG_04162","SJAG_01960","SJAG_03334","SJAG_03774","SJAG_04697","SJAG_00434","SJAG_02897","SJAG_00276","SJAG_02050","SJAG_04406","SJAG_01177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[95230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[73555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[78834,96322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[103305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[59112,104804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[114265,95002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[76622,90239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[77774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[76826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[114381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[79365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[67583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02897":null,"SJAG_03334":null,"SJAG_03774":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"carbohydrate derivative transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901264","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0034203":null,"GO:0035436":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein-specific kinase Dsk1","termid":"PBO:0003355"}


id: PBO:0058443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5008","termid":"PBO:0058443"}


id: FYPO:0007736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 5' end, and less at the 3' end, than normal during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"condensin displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"decreased protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase with increased localization towards 5' end","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during metaphase of mitotic cell cycle","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during vegetative growth","type":"exact"},{"name":"protein displaced from downstream end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007736"}


id: MONDO:0017491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, bilateral","secondary_identifiers":["Orphanet:295079","MEDGEN:1776601","UMLS:C5438440","icd11.foundation:1562926182"],"synonyms":[{"name":"tibial longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017491","xrefs":{"Monarch":{"xref_id":"0017491"}}}


id: GO:0042324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an orexin receptor.","definition_xrefs":["GOC:ceb","PMID:11988773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"orexin receptor binding","synonyms":[{"name":"hypocretin receptor binding","type":"exact"},{"name":"hypocretin receptor ligand","type":"narrow"},{"name":"orexin receptor ligand","type":"narrow"}],"termid":"GO:0042324"}


id: FYPO:0005143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which proteasome core complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abolished proteasome core complex binding","synonyms":[{"name":"proteasome core complex binding abolished","type":"exact"}],"termid":"FYPO:0005143"}


id: GO:0046827
data:
  {"annotated_genes":["SJAG_01245","SJAG_04312","SJAG_01805","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95702,102377,103797,113014],"is_not":false,"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"positively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein export from nucleus","type":"narrow"},{"name":"positive regulation of protein export from cell nucleus","type":"exact"},{"name":"positive regulation of protein export out of nucleus","type":"exact"},{"name":"positive regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of protein-nucleus export","type":"exact"},{"name":"stimulation of protein export from nucleus","type":"narrow"},{"name":"up regulation of protein export from nucleus","type":"exact"},{"name":"up-regulation of protein export from nucleus","type":"exact"},{"name":"upregulation of protein export from nucleus","type":"exact"}],"termid":"GO:0046827","terms_by_termid":{"GO:0046827":null}}


id: PBO:0063621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, muscle","termid":"PBO:0063621"}


id: PR:O74524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline dehydrogenase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.03c","secondary_identifiers":["UniProtKB:O74524"],"synonyms":[{"name":"Spom972h-PRODH2","type":"exact"},{"name":"proline oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74524"}


id: MONDO:0021636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.","definition_xrefs":["NCIT:C6958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytic tumor","secondary_identifiers":["DOID:3069","Orphanet:94","GARD:12928","MedDRA:10003571"],"synonyms":[{"name":"astrocytic neoplasm","type":"exact"},{"name":"astrocytic tumor","type":"exact"},{"name":"astrocytoma","type":"narrow"},{"name":"astrocytoma of brain","type":"exact"},{"name":"astrocytoma of cerebrum","type":"narrow"},{"name":"astrocytoma, no ICD-O subtype","type":"exact"},{"name":"astroglioma","type":"exact"}],"termid":"MONDO:0021636","xrefs":{"Monarch":{"xref_id":"0021636"}}}


id: PBO:0111807
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRI subfamily","termid":"PBO:0111807"}


id: MONDO:0008888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Williams-Campbell syndrome","secondary_identifiers":["UMLS:C0340231","NANDO:2201040","SCTID:54203008","icd11.foundation:766574679","ICD9:748.3","Orphanet:411501","MEDGEN:137939","OMIM:211450","GARD:21731"],"synonyms":[{"name":"BRONCHOMALACIA","type":"related"},{"name":"Williams-Campbell syndrome","type":"exact"}],"termid":"MONDO:0008888","xrefs":{"Monarch":{"xref_id":"0008888"}}}


id: PBO:0079609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 H","termid":"PBO:0079609"}


id: PBO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8B","termid":"PBO:0043665"}


