# terms

id: MONDO:0024677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insulin-producing neuroendocrine tumor arising from the beta cells of the pancreas. Patients exhibit symptoms related to hypoglycemia due to inappropriate secretion of insulin.","definition_xrefs":["NCIT:C95598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic insulin-producing neuroendocrine tumor","termid":"MONDO:0005048"},{"relation_name":"is_a","term_name":"functional pancreatic neuroendocrine tumor","termid":"MONDO:0023206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic insulinoma","secondary_identifiers":["MedDRA:10022498","DOID:3892","MEDGEN:43907","MESH:D007340","HP:0012197","NANDO:2200398","SCTID:302822000","UMLS:C0021670"],"synonyms":[{"name":"Insulinomas","type":"related"},{"name":"Insulomas","type":"related"},{"name":"adenoma, beta cell","type":"related"},{"name":"adenoma, beta-cell","type":"related"},{"name":"adenomas, beta-cell","type":"related"},{"name":"beta cell tumor","type":"related"},{"name":"beta cell tumour","type":"related"},{"name":"beta-cell adenoma","type":"related"},{"name":"beta-cell adenomas","type":"related"},{"name":"beta-cell tumor","type":"related"},{"name":"beta-cell tumors","type":"related"},{"name":"beta-cell tumour","type":"related"},{"name":"beta-cell tumours","type":"related"},{"name":"insulin-producing tumour of islet cells","type":"related"},{"name":"insulinoma","type":"exact"},{"name":"insulinoma tumor suppressor GENE locus","type":"related"},{"name":"insulinoma tumour suppressor GENE locus","type":"related"},{"name":"insuloma","type":"related"},{"name":"islet cell adenoma","type":"related"},{"name":"pancreatic insulinoma","type":"exact"},{"name":"tumor, beta-cell","type":"related"},{"name":"tumors, beta-cell","type":"related"}],"termid":"MONDO:0024677","xrefs":{"Monarch":{"xref_id":"0024677"}}}


id: PBO:0110382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL5 pseudogene 1","termid":"PBO:0110382"}


id: MONDO:0012195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal arthrogryposis type 4 is an inherited developmental defect syndrome characterized by multiple congenital contractures of limbs, without primary neurologic and/or muscle disease that affects limb function, and a mild to severe scoliosis. Intelligence is normal.","definition_xrefs":["Orphanet:65720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-severe scoliosis syndrome","secondary_identifiers":["DOID:0111610","GARD:16672","MEDGEN:373169","MESH:C563791","OMIM:609128","SCTID:715575001","UMLS:C1836756"],"synonyms":[{"name":"DA4","type":"related"},{"name":"arthrogryposis with Severe scoliosis","type":"related"},{"name":"arthrogryposis, distal, type 2D","type":"related"},{"name":"arthrogryposis, distal, type 4","type":"related"},{"name":"distal arthrogryposis type 4","type":"exact"},{"name":"distal arthrogryposis type IID","type":"exact"}],"termid":"MONDO:0012195","xrefs":{"Monarch":{"xref_id":"0012195"}}}


id: GO:0040037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of FGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of FGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040037"}


id: PBO:0004641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin family U3 and U14 snoRNA associated protein (predicted)","termid":"PBO:0004641"}


id: GO:0036030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and plasma kallikrein (KLK1B); formation of the complex inhibits the serine protease activity of plasma kallikrein.","definition_xrefs":["PMID:8536714","GOC:ans","PMID:2844223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-plasma kallikrein complex","synonyms":[{"name":"PCI-plasma kallikrein complex","type":"exact"},{"name":"SERPINA5-plasma kallikrein complex","type":"exact"},{"name":"plasma serine protease inhibitor-plasma kallikrein complex","type":"exact"},{"name":"protein C inhibitor-KLKB1 complex","type":"exact"},{"name":"serpin A5-plasma kallikrein complex","type":"exact"}],"termid":"GO:0036030"}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: MONDO:1011751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrochordonous plaque, non-human animal","secondary_identifiers":["OMIA:001370"],"termid":"MONDO:1011751","xrefs":{"Monarch":{"xref_id":"1011751"}}}


id: MONDO:0011837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital vitamin K-dependent coagulation factors combined deficiency in which the cause of the disease is a mutation in the VKORC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vitamin K-dependent coagulation factors deficiency","termid":"MONDO:0015722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"vitamin K-dependent clotting factors, combined deficiency of, type 2","secondary_identifiers":["DOID:0112174","OMIM:607473","MESH:C564393","GARD:18196","UMLS:C1843832","MEDGEN:334505"],"synonyms":[{"name":"VKCFD2","type":"related"},{"name":"VKORC1 congenital vitamin K-dependent coagulation factors combined deficiency","type":"exact"},{"name":"congenital vitamin K-dependent coagulation factors combined deficiency caused by mutation in VKORC1","type":"exact"},{"name":"vitamin K-dependent clotting factors, combined deficiency of, 2","type":"exact"},{"name":"vitamin K-dependent clotting factors, combined deficiency of, type 2","type":"exact"}],"termid":"MONDO:0011837","xrefs":{"Monarch":{"xref_id":"0011837"}}}


id: PBO:0046118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2","termid":"PBO:0046118"}


id: MONDO:0013705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 19","secondary_identifiers":["OMIM:614343","MEDGEN:482171","UMLS:C3280541","GARD:22558"],"synonyms":[{"name":"MRT19","type":"exact"},{"name":"intellectual disability, autosomal recessive 19","type":"exact"},{"name":"mental retardation, autosomal recessive 19","type":"related"}],"termid":"MONDO:0013705","xrefs":{"Monarch":{"xref_id":"0013705"}}}


id: MONDO:0008805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Takayasu's arteritis (obsolete MONDO:0008805)","termid":"MONDO:0008805","xrefs":{"Monarch":{"xref_id":"0008805"}}}


id: MONDO:0022586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone dysplasia Moore type","secondary_identifiers":["GARD:923"],"termid":"MONDO:0022586","xrefs":{"Monarch":{"xref_id":"0022586"}}}


id: PBO:0045856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 46","termid":"PBO:0045856"}


id: PBO:0079718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 5","termid":"PBO:0079718"}


id: PBO:0079768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 1","termid":"PBO:0079768"}


id: PBO:0052798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 38","termid":"PBO:0052798"}


id: PBO:0063350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 4","termid":"PBO:0063350"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["PMID:23826995","GO_REF:0000071","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: MONDO:0003581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma arising from the ovary. Signs and symptoms include the presence of an abdominal mass and abdominal pain.","definition_xrefs":["NCIT:C8108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian embryonal carcinoma","secondary_identifiers":["DOID:5681","ONCOTREE:OEC","MEDGEN:91090","SCTID:254872007","UMLS:C0346183","EFO:1000415"],"synonyms":[{"name":"embryonal carcinoma","type":"related"},{"name":"embryonal carcinoma of ovary","type":"exact"},{"name":"embryonal carcinoma of the ovary","type":"exact"},{"name":"ovarian embryonal carcinoma","type":"exact"},{"name":"ovary embryonal carcinoma","type":"exact"}],"termid":"MONDO:0003581","xrefs":{"Monarch":{"xref_id":"0003581"}}}


id: PR:Q9HGP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10619:SF0","PRO:DNx","OMA:SCHPO00867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC631.01c","secondary_identifiers":["UniProtKB:Q9HGP5"],"synonyms":[{"name":"Spom972h-CAPZB","type":"exact"}],"termid":"PR:Q9HGP5"}


id: GO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland development","termid":"GO:0048733"}


id: GO:0031088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"platelet dense granule membrane","termid":"GO:0031088"}


id: PBO:0042260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4 pseudogene 2","termid":"PBO:0042260"}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0878937420","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: PBO:0071027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 29","termid":"PBO:0071027"}


id: SO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which changes the localization of a polypeptide with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_localization_variant","synonyms":[{"name":"polypeptide localization variant","type":"exact"}],"termid":"SO:0001558"}


id: MONDO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nevus of Ito is a benign dermal melanocytosis occurring most frequently in the Asian populations and characterized by unilateral, asymptomatic, blue, gray or brown skin pigmentation within the acromioclavicular and upper chest area (involving the side of the neck, the supraclavicular and scapular areas, and the shoulder region). It is usually diagnosed in early infancy and in early adolescence. Nevus of Ito may progressively enlarge and darken in color (particularly with puberty) and its appearance usually remains stable once adulthood is reached. Spontaneous regression does not occur. Malignant melanoma has rarely been reported within a nevus of Ito. It shares the clinical features of nevus of Ota, except its anatomic location and may in rare occasions occur together with the latter.","definition_xrefs":["Orphanet:263432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nevus of Ito","secondary_identifiers":["EFO:1000395","GARD:10830","NCIT:C7582"],"synonyms":[{"name":"Ito's Nevus","type":"exact"},{"name":"hypomelanosis of Ito","type":"related"},{"name":"nevi of Ito","type":"exact"},{"name":"nevus fuscocaeruleus acromiodeltoideus","type":"exact"}],"termid":"MONDO:0016985","xrefs":{"Monarch":{"xref_id":"0016985"}}}


id: PBO:0116646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 1","termid":"PBO:0116646"}


id: MONDO:0015384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digestive duplication cyst of the tongue is an extremely rare otorhinolaryngological malformation which occurs during early embryogenesis and is characterized by a single, and on occasion multiple, cystic lesion that is most frequently located in the anterior portion of the tongue, either deeply embedded within it or superficially on it. Depending mostly on size and location of the cyst, patients could be asymptomatic or could present a wide array of symptoms, such as varying degrees of respiratory and feeding difficulties, lingual swelling and protrusion, dysphagia, and more rarely, recurrent bleeding or brownish discharge from a lingual sinus.","definition_xrefs":["Orphanet:141071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digestive duplication cyst of the tongue","secondary_identifiers":["MEDGEN:1393450","UMLS:C4512051","GARD:19942"],"synonyms":[{"name":"cysts and fistulae of the face and oral cavity of tongue","type":"exact"},{"name":"enteric duplication cyst of the tongue","type":"exact"},{"name":"foregut duplication cyst of the tongue","type":"exact"},{"name":"gastric duplication cyst of the tongue","type":"exact"},{"name":"tongue cysts and fistulae of the face and oral cavity","type":"exact"}],"termid":"MONDO:0015384","xrefs":{"Monarch":{"xref_id":"0015384"}}}


id: PBO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 1","termid":"PBO:0043772"}


id: MONDO:0032666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"epidermodysplasia verruciformis, susceptibility to","termid":"MONDO:0100043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermodysplasia verruciformis, susceptibility to, 4","secondary_identifiers":["MEDGEN:1648396","UMLS:C4749042","OMIM:618307","NCIT:C176608"],"synonyms":[{"name":"EPIDERMODYSPLASIA VERRUCIFORMIS, SUSCEPTIBILITY TO, 4","type":"related"},{"name":"EV4","type":"related"}],"termid":"MONDO:0032666","xrefs":{"Monarch":{"xref_id":"0032666"}}}


id: PBO:0073500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine rich tetratricopeptide repeat co-chaperone alpha","termid":"PBO:0073500"}


id: PBO:0072905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 3","termid":"PBO:0072905"}


id: PBO:0066255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 3","termid":"PBO:0066255"}


id: GO:1904643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24755072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to curcumin","termid":"GO:1904643"}


id: GO:0051584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"regulates","term_name":"dopamine uptake involved in synaptic transmission","termid":"GO:0051583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of dopamine import involved in synaptic transmission","type":"exact"}],"termid":"GO:0051584"}


id: MONDO:0013534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"apolipoprotein c-III deficiency","secondary_identifiers":["UMLS:C3151467","OMIM:614028","MEDGEN:462817","DOID:0111370","GARD:18076","MESH:C566270"],"synonyms":[{"name":"apolipoprotein c-III deficiency","type":"exact"},{"name":"hyperalphalipoproteinemia 2","type":"related"}],"termid":"MONDO:0013534","xrefs":{"Monarch":{"xref_id":"0013534"}}}


id: FYPO:0000486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of meiotic recombination","synonyms":[{"name":"delayed meiotic recombination","type":"exact"},{"name":"meiotic recombination: delayed","type":"related"}],"termid":"FYPO:0000486"}


id: GO:0090239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation (obsolete GO:0090239)","termid":"GO:0090239"}


id: PBO:0063770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2 pseudogene 1","termid":"PBO:0063770"}


id: PBO:0049803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 2","termid":"PBO:0049803"}


id: PBO:0050999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport associated protein","termid":"PBO:0050999"}


id: GO:0042341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanogenic glycosides, any glycoside containing a cyano group that is released as hydrocyanic acid on acid hydrolysis; such compounds occur in the kernels of various fruits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cyanogenic glycoside metabolic process","synonyms":[{"name":"cyanogenic glycoside metabolism","type":"exact"}],"termid":"GO:0042341"}


id: PBO:0057430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-3","termid":"PBO:0057430"}


id: GO:0045007
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96775],"is_not":false,"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"},{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"depurination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73927","Wikipedia:Depurination"],"termid":"GO:0045007","terms_by_termid":{"GO:0045007":null}}


id: MONDO:0014774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 7","secondary_identifiers":["OMIM:616792","UMLS:C4225207","MEDGEN:899178"],"synonyms":[{"name":"NBLST7","type":"exact"},{"name":"neuroblastoma, susceptibility to, 7","type":"exact"},{"name":"neuroblastoma, susceptibility to, 7; NBLST7","type":"exact"},{"name":"neuroblastoma, susceptibility to, type 7","type":"exact"}],"termid":"MONDO:0014774","xrefs":{"Monarch":{"xref_id":"0014774"}}}


id: GO:1902550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any lymphoid lineage cell migration into thymus that is involved in thymus epithelium morphogenesis.","definition_xrefs":["PMID:22342843","GOC:TermGenie","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration into thymus","termid":"GO:0097535"},{"relation_name":"part_of","term_name":"thymus epithelium morphogenesis","termid":"GO:0097536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus involved in thymus epithelium morphogenesis","synonyms":[{"name":"lymphoid lineage cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymus epithelium morphogenesis","type":"exact"}],"termid":"GO:1902550"}


id: FYPO:0001883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing caspofungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on caspofungin","synonyms":[{"name":"normal cell population growth in presence of caspofungin","type":"exact"},{"name":"normal cell population growth on caspofungin","type":"exact"},{"name":"normal cell population growth on glucan synthase inhibitor","type":"broad"},{"name":"normal cellular response to caspofungin","type":"related"},{"name":"normal vegetative cell population growth on caspofungin","type":"exact"}],"termid":"FYPO:0001883"}


id: PR:Q10300
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.06c gene.","definition_xrefs":["UniProtKB:Q10300","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.06c","synonyms":[{"name":"Spom972h-SPAC22H10.06c","type":"exact"}],"termid":"PR:Q10300"}


id: MONDO:0003430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma or carcinoma of the anterior lobe of the pituitary gland that produces prolactin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin producing pituitary tumor","secondary_identifiers":["UMLS:C0278863","NCIT:C7910","MEDGEN:82998","DOID:5396"],"synonyms":[{"name":"PRL producing pituitary gland neoplasm","type":"exact"},{"name":"malignant prolactin producing neoplasm of pituitary gland","type":"narrow"},{"name":"malignant prolactinoma","type":"narrow"},{"name":"prolactin producing neoplasm of pituitary","type":"exact"},{"name":"prolactin producing neoplasm of pituitary gland","type":"exact"},{"name":"prolactin producing neoplasm of the pituitary","type":"exact"},{"name":"prolactin producing neoplasm of the pituitary gland","type":"exact"},{"name":"prolactin producing pituitary gland neoplasm","type":"exact"},{"name":"prolactin producing pituitary gland tumor","type":"exact"},{"name":"prolactin producing pituitary gland tumour","type":"exact"},{"name":"prolactin producing pituitary neoplasm","type":"exact"},{"name":"prolactin producing pituitary tumor","type":"exact"},{"name":"prolactin producing tumor of pituitary","type":"exact"},{"name":"prolactin producing tumor of pituitary gland","type":"exact"},{"name":"prolactin producing tumor of the pituitary","type":"exact"},{"name":"prolactin producing tumor of the pituitary gland","type":"exact"},{"name":"prolactin producing tumour of pituitary","type":"exact"},{"name":"prolactin producing tumour of pituitary gland","type":"exact"},{"name":"prolactin producing tumour of the pituitary","type":"exact"},{"name":"prolactin producing tumour of the pituitary gland","type":"exact"},{"name":"prolactin secreting neoplasm of pituitary","type":"exact"},{"name":"prolactin secreting neoplasm of pituitary gland","type":"exact"},{"name":"prolactin secreting neoplasm of the pituitary","type":"exact"},{"name":"prolactin secreting neoplasm of the pituitary gland","type":"exact"},{"name":"prolactin secreting pituitary gland neoplasm","type":"exact"},{"name":"prolactin secreting pituitary gland tumor","type":"exact"},{"name":"prolactin secreting pituitary gland tumour","type":"exact"},{"name":"prolactin secreting pituitary neoplasm","type":"exact"},{"name":"prolactin secreting pituitary tumor","type":"exact"},{"name":"prolactin secreting pituitary tumour","type":"exact"},{"name":"prolactin secreting tumor of pituitary","type":"exact"},{"name":"prolactin secreting tumor of pituitary gland","type":"exact"},{"name":"prolactin secreting tumor of the pituitary","type":"exact"},{"name":"prolactin secreting tumor of the pituitary gland","type":"exact"},{"name":"prolactin secreting tumour of pituitary","type":"exact"},{"name":"prolactin secreting tumour of pituitary gland","type":"exact"},{"name":"prolactin secreting tumour of the pituitary","type":"exact"},{"name":"prolactin secreting tumour of the pituitary gland","type":"exact"},{"name":"prolactin-producing pituitary gland neoplasm","type":"exact"},{"name":"prolactin-producing pituitary gland tumor","type":"exact"},{"name":"prolactin-producing pituitary gland tumour","type":"exact"}],"termid":"MONDO:0003430","xrefs":{"Monarch":{"xref_id":"0003430"}}}


id: GO:0072662
data:
  {"annotated_genes":["SJAG_05950","SJAG_02997","SJAG_00326","SJAG_03440","SJAG_04857","SJAG_02034","SJAG_04763","SJAG_02797","SJAG_01165","SJAG_00702","SJAG_02619","SJAG_02693","SJAG_03324","SJAG_04428","SJAG_03781","SJAG_05315","SJAG_00891"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71898,73812,81457,113393,98397,72413,75084,104208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[72438,63397,75477],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[65262,119337,100496,117320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[97341,113394,92308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[98880,92317,92309,105043,97342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a peroxisome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0007031","GO:0008150"],"is_obsolete":false,"name":"protein localization to peroxisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein localisation to peroxisome","type":"exact"}],"termid":"GO:0072662","terms_by_termid":{"GO:0006625":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0064564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 2","termid":"PBO:0064564"}


