# terms

id: MONDO:0009650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis II (MLII) is a slowly progressive lysosomal disorder characterized by growth retardation, skeletal abnormalities, facial dysmorphism, stiff skin, developmental delay and cardiomegaly.","definition_xrefs":["Orphanet:576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GNPTAB-mucolipidosis","termid":"MONDO:0100122"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucolipidosis type II","secondary_identifiers":["NCIT:C61270","SCTID:70199000","NANDO:1200124","MEDGEN:435914","OMIM:252500","UMLS:C2673377","NANDO:2200567","GARD:6749","NORD:1279","MESH:C538602","DOID:0080070"],"synonyms":[{"name":"GNPTA","type":"related"},{"name":"I Cell Disease","type":"exact"},{"name":"I cell disease","type":"related"},{"name":"I-cell disease","type":"exact"},{"name":"Leroy disease","type":"related"},{"name":"ML 2","type":"related"},{"name":"ML 2 Alpha/Beta","type":"related"},{"name":"ML disorder type 2","type":"related"},{"name":"N-acetylglucosamine 1-phosphotransferase deficiency","type":"exact"},{"name":"N-acetylglucosamine 1phosphotransferase deficiency","type":"related"},{"name":"inclusion cell disease","type":"related"},{"name":"mucolipidosis 2","type":"related"},{"name":"mucolipidosis 2 alpha/beta","type":"related"},{"name":"mucolipidosis II","type":"exact"},{"name":"mucolipidosis II alpha/beta","type":"related"},{"name":"mucolipidosis type II","type":"exact"},{"name":"mucolipidosis type II alpha/beta","type":"exact"}],"termid":"MONDO:0009650","xrefs":{"Monarch":{"xref_id":"0009650"}}}


id: MONDO:0002098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the facial nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial nerve disorder","secondary_identifiers":["NCIT:C27594","ICD9:351.9","MEDGEN:41946","DOID:1756","SCTID:422426003","EFO:1002051","ICD10CM:G51","ICD9:351","UMLS:C0015464","MESH:D005155"],"synonyms":[{"name":"disease of facial nerve","type":"exact"},{"name":"disease or disorder of facial nerve","type":"exact"},{"name":"disorder of facial nerve","type":"exact"},{"name":"disorder of seventh cranial nerve","type":"related"},{"name":"disorders of the VIIth cranial nerve","type":"related"},{"name":"disorders of the seventh nerve","type":"related"},{"name":"facial nerve disease","type":"exact"},{"name":"facial nerve disease or disorder","type":"exact"},{"name":"facial nerve disorder","type":"exact"},{"name":"facial neuropathy","type":"related"}],"termid":"MONDO:0002098","xrefs":{"Monarch":{"xref_id":"0002098"}}}


id: PBO:0064007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 41","termid":"PBO:0064007"}


id: PR:A6X978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.02 gene.","definition_xrefs":["UniProtKB:A6X978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.02","synonyms":[{"name":"Spom972h-SPAC9E9.02","type":"exact"}],"termid":"PR:A6X978"}


id: GO:0009755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hormone-mediated signaling pathway","synonyms":[{"name":"hormone mediated signalling","type":"exact"}],"termid":"GO:0009755"}


id: FYPO:0007326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is decreased. In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial RNA 3'-end processing","termid":"FYPO:0004956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial tRNA 3'-end processing","synonyms":[{"name":"decreased mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transfer RNA 3'-end processing","type":"exact"},{"name":"reduced mitochondrial tRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0007326"}


id: GO:1902722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16159377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of prolactin secretion","synonyms":[{"name":"activation of prolactin secretion","type":"narrow"},{"name":"up regulation of prolactin secretion","type":"exact"},{"name":"up-regulation of prolactin secretion","type":"exact"},{"name":"upregulation of prolactin secretion","type":"exact"}],"termid":"GO:1902722"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-6-methylthiohexanoate aminotransferase activity (obsolete GO:0103105)","termid":"GO:0103105"}


id: PBO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein trafficking protein Pga2 (predicted)","termid":"PBO:0003681"}


id: PBO:0091846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp2","termid":"PBO:0091846"}