id: PBO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 4B","termid":"PBO:0039576"}


id: PBO:0034483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_histone_H2B-K119_ubiquitination_at_double-strand_break_site","termid":"PBO:0034483"}


id: PBO:0113123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential chromatin-associated protein; involved in initiation of DNA replication; promotes origin duplex unwinding by head-to-head CMG helicase complexes; required for association of MCM2-7 complex with replication origins; required to stabilize the catalytic subunit of DNA polymerase-alpha; coordinates function of the replication fork helicase; self-associates through its N-terminal domain","termid":"PBO:0113123"}


id: FYPO:0002585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is too low to detect. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature mitochondrial tRNA level","termid":"FYPO:0002584"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"mature mitochondrial tRNA absent from cell","synonyms":[{"name":"mature mitochondrial tRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mature mitochondrial tRNA absent from cell during vegetative growth","type":"exact"},{"name":"mature mitochondrial tRNA transcripts absent from cell","type":"exact"},{"name":"mature mitochondrial transfer RNA absent from cell","type":"exact"},{"name":"mitochondrial tRNA absent from cell","type":"broad"},{"name":"undetectable mature mitochondrial tRNA level","type":"exact"}],"termid":"FYPO:0002585"}


id: PBO:0080984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 20","termid":"PBO:0080984"}


id: PBO:0090749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain-like containing protein, implicated in vesicle formation/trafficking","termid":"PBO:0090749"}


id: MONDO:0008618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dwarfism, Reinhardt-Pfeiffer type is characterized by disproportionate short stature from birth with dysplasia of the ulna and fibula.","definition_xrefs":["Orphanet:2634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dwarfism, Reinhardt-Pfeiffer type","secondary_identifiers":["UMLS:C1860616","icd11.foundation:1393171517","MEDGEN:395935","OMIM:191400","SCTID:715472000","MESH:C537349","GARD:3555"],"synonyms":[{"name":"Reinhardt-Pfeiffer mesomelic dysplasia","type":"exact"},{"name":"Reinhardt-Pfeiffer syndrome","type":"exact"},{"name":"hypoplasia of ulna and fibula","type":"related"},{"name":"mesomelic dwarfism of hypoplastic ulna and fibula type","type":"related"},{"name":"mesomelic dysplasia Reinhardt-Pfeiffer type","type":"related"},{"name":"ulna and fibula, hypoplasia OF","type":"related"}],"termid":"MONDO:0008618","xrefs":{"Monarch":{"xref_id":"0008618"}}}


id: PBO:0006177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_sequence_feature","termid":"PBO:0006177"}


id: GO:0015886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"heme transport","synonyms":[{"name":"haem transport","type":"exact"}],"termid":"GO:0015886"}


id: MONDO:0017035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic disease (obsolete MONDO:0017035)","secondary_identifiers":["Orphanet:264949"],"synonyms":[{"name":"secondary ILD in childhood and adulthood associated with a systemic disease","type":"exact"}],"termid":"MONDO:0017035","xrefs":{"Monarch":{"xref_id":"0017035"}}}


id: PBO:0113055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of ESCRT-II complex; contains GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into endosome; plays role in lager yeast flocculation under brewing conditions; plays role in formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0113055"}


id: GO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"mitotic cell cycle phase","termid":"GO:0098763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic M phase","secondary_identifiers":["Reactome:R-HSA-68886"],"synonyms":[{"name":"M phase of mitotic cell cycle","type":"exact"},{"name":"M-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000087"}


id: PBO:0077814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 3","termid":"PBO:0077814"}


id: GO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP biosynthetic process (obsolete GO:0030828)","synonyms":[{"name":"activation of cGMP biosynthetic process","type":"narrow"},{"name":"positive regulation of cGMP anabolism","type":"exact"},{"name":"positive regulation of cGMP biosynthesis","type":"exact"},{"name":"positive regulation of cGMP formation","type":"exact"},{"name":"positive regulation of cGMP synthesis","type":"exact"},{"name":"stimulation of cGMP biosynthetic process","type":"narrow"},{"name":"up regulation of cGMP biosynthetic process","type":"exact"},{"name":"up-regulation of cGMP biosynthetic process","type":"exact"},{"name":"upregulation of cGMP biosynthetic process","type":"exact"}],"termid":"GO:0030828"}