id: MONDO:0100128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The simultaneous infection of a host by multiple pathogen species.","definition_xrefs":["OMIT:0027719","EFO:0010716","Wikipedia:Coinfection"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coinfection","secondary_identifiers":["MEDGEN:452372","MESH:D060085","UMLS:C0275524"],"termid":"MONDO:0100128","xrefs":{"Monarch":{"xref_id":"0100128"}}}


id: GO:0021697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex formation","termid":"GO:0021697"}


id: PBO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CocKayNe syndrome 1","termid":"PBO:0003332"}


id: MONDO:0005879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular toxoplasmosis is an infection in the eye caused by the parasite, Toxoplasm a gondii. Toxoplasmosis is the most common cause of eye inflammation in the world. Toxoplamosis can beacquired or present at birth (congenital), having crossed the placenta from a newly infected mother to her fetus. Most humans acquire toxoplasmosis by eating raw or undercooked meat, vegetables or milk products, or by coming into contact with infected cat litterbox or sandboxes.In humans,the infectionusually causes no symptoms, and resolves without treatment in a few months. In individuals with compromised immune systems, Toxoplasm a gondii can reactivate to cause disease. Reactivation of a congenital infection was traditionally thought to be the most common cause ofocular toxoplasmosis, but an acquired infection is now considered to be more common. A toxoplasmosis infection that affects the eye usually attacks the retina andinitially resolves without symptoms. However,the inactive parasite maylaterreactivate causing eyepain, blurred vision, and possibly permanent damage, including blindness. Although most cases of toxoplasmosis resolve on their own,for some,inflammation can be treated with antibiotics and steroids.","direct_ancestors":[{"relation_name":"is_a","term_name":"toxoplasmosis","termid":"MONDO:0005989"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular toxoplasmosis","secondary_identifiers":["EFO:0007399","MESH:D014126","UMLS:C0040561","MEDGEN:21599","ICD9:130.7","SCTID:416481006"],"termid":"MONDO:0005879","xrefs":{"Monarch":{"xref_id":"0005879"}}}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: PBO:0071371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 30","termid":"PBO:0071371"}


id: PBO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family protein","termid":"PBO:0001979"}


id: PBO:0025480
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a cup of GReen Tea wakes up the sleepy guy","termid":"PBO:0025480"}


id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: PBO:0060388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid zinc finger 1","termid":"PBO:0060388"}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: PBO:0038820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 23","termid":"PBO:0038820"}


id: PBO:0116301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TTT complex and the telomere cap complex; subunit of the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation, and  involved in chromatin remodeling and the telomere cap complex; DNA-binding protein specific to single-stranded yeast telomeric DNA repeats; required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0116301"}


id: PBO:0052738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 30","termid":"PBO:0052738"}


id: PBO:0079833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UMODL1 antisense RNA 1","termid":"PBO:0079833"}


id: GO:1900445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"}],"termid":"GO:1900445"}


id: PBO:0026889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-translation_regulation_phenotype_during_vegetative_growth","termid":"PBO:0026889"}


id: PBO:0051586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor accessory protein","termid":"PBO:0051586"}


id: GO:0006085
data:
  {"annotated_genes":["SJAG_02769","SJAG_03290","SJAG_02006","SJAG_01402","SJAG_00866","SJAG_02158","SJAG_03310","SJAG_03064","SJAG_01139","SJAG_03731","SJAG_02741"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100297],"is_not":false,"summary":null,"term":"GO:0006085"},{"annotations":[93328,70355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[119078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[76374,80893,74475,89286,89722,75110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[76925],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:Acetyl-CoA-Biosynthesis"],"synonyms":[{"name":"acetyl-CoA anabolism","type":"exact"},{"name":"acetyl-CoA biosynthesis","type":"exact"},{"name":"acetyl-CoA formation","type":"exact"},{"name":"acetyl-CoA synthesis","type":"exact"}],"termid":"GO:0006085","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0010510":null,"GO:0019427":null,"GO:1990181":null}}


id: PBO:0031095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formation_of_azygotic_ascus_upon_sporulation_(obsolete_FYPO:0000279)","termid":"PBO:0031095"}


id: PBO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_methyltransferase_activity","termid":"PBO:0035940"}


id: PBO:0066151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 7","termid":"PBO:0066151"}


id: GO:0015279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A ligand-gated ion channel activity which transports calcium in response to emptying of intracellular calcium stores.","definition_xrefs":["GOC:dph","GOC:tb","PMID:15788710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"store-operated calcium channel activity","secondary_identifiers":["Reactome:R-HSA-434798"],"termid":"GO:0015279"}


id: PBO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cycloheximide","termid":"PBO:0030381"}


id: MOD:01209
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to the copper(1+) aspartate salt.","definition_xrefs":["Unimod:531#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) L-aspartate","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01209"}


id: MONDO:1012218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarthritis, non-human animal","termid":"MONDO:1011952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarthritis, domestic cat","secondary_identifiers":["OMIA:000805-9685"],"termid":"MONDO:1012218","xrefs":{"Monarch":{"xref_id":"1012218"}}}


id: PBO:0029834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus","termid":"PBO:0029834"}


id: FYPO:0000027
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal cell wall during mitotic cell cycle","type":"related"},{"name":"cell wall defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000027","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (pseudohyphal growth) (obsolete GO:0000191)","synonyms":[{"name":"activation of MAPKKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000191"}


id: PBO:0068553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 4, pseudogene","termid":"PBO:0068553"}


id: MONDO:0060642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features","secondary_identifiers":["UMLS:C4693405","MEDGEN:1647077","OMIM:617865"],"synonyms":[{"name":"NEDMAGA","type":"related"},{"name":"neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features","type":"exact"}],"termid":"MONDO:0060642","xrefs":{"Monarch":{"xref_id":"0060642"}}}


id: PBO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H1","termid":"PBO:0050565"}


id: PBO:0089566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding TFAR19-related protein, human Programmed cell death protein 5 ortholog","termid":"PBO:0089566"}


id: PBO:0085822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels","termid":"PBO:0085822"}


id: PBO:0014245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family double bromodomain protein Brf2","termid":"PBO:0014245"}


id: PBO:0028759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0028759"}


id: PBO:0036454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Abc1/Coq8","termid":"PBO:0036454"}


id: PBO:0040767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 2","termid":"PBO:0040767"}


id: MONDO:0004783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete panhypopituitarism (obsolete MONDO:0004783)","termid":"MONDO:0004783","xrefs":{"Monarch":{"xref_id":"0004783"}}}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: PR:O94527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD and tetratricopeptide repeats protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein iqw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.03","secondary_identifiers":["UniProtKB:O94527"],"synonyms":[{"name":"Spom972h-WDTC1","type":"exact"}],"termid":"PR:O94527"}


id: GO:1902122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chenodeoxycholic acid.","definition_xrefs":["GOC:bf","PMID:10334992","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"bile acid binding","termid":"GO:0032052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chenodeoxycholic acid binding","synonyms":[{"name":"CDCA binding","type":"exact"}],"termid":"GO:1902122"}


id: GO:0061333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal tubule is generated by specification of cell fate, through the maintenance of cell polarity, regulated cell proliferation and morphogenetic cell rearrangements, shape changes and growth. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"renal tubule development","termid":"GO:0061326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule morphogenesis","termid":"GO:0061333"}


id: GO:0016882
data:
  {"annotated_genes":["SJAG_01616","SJAG_00673","SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030272"},{"annotations":[77958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004141"},{"annotations":[72519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two groups within a single molecule via a carbon-nitrogen bond, forming heterocyclic ring, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00673":null,"SJAG_01616":null,"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.3.3.-"],"termid":"GO:0016882","terms_by_termid":{"GO:0004141":null,"GO:0004641":null,"GO:0030272":null}}


id: MONDO:0020663
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of atypical spindle cells.","definition_xrefs":["NCIT:C27091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant spindle cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:90746","UMLS:C0334230"],"synonyms":[{"name":"malignant spindle cell neoplasm","type":"exact"},{"name":"malignant spindle cell tumor","type":"exact"},{"name":"malignant spindle cell tumour","type":"exact"},{"name":"spindle cell cancer","type":"exact"}],"termid":"MONDO:0020663","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020663"}}}


id: GO:0044564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant blocking of a voltage-gated potassium channel, inhibiting the pore's activity, in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in occlusion of the pore of voltage-gated potassium channel (obsolete GO:0044564)","synonyms":[{"name":"envenomation resulting in occlusion of the pore of voltage-gated potassium channel in other organism","type":"exact"}],"termid":"GO:0044564"}


id: PATO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porous","termid":"PATO:0000984"}


id: PBO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 6","termid":"PBO:0043316"}


id: PBO:0042063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 126","termid":"PBO:0042063"}


id: GO:0070260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 5'-phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between DNA topoisomerase II and DNA.","definition_xrefs":["PMID:16751265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"5'-tyrosyl-DNA phosphodiesterase activity","termid":"GO:0070260"}


id: GO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthine + NAD+ + H2O = urate + NADH + H+.","definition_xrefs":["EC:1.17.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"xanthine dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN0-901","Reactome:R-HSA-9727349","RHEA:16669"],"synonyms":[{"name":"NAD-xanthine dehydrogenase activity","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"},{"name":"xanthine-NAD oxidoreductase activity","type":"related"},{"name":"xanthine/NAD(+) oxidoreductase activity","type":"related"},{"name":"xanthine/NAD+ oxidoreductase activity","type":"related"},{"name":"xanthine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0004854"}


id: FYPO:0001837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"increased duration of protein localization to mitotic SPB","type":"exact"},{"name":"increased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001837"}


id: PBO:0066394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 4","termid":"PBO:0066394"}


id: PBO:0058220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4510","termid":"PBO:0058220"}


id: PBO:0066490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 1","termid":"PBO:0066490"}


id: GO:0034284
data:
  {"annotated_genes":["SJAG_03081","SJAG_02444","SJAG_01699","SJAG_00472","SJAG_00574","SJAG_04312","SJAG_01254","SJAG_04026","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107872,117554,108468,118587,108818,103793,96123,111000,111511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monosaccharide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to monosaccharide stimulus","type":"exact"}],"termid":"GO:0034284","terms_by_termid":{"GO:0010619":null}}


id: PBO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho2","termid":"PBO:0002511"}


id: PBO:0040181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 2","termid":"PBO:0040181"}


id: PBO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acatalasia","termid":"PBO:0004989"}


id: MONDO:0030376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Martsolf syndrome","termid":"MONDO:0023910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Martsolf syndrome 2","secondary_identifiers":["MEDGEN:1779703","OMIM:619420","UMLS:C5543626"],"synonyms":[{"name":"MARTS2","type":"exact"}],"termid":"MONDO:0030376","xrefs":{"Monarch":{"xref_id":"0030376"}}}


id: PBO:0120031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific trancription factor Pc OR mating-type transcription factor (Pc-like)","termid":"PBO:0120031"}


id: PBO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 3","termid":"PBO:0047342"}


id: MONDO:0014182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the ELMOD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 88","secondary_identifiers":["OMIM:615429","UMLS:C2829267","DOID:0110533","MEDGEN:811084","GARD:22649"],"synonyms":[{"name":"DFNB88","type":"narrow"},{"name":"ELMOD3 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 88","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 88","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in ELMOD3","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 88","type":"narrow"},{"name":"deafness, autosomal recessive 88","type":"narrow"},{"name":"deafness, autosomal recessive type 88","type":"narrow"}],"termid":"MONDO:0014182","xrefs":{"Monarch":{"xref_id":"0014182"}}}


id: PBO:0066405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA proto-oncogene, NF-kB subunit","termid":"PBO:0066405"}


id: MONDO:0019859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital thyroid malformation without hypothyroidism (obsolete MONDO:0019859)","secondary_identifiers":["Orphanet:95718"],"termid":"MONDO:0019859","xrefs":{"Monarch":{"xref_id":"0019859"}}}


id: PBO:0054348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1741","termid":"PBO:0054348"}


id: MONDO:0003687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the endocardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neoplasm of endocardium","termid":"MONDO:0021378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0004992"],"is_obsolete":false,"name":"endocardium cancer","secondary_identifiers":["DOID:5877","SCTID:363436001","UMLS:C0346612","MEDGEN:91107","NCIT:C4570"],"synonyms":[{"name":"cancer of endocardium","type":"exact"},{"name":"endocardium cancer","type":"exact"},{"name":"malignant endocardial neoplasm","type":"exact"},{"name":"malignant endocardial tumor","type":"exact"},{"name":"malignant endocardial tumour","type":"exact"},{"name":"malignant endocardium neoplasm","type":"exact"},{"name":"malignant neoplasm of endocardium","type":"exact"},{"name":"malignant neoplasm of the endocardium","type":"exact"},{"name":"malignant tumor of endocardium","type":"exact"},{"name":"malignant tumor of the endocardium","type":"exact"},{"name":"malignant tumour of endocardium","type":"exact"},{"name":"malignant tumour of the endocardium","type":"exact"}],"termid":"MONDO:0003687","xrefs":{"Monarch":{"xref_id":"0003687"}}}


id: MONDO:1010938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, rabbit","secondary_identifiers":["OMIA:000615-9986"],"termid":"MONDO:1010938","xrefs":{"Monarch":{"xref_id":"1010938"}}}


id: GO:0006425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamine to glutaminyl-tRNA, catalyzed by glutaminyl-tRNA synthetase. The glutaminyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"glutaminyl-tRNA aminoacylation","termid":"GO:0006425"}


id: PBO:0029213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_cell_wall_during_vegetative_growth","termid":"PBO:0029213"}


id: MONDO:0008230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxidase, salivary","secondary_identifiers":["UMLS:C1868425","MEDGEN:401440","OMIM:170990"],"synonyms":[{"name":"SAPX","type":"related"},{"name":"peroxidase, salivary","type":"exact"}],"termid":"MONDO:0008230","xrefs":{"Monarch":{"xref_id":"0008230"}}}


id: PBO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 34","termid":"PBO:0071493"}


id: MONDO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, 5","secondary_identifiers":["DOID:0070368","MEDGEN:1710326","GARD:16395","OMIM:618935","UMLS:C5394542"],"synonyms":[{"name":"CGD5","type":"exact"},{"name":"GRANULOMATOUS DISEASE, CHRONIC, AUTOSOMAL RECESSIVE, 5","type":"exact"},{"name":"Granulomatous Disease, Chronic, Due to Cybc1 Deficiency","type":"exact"},{"name":"chronic granulomatous disease 5, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, 5","type":"exact"}],"termid":"MONDO:0030066","xrefs":{"Monarch":{"xref_id":"0030066"}}}


id: GO:0099523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the cytosol consisting of all cytosol that is part of the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic region","termid":"GO:0099522"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"presynaptic cytosol","termid":"GO:0099523"}


id: FYPO:0006192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has no septum, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000005","FYPO:0000002","FYPO:0005447","FYPO:0000257","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"normal volume aseptate spheroid vegetative cell","synonyms":[{"name":"normal volume aseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006192"}


id: MONDO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fractures of the short, constricted portion of the thigh bone between the femur head and the trochanters. It excludes intertrochanteric fractures which are HIP FRACTURES.","definition_xrefs":["MESH:D005265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hip fracture","termid":"MONDO:0005327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"femoral neck fracture","secondary_identifiers":["SCTID:5913000"],"synonyms":[{"name":"bone fracture of neck of femur","type":"exact"},{"name":"femoral neck fracture","type":"exact"},{"name":"femur neck fracture","type":"related"},{"name":"femur neck fractures","type":"related"},{"name":"fracture of hip","type":"related"},{"name":"fracture of neck of femur","type":"exact"},{"name":"neck of femur bone fracture","type":"exact"},{"name":"nof - fracture of neck of femur","type":"related"}],"termid":"MONDO:0043589","xrefs":{"Monarch":{"xref_id":"0043589"}}}


id: FYPO:0008292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the cell division site plasma membrane is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatidylinositol-4,5-bisphosphate level in plasma membrane","termid":"FYPO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased phosphatidylinositol-4,5-bisphosphate level in the cell division site plasma membrane","synonyms":[{"name":"increased cell sivision site plasma membrane PI(4,5)P2 level","type":"exact"}],"termid":"FYPO:0008292"}


id: MONDO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma that has spread beyond the eye e.g. to brain, soft tissue/bone, bone marrow.","definition_xrefs":["NCIT:C7848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"extraocular retinoblastoma","secondary_identifiers":["DOID:4656","MEDGEN:75861","UMLS:C0278719"],"synonyms":[{"name":"extraocular retinoblastoma","type":"exact"},{"name":"metastatic retinoblastoma","type":"exact"}],"termid":"MONDO:0003078","xrefs":{"Monarch":{"xref_id":"0003078"}}}


id: PBO:0017666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Capping enzyme Triphosphatase","termid":"PBO:0017666"}


id: GO:1900059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["PMID:7601277","PMID:7891681","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of sulfate assimilation","termid":"GO:1900058"},{"relation_name":"positively_regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfate assimilation","synonyms":[{"name":"activation of sulfate assimilation","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"activation of sulphate assimilation","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulphate assimilation","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulfate assimilation","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulphate assimilation","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulfate assimilation","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulphate assimilation","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulfate assimilation","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulphate assimilation","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900059"}


id: PBO:0045397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 4","termid":"PBO:0045397"}


id: PBO:0028761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-post-anaphase_array_absent_from_cell","termid":"PBO:0028761"}


id: GO:0043082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a plant egg cell. This nucleus is found at the micropylar end of the embryo.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"megagametophyte egg cell nucleus","termid":"GO:0043082"}


id: PBO:0084187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus; component of the small subunit processome complex, which is required for processing of pre-18S rRNA; ortholog of mammalian fibrillarin; inviability of the null mutant is functionally complemented by human FBL","termid":"PBO:0084187"}


id: PBO:0055919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A7, pseudogene","termid":"PBO:0055919"}


id: MONDO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"excessive tearing","termid":"MONDO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epiphora due to insufficient drainage","secondary_identifiers":["MEDGEN:509862","UMLS:C0155234","DOID:13756","icd11.foundation:2073269541","ICD9:375.22","SCTID:85042000"],"termid":"MONDO:0001792","xrefs":{"Monarch":{"xref_id":"0001792"}}}


id: PBO:0077411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 147","termid":"PBO:0077411"}


id: GO:0090388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a phagosome membrane to a lysosome membrane that occurs as a part of apoptotic cell clearance. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome-lysosome docking","termid":"GO:0090384"},{"relation_name":"part_of","term_name":"phagolysosome assembly involved in apoptotic cell clearance","termid":"GO:0090387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0140056","GO:0008150","GO:0016192","GO:0006810","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"phagosome-lysosome docking involved in apoptotic cell clearance","termid":"GO:0090388"}


id: PBO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_mitotic_S_phase","termid":"PBO:0034560"}


id: PBO:0082197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoicase; converts allantoate to urea and ureidoglycolate in the second step of allantoin degradation; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082197"}