id: GO:0035259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear glucocorticoid receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor binding","synonyms":[{"name":"glucocorticoid receptor binding","type":"broad"}],"termid":"GO:0035259"}


id: GO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer which catalyses the reaction of 5-amino-6-(D-ribitylamino)uracil and 4-hydroxyphenylpyruvate to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO), an intermediate of coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:14593448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase complex","synonyms":[{"name":"FO-synthase complex","type":"exact"}],"termid":"GO:0044673"}


id: GO:0039018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephrostome over time, from its formation to the mature structure. The nephrostome is the opening of the pronephros into the body cavity.","definition_xrefs":["PMID:15647339","XAO:0000062","PMID:14686690","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrostome development","termid":"GO:0039018"}


id: PBO:0041734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase kinase 2","termid":"PBO:0041734"}


id: PBO:0085526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S26, no bacterial homolog; RPS26B has a paralog, RPS26A, that arose from the whole genome duplication; human homolog can partially complement an RPS26A, RPS26B double null mutant; mutations in the human gene are associated with Diamond-Blackfan anemia","termid":"PBO:0085526"}


id: PR:P30666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF46","OMA:SCHPO04285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.02c","secondary_identifiers":["UniProtKB:P30666"],"synonyms":[{"name":"Spom972h-MCM3","type":"exact"},{"name":"minichromosome maintenance protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30666"}


id: MONDO:0010981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibia absent - polydactyly - arachnoid cyst syndrome is a very rare constellation of multiple anomalies, including absence or hypoplasia of the tibia.","definition_xrefs":["Orphanet:3328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absent tibia-polydactyly-arachnoid cyst syndrome","secondary_identifiers":["OMIM:601027","GARD:5210","SCTID:733068001","UMLS:C1832859","MEDGEN:318725","MESH:C563403"],"synonyms":[{"name":"Holmes Collins syndrome","type":"related"},{"name":"Holmes-Collins syndrome","type":"exact"},{"name":"absence/hypoplasia of tibia, polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia absent polydactyly arachnoid cyst","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, RETROCEREBELLAR arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"}],"termid":"MONDO:0010981","xrefs":{"Monarch":{"xref_id":"0010981"}}}


id: PBO:0066077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 5","termid":"PBO:0066077"}


id: GO:0032213
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032213","terms_by_termid":{"GO:0032215":null}}


id: PBO:0085521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24A has a paralog, RPS24B, that arose from the whole genome duplication","termid":"PBO:0085521"}


id: PBO:0056772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 22, Kin17 lysine","termid":"PBO:0056772"}


id: MONDO:0013866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis in which the cause of the disease is a mutation in the GRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005559","MONDO:0002561","MONDO:0002039","MONDO:0005066"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 11","secondary_identifiers":["DOID:0110732","UMLS:C3539123","MEDGEN:761331","GARD:17426","OMIM:614706","Orphanet:314629"],"synonyms":[{"name":"CLN11","type":"exact"},{"name":"CLN11 disease","type":"related"},{"name":"GRN neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Grn neuronal ceroid lipofuscinosis","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 11","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 11","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in GRN","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in Grn","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 11","type":"exact"}],"termid":"MONDO:0013866","xrefs":{"Monarch":{"xref_id":"0013866"}}}


id: MONDO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maculopapular cutaneous mastocytosis (MCM) is a form of cutaneous mastocytosis (CM) characterized by the presence of multiple hyperpigmented macules, papules or nodules associated with abnormal accumulation of mast cells in the skin.","definition_xrefs":["Orphanet:79457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mastocytosis","termid":"MONDO:0019023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"maculopapular cutaneous mastocytosis","secondary_identifiers":["GARD:16723","DOID:12309","EFO:1001229","icd11.foundation:245322245","ICDO:9740/1","MedDRA:10046752","NCIT:C3433","UMLS:C0042111","MEDGEN:22588","ICD9:708.8","SCTID:78745000"],"synonyms":[{"name":"Paucicellular mastocytosis","type":"related"},{"name":"UP/MPCM","type":"exact"},{"name":"telangiectasia macularis eruptive perstans","type":"related"},{"name":"telangiectatic cutaneous mastocytosis","type":"related"},{"name":"urticaria pigmentosa","type":"exact"},{"name":"urticaria pigmentosa/maculopapular cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0019316","xrefs":{"Monarch":{"xref_id":"0019316"}}}