id: GO:0062099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["GOC:aruk","GOC:rph","PMID:27258785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"negatively_regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of programmed necrotic cell death","termid":"GO:0062099"}


id: MONDO:0010765
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"46,XY complete gonadal dysgenesis (46,XY CGD) is a disorder of sex development (DSD) associated with anomalies in gonadal development that result in the presence of female external and internal genitalia despite the 46,XY karyotype.","definition_xrefs":["Orphanet:242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY complete gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5068","NORD:1750","OMIMPS:400044","DOID:14448","SCTID:95218005","MESH:D006061","NCIT:C120198","UMLS:C2936694","MEDGEN:445380"],"synonyms":[{"name":"46 XY gonadal dysgenesis","type":"exact"},{"name":"46, XY CGD","type":"exact"},{"name":"46, XY complete gonadal dysgenesis","type":"exact"},{"name":"46, XY pure gonadal dysgenesis","type":"exact"},{"name":"46,XY CGD","type":"exact"},{"name":"46,XY SEX reversal","type":"exact"},{"name":"46,XY gonadal dysgenesis","type":"exact"},{"name":"46,XY pure gonadal dysgenesis","type":"exact"},{"name":"Swyer syndrome","type":"exact"},{"name":"gonadal dysgenesis, XY female type","type":"related"},{"name":"pure gonadal dysgenesis 46,XY","type":"exact"},{"name":"sex-reversing locus on X","type":"related"},{"name":"sex-reversing locus on X, formerly","type":"related"},{"name":"testis-determining Factor, X-chromosomal","type":"related"}],"termid":"MONDO:0010765","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0010765"}}}


id: PBO:0068245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 2","termid":"PBO:0068245"}


id: PBO:0040513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 2","termid":"PBO:0040513"}


id: MONDO:0014021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial episodic pain syndrome","termid":"MONDO:0018319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial episodic pain syndrome with predominantly upper body involvement","secondary_identifiers":["GARD:17618","MEDGEN:814997","OMIM:615040","UMLS:C3808667","DOID:0111729","Orphanet:391389"],"synonyms":[{"name":"FEPS1","type":"related"},{"name":"episodic pain syndrome, familial, 1","type":"related"},{"name":"episodic pain syndrome, familial, type 1","type":"exact"}],"termid":"MONDO:0014021","xrefs":{"Monarch":{"xref_id":"0014021"}}}


id: PBO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential meiotic structure-specific endonuclease 1","termid":"PBO:0046274"}


id: PBO:0080267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 30 pseudogene","termid":"PBO:0080267"}


id: GO:0062213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxynitrite = nitrate.","definition_xrefs":["PMID:30524950","RHEA:63116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peroxynitrite isomerase activity","termid":"GO:0062213"}


id: GO:0033557
data:
  {"annotated_genes":["SJAG_05180","SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61047,67759],"is_not":false,"summary":null,"term":"GO:0033557"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses an endonuclease activity that specifically cleaves certain types of branched DNA structures; because such structures often form during the replication ribosomal DNA (rDNA) repeats, the complex plays a role in the maintenance of rDNA. The subunits are known as Slx1 and Slx 4 in budding and fission yeasts, and are conserved in eukaryotes.","definition_xrefs":["PMID:16467377","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Slx1-Slx4 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0033557","terms_by_termid":{"GO:0033557":null}}


id: PBO:0070601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 69","termid":"PBO:0070601"}


id: FYPO:0003203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is curved.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"curved septum","synonyms":[{"name":"curved septum during mitotic cell cycle","type":"related"},{"name":"curved septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003203"}


id: PBO:0077676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 4","termid":"PBO:0077676"}


id: PBO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp15","termid":"PBO:0003367"}


id: RO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","termid":"RO:0002212"}