id: GO:1905780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kmv","PMID:17401362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905780"}


id: GO:0099634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynaptic membrane","termid":"GO:0045211"},{"relation_name":"part_of","term_name":"postsynaptic specialization","termid":"GO:0099572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization membrane","termid":"GO:0099634"}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: MONDO:0030875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 5","secondary_identifiers":["GARD:16427","MEDGEN:1756201","OMIM:619141","UMLS:C5436884"],"synonyms":[{"name":"FTDALS5","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 5","type":"exact"}],"termid":"MONDO:0030875","xrefs":{"Monarch":{"xref_id":"0030875"}}}


id: PBO:0049772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 11","termid":"PBO:0049772"}


id: GO:0100052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates G1/S transition of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by transcription from RNA polymerase II promoter (obsolete GO:0100052)","termid":"GO:0100052"}


id: PBO:0074354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC2 divergent transcript","termid":"PBO:0074354"}


id: GO:0048223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Network composed of hemicelluloses; members of a class of plant cell wall polysaccharide that cannot be extracted from the wall by hot water or chelating agents, but can be extracted by aqueous alkali. Includes xylan, glucuronoxylan, arabinoxylan, arabinogalactan II, glucomannan, xyloglucan and galactomannan.","definition_xrefs":["GOC:jid","DOI:10.1016/j.foodchem.2008.11.065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"hemicellulose network","termid":"GO:0048223"}


id: PBO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox","termid":"PBO:0080192"}


id: GO:2000440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"regulation of TLR15 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000440"}


id: GO:0140997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H4.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0016301","GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H4 kinase activity","termid":"GO:0140997"}


id: PBO:0024840
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae DSS1","termid":"PBO:0024840"}


id: PBO:0076051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin domain containing 1","termid":"PBO:0076051"}


id: PBO:0001059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102 (predicted)","termid":"PBO:0001059"}


id: PR:O74512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.02","synonyms":[{"name":"Spom972h-wtf14","type":"exact"}],"termid":"PR:O74512"}


id: MONDO:1011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, non-human animal","secondary_identifiers":["OMIA:000177"],"termid":"MONDO:1011836","xrefs":{"Monarch":{"xref_id":"1011836"}}}


id: FYPO:0001609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular ornithine level","termid":"FYPO:0001564"},{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar ornithine level","synonyms":[{"name":"decreased level of ornithine in vacuole","type":"exact"},{"name":"decreased vacuolar L-ornithine level","type":"exact"},{"name":"decreased vacuolar ornithine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar ornithine level during vegetative growth","type":"exact"},{"name":"reduced level of ornithine in vacuole","type":"exact"},{"name":"reduced vacuolar ornithine level","type":"exact"}],"termid":"FYPO:0001609"}


id: PBO:0092035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine (ugc), mitochondrial","termid":"PBO:0092035"}


id: GO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a higher than normal number of multicellular organisms living per unit area.","definition_xrefs":["PMID:26439857","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to high population density","synonyms":[{"name":"response to crowding","type":"exact"}],"termid":"GO:0090664"}


id: MOD:00400
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group, with both a gain of oxygen and loss of a nitrogen and a hydrogen.","definition_xrefs":["DeltaMass:32","OMSSA:4","Unimod:7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated residue","synonyms":[{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"Deamidation of Asparagine and Glutamine to Aspartate and Glutamate","type":"exact"},{"name":"dNRes","type":"exact"},{"name":"deamidationkq","type":"exact"}],"termid":"MOD:00400"}


id: GO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-based cuticle development (obsolete GO:0007592)","synonyms":[{"name":"protein-based cuticle anabolism","type":"exact"},{"name":"protein-based cuticle biosynthetic process","type":"exact"},{"name":"protein-based cuticle development","type":"exact"},{"name":"protein-based cuticle formation","type":"exact"},{"name":"protein-based cuticle synthesis","type":"exact"}],"termid":"GO:0007592"}


id: PBO:0044843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130B","termid":"PBO:0044843"}


id: PATO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent from","termid":"PATO:0002424"}


id: GO:0010417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucuronoxylan, a polymer containing a beta-1,4-linked D-xylose backbone substituted with glucuronic acid residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronoxylan metabolic process","termid":"GO:0010413"},{"relation_name":"is_a","term_name":"xylan biosynthetic process","termid":"GO:0045492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"glucuronoxylan biosynthetic process","synonyms":[{"name":"glucuronoxylan anabolism","type":"exact"},{"name":"glucuronoxylan biosynthesis","type":"exact"},{"name":"glucuronoxylan formation","type":"exact"},{"name":"glucuronoxylan synthesis","type":"exact"}],"termid":"GO:0010417"}


id: PBO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMA domain containing 2","termid":"PBO:0050465"}


id: PBO:0091381
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umol/min/mg","termid":"PBO:0091381"}


id: PBO:0087150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent DExD/H-box ATPase; required for activation of spliceosome before first transesterification step in RNA splicing; implicated in rearranging and proofreading snRNA structure in catalytic activation of spliceosome; ortholog of human protein DHX16","termid":"PBO:0087150"}


id: MONDO:0006340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of glands with serous epithelial cells in a fibrotic stroma.","definition_xrefs":["NCIT:C40031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"serous adenofibroma","termid":"MONDO:0024886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian serous adenofibroma","secondary_identifiers":["MEDGEN:309514","DOID:5474","EFO:1000428","UMLS:C1518729"],"synonyms":[{"name":"ovarian serous adenofibroma","type":"exact"},{"name":"ovary serous adenofibroma","type":"exact"},{"name":"serous adenofibroma of ovary","type":"exact"}],"termid":"MONDO:0006340","xrefs":{"Monarch":{"xref_id":"0006340"}}}


id: GO:0019470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trans-4-hydroxy-L-proline, C5H9NO3, a derivative of the amino acid proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxyproline metabolic process","termid":"GO:0019471"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"trans-4-hydroxy-L-proline catabolic process","secondary_identifiers":["MetaCyc:HYDROXYPRODEG-PWY"],"synonyms":[{"name":"4-hydroxyproline breakdown","type":"exact"},{"name":"4-hydroxyproline catabolism","type":"exact"},{"name":"4-hydroxyproline degradation","type":"exact"}],"termid":"GO:0019470"}


id: GO:0032435
data:
  {"annotated_genes":["SJAG_00475","SJAG_03048","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79103,108922],"is_not":false,"summary":null,"term":"GO:0032435"},{"annotations":[104308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"is_a","term_name":"negative regulation of proteasomal protein catabolic process","termid":"GO:1901799"},{"relation_name":"is_a","term_name":"negative regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000059"},{"relation_name":"negatively_regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"inhibition of proteasomal ubiquitin-dependent protein catabolic process","type":"narrow"}],"termid":"GO:0032435","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: MONDO:1012556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, ass","secondary_identifiers":["OMIA:002521-9793"],"termid":"MONDO:1012556","xrefs":{"Monarch":{"xref_id":"1012556"}}}


id: GO:1901850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["GOC:yaf","PMID:14593448","UniPathway:UPA00072","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolism","type":"exact"},{"name":"coenzyme F0 metabolism","type":"exact"}],"termid":"GO:1901850"}


id: GO:0017101
data:
  {"annotated_genes":["SJAG_01259","SJAG_01197","SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72496,78508,79933],"is_not":false,"summary":null,"term":"GO:0017101"}]},"cv_name":"cellular_component","definition":"A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates.","definition_xrefs":["GOC:jl","PMID:16169847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_01197":null,"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"aminoacyl-tRNA synthetase multienzyme complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aminoacyl-tRNA synthetase complex","type":"exact"},{"name":"multisynthetase complex","type":"exact"}],"termid":"GO:0017101","terms_by_termid":{"GO:0017101":null}}


id: GO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"prosthetic group catabolic process","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"prosthetic group breakdown","type":"exact"},{"name":"prosthetic group catabolism","type":"exact"},{"name":"prosthetic group degradation","type":"exact"}],"termid":"GO:0051190"}


id: SO:0000566
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_C_cluster","synonyms":[{"name":"V VJ J C cluster","type":"exact"},{"name":"V-(VJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000566"}


id: GO:0141170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of positive regulation of 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway.","definition_xrefs":["PMID:36478523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","termid":"GO:0141169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","termid":"GO:0141170"}


id: PBO:0028354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CTD_phosphatase_activity","termid":"PBO:0028354"}


id: MOD:00761
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with one hexose sugar group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"monohexosylated (Hex1)","synonyms":[{"name":"Hex1","type":"exact"}],"termid":"MOD:00761"}


id: GO:0031406
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to a carboxylic acid, an organic acid containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carboxylic acid binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031406","terms_by_termid":{"GO:0016594":null}}


id: GO:0018220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to an oxygen (O) atom in a threonine residue to form peptidyl-O-palmitoyl-L-threonine.","definition_xrefs":["RESID:AA0079"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine palmitoylation (obsolete GO:0018220)","synonyms":[{"name":"peptidyl-threonine O-palmitoylation","type":"exact"}],"termid":"GO:0018220"}


id: GO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly or disassembly of intermediate filaments by the addition or removal of component parts from a filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"},{"relation_name":"part_of","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"}


id: MONDO:0100288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive retinopathy in which patients have increased sensitivity to blue light; perception of blue light is mediated by what is normally the least populous cone photoreceptor subtype, the S (short wavelength, blue) cones. Characteristics include visual loss, with night blindness occurring from early in life, varying degrees of L (long, red)- and M (middle, green)-cone vision, and retinal degeneration.","definition_xrefs":["OMIM:268100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"enhanced S-cone syndrome","secondary_identifiers":["ICD10CM:H35.5","MESH:C564835","MEDGEN:341446","DOID:0090059","UMLS:C1849394"],"synonyms":[{"name":"ESCS","type":"related"},{"name":"enhanced S-cone syndrome","type":"exact"},{"name":"retinoschisis with early nyctalopia","type":"related"}],"termid":"MONDO:0100288","xrefs":{"Monarch":{"xref_id":"0100288"}}}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: PBO:0085790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; associates with meiosis-specific protein Spo1p","termid":"PBO:0085790"}


id: PR:O74919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rnc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"RNA-binding protein that suppresses calcineurin deletion 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rnc1","type":"exact"}],"termid":"PR:O74919"}


id: GO:0070707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA dinucleotide insertion","termid":"GO:0070707"}


id: MONDO:0003863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of malignant peripheral nerve sheath tumor. It is characterized by the presence of malignant cells that contain melanin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant melanocytic neoplasm of the peripheral nerve sheath","secondary_identifiers":["SCTID:404039004","MEDGEN:99184","ICD9:171.9","NCIT:C4748","UMLS:C0474847","DOID:6345"],"synonyms":[{"name":"malignant melanocytic neoplasm of peripheral nerve sheath","type":"exact"},{"name":"malignant melanocytic neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"malignant melanocytic peripheral nerve sheath tumor","type":"exact"},{"name":"malignant melanocytic peripheral nerve sheath tumour","type":"exact"},{"name":"malignant melanotic peripheral nerve sheath tumor","type":"exact"},{"name":"malignant melanotic peripheral nerve sheath tumour","type":"exact"},{"name":"melanocytic MPNST","type":"exact"},{"name":"melanotic malignant nerve sheath tumor","type":"exact"},{"name":"melanotic malignant nerve sheath tumour","type":"exact"},{"name":"melanotic malignant peripheral nerve sheath tumor","type":"exact"},{"name":"melanotic malignant peripheral nerve sheath tumor (morphologic abnormality)","type":"exact"},{"name":"melanotic malignant peripheral nerve sheath tumour","type":"exact"},{"name":"melanotic malignant peripheral nerve sheath tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003863","xrefs":{"Monarch":{"xref_id":"0003863"}}}


id: MONDO:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that arises from small cutaneous nerves, is locally aggressive, and has a potential for metastasis. Characteristic histopathologic features include proliferating atypical spindle cells with slender wavy and pointed nuclei, hypocellular areas, and areas featuring organized whorls of fibroblastic proliferation. The most common primary sites are the extremities, retroperitoneum, and trunk. These tumors tend to present in childhood, often in association with neurofibromatosis 1. (From DeVita et al., Cancer: Principles & Practice of Oncology, 5th ed, p1662; Mayo Clin Proc 1990 Feb;65(2):164-72)","definition_xrefs":["MESH:D018319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibrosarcoma","secondary_identifiers":["GARD:8211","UMLS:C0206729","MEDGEN:104927","DOID:3512","SCTID:404037002"],"synonyms":[{"name":"neurosarcoma","type":"exact"},{"name":"neurosarcoma [obs]","type":"exact"}],"termid":"MONDO:0002675","xrefs":{"Monarch":{"xref_id":"0002675"}}}


id: MONDO:0032886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Liang-Wang syndrome","secondary_identifiers":["UMLS:C5231479","MEDGEN:1684847","Orphanet:664438","OMIM:618729"],"synonyms":[{"name":"LIANG-WANG SYNDROME","type":"related"},{"name":"LIWAS","type":"related"}],"termid":"MONDO:0032886","xrefs":{"Monarch":{"xref_id":"0032886"}}}


id: MONDO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, skin tumor disorder characterized by childhood-onset of multiple, benign, asymptomatic, white to flesh-colored papules predominantly located on the face, ears, neck and trunk, not associated with systemic organ involvement, associated malignancies or FLCN gene locus mutation.","definition_xrefs":["Orphanet:538756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial multiple discoid fibromas","secondary_identifiers":["GARD:8479","MESH:C536847","OMIM:190340","UMLS:C1860850","MEDGEN:348201"],"synonyms":[{"name":"FMDF","type":"exact"},{"name":"discoid fibromas, familial multiple","type":"related"},{"name":"familial multiple trichodiscomas","type":"related"},{"name":"hereditary multiple trichodiscomas","type":"related"},{"name":"small benign fibrovascular tumor of the dermal part of the hair disk","type":"related"},{"name":"small benign fibrovascular tumour of the dermal part of the hair disc","type":"related"},{"name":"trichodiscomas, familial multiple","type":"related"}],"termid":"MONDO:0008594","xrefs":{"Monarch":{"xref_id":"0008594"}}}


id: GO:1902819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethyl acetate.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000068","GOC:TermGenie","PMID:16013377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"ethyl acetate metabolic process","termid":"GO:1902818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate biosynthetic process","synonyms":[{"name":"ethyl acetate anabolism","type":"exact"},{"name":"ethyl acetate biosynthesis","type":"exact"},{"name":"ethyl acetate formation","type":"exact"},{"name":"ethyl acetate synthesis","type":"exact"},{"name":"ethyl ethanoate biosynthetic process","type":"exact"}],"termid":"GO:1902819"}


id: MONDO:0033635
data:
  {"annotated_genes":["SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87566],"is_not":false,"summary":null,"term":"MONDO:0033635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03173":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619046","MEDGEN:1764816","GARD:16404","DOID:0070492","UMLS:C5436682"],"synonyms":[{"name":"MC4DN3","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 3","type":"exact"}],"termid":"MONDO:0033635","terms_by_termid":{"MONDO:0033635":null},"xrefs":{"Monarch":{"xref_id":"0033635"}}}


id: GO:0003337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","synonyms":[{"name":"metanephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0003337"}


id: FYPO:0004791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22959349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"increased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"increased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004791"}


id: PBO:0040071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 2","termid":"PBO:0040071"}


id: PBO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1 (predicted)","termid":"PBO:0034787"}


id: PBO:0028377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_xanthine_DNA_N-glycosylase_activity","termid":"PBO:0028377"}


id: PBO:0076323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synergin gamma","termid":"PBO:0076323"}


id: PBO:0029445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity","termid":"PBO:0029445"}


id: GO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of conjugation, the union or introduction of genetic information from compatible mating types that results in a genetically different individual.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of conjugation (obsolete GO:0046999)","termid":"GO:0046999"}


id: PBO:0017869
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi1 Binding Partner","termid":"PBO:0017869"}


id: PBO:0039505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 3","termid":"PBO:0039505"}


id: PBO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CSL","termid":"PBO:0001773"}


id: GO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell acquires the specialized features of a plasma cell. A plasma cell is a lymphocyte which develops from a B cell and produces high amounts of antibody.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma cell differentiation","synonyms":[{"name":"plasma cell development","type":"related"}],"termid":"GO:0002317"}


id: PBO:0005314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23 (predicted)","termid":"PBO:0005314"}


id: PBO:0041172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruton tyrosine kinase","termid":"PBO:0041172"}


id: GO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"}


id: PR:O94470
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC23G7.14 gene.","definition_xrefs":["UniProtKB:O94470","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23G7.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.14","synonyms":[{"name":"Spom972h-SPBC23G7.14","type":"exact"}],"termid":"PR:O94470"}


id: FYPO:0006243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is abnormal over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PMID:28825727","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006243)","synonyms":[{"name":"abnormal short range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal short range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"abnormal short range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006243"}


id: PBO:0066268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member B","termid":"PBO:0066268"}


id: FYECO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glutamate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glutamate","termid":"FYECO:0000084"}


id: MONDO:0044974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of supramolecular complex (obsolete MONDO:0044974)","termid":"MONDO:0044974","xrefs":{"Monarch":{"xref_id":"0044974"}}}


id: PBO:0040879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 4","termid":"PBO:0040879"}


id: GO:0032183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein binding","termid":"GO:0032182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SUMO binding","synonyms":[{"name":"Smt3 binding","type":"related"},{"name":"Smt3 monomer binding","type":"narrow"}],"termid":"GO:0032183"}


id: FYPO:0005347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus has a pointed shape during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:12390246","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"pointed nucleus during mitotic interphase","synonyms":[{"name":"pointed nucleus during interphase of mitotic cell cycle","type":"exact"},{"name":"pointed nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005347"}


id: PBO:0065938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac GTPase activating protein 1","termid":"PBO:0065938"}


id: MONDO:0011618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver fibrocystic disease and polydactyly","secondary_identifiers":["OMIM:605944","MEDGEN:381278","UMLS:C1853827","MESH:C565272"],"synonyms":[{"name":"liver fibrocystic disease and polydactyly","type":"exact"}],"termid":"MONDO:0011618","xrefs":{"Monarch":{"xref_id":"0011618"}}}


id: GO:0140595
data:
  {"annotated_genes":["SJAG_00569","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112400,113792],"is_not":false,"summary":null,"term":"GO:0140595"}]},"cv_name":"cellular_component","definition":"A large mitochondrial outer membrane translocase complex that mediates transport of proteins into mitochondrial compartments. MIM constitutes the major integration site for alpha-helical embedded proteins. In yeast, consists oof Mim1 and Mim2.","definition_xrefs":["PMID:33035511","PMID:19944477","PMID:22467864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_02361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MIM complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial outer import machinery","type":"exact"}],"termid":"GO:0140595","terms_by_termid":{"GO:0140595":null}}