id: PBO:0045852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 42","termid":"PBO:0045852"}


id: PBO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Uap56","termid":"PBO:0002139"}


id: GO:0023047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a chemical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by chemical mediator (obsolete GO:0023047)","synonyms":[{"name":"signal initiation by chemical mediator","type":"exact"}],"termid":"GO:0023047"}


id: PBO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorein homolog Vps1302 (predicted)","termid":"PBO:0018097"}


id: PBO:0046089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2","termid":"PBO:0046089"}


id: PBO:0056170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase activating death domain","termid":"PBO:0056170"}


id: MONDO:0010596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"membranoproliferative glomerulonephritis, X-linked","secondary_identifiers":["OMIM:305800","UMLS:C1844501","MESH:C564423","MEDGEN:336706"],"synonyms":[{"name":"Mesangiocapillary glomerulonephritis, X-linked","type":"related"},{"name":"membranoproliferative glomerulonephritis, X-linked","type":"exact"}],"termid":"MONDO:0010596","xrefs":{"Monarch":{"xref_id":"0010596"}}}


id: PBO:0059745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 19","termid":"PBO:0059745"}


id: PBO:0080884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N6-threonylcarbamoyltransferase domain containing","termid":"PBO:0080884"}


id: PBO:0041744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 1","termid":"PBO:0041744"}


id: PBO:0083597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; deletion confers resistance to cisplatin, hypersensitivity to 5-fluorouracil, and growth defect at high pH with high calcium; overlaps gene for SWI3 transcription factor","termid":"PBO:0083597"}


id: PBO:0052897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-8","termid":"PBO:0052897"}


id: PBO:0054435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1831","termid":"PBO:0054435"}


id: MONDO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the common fibular nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lesion of sciatic nerve","termid":"MONDO:0001543"},{"relation_name":"is_a","term_name":"mononeuritis of lower limb","termid":"MONDO:0004797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"common peroneal nerve lesion","secondary_identifiers":["MEDGEN:543054","SCTID:399107008","UMLS:C0270909","ICD9:355.3","DOID:12527"],"synonyms":[{"name":"common fibular nerve peripheral nerve lesion","type":"exact"},{"name":"peripheral nerve lesion of common fibular nerve","type":"exact"}],"termid":"MONDO:0001542","xrefs":{"Monarch":{"xref_id":"0001542"}}}


id: PBO:0055611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3050","termid":"PBO:0055611"}


id: SO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA","synonyms":[{"name":"C/D-H/ACA scaRNA","type":"exact"}],"termid":"SO:0002371"}


id: MONDO:0007677
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88333],"is_not":false,"summary":null,"term":"MONDO:0007677"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"is_obsolete":false,"name":"hyperglycinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563009","OMIM:138500","UMLS:C0543541","MEDGEN:107456","HP:0003108"],"synonyms":[{"name":"Iminoglycinuria type 2","type":"related"},{"name":"glycinuria with or without oxalate nephrolithiasis","type":"related"},{"name":"glycinuria with or without oxalate urolithiasis","type":"related"},{"name":"hyperglycinuria","type":"exact"},{"name":"hyperglycinuria (disease)","type":"exact"}],"termid":"MONDO:0007677","terms_by_termid":{"MONDO:0007677":null},"xrefs":{"Monarch":{"xref_id":"0007677"}}}


id: GO:0070026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric oxide (NO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nitric oxide binding","synonyms":[{"name":"NO binding","type":"exact"},{"name":"nitrogen monoxide binding","type":"exact"},{"name":"nitrosyl binding","type":"exact"}],"termid":"GO:0070026"}


id: PBO:0077104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 2","termid":"PBO:0077104"}