id: MONDO:0100156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of megaloblastic anemia associated with decreased serum vitamin B12 (cobalamin, Cbl) in infancy or early childhood. Low molecular weight (LMW) proteinuria is frequently present, but sometimes occurs later and is usually mild or subclinical. Patients often present with vague symptoms, including failure to thrive, loss of appetite, fatigue, lethargy, and/or recurrent infections. Some patients may present later in childhood with neurologic abnormalities related to B12 deficiency, such as sensorimotor neuropathy and/or cognitive disturbances.","definition_xrefs":["OMIM:261100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Imerslund-Grasbeck syndrome","termid":"MONDO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0006025","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome type 1","secondary_identifiers":["NCIT:C131677","UMLS:C4016819","MEDGEN:865256"],"synonyms":[{"name":"Imerslund-Grasbeck syndrome 1","type":"exact"},{"name":"Imerslund-Grasbeck syndrome type 1","type":"exact"},{"name":"MGA-1","type":"exact"},{"name":"MGA1","type":"exact"},{"name":"Mga1","type":"exact"},{"name":"enterocyte cobalamin malabsorption","type":"exact"},{"name":"enterocyte intrinsic factor receptor, defect of","type":"exact"},{"name":"megaloblastic Anaemia type 1","type":"exact"},{"name":"megaloblastic Anemia type 1","type":"exact"},{"name":"megaloblastic anemia, 1","type":"exact"},{"name":"megaloblastic anemia, Finnish type","type":"exact"},{"name":"pernicious anemia, juvenile, due to selective intestinal malabsorption of vitamin b12, with proteinuria","type":"exact"}],"termid":"MONDO:0100156","xrefs":{"Monarch":{"xref_id":"0100156"}}}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: PR:P87299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug74 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 74 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.08c","synonyms":[{"name":"Spom972h-mug74","type":"exact"}],"termid":"PR:P87299"}


id: MONDO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema is a rare, severe skin disorder. Signs and symptoms include abnormal accumulation of mucin in the skin (mucinosis), causing papular and sclerodermoid bumps; increased production of fibroblasts (connective tissue cells) in the absence of a thyroid disorder; and monoclonal gammopathy (abnormal proteins in the blood). It often involves internal organs and may affect various body systems. The cause of scleromyxedema is not known. There is no standard treatment. Management may involve the use of intravenous immunoglobulin (IVIG), plasmapheresis, thalidomide and corticoids, or more aggressive interventions, such as autologous bone marrow transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"lichen myxedematosus","termid":"MONDO:0018432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema","secondary_identifiers":["SCTID:402468007","GARD:7615","MEDGEN:120476","ICD9:701.8","MedDRA:10055046","MESH:D053718","Orphanet:167635","UMLS:C0263390","NCIT:C85061"],"synonyms":[{"name":"Arndt-Gottron disease","type":"exact"},{"name":"Scleromyxedema","type":"exact"},{"name":"generalised lichenoid papular eruption","type":"exact"},{"name":"generalised papular and sclerodermoid","type":"related"},{"name":"generalised papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"generalized lichenoid papular eruption","type":"exact"},{"name":"generalized papular and sclerodermoid","type":"related"},{"name":"generalized papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"lichen myxedematosus","type":"related"},{"name":"mucinosis, papular","type":"related"},{"name":"myxedematosus, lichen","type":"related"},{"name":"papular mucinosis","type":"related"},{"name":"scleromyxoedema","type":"exact"}],"termid":"MONDO:0015665","xrefs":{"Monarch":{"xref_id":"0015665"}}}


id: PBO:0028370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GU_repeat_RNA_binding","termid":"PBO:0028370"}


id: FYPO:0001304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myristoyl-CoA ligase activity","termid":"FYPO:0001303"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased myristoyl-CoA ligase activity","synonyms":[{"name":"decreased myristoyl-CoA synthetase activity","type":"related"},{"name":"reduced myristoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001304"}


id: GO:0098855
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cation ion channel with a preference for K+ over Na+ ions, which is activated by membrane hyperpolarization, and consists of a tetramer of HCN family members. Some members of this family (HCN1, HCN2 and HCN4) are also activated when cAMP binds to their cyclic nucleotide binding domain (CNBD). Channel complexes of this family play an important role in the control of pacemaker activity in the heart.","definition_xrefs":["PMID:20829353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"HCN channel complex","secondary_identifiers":["GO:1990746","GO:1990759"],"synonyms":[{"name":"HCN1 channel complex","type":"narrow"},{"name":"HCN2 channel complex","type":"narrow"},{"name":"HCN3 channel complex","type":"narrow"},{"name":"HCN4 channel complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated channel 3 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel 1 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel 2 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel 4 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel complex","type":"exact"},{"name":"potassium/sodium hyperpolarization-activated channel 3 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 tetramer","type":"related"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 tetramer","type":"related"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel complex","type":"exact"}],"termid":"GO:0098855"}