id: FYECO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing xylose as the carbon source, yeast extract and other components. The concentration of xylose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose YE","synonyms":[{"name":"xylose rich medium","type":"broad"}],"termid":"FYECO:0000414"}


id: PBO:0085050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; deletion mutant is synthetically sick or lethal with alpha-synuclein","termid":"PBO:0085050"}


id: PBO:0055071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2488","termid":"PBO:0055071"}


id: MONDO:0034121
data:
  {"annotated_genes":["SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87898],"is_not":false,"summary":null,"term":"MONDO:0034121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy","termid":"MONDO:0014960"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"NAD(P)HX dehydratase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1681210","GARD:17990","OMIM:618321","Orphanet:555402","UMLS:C5193026"],"synonyms":[{"name":"ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN EDEMA AND/OR LEUKOENCEPHALOPATHY, 2","type":"related"},{"name":"PEBEL2","type":"related"}],"termid":"MONDO:0034121","terms_by_termid":{"MONDO:0034121":null},"xrefs":{"Monarch":{"xref_id":"0034121"}}}


id: GO:0098903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane repolarization during an action potential. Membrane repolarization is the process in which membrane potential changes in the repolarizing direction, towards the resting potential.","definition_xrefs":["GOC:dph","GOC:dos","ISBN:978-0-07-139011-8","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization","termid":"GO:0060306"},{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"membrane repolarization during action potential","termid":"GO:0086011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during action potential","termid":"GO:0098903"}


id: GO:1905542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:14718525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"negatively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-arginine import across plasma membrane","secondary_identifiers":["GO:1902827"],"synonyms":[{"name":"down regulation of L-arginine import into cell","type":"exact"},{"name":"downregulation of L-arginine import into cell","type":"exact"},{"name":"inhibition of L-arginine import into cell","type":"narrow"},{"name":"negative regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905542"}


id: PBO:0057718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-3","termid":"PBO:0057718"}


id: MONDO:0014676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the LMNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 3, autosomal recessive","secondary_identifiers":["DOID:0070248","GARD:18209","MEDGEN:413212","OMIM:616516","UMLS:C2750035","MESH:C567633"],"synonyms":[{"name":"EDMD3","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 3, autosomal recessive","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 3, autosomal recessive","type":"exact"},{"name":"LMNA autosomal recessive Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal recessive Emery-Dreifuss muscular dystrophy caused by mutation in LMNA","type":"exact"}],"termid":"MONDO:0014676","xrefs":{"Monarch":{"xref_id":"0014676"}}}


id: PBO:0082866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: PBO:0073833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 9","termid":"PBO:0073833"}


id: PBO:0072625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 14 homolog","termid":"PBO:0072625"}


id: PBO:0051945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPK1 antisense RNA 1","termid":"PBO:0051945"}


id: PBO:0050144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3","termid":"PBO:0050144"}


id: MONDO:0004638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to a non-Hodgkin lymphoma composed of small and medium sized lymphocytes.","definition_xrefs":["NCIT:C26919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymphosarcoma","secondary_identifiers":["MEDGEN:811370","GARD:6946","ICD9:200.1","ICD9:200.7","UMLS:C3714542","SCTID:118601006","SCTID:188498009","DOID:8675","ICD9:200.10","SCTID:373168002","NCIT:C27824","ICD9:200.0"],"synonyms":[{"name":"diffuse lymphoma","type":"exact"},{"name":"lymphosarcoma","type":"exact"},{"name":"malignant lymphoma (category)","type":"related"}],"termid":"MONDO:0004638","xrefs":{"Monarch":{"xref_id":"0004638"}}}


id: PBO:0046349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7","termid":"PBO:0046349"}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: PR:O94429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor G 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02366","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-releasing factor 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.10","secondary_identifiers":["UniProtKB:O94429"],"synonyms":[{"name":"EF-G2mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RRF2mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GFM2","type":"exact"},{"name":"elongation factor G 2, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mEF-G 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94429"}


id: PBO:0005097
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic mRNA Interception","termid":"PBO:0005097"}


id: PBO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing_during_vegetative_growth","termid":"PBO:0035889"}


id: GO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous ATP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in vertebrate species.","definition_xrefs":["GOC:krc","PMID:17786051"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing ATP as source of linkage phosphate (obsolete GO:0000969)","termid":"GO:0000969"}


id: GO:1900061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in calcium-mediated signaling.","definition_xrefs":["GOC:TermGenie","PMID:9407035","PMID:9407036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling (obsolete GO:1900061)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium signalling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium signalling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of calcium-mediated signalling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of calcium ion signaling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium signaling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium signalling","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of calcium-mediated signalling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium signaling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium signalling","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"exact"}],"termid":"GO:1900061"}


id: MONDO:0002135
data:
  {"annotated_genes":["SJAG_02656","SJAG_04376","SJAG_02384","SJAG_03972","SJAG_01630","SJAG_03957","SJAG_MIT03","SJAG_02848","SJAG_01179","SJAG_01816","SJAG_03588","SJAG_MIT15","SJAG_02007","SJAG_02641","SJAG_MIT13"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[87381,87380,87382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[87734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020737"},{"annotations":[88685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015011"},{"annotations":[87222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033549"},{"annotations":[87611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008135"},{"annotations":[88100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957935"},{"annotations":[87895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957978"},{"annotations":[87299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[87507,87508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012543"},{"annotations":[87272,87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014571"},{"annotations":[88470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007429"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder affecting the optic nerve (second cranial nerve).","definition_xrefs":["NCIT:C79698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01179":null,"SJAG_01630":null,"SJAG_01816":null,"SJAG_02007":null,"SJAG_02384":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02848":null,"SJAG_03588":null,"SJAG_03957":null,"SJAG_03972":null,"SJAG_04376":null,"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"is_obsolete":false,"name":"optic nerve disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:854546","MESH:D009901","SCTID:77157004","UMLS:C3887709","ICD9:377.49","DOID:1891","ICD9:377.9"],"synonyms":[{"name":"cranial nerve II disease","type":"exact"},{"name":"cranial nerve II disease or disorder","type":"exact"},{"name":"disease of cranial nerve II","type":"exact"},{"name":"disease or disorder of cranial nerve II","type":"exact"},{"name":"disorder of cranial nerve II","type":"exact"},{"name":"disorder of the second nerve","type":"exact"},{"name":"optic nerve disorder","type":"exact"},{"name":"optic neuropathy","type":"exact"},{"name":"second cranial nerve disorder","type":"exact"}],"termid":"MONDO:0002135","terms_by_termid":{"MONDO:0007429":null,"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0008135":null,"MONDO:0010788":null,"MONDO:0012543":null,"MONDO:0014571":null,"MONDO:0015011":null,"MONDO:0020737":null,"MONDO:0033549":null,"MONDO:0957935":null,"MONDO:0957978":null},"xrefs":{"Monarch":{"xref_id":"0002135"}}}


id: GO:0019060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a viral protein within the host cell.","definition_xrefs":["PMID:9188566","ISBN:0781702534","GOC:ai","ISBN:0781718325","PMID:11581394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont intracellular protein transport in host","termid":"GO:0030581"},{"relation_name":"part_of","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular transport of viral protein in host cell","secondary_identifiers":["GO:0046801","GO:0046742","GO:0046743","Reactome:R-HSA-168874"],"synonyms":[{"name":"cytoplasmic viral capsid transport","type":"narrow"},{"name":"intracellular transport of viral capsid in host cell","type":"narrow"},{"name":"intracellular transport of viral capsid protein in host cell","type":"narrow"},{"name":"intracellular transport of viral proteins in host cell","type":"exact"},{"name":"intracellular viral capsid transport","type":"narrow"},{"name":"intracellular viral protein transport","type":"exact"},{"name":"nuclear viral capsid transport","type":"narrow"},{"name":"viral capsid transport in host cell cytoplasm","type":"narrow"},{"name":"viral capsid transport in host cell nucleus","type":"narrow"}],"termid":"GO:0019060"}


id: PBO:0091926
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091926"}


id: MONDO:0018063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodular non-suppurative panniculitis, known as Weber-Christian disease (WCD), is a rare skin disorder characterized by recurring inflammation in the subcutaneous layer of fat.","definition_xrefs":["Orphanet:33577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nodular non-suppurative panniculitis","secondary_identifiers":["DOID:1525","GARD:7879","EFO:1000742","MedDRA:10047883","SCTID:33760009","MEDGEN:10559","MESH:D010201","UMLS:C0030328"],"synonyms":[{"name":"Pfeiffer-Weber-Christian syndrome","type":"exact"},{"name":"Relapsing febrile nodular nonsuppurative panniculitis","type":"exact"},{"name":"Relapsing febrile nodular panniculitis","type":"exact"},{"name":"WCD","type":"exact"},{"name":"Weber - Christian disease","type":"exact"},{"name":"Weber Christian disease","type":"related"},{"name":"Weber-Christian disease","type":"exact"},{"name":"Weber-Christian panniculitis","type":"exact"},{"name":"idiopathic lobular panniculitis","type":"exact"},{"name":"idiopathic nodular panniculitis","type":"exact"},{"name":"nodular non-suppurative febrile panniculitis","type":"exact"},{"name":"nodular nonsuppurative panniculitis","type":"exact"},{"name":"panniculitis nodular nonsuppurative","type":"related"}],"termid":"MONDO:0018063","xrefs":{"Monarch":{"xref_id":"0018063"}}}


id: MONDO:0800337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute tubulointerstitial nephritis","secondary_identifiers":["MEDGEN:334716","UMLS:C1843274"],"synonyms":[{"name":"ATIN","type":"exact"}],"termid":"MONDO:0800337","xrefs":{"Monarch":{"xref_id":"0800337"}}}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","PMID:8423010","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: PBO:0068569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 20, pseudogene","termid":"PBO:0068569"}


id: PBO:0057730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1305","termid":"PBO:0057730"}


id: PBO:0069582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 856, pseudogene","termid":"PBO:0069582"}


id: MONDO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucinous cystadenocarcinoma that involves the pancreas.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic cystadenocarcinoma","termid":"MONDO:0002867"},{"relation_name":"is_a","term_name":"mucinous cystadenocarcinoma","termid":"MONDO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic mucinous cystadenocarcinoma","secondary_identifiers":["UMLS:C2063873","MEDGEN:1433902","NCIT:C5713","DOID:7234"],"synonyms":[{"name":"colloid Cystadencarcinoma of pancreas","type":"exact"},{"name":"colloid Cystadencarcinoma of the pancreas","type":"exact"},{"name":"colloidal Cystadencarcinoma of pancreas","type":"exact"},{"name":"colloidal Cystadencarcinoma of the pancreas","type":"exact"},{"name":"mucinous Cystadencarcinoma of pancreas","type":"exact"},{"name":"mucinous Cystadencarcinoma of the pancreas","type":"exact"},{"name":"pancreatic colloid Cystadencarcinoma","type":"exact"},{"name":"pancreatic colloid cystadenocarcinoma","type":"related"},{"name":"pancreatic colloidal Cystadencarcinoma","type":"exact"},{"name":"pancreatic mucinous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0004156","xrefs":{"Monarch":{"xref_id":"0004156"}}}


id: GO:0071215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abscisic acid","termid":"GO:0009737"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to abscisic acid stimulus","termid":"GO:0071215"}


id: FYPO:0007422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) does not occur.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"abolished mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"abolished mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"mitotic spindle microtubule nucleation from spindle pole body abolished","type":"exact"}],"termid":"FYPO:0007422"}


id: MONDO:0019149
data:
  {"annotated_genes":["SJAG_00158","SJAG_04790","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87167,87168,87169],"is_not":false,"summary":null,"term":"MONDO:0019149"}]},"cv_name":"mondo","definition":"A form of lysosomal acid lipase deficiency characterized by progressive cholesterol esters and triglyceride accumulation in tissues and organs typically presenting with hepatosplenomegaly, liver dysfunction and/or dyslipidemia.","definition_xrefs":["Orphanet:75234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal acid lipase deficiency","termid":"MONDO:0800449"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"cholesteryl ester storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:894336362","OMIM:278000","GARD:12099","DOID:14502","NANDO:1200144","NORD:929","UMLS:C0008384","NANDO:2201233","MEDGEN:40266","SCTID:57218003"],"synonyms":[{"name":"CESD","type":"related"},{"name":"LAL deficiency, partial","type":"exact"},{"name":"LIPA deficiency, partial","type":"exact"},{"name":"cholesterol ester hydrolase deficiency, partial","type":"exact"},{"name":"cholesterol ester storage disease","type":"exact"},{"name":"lysosomal acid lipase deficiency, partial","type":"exact"},{"name":"lysosomal and lipase deficiency","type":"related"}],"termid":"MONDO:0019149","terms_by_termid":{"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019149"}}}


id: MOD:00746
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a tungsten atom or a cluster containing tungsten for hydrogen atoms, or that coordinates a tungsten ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tungsten containing modified residue","synonyms":[{"name":"WRes","type":"exact"}],"termid":"MOD:00746"}


id: GO:0047293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: p-hydroxybenzoate + solanesyl pyrophosphate = nonaprenyl-4-hydroxybenzoate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxybenzoate nonaprenyltransferase activity (obsolete GO:0047293)","termid":"GO:0047293"}


id: GO:1902706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetate.","definition_xrefs":["PMID:19539744","GO_REF:0000093","PMID:18727018","GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to acetate (obsolete GO:1902706)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"hexose breakdown to acetate","type":"exact"},{"name":"hexose catabolism to acetate","type":"exact"},{"name":"hexose degradation to acetate","type":"exact"}],"termid":"GO:1902706"}


id: GO:1901779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentalenolactone.","definition_xrefs":["PMID:17178094","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"pentalenolactone catabolic process","synonyms":[{"name":"pentalenolactone breakdown","type":"exact"},{"name":"pentalenolactone catabolism","type":"exact"},{"name":"pentalenolactone degradation","type":"exact"}],"termid":"GO:1901779"}


id: FYPO:0007057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from recycling endosomes to the Golgi is abnormal.","definition_xrefs":["GO:0071955","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal recycling endosome to Golgi transport","synonyms":[{"name":"abnormal recycling endosome to Golgi transport during mitotic cell cycle","type":"related"},{"name":"abnormal recycling endosome to Golgi transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007057"}


id: GO:0050435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving amyloid-beta, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta metabolic process","synonyms":[{"name":"amyloid-beta metabolism","type":"exact"},{"name":"beta-amyloid metabolic process","type":"exact"},{"name":"beta-amyloid metabolism","type":"exact"}],"termid":"GO:0050435"}


id: PBO:0058181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4475","termid":"PBO:0058181"}


id: MONDO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"Fanconi anemia, complementation group W","secondary_identifiers":["DOID:0060978","MEDGEN:1621245","UMLS:C4521564","OMIM:617784"],"synonyms":[{"name":"FANCW","type":"related"},{"name":"Fanconi anemia, complementation group W","type":"exact"}],"termid":"MONDO:0044325","xrefs":{"Monarch":{"xref_id":"0044325"}}}


id: GO:0032220
data:
  {"annotated_genes":["SJAG_00870","SJAG_04887","SJAG_02878","SJAG_02924","SJAG_02351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79570,94246,97206,98289,112186],"is_not":false,"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"The joining of two or more lipid bilayer membranes that surround cells, that contributes to cytogamy.","definition_xrefs":["GOC:mah","PMID:29134248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"cytogamy","termid":"GO:0000755"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0061024"],"is_obsolete":false,"name":"plasma membrane fusion involved in cytogamy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070872"],"synonyms":[{"name":"plasma membrane fusion during cytogamy","type":"related"},{"name":"plasma membrane organization involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0032220","terms_by_termid":{"GO:0032220":null}}


id: PBO:0109055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein Ank1","termid":"PBO:0109055"}


id: GO:0004359
data:
  {"annotated_genes":["SJAG_00964","SJAG_02618","SJAG_03775","SJAG_00691","SJAG_00392"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65348,79432,80162,95316,113086],"is_not":false,"summary":null,"term":"GO:0004359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH4+.","definition_xrefs":["RHEA:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00691":null,"SJAG_00964":null,"SJAG_02618":null,"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glutaminase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70609","EC:3.5.1.2"],"synonyms":[{"name":"L-glutaminase activity","type":"related"},{"name":"L-glutamine amidohydrolase activity","type":"related"},{"name":"glutaminase I","type":"related"},{"name":"glutamine aminohydrolase activity","type":"related"}],"termid":"GO:0004359","terms_by_termid":{"GO:0004359":null}}


id: GO:0097493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell, providing elasticity and recoiling.","definition_xrefs":["PMID:23283722","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}


id: MONDO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myelofibrosis with myeloid metaplasia is a myeloproliferative disease with annual incidence of approximately 1 case per 100,000 individuals and age at diagnosis around 60 (an increased prevalence is noted in Ashkenazi Jews). Clinical manifestations depend on the type of blood cell affected and may include anemia, pallor, splenomegaly, hypermetabolic state, petechiae, ecchymosis, bleeding, lymphadenopathy, hepatomegaly, portal hypertension.","definition_xrefs":["Orphanet:824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"primary myelofibrosis","secondary_identifiers":["GARD:8618","ICD9:289.83","ONCOTREE:PMF","ICD9:238.76","DOID:4971","UMLS:C0001815","ICDO:9961/3","NCIT:C2862","MEDGEN:7929","icd11.foundation:1407285327","icd11.foundation:336704235","EFO:0002430","MESH:D055728","NORD:1611","OMIM:254450"],"synonyms":[{"name":"AMM","type":"exact"},{"name":"Agnogenic myeloid metaplasia","type":"exact"},{"name":"CIMF","type":"exact"},{"name":"aleukemic myelosis","type":"exact"},{"name":"bone marrow fibrosis","type":"exact"},{"name":"chronic idiopathic myelofibrosis","type":"exact"},{"name":"idiopathic bone marrow fibrosis","type":"exact"},{"name":"idiopathic myelofibrosis","type":"exact"},{"name":"megakaryocytic myelosclerosis","type":"exact"},{"name":"myelofibrosis","type":"related"},{"name":"myelofibrosis with myeloid metaplasia","type":"narrow"},{"name":"myelofibrosis with myeloid metaplasia, somatic","type":"exact"},{"name":"myelofibrosis, somatic","type":"exact"},{"name":"myeloid metaplasia","type":"related"},{"name":"myelosclerosis","type":"exact"},{"name":"myelosclerosis with myeloid metaplasia","type":"exact"},{"name":"osteomyelofibrosis","type":"exact"},{"name":"primary myelofibrosis","type":"exact"}],"termid":"MONDO:0009692","xrefs":{"Monarch":{"xref_id":"0009692"}}}


id: GO:0038011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which internalization of a signaling receptor stops, prevents, or reduces the frequency, rate or extent of signal transduction. Receptor internalization can attenuate or reduce the strength of signaling by reducing the concentration of cell surface receptors available to ligands.","definition_xrefs":["PMID:19696798","GOC:bf","GOC:signaling","PMID:17908284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of signal transduction by receptor internalization","termid":"GO:0038009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"negative regulation of signal transduction by receptor internalization","synonyms":[{"name":"negative regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038011"}