id: MONDO:0007440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar I disorder","termid":"MONDO:0001866"},{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 1","secondary_identifiers":["OMIM:125480","MESH:C565111","UMLS:C1852197","DOID:0080220","MEDGEN:377615"],"synonyms":[{"name":"MAFD1","type":"exact"},{"name":"MAJOR affective disorder 1","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 1","type":"exact"},{"name":"manic-depressive psychosis","type":"related"},{"name":"manic-depressive psychosis, autosomal","type":"related"}],"termid":"MONDO:0007440","xrefs":{"Monarch":{"xref_id":"0007440"}}}


id: FYPO:0000965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000965"}


id: MONDO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency is a rare, hereditary, hemolytic anemia due to an erythrocyte nucleotide metabolism disorder characterized by mild to moderate hemolytic anemia associated with basophilic stippling and the accumulation of high concentrations of pyrimidine nucleotides within the erythrocyte. Patients present with variable features of jaundice, splenomegaly, hepatomegaly, gallstones, and sometimes require transfusions. Rare cases of mild development delay and learning difficulties are reported.","definition_xrefs":["Orphanet:35120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0002280","MONDO:0005570","MONDO:0005066"],"is_obsolete":false,"name":"hemolytic anemia due to pyrimidine 5' nucleotidase deficiency","secondary_identifiers":["OMIM:266120","MESH:C564859","UMLS:C1849507","GARD:16635","MEDGEN:341470"],"synonyms":[{"name":"P5N deficiency","type":"exact"},{"name":"UMPH1 deficiency","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 8","type":"exact"},{"name":"anemia, hemolytic, due to UMPH1 deficiency","type":"exact"},{"name":"hemolytic anaemia due to P5N deficiency","type":"related"},{"name":"hemolytic anaemia due to UMPH1 deficiency","type":"related"},{"name":"hemolytic anemia due to P5N deficiency","type":"exact"},{"name":"hemolytic anemia due to UMPH1 deficiency","type":"exact"},{"name":"pyrimidine 5-prime nucleotidase deficiency, hemolytic anaemia due to","type":"exact"},{"name":"pyrimidine 5-prime nucleotidase deficiency, hemolytic anemia due to","type":"exact"},{"name":"uridine 5'-monophosphate hydrolase deficiency","type":"exact"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anaemia due to","type":"exact"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anemia due to","type":"exact"}],"termid":"MONDO:0009946","xrefs":{"Monarch":{"xref_id":"0009946"}}}


id: GO:0070958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-positive bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-positive bacterium","type":"narrow"}],"termid":"GO:0070958"}


id: PBO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1 (predicted)","termid":"PBO:0018083"}


id: PBO:0062809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9","termid":"PBO:0062809"}


id: RO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a neuron that is synapsed_to another neuron or a neuron that is connected indirectly to another by a chain of neurons, each synapsed_to the next.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_neural_circuit_with","termid":"RO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_in_neural_circuit_with","termid":"RO:0000302"}


id: PBO:0026660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_inositol_starvation","termid":"PBO:0026660"}


id: PR:O94649
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.01c","synonyms":[{"name":"Spom972h-atg2","type":"exact"},{"name":"meiotically up-regulated gene 36 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94649"}


id: GO:0050896
data:
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id: PBO:0038494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 5","termid":"PBO:0038494"}


id: GO:1905898
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:21803450","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"positively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"activation of ER stress response","type":"narrow"},{"name":"activation of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of response to ER stress","type":"narrow"},{"name":"activation of response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress response","type":"exact"},{"name":"positive regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of response to ER stress","type":"exact"},{"name":"up regulation of ER stress response","type":"exact"},{"name":"up regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of response to ER stress","type":"exact"},{"name":"up regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress response","type":"exact"},{"name":"up-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of response to ER stress","type":"exact"},{"name":"up-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress response","type":"exact"},{"name":"upregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of response to ER stress","type":"exact"},{"name":"upregulation of response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1905898"}