id: MONDO:0017930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sclerosing bone dystrophy with extra-skeletal manifestations","secondary_identifiers":["GARD:21439","MEDGEN:1676501","UMLS:C5191052","Orphanet:324364"],"termid":"MONDO:0017930","xrefs":{"Monarch":{"xref_id":"0017930"}}}


id: GO:0034889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan hemisulfate + H2O = endosulfan monoalcohol + 2 H+ + sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan hemisulfate sulfatase activity (obsolete GO:0034889)","termid":"GO:0034889"}


id: PBO:0041774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 13","termid":"PBO:0041774"}


id: FYPO:0000981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAD+ as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal glutamate dehydrogenase (NAD+) activity","synonyms":[{"name":"normal NAD-GDH activity","type":"exact"}],"termid":"FYPO:0000981"}


id: MONDO:0007071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenocortical hypofunction, chronic primary congenital","secondary_identifiers":["UMLS:C0271740","ICD9:255.41","GARD:15033","MEDGEN:78784","MESH:C562711","OMIM:103230","SCTID:12427005"],"synonyms":[{"name":"Addison disease, congenital","type":"related"},{"name":"adrenocortical hypofunction, chronic primary congenital","type":"exact"}],"termid":"MONDO:0007071","xrefs":{"Monarch":{"xref_id":"0007071"}}}


id: MONDO:0021501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal benign neoplasm","termid":"MONDO:0003062"},{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of small intestine","secondary_identifiers":["UMLS:C0153944","NCIT:C3600","SCTID:92385005","ICD9:211.2","MEDGEN:56324"],"synonyms":[{"name":"benign neoplasm of the small intestine","type":"exact"},{"name":"benign small intestinal neoplasm","type":"exact"},{"name":"benign small intestinal tumor","type":"exact"},{"name":"benign small intestinal tumour","type":"exact"},{"name":"benign small intestine neoplasm","type":"exact"},{"name":"benign small intestine tumor","type":"exact"},{"name":"benign small intestine tumour","type":"exact"},{"name":"benign tumor of small intestine","type":"exact"},{"name":"benign tumor of the small intestine","type":"exact"},{"name":"benign tumour of small intestine","type":"exact"},{"name":"benign tumour of the small intestine","type":"exact"},{"name":"small intestine benign neoplasm","type":"exact"}],"termid":"MONDO:0021501","xrefs":{"Monarch":{"xref_id":"0021501"}}}


id: MONDO:0023607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laurence-Prosser-Rocker syndrome","secondary_identifiers":["UMLS:C2931651","MESH:C537882","MEDGEN:419133"],"synonyms":[{"name":"Hirschsprung's disease associated with congenital heart malformation, broad big toes, and ulnar polydactyly","type":"related"},{"name":"Hirschsprung's disease associated with ulnar polydactyly, polysyndactyly of big toes and ventricular septal defect","type":"related"}],"termid":"MONDO:0023607","xrefs":{"Monarch":{"xref_id":"0023607"}}}


id: PBO:0056619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding protein 2","termid":"PBO:0056619"}


id: FYPO:0001492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable elongated vegetative cell","synonyms":[{"name":"elongated viable vegetative cell","type":"exact"},{"name":"viable elongated cell during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001492"}


id: PBO:0038875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 2","termid":"PBO:0038875"}


id: GO:0120340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 1 (RS1) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["PMID:25694453","GOC:krc","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 1","termid":"GO:0120333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"radial spoke base 1","termid":"GO:0120340"}


id: PBO:0080626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 73","termid":"PBO:0080626"}


id: GO:1900930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-tyrosine import across plasma membrane","termid":"GO:1900929"},{"relation_name":"negatively_regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"down regulation of L-tyrosine import","type":"exact"},{"name":"down regulation of L-tyrosine uptake","type":"related"},{"name":"down-regulation of L-tyrosine import","type":"exact"},{"name":"down-regulation of L-tyrosine uptake","type":"related"},{"name":"downregulation of L-tyrosine import","type":"exact"},{"name":"downregulation of L-tyrosine uptake","type":"related"},{"name":"inhibition of L-tyrosine import","type":"narrow"},{"name":"inhibition of L-tyrosine uptake","type":"related"},{"name":"negative regulation of L-tyrosine import","type":"broad"},{"name":"negative regulation of L-tyrosine uptake","type":"related"}],"termid":"GO:1900930"}