id: PBO:0087518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin","termid":"PBO:0087518"}


id: MONDO:0016261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sarcoma of the corpus uteri (obsolete MONDO:0016261)","termid":"MONDO:0016261","xrefs":{"Monarch":{"xref_id":"0016261"}}}


id: MONDO:0012679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the PLEKHM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 6","secondary_identifiers":["UMLS:C1969093","DOID:0110945","MEDGEN:409754","GARD:4156","OMIM:611497","MESH:C566931","Orphanet:210110"],"synonyms":[{"name":"OPTB6","type":"exact"},{"name":"PLEKHM1 osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive intermediate osteopetrosis","type":"exact"},{"name":"autosomal recessive osteopetrosis intermediate form","type":"exact"},{"name":"autosomal recessive osteopetrosis type 6","type":"exact"},{"name":"intermediate osteopetrosis","type":"related"},{"name":"osteopetrosis (disease) caused by mutation in PLEKHM1","type":"exact"},{"name":"osteopetrosis autosomal recessive 6","type":"related"},{"name":"osteopetrosis autosomal recessive intermediate form","type":"related"},{"name":"osteopetrosis, autosomal recessive 6","type":"related"},{"name":"osteopetrosis, autosomal recessive type 6","type":"exact"},{"name":"osteopetrosis, autosomal recessive, Intermediate form","type":"related"}],"termid":"MONDO:0012679","xrefs":{"Monarch":{"xref_id":"0012679"}}}


id: PBO:0043088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol induced regulator of metabolism RNA","termid":"PBO:0043088"}


id: MONDO:0025095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any of a group of infections of fowl caused by protozoa of the genera plasmodium, Leucocytozoon, and Haemoproteus. The life cycles of these parasites and the disease produced bears strong resemblance to those observed in human malaria.","definition_xrefs":["MESH:D008289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"protozoan infections, animal","termid":"MONDO:0025114"},{"relation_name":"is_a","term_name":"vector-borne disease, non-human animal","termid":"MONDO:0700114"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malaria, avian","synonyms":[{"name":"Avian Malarias","type":"related"},{"name":"Avian malaria","type":"related"},{"name":"Malarias, Avian","type":"related"}],"termid":"MONDO:0025095","xrefs":{"Monarch":{"xref_id":"0025095"}}}


id: PBO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10","termid":"PBO:0047419"}


id: PBO:0056591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MyoD family inhibitor domain containing 2","termid":"PBO:0056591"}


id: PBO:0041786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPSL divergent transcript","termid":"PBO:0041786"}


id: PBO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 3","termid":"PBO:0062000"}


id: SO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene_member_region that encodes sequence that directly contributes to the molecular function of its gene or gene product.","definition_xrefs":["Clingen:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_gene_region","synonyms":[{"name":"functional gene region","type":"exact"}],"termid":"SO:0002188"}


id: GO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromate sensitivity/resistance (obsolete GO:0019831)","synonyms":[{"name":"chromate sensitivity/resistance","type":"exact"}],"termid":"GO:0019831"}


id: PBO:0012524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_formation_of","termid":"PBO:0012524"}


id: PBO:0064914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 3","termid":"PBO:0064914"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: SO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_thiouridine","secondary_identifiers":["RNAMOD:058"],"synonyms":[{"name":"4-thiouridine","type":"exact"},{"name":"four thiouridine","type":"exact"},{"name":"s4U","type":"exact"}],"termid":"SO:0001350"}


id: PBO:0051766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 9","termid":"PBO:0051766"}


id: MONDO:0017976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of sex development of gynecological interest (obsolete MONDO:0017976)","secondary_identifiers":["Orphanet:325620"],"synonyms":[{"name":"DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017976","xrefs":{"Monarch":{"xref_id":"0017976"}}}


id: PATO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000113 radiation sensitivity (obsolete PATO:0000113)","termid":"PATO:0000113"}


id: PBO:0062509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily I member 1 pseudogene","termid":"PBO:0062509"}


id: PATO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep quality defined by the mathematic properties of the relative time frames of the sleep cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality of a process","termid":"PATO:0001530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep pattern","termid":"PATO:0000062"}


id: PR:Q9HDW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB2B4.06 gene.","definition_xrefs":["UniProtKB:Q9HDW5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0644 protein PB2B4.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.06","synonyms":[{"name":"Spom972h-SPAPB2B4.06","type":"exact"}],"termid":"PR:Q9HDW5"}


id: GO:0060362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air that is part of the organism's response to external or internal stimuli resulting in flight.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"},{"relation_name":"is_a","term_name":"flight","termid":"GO:0060361"},{"relation_name":"part_of","term_name":"flight behavior","termid":"GO:0007629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight involved in flight behavior","termid":"GO:0060362"}


id: PBO:0027092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stably_decreased_rDNA_copy_number_during_vegetative_growth","termid":"PBO:0027092"}


id: GO:2000317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 type immune response","synonyms":[{"name":"negative regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000317"}


id: PBO:0083574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF YHR073W; identified by expression profiling and mass spectrometry","termid":"PBO:0083574"}


id: FYPO:0000022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell forms a mating projection with a longer tip than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo morphology","termid":"FYPO:0000357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000301"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"shmoo with long tip","synonyms":[{"name":"cell morphology, shmoos with long tips","type":"exact"},{"name":"conjugation tube with long tip","type":"exact"},{"name":"long, straight shmoos","type":"exact"},{"name":"mating projection with long tip","type":"exact"},{"name":"straight and long shmoos","type":"exact"}],"termid":"FYPO:0000022"}


id: PBO:0029450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_galactomannan_level","termid":"PBO:0029450"}


id: PBO:0089084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm4","termid":"PBO:0089084"}


id: PBO:0086945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for alpha-factor pheromone; seven transmembrane-domain GPCR that interacts with both pheromone and a heterotrimeric G protein to initiate the signaling response that leads to mating between haploid a and alpha cells","termid":"PBO:0086945"}


id: GO:1901780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentalenolactone.","definition_xrefs":["GOC:yaf","PMID:17178094","UniPathway:UPA00974","MetaCyc:PWY-6915","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone biosynthetic process","synonyms":[{"name":"pentalenolactone anabolism","type":"exact"},{"name":"pentalenolactone biosynthesis","type":"exact"},{"name":"pentalenolactone formation","type":"exact"},{"name":"pentalenolactone synthesis","type":"exact"}],"termid":"GO:1901780"}


id: GO:0085039
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[121662],"is_not":false,"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"A host-derived membrane surrounding the symbiont hypha during infection.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal membrane","references_by_uniquename":{"PMID:30726171":null},"synonyms":[{"name":"extra-invasive hyphal membrane","type":"related"}],"termid":"GO:0085039","terms_by_termid":{"GO:0085039":null}}


id: GO:0170001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ergothioneine from one side of a membrane to the other.","definition_xrefs":["PMID:29530864","PMID:15795384","PMID:20601551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ergothioneine transmembrane transporter activity","termid":"GO:0170001"}


id: MONDO:0015945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Polymalformative genetic syndrome with increased risk of developing cancer (PGSIRC) comprises a wide range of syndromes characterized by congenital malformations with a high risk of developing tumors including up to 50 different rare diseases.","definition_xrefs":["Orphanet:183422"],"gene_count":0,"genotype_count":0,"name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","synonyms":[{"name":"PGSIRC","type":"exact"}],"termid":"MONDO:0015945","xrefs":{"Monarch":{"xref_id":"0015945"}}}


id: PBO:0061961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 25","termid":"PBO:0061961"}


id: PBO:0091745
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPBC18H10.16 was previously designated as can1","termid":"PBO:0091745"}


id: MONDO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is characterized by the presence of a papillary growth pattern.","definition_xrefs":["NCIT:C6983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary squamous carcinoma","termid":"MONDO:0002979"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary carcinoma of the penis","secondary_identifiers":["MEDGEN:235455","UMLS:C1335322","DOID:8013"],"synonyms":[{"name":"papillary carcinoma of penis","type":"exact"},{"name":"papillary carcinoma of the penis","type":"exact"},{"name":"papillary penile carcinoma","type":"exact"},{"name":"papillary penile squamous carcinoma","type":"exact"},{"name":"papillary squamous carcinoma of penis","type":"exact"},{"name":"papillary squamous carcinoma of the penis","type":"exact"},{"name":"penis papillary carcinoma","type":"exact"},{"name":"squamous carcinoma of penis, papillary type","type":"exact"},{"name":"squamous carcinoma of the penis, papillary type","type":"exact"}],"termid":"MONDO:0004433","xrefs":{"Monarch":{"xref_id":"0004433"}}}


id: GO:2001133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methanethiol.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006790"],"is_obsolete":false,"name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}


id: PBO:0056026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 4","termid":"PBO:0056026"}


id: FYECO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nitrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNO3","synonyms":[{"name":"+ silver nitrate","type":"exact"}],"termid":"FYECO:0000250"}


id: PBO:0065907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab9 effector protein with kelch motifs","termid":"PBO:0065907"}


id: GO:0102483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + scopolin = beta-D-glucose + scopoletin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete scopolin beta-glucosidase activity (obsolete GO:0102483)","termid":"GO:0102483"}


id: PBO:0028590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_growth","termid":"PBO:0028590"}


id: FYPO:0008180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the RNA polymerase II CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II CTD binding","termid":"FYPO:0008180"}


id: MONDO:0015190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leiomyosarcoma of small intestine (obsolete MONDO:0015190)","termid":"MONDO:0015190","xrefs":{"Monarch":{"xref_id":"0015190"}}}


id: GO:0042881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-galactonate, the D-enantiomer of galactonate, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","GOC:mah","ISBN:0815340729","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-galactonate transmembrane transporter activity","termid":"GO:0042881"}


id: PBO:0075210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin alpha 1","termid":"PBO:0075210"}


id: PR:G2TRT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor C1348.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.12","synonyms":[{"name":"Spom972h-SPBC1348.12","type":"exact"}],"termid":"PR:G2TRT1"}


id: PBO:0004526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 1 adaptor protein Pop1","termid":"PBO:0004526"}


id: PBO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 157","termid":"PBO:0075108"}


id: GO:0022601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of physiological phases, occurring in the endometrium during the menstrual cycle that recur at regular intervals during the reproductive years. The menstrual cycle is an ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:jid","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle phase","termid":"GO:0022601"}


id: GO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisol","termid":"GO:0051414"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisol stimulus","synonyms":[{"name":"cellular response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0071387"}


id: PBO:0026653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane_at_cell_division_site_during_vegetative_growth","termid":"PBO:0026653"}


id: PBO:0084659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria-associated F-box protein; involved in maintenance of normal mitochondrial morphology; interacts with Skp1p through the F-box motif; preferentially localizes to the mother cell during budding","termid":"PBO:0084659"}


id: MONDO:0015729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 16 is a rare chromosomal anomaly syndrome with a highly variable phenotype ranging from minor anomalies with normal development to intrauterine growth retardation, abnormal skin pigmentation, craniofacial and body asymmetry, cardiac (e.g. ventricular septal defect) and genital (e.g. hypospadias, cryptorchidism) anomalies, scoliosis and hearing loss to neonatal death. Additional features observed include skeletal malformations (e.g. clino/polydactyly, talipes), mild facial dysmorphism, and developmental delay.","definition_xrefs":["Orphanet:1708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 trisomy","termid":"MONDO:0022180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 16","secondary_identifiers":["MEDGEN:1633950","SCTID:764621006","UMLS:C4707009","GARD:18741","MESH:C538041"],"synonyms":[{"name":"Mosaic trisomy chromosome 16","type":"exact"},{"name":"Mosaic trisomy type 16","type":"exact"},{"name":"trisomy 16 mosaicism","type":"exact"}],"termid":"MONDO:0015729","xrefs":{"Monarch":{"xref_id":"0015729"}}}


id: PBO:0061149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 1","termid":"PBO:0061149"}


id: FYPO:0006773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore septin ring does not occur.","definition_xrefs":["PMID:20123972","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to prospore septin ring","synonyms":[{"name":"abolished protein localisation to prospore septin ring","type":"exact"},{"name":"abolished protein localization to forespore septin ring","type":"exact"},{"name":"abolished protein localization to septin ring during prospore membrane assembly","type":"exact"},{"name":"protein localization to prospore septin ring abolished","type":"exact"}],"termid":"FYPO:0006773"}


id: PBO:0039792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 3","termid":"PBO:0039792"}


id: GO:0032750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-26 production","termid":"GO:0032670"},{"relation_name":"positively_regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-26 production","secondary_identifiers":["GO:0045538"],"synonyms":[{"name":"activation of interleukin-26 production","type":"narrow"},{"name":"positive regulation of IL-26 production","type":"exact"},{"name":"positive regulation of interleukin-26 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-26 production","type":"narrow"},{"name":"up regulation of interleukin-26 production","type":"exact"},{"name":"up-regulation of interleukin-26 production","type":"exact"},{"name":"upregulation of interleukin-26 production","type":"exact"}],"termid":"GO:0032750"}


id: SO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a change at the 5th base pair after the start of the intron in the orientation of the transcript.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_5th_base_variant","synonyms":[{"name":"splice donor 5th base variant","type":"exact"}],"termid":"SO:0001787"}


id: GO:0003387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron that contributes to the progression of the amphid sensory gland.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}


id: GO:0009481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.9.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete aa3-type cytochrome c oxidase (obsolete GO:0009481)","synonyms":[{"name":"aa3-type cytochrome c oxidase","type":"exact"}],"termid":"GO:0009481"}


id: GO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme metabolic process (obsolete GO:0051198)","synonyms":[{"name":"down regulation of coenzyme metabolic process","type":"exact"},{"name":"down-regulation of coenzyme metabolic process","type":"exact"},{"name":"downregulation of coenzyme metabolic process","type":"exact"},{"name":"inhibition of coenzyme metabolic process","type":"narrow"},{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"negative regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"negative regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051198"}


id: GO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide at neutral pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase II activity (obsolete GO:0004294)","synonyms":[{"name":"tripeptidyl-peptidase II activity","type":"exact"}],"termid":"GO:0004294"}


id: MONDO:0005437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome comprising testicular germ cell cancer, cryptorchidism and some cases of hypospadias and male infertility with impaired development of the testis.","definition_xrefs":["EFO:0004893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular dysgenesis syndrome","secondary_identifiers":["MEDGEN:754060","SCTID:445338005","NANDO:2200383","UMLS:C2919755"],"termid":"MONDO:0005437","xrefs":{"Monarch":{"xref_id":"0005437"}}}


id: GO:0060039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery.","definition_xrefs":["GOC:rph","PMID:16376438","GOC:dph","PMID:15138308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardium development","termid":"GO:0060039"}


id: PBO:0083008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific secreted protein with similarity to glucanases; degrades cell wall from the daughter side causing daughter to separate from mother; localizes in birth scars; expression is repressed by cAMP","termid":"PBO:0083008"}


id: PBO:0054896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2310","termid":"PBO:0054896"}


id: PBO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug174","termid":"PBO:0017064"}


id: GO:1903515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from cytosol to endoplasmic reticulum.","definition_xrefs":["GOC:rl","GOC:TermGenie","GO_REF:0000078","PMID:16402920","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"calcium ion transport from cytosol to endoplasmic reticulum","termid":"GO:1903515"}


id: PBO:0081749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 679","termid":"PBO:0081749"}


id: PBO:0075552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEG neighbor","termid":"PBO:0075552"}


id: MONDO:0006207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinosarcoma that arises from the fallopian tube. It usually affects postmenopausal women and presents with abdominal pain, abdominal distension or genital bleeding. The prognosis is usually poor.","definition_xrefs":["NCIT:C40124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube carcinosarcoma","secondary_identifiers":["MEDGEN:273294","EFO:1000252","UMLS:C1517117","DOID:1970"],"synonyms":[{"name":"fallopian tube carcinosarcoma","type":"exact"},{"name":"fallopian tube malignant mixed Mullerian tumor","type":"exact"},{"name":"fallopian tube malignant mixed Mullerian tumour","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (mullerian) tumor","type":"exact"},{"name":"fallopian tube malignant mixed mesodermal (mullerian) tumour","type":"exact"}],"termid":"MONDO:0006207","xrefs":{"Monarch":{"xref_id":"0006207"}}}


id: MONDO:0008212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pechet factor deficiency","secondary_identifiers":["UMLS:C1868545","OMIM:169200","MESH:C566814","MEDGEN:358349"],"synonyms":[{"name":"Dynia factor deficiency","type":"related"},{"name":"Pechet factor deficiency","type":"exact"}],"termid":"MONDO:0008212","xrefs":{"Monarch":{"xref_id":"0008212"}}}


id: MONDO:0009054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2A","termid":"MONDO:0018163"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2, classic type","secondary_identifiers":["GARD:17546","SCTID:73856006","UMLS:C5679922","DOID:0070141","MEDGEN:1825992","MESH:C562632","Orphanet:357074"],"synonyms":[{"name":"ARCL2, Debre type","type":"exact"},{"name":"ARCL2, Debré type","type":"exact"},{"name":"ARCL2, classic type","type":"exact"},{"name":"ARCL2A","type":"related"},{"name":"Arcl2","type":"related"},{"name":"autosomal recessive cutis laxa type 2, Debre type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, Debré type","type":"exact"},{"name":"autosomal recessive cutis laxa type II classic type","type":"related"}],"termid":"MONDO:0009054","xrefs":{"Monarch":{"xref_id":"0009054"}}}


id: GO:0036323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor-1 (VEGFR-1) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:uh","GOC:bf","Wikipedia:VEGF_receptors","Wikipedia:FLT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor-1 signaling pathway","synonyms":[{"name":"FLT1 signaling pathway","type":"exact"},{"name":"VEGFR-1 signaling pathway","type":"exact"},{"name":"VEGFR1 signaling pathway","type":"exact"}],"termid":"GO:0036323"}


id: PBO:0004697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S10 (predicted)","termid":"PBO:0004697"}


id: GO:0060689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the cells of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}


id: FYPO:0002476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000257","FYPO:0000004","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"viable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"viable vegetative misshapen vacuolated cell","type":"related"},{"name":"viable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0002476"}


id: PBO:0057143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 222","termid":"PBO:0057143"}


id: GO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to DNA, typically within region of the promoter and transcribed region, to promote readthrough of a transcription termination site and thus extending the length of the RNA transcript produced. Examples of antitermination factors which bind DNA include the lambda Q protein.","definition_xrefs":["PMID:8332211","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"transcription antitermination factor activity, DNA binding","synonyms":[{"name":"DNA binding transcription antitermination factor activity","type":"exact"}],"termid":"GO:0001073"}