id: MONDO:0005946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic, localized granulomatous infection of mucocutaneous tissues, especially the nose, and characterized by hyperplasia and the development of polyps. It is found in humans and other animals and is caused by the mesomycetozoean organism rhinosporidium seeberi.","definition_xrefs":["MESH:D012227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic Ichthyosporea infectious disease","termid":"MONDO:0000307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinosporidiosis","secondary_identifiers":["icd11.foundation:1150206155","DOID:2409","ICD9:117.0","ICD10CM:B48.1","MEDGEN:48452","EFO:0007471","SCTID:18140003","UMLS:C0035469"],"synonyms":[{"name":"Rhinosporidioses","type":"related"},{"name":"Rhinosporidium seeberi caused disease or disorder","type":"exact"},{"name":"Rhinosporidium seeberi disease or disorder","type":"exact"},{"name":"Rhinosporidium seeberi infectious disease","type":"exact"},{"name":"infection by Rhinosporidium seeberi","type":"exact"}],"termid":"MONDO:0005946","xrefs":{"Monarch":{"xref_id":"0005946"}}}


id: PATO:0001989
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's having many curves and turns.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sinuous","synonyms":[{"name":"twisted","type":"related"}],"termid":"PATO:0001989"}


id: GO:0097085
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5.","definition_xrefs":["GOC:cna","PMID:12138184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interferon regulatory factor 3-interferon regulatory factor 5 complex","synonyms":[{"name":"IRF3:IRF5 complex","type":"exact"}],"termid":"GO:0097085"}


id: PBO:0116281
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic spindle midzone-localized microtubule bundling protein; microtubule-associated protein (MAP) family member; required for anaphase spindle elongation and stabilization; selectively increases the lifetime of antiparallel microtubule overlaps; undergoes cell cycle-regulated degradation by anaphase promoting complex; potential Cdc28p substrate; relative distribution to microtubules decreases upon DNA replication stress","termid":"PBO:0116281"}


id: GO:0000172
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  {"annotated_genes":["SJAG_04582","SJAG_01551","SJAG_02553","SJAG_01369","SJAG_03425","SJAG_02547","SJAG_06613","SJAG_03952","SJAG_03234","SJAG_01623","SJAG_00955","SJAG_03796","SJAG_04916"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60958,64508,72978,73507,75360,77830,81223,92973,98711,107620,107621,117325,117413],"is_not":false,"summary":null,"term":"GO:0000172"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA molecule of the snoRNA family, and cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication.","definition_xrefs":["PMID:10690410","GOC:sgd_curators","PMID:14729943","PMID:7510714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ribonuclease MRP complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNase MRP complex","type":"exact"},{"name":"ribonuclease mitochondrial RNA processing complex","type":"exact"}],"termid":"GO:0000172","terms_by_termid":{"GO:0000172":null}}


id: GO:1902757
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["GO_REF:0000068","GOC:dph","PMID:23201473","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolism","type":"exact"}],"termid":"GO:1902757"}


id: PBO:0046840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 13","termid":"PBO:0046840"}


id: GO:1905200
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gibberellic acid across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:27139299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gibberellic acid transmembrane transport","termid":"GO:1905200"}


id: GO:0072134
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephrogenic mesenchymal tissue are generated and organized. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"nephrogenic mesenchyme development","termid":"GO:0072076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme morphogenesis","termid":"GO:0072134"}


id: PBO:0049670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 2","termid":"PBO:0049670"}


id: GO:0080049
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + 2 ferricytochrome c = L-ascorbate + 2 ferrocytochrome c.","definition_xrefs":["RHEA:47248","PMID:18190525","PMID:30112455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor","termid":"GO:0016632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-gulono-1,4-lactone dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1439"],"termid":"GO:0080049"}


id: GO:1990405
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein antigen.","definition_xrefs":["PMID:9360996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen binding","termid":"GO:0003823"},{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein antigen binding","termid":"GO:1990405"}


id: MONDO:0020260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myasthenic syndrome with eye involvement (obsolete MONDO:0020260)","secondary_identifiers":["Orphanet:98690"],"termid":"MONDO:0020260","xrefs":{"Monarch":{"xref_id":"0020260"}}}


id: PBO:0042582
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: PBO:0062005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 5 pseudogene","termid":"PBO:0062005"}


id: PBO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 3","termid":"PBO:0044552"}


id: PBO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial complex V deficiency, nuclear 2","termid":"PBO:0016969"}


id: PBO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 1","termid":"PBO:0061948"}