id: PBO:0067525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 668, pseudogene","termid":"PBO:0067525"}


id: MONDO:0017943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoerythrocyte sensitization syndrome","secondary_identifiers":["SCTID:275446004","GARD:6481","ICD9:287.2","UMLS:C0301928","MEDGEN:90141","MESH:C535645","Orphanet:324636"],"synonyms":[{"name":"Autoerythrocyte sensitization","type":"related"},{"name":"Autoerythrocyte sensitization purpura","type":"related"},{"name":"GDS","type":"exact"},{"name":"Gardner-Diamond syndrome","type":"exact"},{"name":"painful bruising syndrome","type":"exact"},{"name":"psychogenic purpura","type":"exact"}],"termid":"MONDO:0017943","xrefs":{"Monarch":{"xref_id":"0017943"}}}


id: GO:0021932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radially directed movement of a cell along radial glial cells in the hindbrain. Radial migration refers to a directed movement from the internal ventricular area to the outer surface of the hindbrain.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}


id: GO:0120343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The radial spoke neck is a complex that connects the spoke stalk to the head.","definition_xrefs":["GOC:krc","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"radial spoke neck","termid":"GO:0120343"}


id: PBO:0057021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 122","termid":"PBO:0057021"}


id: SO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a variant has become fixed in the population so that it is now the only variant.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fixed_variant","synonyms":[{"name":"fixed variant","type":"exact"}],"termid":"SO:0001768"}


id: PR:Q9UT84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC343.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase family protein C343.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.06c","synonyms":[{"name":"Spom972h-SPAC343.06c","type":"exact"}],"termid":"PR:Q9UT84"}


id: MONDO:0004413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of cervical squamous cell carcinoma characterized by the presence of polygonal squamous cells. Intercellular bridges and cytoplasmic keratinization may be present, but keratin pearls are absent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical non-keratinizing squamous cell carcinoma","secondary_identifiers":["UMLS:C1518366","DOID:7961","MEDGEN:309426","NCIT:C40188"],"termid":"MONDO:0004413","xrefs":{"Monarch":{"xref_id":"0004413"}}}


id: PR:Q9US22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1502 gene.","definition_xrefs":["UniProtKB:Q9US22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.08c","synonyms":[{"name":"Spom972h-rpl1502","type":"exact"}],"termid":"PR:Q9US22"}


id: PBO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine-pyridoxal-pyridoxamine kinase (predicted)","termid":"PBO:0001711"}


id: GO:0003980
data:
  {"annotated_genes":["SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81332],"is_not":false,"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins.","definition_xrefs":["GOC:al","PMID:10764828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:61304","Reactome:R-HSA-548884"],"synonyms":[{"name":"UGGT activity","type":"exact"}],"termid":"GO:0003980","terms_by_termid":{"GO:0003980":null}}


id: PBO:0077389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 129, E3 ubiquitin ligase","termid":"PBO:0077389"}


id: PBO:0040092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L","termid":"PBO:0040092"}


id: PBO:0080940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zonadhesin","termid":"PBO:0080940"}


id: MONDO:0013728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 2","secondary_identifiers":["OMIM:614390","UMLS:C3280672","MEDGEN:482302"],"synonyms":[{"name":"F2 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL2","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013728","xrefs":{"Monarch":{"xref_id":"0013728"}}}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: GO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Provision of the template used by reverse transcriptase to synthesize the G-rich strand of telomeric DNA.","definition_xrefs":["PMID:7958872","PMID:11812242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA template activity","termid":"GO:0000497"},{"relation_name":"part_of","term_name":"telomerase activity","termid":"GO:0003720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"part_of","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"part_of","termid":"GO:0003824"},{"rel_name":"part_of","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140097","GO:0003677","GO:0016740","GO:0005488","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"template for synthesis of G-rich strand of telomere DNA activity","synonyms":[{"name":"telomerase RNA","type":"exact"},{"name":"telomerase, template","type":"exact"}],"termid":"GO:0000332"}


id: FYPO:0002521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation with wild type h- cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of conjugation with h- cells","synonyms":[{"name":"decreased conjugation with WT h- cells","type":"exact"},{"name":"decreased frequency of conjugation with h minus cells","type":"exact"},{"name":"decreased frequency of mating with h- cells","type":"exact"},{"name":"reduced frequency of conjugation with h- cells","type":"exact"}],"termid":"FYPO:0002521"}