id: MONDO:0013357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare severe form of neurofibromatosis type 1 (NF1) characterized by mild facial dysmorphism, developmental delay, intellectual disability, increased risk of malignancies, and a large number of neurofibromas.","definition_xrefs":["Orphanet:97685"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"},{"relation_name":"is_a","term_name":"neurofibromatosis type 1","termid":"MONDO:0018975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"chromosome 17q11.2 deletion syndrome, 1.4Mb","secondary_identifiers":["DOID:0060403","MESH:C563524","SCTID:722122000","MEDGEN:1726802","Orphanet:137634","OMIM:613675","GARD:5408","UMLS:C5401456"],"synonyms":[{"name":"17q11 microdeletion syndrome","type":"exact"},{"name":"Del(17)(q11)","type":"exact"},{"name":"MMFD","type":"exact"},{"name":"NF1 microdeletion syndrome","type":"exact"},{"name":"NF1 microduplication syndrome","type":"exact"},{"name":"RNF135-related overgrowth syndrome","type":"exact"},{"name":"Van Asperen syndrome","type":"exact"},{"name":"chromosome 17q11.2 deletion syndrome","type":"exact"},{"name":"chromosome 17q11.2 deletion syndrome, 1.4-MB","type":"exact"},{"name":"macrocephaly, macrosomia, and facial dysmorphism syndrome","type":"exact"},{"name":"monosomy 17q11","type":"exact"},{"name":"neurofibromatosis 1 microdeletion syndrome","type":"exact"},{"name":"neurofibromatosis type 1 microdeletion syndrome","type":"exact"},{"name":"overgrowth-macrocephaly-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0013357","xrefs":{"Monarch":{"xref_id":"0013357"}}}


id: MONDO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-radio-ulnar synostosis","termid":"MONDO:0017983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-radio-ulnar synostosis, bilateral","secondary_identifiers":["Orphanet:295207","UMLS:C5438978","icd11.foundation:557249772","MEDGEN:1744773"],"synonyms":[{"name":"humero-radio-ulnar fusion, bilateral","type":"exact"}],"termid":"MONDO:0017549","xrefs":{"Monarch":{"xref_id":"0017549"}}}


id: PBO:0041236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 87","termid":"PBO:0041236"}


id: GO:0086030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adrenergic receptor signaling pathway that contributes to a reduction in cardiac muscle contraction. Beta-adrenergic receptor-induced cardiac relaxation is achieved by a GPCR-activated adenylate cyclase generating cAMP; cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the sarcoplasmic reticulum (SR) membrane protein PLB. In its non-phosphorylated state, PLB acts as an inhibitor of the ATPase Ca(2+) pump of the cardiac SR (SERCA2a); inhibition of the pump is relieved upon phosphorylation. The pump removes Ca(2+) from the cytoplasm, thereby preventing cytosolic Ca(2+)-dependent activation of contractile proteins, leading to enhanced muscle relaxation.","definition_xrefs":["PMID:10571541","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"},{"relation_name":"part_of","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation","synonyms":[{"name":"Gs-coupled adrenergic receptor signaling pathway involved in cardiac muscle relaxation","type":"exact"},{"name":"adrenergic receptor signaling pathway involved in cardiac muscle relaxation","type":"exact"},{"name":"adrenergic receptor signaling pathway involved in cardiac muscle relaxation via activation of AC","type":"related"},{"name":"adrenergic receptor-induced cardiac relaxation","type":"related"}],"termid":"GO:0086030"}


id: GO:0046425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via JAK-STAT.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["GO:0007262","GO:2000364"],"synonyms":[{"name":"STAT protein import into nucleus","type":"narrow"},{"name":"regulation of STAT protein import into nucleus","type":"narrow"},{"name":"regulation of STAT protein nuclear translocation","type":"narrow"}],"termid":"GO:0046425"}


id: PBO:0081498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 396","termid":"PBO:0081498"}


id: GO:0036222
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120655],"is_not":false,"summary":null,"term":"GO:0036222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: XTP + H2O = XMP + H+ + diphosphate.","definition_xrefs":["PMID:22531138","GOC:pz","PMID:16216582","RHEA:28610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0047429","GO:0016787"],"is_obsolete":false,"name":"XTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-1603","KEGG_REACTION:R02720","GO:0103024","Reactome:R-HSA-2509831"],"synonyms":[{"name":"XTP pyrophosphohydrolase activity","type":"exact"},{"name":"XTP/dITP diphosphatase","type":"related"},{"name":"XTPase activity","type":"exact"},{"name":"hypoxanthine/xanthine dNTP pyrophosphatase","type":"related"}],"termid":"GO:0036222","terms_by_termid":{"GO:0036222":null}}


id: PBO:0055370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2799","termid":"PBO:0055370"}


id: MONDO:0004509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive, papillary epithelial neoplasm that arises from the epithelium of the intrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct papillary neoplasm","termid":"MONDO:0003455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic biliary papillomatosis","secondary_identifiers":["UMLS:C1334258","DOID:8230","NCIT:C7125","MEDGEN:233574"],"synonyms":[{"name":"intrahepatic bile duct papillary neoplasm","type":"exact"},{"name":"intrahepatic bile duct papillomatosis","type":"exact"},{"name":"intrahepatic biliary papillomatosis","type":"exact"}],"termid":"MONDO:0004509","xrefs":{"Monarch":{"xref_id":"0004509"}}}


id: GO:0160118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(7) in tRNA + S-adenosyl-L-methionine = H+ + N(2)-methylguanosine(7) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:34669960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0003674","GO:0016741","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"tRNA (guanine(7)-N2)-methyltransferase activity","termid":"GO:0160118"}


id: GO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any virus-mediated process that modulates the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation by virus of viral protein levels in host cell","synonyms":[{"name":"regulation of viral protein levels","type":"exact"}],"termid":"GO:0046719"}


id: GO:0031030
data:
  {"annotated_genes":["SJAG_03353","SJAG_03592","SJAG_03681","SJAG_01464","SJAG_04455","SJAG_02514","SJAG_00526","SJAG_00229","SJAG_01386","SJAG_03508","SJAG_00883","SJAG_01790","SJAG_04943","SJAG_02169","SJAG_06270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74671,92608,93627,94736,94821,95350,97550,101520,103215,107007,109072,109205,109515,112161,117925],"is_not":false,"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of division septum assembly","termid":"GO:0010974"},{"relation_name":"is_a","term_name":"regulation of septation initiation signaling","termid":"GO:0031029"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"negative regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of septation initiation signaling","type":"exact"},{"name":"down-regulation of septation initiation signaling","type":"exact"},{"name":"downregulation of septation initiation signaling","type":"exact"},{"name":"inhibition of septation initiation signaling","type":"narrow"},{"name":"negative regulation of septation initiation network","type":"exact"},{"name":"negative regulation of septation initiation signaling cascade","type":"related"},{"name":"negative regulation of septation initiation signalling","type":"exact"}],"termid":"GO:0031030","terms_by_termid":{"GO:0031030":null}}


id: SO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Amino acid involved in the activity of an enzyme.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"},{"relation_name":"part_of","term_name":"polypeptide_catalytic_motif","termid":"SO:0100019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic_residue","secondary_identifiers":["BS:00026"],"synonyms":[{"name":"act_site","type":"related"},{"name":"active site residue","type":"exact"},{"name":"catalytic residue","type":"exact"}],"termid":"SO:0001104"}


id: GO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-delta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interferon-delta production","secondary_identifiers":["GO:0072646"],"synonyms":[{"name":"IFN-delta production","type":"exact"},{"name":"IFND production","type":"exact"},{"name":"interferon-delta secretion","type":"narrow"}],"termid":"GO:0072645"}


id: PBO:0055218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2644","termid":"PBO:0055218"}


id: PBO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 1","termid":"PBO:0070415"}


id: MONDO:0013542
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87788],"is_not":false,"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Any Moyamoya disease in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"Moyamoya disease 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614042","GARD:15746","UMLS:C3279690","MEDGEN:481320"],"synonyms":[{"name":"ACTA2 Moyamoya disease","type":"exact"},{"name":"MYMY5","type":"related"},{"name":"Moyamoya disease 5","type":"exact"},{"name":"Moyamoya disease caused by mutation in ACTA2","type":"exact"},{"name":"Moyamoya disease type 5","type":"exact"}],"termid":"MONDO:0013542","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0013542"}}}


id: GO:0018694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + p-cymene + 2 reduced [2Fe-2S]-[ferredoxin] = 4-isopropylbenzyl alcohol + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:51604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"p-cymene methyl hydroxylase activity","secondary_identifiers":["EC:1.14.15.25","UM-BBD_reactionID:r0392","MetaCyc:RXN-661"],"termid":"GO:0018694"}


id: GO:0030632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-alanine, the D-enantiomer of the amino acid alanine, i.e (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine biosynthetic process","termid":"GO:0006523"},{"relation_name":"is_a","term_name":"D-alanine metabolic process","termid":"GO:0046436"},{"relation_name":"is_a","term_name":"D-amino acid biosynthetic process","termid":"GO:0046437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-alanine biosynthetic process","synonyms":[{"name":"D-alanine anabolism","type":"exact"},{"name":"D-alanine biosynthesis","type":"exact"},{"name":"D-alanine formation","type":"exact"},{"name":"D-alanine synthesis","type":"exact"}],"termid":"GO:0030632"}


id: GO:0102295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-methylumbelliferyl glucoside + malonyl-CoA = 4-methylumbelliferone 6'-O-malonylglucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-methylumbelliferyl glucoside 6'-O-malonyltransferase activity (obsolete GO:0102295)","termid":"GO:0102295"}


id: PBO:0087824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit, involved in RNA pol II transcription initiation; possesses in vitro histone acetyltransferase activity but its role in vivo appears to be minor; involved in promoter binding and G1/S progression; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087824"}


id: GO:0021920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","PMID:12593981"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification (obsolete GO:0021920)","termid":"GO:0021920"}


id: PBO:0055839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand dependent nuclear receptor interacting factor 1","termid":"PBO:0055839"}


id: MONDO:0800351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 5","secondary_identifiers":["UMLS:C3150690","MEDGEN:462040"],"synonyms":[{"name":"LVNC5","type":"exact"}],"termid":"MONDO:0800351","xrefs":{"Monarch":{"xref_id":"0800351"}}}


id: PBO:0059630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 2","termid":"PBO:0059630"}


id: GO:2000288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"positively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast proliferation","termid":"GO:2000288"}


id: PBO:0091785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, feature may be longer","termid":"PBO:0091785"}


id: FYPO:0004232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished methylated histone binding","synonyms":[{"name":"methylated histone binding abolished","type":"exact"}],"termid":"FYPO:0004232"}


id: GO:0072354
data:
  {"annotated_genes":["SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80026],"is_not":false,"summary":null,"term":"GO:0072354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 3) + ATP = histone H3-phosphothreonine (position 3) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 3 of histone H3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00678":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0140096","GO:0003824","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"histone H3T3 kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"histone H3-T3 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-T3 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T3 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T3 specific)","type":"exact"}],"termid":"GO:0072354","terms_by_termid":{"GO:0072354":null}}


id: MONDO:0850099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"MIR140-related spondyloepiphyseal dysplasia","secondary_identifiers":["MEDGEN:1842455","Orphanet:623695","UMLS:C5680411","GARD:22495"],"termid":"MONDO:0850099","xrefs":{"Monarch":{"xref_id":"0850099"}}}


id: FYPO:0001999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased nucleoside diphosphate kinase activity","termid":"FYPO:0001999"}


id: MONDO:0033668
data:
  {"annotated_genes":["SJAG_03943"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87607],"is_not":false,"summary":null,"term":"MONDO:0033668"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 79","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112160","MEDGEN:1735338","OMIM:619086","UMLS:C5436772","GARD:18157"],"synonyms":[{"name":"DFNA79","type":"narrow"},{"name":"deafness, autosomal dominant 79","type":"narrow"}],"termid":"MONDO:0033668","terms_by_termid":{"MONDO:0033668":null},"xrefs":{"Monarch":{"xref_id":"0033668"}}}


id: MONDO:1011685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, non-human animal","secondary_identifiers":["OMIA:000113","OMIA:000112"],"synonyms":[{"name":"bleeding diathesis, non-human animal","type":"exact"}],"termid":"MONDO:1011685","xrefs":{"Monarch":{"xref_id":"1011685"}}}


id: MONDO:0006260
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A type of renal carcinoma affecting mostly young African-Americans. It is located in the medulla of the kidney, and follows an aggressive clinical course. Most reported cases have shown metastatic disease at the time of diagnosis.","definition_xrefs":["NCIT:C7572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney medullary carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:MRC","Orphanet:319319","GARD:13175","MONDO:0017888","UMLS:C4049328","NORD:1999","DOID:0070475","MedDRA:10064886","MEDGEN:888108","EFO:1000314"],"synonyms":[{"name":"Renal Medullary Carcinoma","type":"exact"},{"name":"carcinoma of renal medulla","type":"exact"},{"name":"kidney medullary carcinoma","type":"exact"},{"name":"renal medulla carcinoma","type":"exact"},{"name":"renal medullary carcinoma","type":"exact"}],"termid":"MONDO:0006260","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0006260"}}}


id: GO:0032287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature peripheral nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"myelination in peripheral nervous system","termid":"GO:0022011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system myelin maintenance","synonyms":[{"name":"myelin maintenance in peripheral nervous system","type":"exact"},{"name":"peripheral nervous system myelin sheath maintenance","type":"exact"}],"termid":"GO:0032287"}


id: GO:0032089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NACHT (NAIP, CIITA, HET-E and TP1) domain. The NACHT domain consists of seven distinct conserved motifs, including an ATP/GTPase specific P-loop, a Mg2+-binding site and five more specific motifs.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"NACHT domain binding","termid":"GO:0032089"}


id: GO:0018045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-lysine amide by hydrolysis and oxidation of an interior Lys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0092"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-lysine amidation (obsolete GO:0018045)","termid":"GO:0018045"}


id: PBO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-V, dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (predicted)","termid":"PBO:0000274"}


id: MONDO:0011745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duodenojejunal atresia with volvulus, absent dorsal mesentery, and absent superior mesenteric artery","secondary_identifiers":["UMLS:C1847196","MEDGEN:339705","MESH:C535722","OMIM:606894"],"synonyms":[{"name":"duodenojejunal atresia with volvulus, absent dorsal mesentery and absent superior mesenteric artery","type":"related"},{"name":"duodenojejunal atresia with volvulus, absent dorsal mesentery, and absent superior mesenteric artery","type":"exact"}],"termid":"MONDO:0011745","xrefs":{"Monarch":{"xref_id":"0011745"}}}


id: PBO:0053793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1047","termid":"PBO:0053793"}


id: PBO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression cell cycle regulated","termid":"PBO:0000436"}


id: MONDO:0035161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"progressive dementia with neuroserpin inclusion bodies","secondary_identifiers":["UMLS:C5680143","Orphanet:530303","GARD:22208","MEDGEN:1842194","ICD10CM:G40.3"],"synonyms":[{"name":"late-onset familial encephalopathy with neuroserpin inclusion bodies","type":"exact"}],"termid":"MONDO:0035161","xrefs":{"Monarch":{"xref_id":"0035161"}}}


id: GO:0018877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.","definition_xrefs":["UM-BBD_pathwayID:hch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexachlorocyclohexane metabolic process","termid":"GO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","synonyms":[{"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018877"}


id: RO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","termid":"RO:0002481"}


id: GO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a decrease in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of decreased arterial stretch","termid":"GO:0003024"}


id: MONDO:1012801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial disease characterized by central nervous system development delay that occurs in pigs due to a mutation in the SURF1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:29601977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, SURF1-related, pig","secondary_identifiers":["OMIA:002147-9823"],"termid":"MONDO:1012801","xrefs":{"Monarch":{"xref_id":"1012801"}}}


id: PBO:0082008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 6","termid":"PBO:0082008"}


id: PBQ:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1 due to nitrogen limitation. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence following G1 arrest","termid":"PBQ:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest due to nitrogen limitation","synonyms":[{"name":"cellular quiescence following G1 arrest due to nitrogen limitation","type":"exact"},{"name":"quiescence following G1 arrest due to nitrogen limitation","type":"broad"}],"termid":"PBQ:0000003"}


id: GO:0090067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the thalamus. The thalamus is a part of the diencephalon that is composed of the dorsal thalamus and the ventral thalamus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thalamus size","termid":"GO:0090067"}


id: FYECO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a MAP kinase inhibitor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MAP kinase inhibitor","synonyms":[{"name":"SP600125","type":"narrow"},{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000452"}


id: GO:0006366
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promoter","type":"exact"}],"termid":"GO:0006366","terms_by_termid":{"GO:0000122":null,"GO:0001174":null,"GO:0001193":null,"GO:0006357":null,"GO:0006366":null,"GO:0006367":null,"GO:0006368":null,"GO:0006369":null,"GO:0030847":null,"GO:0032968":null,"GO:0042789":null,"GO:0045815":null,"GO:0045899":null,"GO:0045944":null,"GO:0051123":null,"GO:0060261":null,"GO:0060963":null,"GO:0140673":null}}


id: GO:0099096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The giant, cup-shaped axon terminal of a vestibular afferent neuron, serving as a post-synaptic contact to a type I hair cell.","definition_xrefs":["PMID:25355208","PMID:10706428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vestibular calyx terminal","termid":"GO:0099096"}


id: PBO:0004899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HC03 family inorganic anion exchanger (predicted)","termid":"PBO:0004899"}


id: PBO:0086416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; member of the ODN family of nucleolar G-proteins","termid":"PBO:0086416"}


id: PBO:0049646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.Y histone 2","termid":"PBO:0049646"}


id: GO:0042415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine metabolic process","synonyms":[{"name":"levarterenol metabolic process","type":"exact"},{"name":"levarterenol metabolism","type":"exact"},{"name":"noradrenaline metabolic process","type":"exact"},{"name":"noradrenaline metabolism","type":"exact"},{"name":"norepinephrine metabolism","type":"exact"}],"termid":"GO:0042415"}


id: PBO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 28","termid":"PBO:0071026"}


id: PBO:0049333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 1","termid":"PBO:0049333"}


id: PBO:0077983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 5-1","termid":"PBO:0077983"}


id: MONDO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic fasciitis is a rare connective tissue disease that is characterized by inflammation and thickening of the fascia, usually associated with peripheral eosinophilia. It presents during adulthood with symmetrical and painful swelling of mainly the extremities that progressively become indurated. Fatigue, disabling cutaneous fibrosis, myositis and arthritis may also be observed.","definition_xrefs":["Orphanet:3165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"},{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"eosinophilic fasciitis","secondary_identifiers":["UMLS:C0264005","icd11.foundation:1977389237","MEDGEN:82673","HP:0045029","NCIT:C112116","OMIM:226350","MedDRA:10014954","MESH:C562487","ICD9:728.89","SCTID:24129002","GARD:6351"],"synonyms":[{"name":"EF","type":"related"},{"name":"Shulman syndrome","type":"exact"},{"name":"diffuse fasciitis with eosinophilia","type":"exact"},{"name":"eosinophilic fasciitis","type":"exact"},{"name":"eosinophilic fasciitis (disease)","type":"exact"}],"termid":"MONDO:0009175","xrefs":{"Monarch":{"xref_id":"0009175"}}}


id: MONDO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 1 is a congenital respiratory tract anomaly characterized by a supraglottic, interarytenoid cleft above the vocal folds with moderate respiratory symptoms.","definition_xrefs":["Orphanet:93938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 1","secondary_identifiers":["GARD:19236","MEDGEN:667239","UMLS:C0584823"],"synonyms":[{"name":"LTEC I","type":"exact"},{"name":"LTEC1","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 1","type":"exact"}],"termid":"MONDO:0019761","xrefs":{"Monarch":{"xref_id":"0019761"}}}


id: PBO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-OG-Fe(II) oxygenase superfamily protein","termid":"PBO:0002404"}


id: MONDO:0007210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachmann-de Lange-like facial changes with microcephaly, metatarsus adductus, and developmental delay","secondary_identifiers":["UMLS:C1862171","MEDGEN:396307","MESH:C566206","OMIM:112370"],"synonyms":[{"name":"Brachmann-de Lange-like facial changes with microcephaly, metatarsus adductus, and developmental delay","type":"exact"}],"termid":"MONDO:0007210","xrefs":{"Monarch":{"xref_id":"0007210"}}}


id: PR:000044737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 5 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PMID:28367989","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S5P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:3","type":"exact"},{"name":"rpb1/Phos(CTD-S5)","type":"exact"}],"termid":"PR:000044737"}


id: MONDO:0700015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 8 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 disorder","secondary_identifiers":["MEDGEN:539233","SCTID:48082007","UMLS:C0265418"],"synonyms":[{"name":"anomaly of chromosome pair 8","type":"exact"}],"termid":"MONDO:0700015","xrefs":{"Monarch":{"xref_id":"0700015"}}}


id: MONDO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomus tumor arising from the skin. It is characterized by the presence of dilated veins surrounded by glomus cells.","definition_xrefs":["NCIT:C6750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin glomus tumor","termid":"MONDO:0002295"},{"relation_name":"is_a","term_name":"glomangioma","termid":"MONDO:0002299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous glomangioma","secondary_identifiers":["DOID:2435","SCTID:403970001","MEDGEN:266155","UMLS:C1275226"],"synonyms":[{"name":"cutaneous glomangioma","type":"exact"},{"name":"glomangioma of skin","type":"exact"},{"name":"glomangioma of the skin","type":"exact"},{"name":"skin glomangioma","type":"exact"},{"name":"zone of skin glomangioma","type":"exact"}],"termid":"MONDO:0002298","xrefs":{"Monarch":{"xref_id":"0002298"}}}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","PMID:21768538","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: PBO:0084981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0084981"}


id: PBO:0053637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 683","termid":"PBO:0053637"}


id: GO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein metabolic process","synonyms":[{"name":"regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050746"}


id: MONDO:0002049
data:
  {"annotated_genes":["SJAG_01852","SJAG_04621","SJAG_04387","SJAG_01784","SJAG_02431","SJAG_02509","SJAG_04003","SJAG_01732","SJAG_03703","SJAG_03818","SJAG_02951","SJAG_04509","SJAG_02744"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88195,88196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[88482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[88813,88814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[87737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[86987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[89057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[89015,89017,89016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[88144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[88949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"A laboratory test result indicating that there is an abnormally small number of platelets in the circulating blood.","definition_xrefs":["NCIT:C3408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:302215000","DOID:1588","ICD9:287.5","MEDGEN:52737","icd11.foundation:683583694","MESH:D013921","UMLS:C0040034"],"synonyms":[{"name":"platelet count decreased","type":"exact"},{"name":"thrombocytopenic disorder","type":"exact"}],"termid":"MONDO:0002049","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0002049"}}}


id: PBO:0090310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Aps3","termid":"PBO:0090310"}


id: GO:1990137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RH + ROOH = ROH + ROH.","definition_xrefs":["PMID:19467604","EC:1.11.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"plant seed peroxygenase activity","secondary_identifiers":["MetaCyc:RXN-11819"],"synonyms":[{"name":"peroxygenase activity","type":"broad"},{"name":"plant seed peroxidase activity","type":"related"}],"termid":"GO:1990137"}


id: PBO:0074353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 2","termid":"PBO:0074353"}


id: MOD:01321
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:9448752","PubMed:11510821","PubMed:12422359","Unimod:176#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Michael addition of BHT quinone methide to cysteine and lysine","termid":"MOD:00534"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Michael addition of BHT quinone methide to cysteine","synonyms":[{"name":"BHT","type":"related"},{"name":"Michael addition of BHT quinone methide to Cysteine and Lysine","type":"related"}],"termid":"MOD:01321"}


id: PBO:0040456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11C","termid":"PBO:0040456"}


id: PBO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member b","termid":"PBO:0042389"}


id: PBO:0051998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JARID2 antisense RNA 1","termid":"PBO:0051998"}


id: SO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the start codon is changed, but the start remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_retained_variant","synonyms":[{"name":"snpEff:SYNONYMOUS_START","type":"exact"}],"termid":"SO:0002019"}


id: PBO:0041324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 divergent transcript","termid":"PBO:0041324"}


id: PBO:0085819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0085819"}


id: GO:0042706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"}


id: GO:1904719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA glutamate receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:hjd","PMID:21558424","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of postsynaptic membrane organization","termid":"GO:1901628"},{"relation_name":"is_a","term_name":"positive regulation of receptor clustering","termid":"GO:1903911"},{"relation_name":"is_a","term_name":"regulation of AMPA glutamate receptor clustering","termid":"GO:1904717"},{"relation_name":"positively_regulates","term_name":"AMPA glutamate receptor clustering","termid":"GO:0097113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of AMPA glutamate receptor clustering","synonyms":[{"name":"activation of AMPA glutamate receptor clustering","type":"narrow"},{"name":"activation of AMPA receptor clustering","type":"narrow"},{"name":"activation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"narrow"},{"name":"positive regulation of AMPA receptor clustering","type":"exact"},{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up regulation of AMPA receptor clustering","type":"exact"},{"name":"up regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"up-regulation of AMPA receptor clustering","type":"exact"},{"name":"up-regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA glutamate receptor clustering","type":"exact"},{"name":"upregulation of AMPA receptor clustering","type":"exact"},{"name":"upregulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor clustering","type":"exact"}],"termid":"GO:1904719"}


id: PBO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CZIB divergent transcript","termid":"PBO:0044515"}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["PMID:10961912","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: MONDO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation often associated with tuberous sclerosis. It is characterized by a mixture of epithelioid cells, smooth muscle, vessels, and mature adipose tissue. The kidney is the most common site of involvement. Other sites of involvement include the liver, lung, lymph nodes, and retroperitoneum. The vast majority of cases follow a benign clinical course. However, cases of metastatic angiomyolipomas with sarcomatoid features have been described.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomyolipoma","secondary_identifiers":["ICDO:8860/0","MEDGEN:64622","MESH:D018207","GARD:12024","UMLS:C0206633","DOID:3314","NCIT:C3734"],"synonyms":[{"name":"angiomyolipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002603","xrefs":{"Monarch":{"xref_id":"0002603"}}}


id: FYPO:0003470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is increased.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"increased RNA splicing, via spliceosome","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased mRNA splicing, via spliceosome","synonyms":[{"name":"increased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"increased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"increased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"increased splicing","type":"broad"}],"termid":"FYPO:0003470"}


id: GO:2000901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"dextrin catabolic process","termid":"GO:1901027"},{"relation_name":"is_a","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cyclodextrin catabolic process","synonyms":[{"name":"cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000901"}


id: MOD:01352
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to a nitrated L-tyrosine.","definition_xrefs":["OMSSA:86","PubMed:8839040","PubMed:14678012","Unimod:354#Y","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tyrosine","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitroy","type":"exact"}],"termid":"MOD:01352"}


id: PBO:0057912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3615","termid":"PBO:0057912"}


id: PBO:0084801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; almost completely overlaps ORF HVG1/YER039C","termid":"PBO:0084801"}


id: PR:O94710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04559","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.10","secondary_identifiers":["UniProtKB:O94710"],"synonyms":[{"name":"N6-L-threonylcarbamoyladenine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OSGEPL1","type":"exact"},{"name":"pombe glycoprotease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein pgp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein pgp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94710"}


id: FYPO:0007371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased cell population growth on sucrose carbon source","termid":"FYPO:0009076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth rate on sucrose carbon source","synonyms":[{"name":"enhanced growth on sucrose","type":"related"},{"name":"fast cell population growth on sucrose carbon source","type":"exact"},{"name":"increased cell population proliferation on sucrose carbon source","type":"related"},{"name":"increased cell proliferation on sucrose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on sucrose carbon source","type":"exact"}],"termid":"FYPO:0007371"}


id: PBO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 2","termid":"PBO:0052053"}


id: GO:0020038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mechanically stable cytoskeletal structure associated with the cytoplasmic face of the pellicle and surrounding the microtubule-based cytoskeleton.","definition_xrefs":["PMID:11420112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"subpellicular network","termid":"GO:0020038"}


id: MONDO:0700077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo-associated multiple autoimmune disease susceptibility 6","secondary_identifiers":["OMIM:193200","UMLS:C3277701","MEDGEN:479331"],"synonyms":[{"name":"VAMAS6","type":"exact"}],"termid":"MONDO:0700077","xrefs":{"Monarch":{"xref_id":"0700077"}}}


id: PBO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium_export","termid":"PBO:0030484"}


id: PBO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid1","termid":"PBO:0005391"}


id: PBO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 222 member B","termid":"PBO:0047214"}


id: MONDO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome (JS) is characterized by congenital malformation of the brainstem and agenesis or hypoplasia of the cerebellar vermis leading to an abnormal respiratory pattern, nystagmus, hypotonia, ataxia, and delay in achieving motor milestones.","definition_xrefs":["Orphanet:475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation of the cerebellar vermis (obsolete MONDO:0020130)","termid":"MONDO:0020130"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome","secondary_identifiers":["OMIMPS:213300","icd11.foundation:1414756318","NORD:1312","SCTID:716997004","DOID:0050777","GARD:6802","MEDGEN:98464","NCIT:C74996","UMLS:C0431399"],"synonyms":[{"name":"CPD IV","type":"exact"},{"name":"JBTS","type":"exact"},{"name":"Joubert syndrome","type":"exact"},{"name":"Joubert syndrome type A","type":"exact"},{"name":"Joubert-Boltshauser syndrome","type":"exact"},{"name":"cerebellar vermis agenesis","type":"related"},{"name":"cerebelloparenchymal disorder IV","type":"exact"},{"name":"classic Joubert syndrome","type":"exact"},{"name":"pure Joubert syndrome","type":"exact"}],"termid":"MONDO:0018772","xrefs":{"Monarch":{"xref_id":"0018772"}}}


id: MONDO:0012363
data:
  {"annotated_genes":["SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88519],"is_not":false,"summary":null,"term":"MONDO:0012363"}]},"cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 1p21.3-p13.3.","definition_xrefs":["PMID:16189710","DOID:0110355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 32","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322781","GARD:10395","UMLS:C1835927","MESH:C563689","OMIM:609913","ICD10CM:H35.5"],"synonyms":[{"name":"RP32","type":"exact"},{"name":"retinitis pigmentosa 32","type":"exact"},{"name":"retinitis pigmentosa type 32","type":"exact"}],"termid":"MONDO:0012363","terms_by_termid":{"MONDO:0012363":null},"xrefs":{"Monarch":{"xref_id":"0012363"}}}


id: PR:000029999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor p53-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"DNA repair protein rhp9 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-TP53BP1","type":"exact"}],"termid":"PR:000029999"}


id: PBO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2 like","termid":"PBO:0075505"}


id: MONDO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders that affect a person's ability to learn or process specific types of information which is in contrast to his/her apparent level of intellect.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"learning disability","secondary_identifiers":["UMLS:C0751265","DOID:8927","MEDGEN:199623","MESH:D007859","SCTID:1855002","ICD9:315.2","NCIT:C89334"],"synonyms":[{"name":"Academic skill disorder","type":"exact"},{"name":"learning disorder","type":"exact"}],"termid":"MONDO:0004681","xrefs":{"Monarch":{"xref_id":"0004681"}}}


id: GO:0022026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a epidermal growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"epidermal growth factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022026"}


id: PBO:0059408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S34","termid":"PBO:0059408"}


id: SO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 2.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000846 RNApol_III_promoter_type_2_region (obsolete SO:0000846)","termid":"SO:0000846"}


id: PBO:0087122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-H2 domain core subunit of multiple ubiquitin ligase complexes; subunit of Skp1-Cullin-F-box (SCF) that tethers the Cdc34p (E2) and Cdc53p (cullin) SCF subunits, and is required for degradation of Gic2p, Far1p, Sic1p and Cln2p; subunit of the Rtt101p-Mms1p-Mms22p ubiquitin ligase that stabilizes replication forks after DNA lesions; subunit of the Cul3p-Elc1p-Ela1p ubiquitin ligase involved in Rpb1p degradation as part of transcription-coupled repair","termid":"PBO:0087122"}


id: PBO:0027299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_phenotype","termid":"PBO:0027299"}


id: PBO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetamidase (predicted)","termid":"PBO:0003026"}


id: PBO:0059041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 28","termid":"PBO:0059041"}


id: GO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 21U-RNAs, a class of single-stranded RNA molecules of about 21 nucleotides in length characterized by a uridine 5'-monophosphate and a modified 3' end resistant to periodate degradation. 21U-RNAs are derived from distinct, autonomously expressed loci within the genome.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"21U-RNA metabolic process","synonyms":[{"name":"21U-RNA metabolism","type":"exact"}],"termid":"GO:0034585"}


id: MONDO:0859478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 6","secondary_identifiers":["OMIM:301101","UMLS:C5829562","MEDGEN:1840198","DOID:0070597"],"termid":"MONDO:0859478","xrefs":{"Monarch":{"xref_id":"0859478"}}}


id: MONDO:1012531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digital dermatitis, non-human animal","termid":"MONDO:1011774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital dermatitis, cattle","secondary_identifiers":["OMIA:002224-9913"],"termid":"MONDO:1012531","xrefs":{"Monarch":{"xref_id":"1012531"}}}


id: MONDO:0035592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital infiltrating lipomatosis of the face","secondary_identifiers":["Orphanet:583097","UMLS:C5680341","MEDGEN:1814459","ICD10CM:Q87.3","GARD:22333","icd11.foundation:1669603167"],"synonyms":[{"name":"CIL-F","type":"exact"},{"name":"facial infused lipomatosis","type":"exact"},{"name":"fibroadipose infiltrating lipomatosis","type":"exact"}],"termid":"MONDO:0035592","xrefs":{"Monarch":{"xref_id":"0035592"}}}


id: PR:O43049
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase T (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.01c","secondary_identifiers":["UniProtKB:O43049"],"synonyms":[{"name":"PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPP5C","type":"exact"}],"termid":"PR:O43049"}


id: GO:1905338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GOC:TermGenie","PMID:26687354","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin unloading (obsolete GO:1905338)","synonyms":[{"name":"down regulation of cohesin unloading","type":"exact"},{"name":"down-regulation of cohesin unloading","type":"exact"},{"name":"downregulation of cohesin unloading","type":"exact"},{"name":"inhibition of cohesin unloading","type":"narrow"}],"termid":"GO:1905338"}


id: GO:1990982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The immune response against a previously encountered antigen being quicker and quantitatively better compared with the primary response.","definition_xrefs":["PMID:26831526"],"gene_count":0,"genotype_count":0,"name":"obsolete Immune memory response (obsolete GO:1990982)","termid":"GO:1990982"}


id: GO:0015885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 5-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate, into, out of, within, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"5-formyltetrahydrofolate transport","termid":"GO:0015885"}


id: GO:1904281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GOC:TermGenie","PMID:24726328","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase V","synonyms":[{"name":"activation of transcription from RNA pol V promoter","type":"narrow"},{"name":"activation of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"upregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904281"}


id: PBO:0045037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispatched RND transporter family member 2","termid":"PBO:0045037"}


id: GO:0008790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose = D-ribulose.","definition_xrefs":["EC:5.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"arabinose isomerase activity","secondary_identifiers":["MetaCyc:DARABISOM-RXN","RHEA:13849"],"synonyms":[{"name":"D-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"D-arabinose isomerase activity","type":"narrow"},{"name":"D-arabinose ketol-isomerase activity","type":"related"},{"name":"D-arabinose(L-fucose) isomerase activity","type":"related"}],"termid":"GO:0008790"}


id: GO:0015993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of molecular hydrogen (H2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete molecular hydrogen transport (obsolete GO:0015993)","termid":"GO:0015993"}


id: PBO:0049779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 13 pseudogene","termid":"PBO:0049779"}


id: GO:0021801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex radial glia-guided migration","synonyms":[{"name":"cerebral cortex radial glia guided migration","type":"exact"},{"name":"cerebral cortex radial glia-dependent cell migration","type":"exact"},{"name":"glial-guided locomotion","type":"related"}],"termid":"GO:0021801"}


id: PBO:0082815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0082815"}


id: GO:1902300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galactaric acid anion (galactarate) is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"galactarate transmembrane transport","secondary_identifiers":["GO:0042871"],"synonyms":[{"name":"D-galactarate transport","type":"related"},{"name":"galactarate transport","type":"related"},{"name":"galactaric acid anion transport","type":"exact"}],"termid":"GO:1902300"}


id: GO:0042156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Initiates or upregulates transcription in the presence of zinc.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc-mediated transcriptional activator activity (obsolete GO:0042156)","synonyms":[{"name":"zinc-mediated transcriptional activator activity","type":"exact"}],"termid":"GO:0042156"}


id: PBO:0111896
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0111896"}


id: PATO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000529 drug sensitive (obsolete PATO:0000529)","termid":"PATO:0000529"}


id: PBO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0011171"}


id: FYPO:0002033
data:
  {"alleles_by_uniquename":{"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121190],"is_not":false,"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abolished protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"protein phosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002033","terms_by_termid":{"FYPO:0002033":null}}


id: FYPO:0001856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription during iron starvation","synonyms":[{"name":"normal transcription during iron depletion","type":"exact"},{"name":"normal transcription during iron deprivation","type":"exact"},{"name":"normal transcription during iron ion starvation","type":"exact"},{"name":"normal transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"normal transcription during iron starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001856"}


id: GO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045674"],"synonyms":[{"name":"down regulation of photoreceptor cell differentiation","type":"exact"},{"name":"down regulation of photoreceptor differentiation","type":"exact"},{"name":"down-regulation of photoreceptor cell differentiation","type":"exact"},{"name":"down-regulation of photoreceptor differentiation","type":"exact"},{"name":"downregulation of photoreceptor cell differentiation","type":"exact"},{"name":"downregulation of photoreceptor differentiation","type":"exact"},{"name":"inhibition of photoreceptor cell differentiation","type":"narrow"},{"name":"inhibition of photoreceptor differentiation","type":"narrow"},{"name":"negative regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046533"}


id: PATO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000673 temperature value (obsolete PATO:0000673)","termid":"PATO:0000673"}


id: PBO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin coiled-coil domain containing","termid":"PBO:0048772"}


id: PBO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YGL056C and YBR214W","termid":"PBO:0003401"}


id: PBO:0045403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 5","termid":"PBO:0045403"}


id: PBO:0064757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase B","termid":"PBO:0064757"}


id: GO:0160252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through dextrin and maltose derivative intermediates.","definition_xrefs":["MetaCyc:GLYCOCAT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycogen catabolic process via dextrin and maltose","termid":"GO:0160252"}


id: MONDO:0015222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A respiratory or mediastinal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic respiratory or mediastinal malformation (obsolete MONDO:0015222)","secondary_identifiers":["Orphanet:108995"],"synonyms":[{"name":"syndrome associated with respiratory or mediastinal malformation","type":"exact"},{"name":"syndromic respiratory or mediastinal malformation","type":"exact"}],"termid":"MONDO:0015222","xrefs":{"Monarch":{"xref_id":"0015222"}}}


id: GO:0072340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactam catabolic process","synonyms":[{"name":"cellular lactam breakdown","type":"exact"},{"name":"cellular lactam catabolic process","type":"exact"},{"name":"cellular lactam catabolism","type":"exact"},{"name":"cellular lactam degradation","type":"exact"}],"termid":"GO:0072340"}


id: MONDO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis type 4 (obsolete MONDO:0001587)","termid":"MONDO:0001587","xrefs":{"Monarch":{"xref_id":"0001587"}}}


id: PBO:0043930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-L-ribitol pyrophosphorylase A","termid":"PBO:0043930"}


id: MONDO:1012230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"protein C deficiency, non-human animal","termid":"MONDO:1011692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein C deficiency, horse","secondary_identifiers":["OMIA:000835-9796"],"termid":"MONDO:1012230","xrefs":{"Monarch":{"xref_id":"1012230"}}}


id: PBO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt2","termid":"PBO:0001149"}


id: MONDO:0010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of chondrodysplasia punctata.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata","secondary_identifiers":["MEDGEN:538019","DOID:0060292","UMLS:C0263627"],"synonyms":[{"name":"CPXD","type":"exact"},{"name":"X-linked dominant chondrodysplasia punctata","type":"related"},{"name":"chondrodysplasia punctata, X-linked","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant","type":"related"},{"name":"chondrodystrophia calcificans congenita","type":"exact"}],"termid":"MONDO:0010556","xrefs":{"Monarch":{"xref_id":"0010556"}}}


id: GO:0043747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N2-acetyl-L-lysine + H2O = acetate + L-lysine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N2-acetyl-L-lysine deacetylase activity (obsolete GO:0043747)","synonyms":[{"name":"N-acetyl-lysine deacetylase activity","type":"exact"}],"termid":"GO:0043747"}


id: MONDO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Astroblastoma is a very rare glial neoplasm of the central nervous system, most often with an intra-axial peripheral supratentorial location in one hemisphere of the frontal or parietal lobes and usually presenting in infants and young adults with symptoms of vomiting, loss of consciousness, epileptic seizures and headaches.","definition_xrefs":["Orphanet:251679"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astroblastoma","secondary_identifiers":["NCIT:C4324","GARD:10635","ONCOTREE:ASTB","ICDO:9430/3","icd11.foundation:2011571705","MEDGEN:90811","UMLS:C0334587","DOID:7305","icd11.foundation:96344074"],"synonyms":[{"name":"AstB","type":"related"},{"name":"astroblastoma","type":"exact"},{"name":"astroblastoma (morphologic abnormality)","type":"exact"},{"name":"cerebral astroblastoma","type":"related"}],"termid":"MONDO:0016707","xrefs":{"Monarch":{"xref_id":"0016707"}}}


id: PBO:0054892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2306","termid":"PBO:0054892"}


id: MONDO:0009188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy telangiectasia syndrome is characterized by intellectual deficit, epilepsy, palpebral conjunctival telangiectasias and diminished serum IgA, particular facies and a shortened fifth finger. It has been reported in six siblings from a Mexican family. It is probably transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1951"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy-telangiectasia syndrome","secondary_identifiers":["MEDGEN:384017","OMIM:226850","MESH:C535497","GARD:2168","UMLS:C1856929"],"synonyms":[{"name":"epilepsy telangiectasia","type":"related"},{"name":"epilepsy-telangiectasia","type":"related"},{"name":"intellectual disability, epilepsy, palpebral conjunctival telangiectasias and IgA deficiency","type":"related"},{"name":"mental retardation, epilepsy, palpebral conjunctival telangiectasias and IgA deficiency","type":"related"}],"termid":"MONDO:0009188","xrefs":{"Monarch":{"xref_id":"0009188"}}}


id: PBO:0004386
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"after human IQWD1","termid":"PBO:0004386"}


id: PBO:0091068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ermes regulator Emr1","termid":"PBO:0091068"}


id: MONDO:0009140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dyssegmental dysplasia, Silverman-Handmaker type is a rare, genetic, primary bone dysplasia, and lethal form of neonatal short-limbed dwarfism, characterized by anisospondyly, severe short stature and limb shortening, metaphyseal flaring and distinct dysmorphic features (i.e. flat facial appearance, abnormal ears, short neck, narrow thorax). Additional features may include other skeletal findings (e.g. joint contractures, bowed limbs, talipes equinovarus) and urogenital and cardiovascular abnormalities.","definition_xrefs":["Orphanet:1865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of perlecan","termid":"MONDO:0016151"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Silverman-Handmaker type dyssegmental dysplasia","secondary_identifiers":["MEDGEN:347372","ICD9:759.89","MESH:C537998","OMIM:224410","SCTID:93132001","UMLS:C1857100","DOID:0090032","GARD:2026"],"synonyms":[{"name":"Anisospondylic Camptomicromelic dwarfism, Silverman-Handmaker type","type":"related"},{"name":"Anisospondylic camptomicromelic dwarfism Silverman-Handmaker type","type":"related"},{"name":"DDSH","type":"related"},{"name":"dyssegmental dwarfism Silverman-Handmaker type","type":"related"},{"name":"dyssegmental dwarfism, Silverman-Handmaker type","type":"related"},{"name":"dyssegmental dysplasia Silverman-Handmaker type","type":"related"},{"name":"dyssegmental dysplasia, Silverman-Handmaker type","type":"related"}],"termid":"MONDO:0009140","xrefs":{"Monarch":{"xref_id":"0009140"}}}


id: PBO:0085100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein; possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; relative distribution to the nucleus decreases upon DNA replication stress","termid":"PBO:0085100"}


id: GO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.","definition_xrefs":["PMID:17693253","PMID:23151511","PMID:15165191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against DNA virus","synonyms":[{"name":"DNA VIGS","type":"exact"},{"name":"DNA virus induced gene silencing","type":"exact"},{"name":"DNA virus-induced PTGS","type":"exact"},{"name":"DNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051215"}


id: GO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on the paternal X-chromosome in the XX sex by genomic imprinting.","definition_xrefs":["PMID:11743158","PMID:18425126","GOC:sdb_2009","PMID:23578369","GOC:dph","GOC:tb","PMID:16789828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"},{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"inactivation of paternal X chromosome by genomic imprinting","synonyms":[{"name":"iXCI","type":"related"},{"name":"inactivation of paternal X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060818"}


id: MONDO:0970943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 8","secondary_identifiers":["MEDGEN:1858665","DOID:0070599","OMIM:301119","UMLS:C5935568"],"termid":"MONDO:0970943","xrefs":{"Monarch":{"xref_id":"0970943"}}}


id: PBO:0074914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 84","termid":"PBO:0074914"}


id: PBO:0068742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 5, pseudogene","termid":"PBO:0068742"}


id: MONDO:1012522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"turning calves syndrome, cattle","secondary_identifiers":["OMIA:002150-9913"],"synonyms":[{"name":"syndrome des veaux tourneurs","type":"exact"}],"termid":"MONDO:1012522","xrefs":{"Monarch":{"xref_id":"1012522"}}}


id: MOD:00899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-S-diacylglycerol-L-cysteine.","definition_xrefs":["RESID:AA0069#var","RESID:AA0107#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-palmitoyl-L-cysteine","termid":"MOD:00069"},{"relation_name":"has_functional_parent","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-palmitoyl-S-diacylglycerol-L-cysteine","termid":"MOD:00899"}


id: PBO:0041160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 15","termid":"PBO:0041160"}


id: PBO:0041588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 3","termid":"PBO:0041588"}


id: PBO:0109172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKMYT1 associated lncRNA","termid":"PBO:0109172"}


id: PBO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec6","termid":"PBO:0003707"}


id: GO:0045861
data:
  {"annotated_genes":["SJAG_01528","SJAG_03048","SJAG_00475","SJAG_02244","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[79320,79843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[79103,108922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteolysis","type":"exact"},{"name":"down-regulation of proteolysis","type":"exact"},{"name":"downregulation of proteolysis","type":"exact"},{"name":"inhibition of proteolysis","type":"narrow"},{"name":"negative regulation of peptidolysis","type":"exact"}],"termid":"GO:0045861","terms_by_termid":{"GO:0032435":null,"GO:1904293":null,"GO:1905785":null}}


id: FYPO:0007158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:31584934","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 binding","synonyms":[{"name":"decreased protein-histone H3 interaction","type":"exact"},{"name":"reduced histone H3 binding","type":"exact"}],"termid":"FYPO:0007158"}


id: MONDO:0004403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A T lymphoblastic leukemia/lymphoma that occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor T-lymphoblastic lymphoma/leukemia","termid":"MONDO:0003537"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"childhood precursor T-lymphoblastic lymphoma/leukemia","secondary_identifiers":["MEDGEN:232067","NCIT:C5640","DOID:7933","UMLS:C1332997"],"synonyms":[{"name":"childhood T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"childhood precursor T-lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"paediatric precursor T-lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"pediatric precursor T-lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"precursor T-lymphoblastic lymphoma/leukemia of childhood","type":"exact"}],"termid":"MONDO:0004403","xrefs":{"Monarch":{"xref_id":"0004403"}}}


id: PBO:0027315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_stress_granule","termid":"PBO:0027315"}


id: PBO:0088339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor small subunit, U2AF-23","termid":"PBO:0088339"}


id: PBO:0011136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein Far11","termid":"PBO:0011136"}


id: PBO:0048068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 19","termid":"PBO:0048068"}


id: PBO:0080933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor","termid":"PBO:0080933"}


id: GO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["ISBN:0896039986","GOC:add","ISBN:0121245462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"negatively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK5 cascade","synonyms":[{"name":"down regulation of BMK cascade","type":"exact"},{"name":"down-regulation of BMK cascade","type":"exact"},{"name":"downregulation of BMK cascade","type":"exact"},{"name":"inhibition of BMK cascade","type":"narrow"},{"name":"negative regulation of BMK cascade","type":"exact"},{"name":"negative regulation of BMK signaling pathway","type":"exact"},{"name":"negative regulation of BMK signalling pathway","type":"exact"},{"name":"negative regulation of BMK1 cascade","type":"exact"},{"name":"negative regulation of ERK5 signaling pathway","type":"exact"},{"name":"negative regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070377"}


id: PBO:0028242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vacuolated_spheroid_vegetative_cell","termid":"PBO:0028242"}


id: PBO:0067791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 93","termid":"PBO:0067791"}


id: PBO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 1","termid":"PBO:0047576"}


id: MONDO:0017764
data:
  {"annotated_genes":["SJAG_04260","SJAG_04077","SJAG_03596"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88603,88602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011174"},{"annotations":[87265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of mineral absorption and transport","termid":"MONDO:0017761"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03596":null,"SJAG_04077":null,"SJAG_04260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of zinc metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309845","SCTID:46727001","UMLS:C0268085","GARD:21356","MEDGEN:541182","ICD9:275.8","MedDRA:10048260"],"synonyms":[{"name":"disorder of zinc metabolism and transport","type":"related"}],"termid":"MONDO:0017764","terms_by_termid":{"MONDO:0011174":null,"MONDO:0044726":null},"xrefs":{"Monarch":{"xref_id":"0017764"}}}


id: PBO:0062349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 2 pseudogene","termid":"PBO:0062349"}


id: PBO:0005258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup61","termid":"PBO:0005258"}


id: MONDO:0957874
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88169],"is_not":false,"summary":null,"term":"MONDO:0957874"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620402","UMLS:C5882672","MEDGEN:1850177","DOID:0081428"],"termid":"MONDO:0957874","terms_by_termid":{"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0957874"}}}


id: MONDO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic non-acquired premature ovarian failure (obsolete MONDO:0034443)","secondary_identifiers":["Orphanet:485382"],"termid":"MONDO:0034443","xrefs":{"Monarch":{"xref_id":"0034443"}}}


id: PBO:0058552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6131","termid":"PBO:0058552"}


id: GO:0071619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group onto a serine residue at position 2 within the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II. Typically, phosphorylation of serine 2 (Ser2) occurs subsequent to phosphorylation of serine 5 and is thus seen in the middle and 3' ends of genes. In vivo, Ser2 phosphorylation is primarily performed by CTDK-I in S. cerevisiae or CDK9 in metazoans.","definition_xrefs":["GOC:krc","PMID:17079683"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:0071619)","termid":"GO:0071619"}


id: PR:O13921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh1 gene.","definition_xrefs":["UniProtKB:O13921","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.01c","synonyms":[{"name":"Spom972h-msh1","type":"exact"}],"termid":"PR:O13921"}


id: SO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has arisen after splitting of the embryo, resulting in the variant being found in only some of the tissues or cells of the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatic_variant","synonyms":[{"name":"somatic variant","type":"exact"}],"termid":"SO:0001777"}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: PBO:0053352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 243","termid":"PBO:0053352"}


id: PBO:0077565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 271","termid":"PBO:0077565"}


id: PBO:0034513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site","termid":"PBO:0034513"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: GO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phosphocholine + dolichol = 1-acyl-sn-glycero-3-phosphocholine + acyldolichol.","definition_xrefs":["EC:2.3.1.83","RHEA:19285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine-dolichol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04227","MetaCyc:2.3.1.83-RXN"],"synonyms":[{"name":"3-sn-phosphatidylcholine:dolichol O-acyltransferase activity","type":"related"}],"termid":"GO:0047199"}


id: MONDO:1012464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, sheep","secondary_identifiers":["OMIA:001813-9940"],"termid":"MONDO:1012464","xrefs":{"Monarch":{"xref_id":"1012464"}}}


id: PBO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 38","termid":"PBO:0044284"}


id: PBO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase (predicted)","termid":"PBO:0001398"}


id: MONDO:0004266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal adenocarcinoma arising from the epithelium of the anal glands. The overlying anal mucosa does not show evidence of neoplastic changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus adenocarcinoma","termid":"MONDO:0002652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal gland adenocarcinoma","secondary_identifiers":["MEDGEN:220409","DOID:7531","ICDO:8215/3","NCIT:C5609","ONCOTREE:AGA","UMLS:C1266027"],"synonyms":[{"name":"adenocarcinoma of anal ducts","type":"exact"},{"name":"adenocarcinoma of anal gland","type":"related"},{"name":"adenocarcinoma of the anal gland","type":"exact"},{"name":"anal glands adenocarcinoma","type":"exact"}],"termid":"MONDO:0004266","xrefs":{"Monarch":{"xref_id":"0004266"}}}


id: PBO:0048551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 1","termid":"PBO:0048551"}


id: MONDO:0024338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous neoplasm","secondary_identifiers":["UMLS:C1334811","MEDGEN:235339","NCIT:C7070"],"synonyms":[{"name":"mucinous neoplasm","type":"exact"},{"name":"mucinous tumor","type":"exact"},{"name":"mucinous tumour","type":"exact"}],"termid":"MONDO:0024338","xrefs":{"Monarch":{"xref_id":"0024338"}}}


id: GO:0045048
data:
  {"annotated_genes":["SJAG_00277","SJAG_04294","SJAG_00959","SJAG_01223","SJAG_01127","SJAG_01940","SJAG_05414","SJAG_02330","SJAG_00603","SJAG_04684","SJAG_00064","SJAG_01782","SJAG_02914","SJAG_01496","SJAG_02065","SJAG_01178","SJAG_01240","SJAG_02437","SJAG_01999","SJAG_03315","SJAG_02208","SJAG_03865","SJAG_03930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69304,93562,96742,99974,100285,100517,103134,105460,106438,106747,108139,110293,110381,111330,112395,114259,115852,116410],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[74573,89789,116146,76834,117115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in incorporation of a protein into an endoplasmic reticulum (ER) membrane. It depends on specific topogenic sequences of amino acids that ensure that a protein acquires the proper orientation during its insertion into the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01496":null,"SJAG_01782":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9609523"],"synonyms":[{"name":"integral ER membrane protein localization","type":"exact"},{"name":"integral ER membrane protein positioning","type":"exact"},{"name":"localization of protein in ER membrane","type":"exact"},{"name":"positioning of protein in ER membrane","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"protein-ER insertion","type":"exact"},{"name":"protein-endoplasmic reticulum insertion","type":"exact"}],"termid":"GO:0045048","terms_by_termid":{"GO:0045048":null,"GO:0071816":null}}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0114533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone (ATP-dependent) Abo2","termid":"PBO:0114533"}


id: PBO:0077206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 6 superfamily member 1","termid":"PBO:0077206"}


id: FYPO:0000592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished transposition","synonyms":[{"name":"abolished transposition during mitotic cell cycle","type":"related"},{"name":"absent transposable element transposition","type":"exact"},{"name":"transposable element transposition abolished","type":"exact"},{"name":"transposable element transposition: absent","type":"related"},{"name":"transposition abolished","type":"exact"},{"name":"transposition abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000592"}


id: MONDO:0015411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality consisting of an opening or gap in the face, which results from incomplete fusion of one or more of the embryonic facial prominences.","definition_xrefs":["NCIT:C124510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial cleft","secondary_identifiers":["GARD:19964","Orphanet:141229","icd11.foundation:11389088","MEDGEN:146898","UMLS:C0685787","SCTID:92821006"],"synonyms":[{"name":"cleft face","type":"exact"},{"name":"craniofacial cleft","type":"exact"},{"name":"prosoposchisis","type":"related"}],"termid":"MONDO:0015411","xrefs":{"Monarch":{"xref_id":"0015411"}}}


id: PBO:0057011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 101-2","termid":"PBO:0057011"}


id: GO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of radial pattern formation, the regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of radial pattern formation","synonyms":[{"name":"regulation of radial pattern specification","type":"narrow"}],"termid":"GO:0090213"}