id: GO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NADP+ + tetrahydrocurcumin = curcumin + 2 H+ + 2 NADPH.","definition_xrefs":["RHEA:34815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"curcumin reductase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN0-6676"],"synonyms":[{"name":"NADPH-dependent curcumin reductase activity","type":"exact"}],"termid":"GO:0052849"}


id: FYPO:0006703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular UDP level","synonyms":[{"name":"decreased cellular UDP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular UDP level during vegetative growth","type":"exact"},{"name":"reduced cellular UDP level","type":"exact"}],"termid":"FYPO:0006703"}


id: GO:0050548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-feruloyl-CoA + H2O = 4-hydroxy-3-methoxyphenyl-beta-hydroxypropionyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-feruloyl-CoA hydratase activity (obsolete GO:0050548)","synonyms":[{"name":"4-hydroxy-3-methoxyphenyl-beta-hydroxypropanoyl-CoA hydro-lyase (trans-feruloyl-CoA-forming)","type":"related"},{"name":"trans-feruloyl-CoA hydro-lyase activity","type":"related"}],"termid":"GO:0050548"}


id: MONDO:0011425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 2q14-q22.","definition_xrefs":["DOID:0110429","PMID:10486326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1H","secondary_identifiers":["UMLS:C1858591","MEDGEN:348980","MESH:C536277","GARD:15365","OMIM:604288"],"synonyms":[{"name":"CMD1H","type":"exact"},{"name":"cardiomyopathy, dilated, 1H","type":"related"},{"name":"cardiomyopathy, dilated, with conduction defect","type":"related"},{"name":"dilated cardiomyopathy type 1H","type":"exact"},{"name":"dilated cardiomyopathy with conduction defect","type":"exact"}],"termid":"MONDO:0011425","xrefs":{"Monarch":{"xref_id":"0011425"}}}


id: MONDO:1012573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyknodysostosis, non-human animal","termid":"MONDO:1011973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyknodysostosis, domestic cat","secondary_identifiers":["OMIA:002607-9685"],"termid":"MONDO:1012573","xrefs":{"Monarch":{"xref_id":"1012573"}}}


id: GO:1901437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toluene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of toluene metabolic process","synonyms":[{"name":"regulation of methylbenzene metabolic process","type":"exact"},{"name":"regulation of methylbenzene metabolism","type":"exact"},{"name":"regulation of toluene metabolism","type":"exact"}],"termid":"GO:1901437"}


id: PR:O74113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC45-related protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10507:SF0","OMA:SCHPO01953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 45 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.02","secondary_identifiers":["UniProtKB:O74113"],"synonyms":[{"name":"Spom972h-CDC45","type":"exact"},{"name":"suppressor of nda4 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74113"}


id: GO:0010819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell chemotaxis","termid":"GO:0010819"}


id: PBO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filaggrin 2","termid":"PBO:0047673"}


id: MONDO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm characterized by a papillary growth pattern and a proliferation of neoplastic squamous cells without morphologic evidence of malignancy. Most frequently it arises in the oral cavity, nasopharynx, larynx, esophagus, vagina, and vulva.","definition_xrefs":["NCIT:C3712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous papilloma","secondary_identifiers":["UMLS:C0205874","ICDO:8052/0","DOID:139","EFO:1001970","MEDGEN:61470"],"synonyms":[{"name":"epidermoid cell papilloma","type":"exact"},{"name":"epidermoid papilloma","type":"exact"},{"name":"keratotic papilloma","type":"exact"},{"name":"papilloma, squamous cell, benign","type":"exact"},{"name":"squamous cell papilloma","type":"exact"},{"name":"squamous cell papilloma (morphologic abnormality)","type":"exact"},{"name":"squamous papilloma","type":"exact"}],"termid":"MONDO:0001825","xrefs":{"Monarch":{"xref_id":"0001825"}}}


id: PR:Q9UUB6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase isozyme L5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02737","PANTHER:PTHR10589:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Uch2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.06","secondary_identifiers":["UniProtKB:Q9UUB6"],"synonyms":[{"name":"SPBC409.06","type":"related"},{"name":"Spom972h-UCHL5","type":"exact"}],"termid":"PR:Q9UUB6"}


id: GO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stipule over time, from its formation to the mature structure. A stipule is one of (usually) a pair of appendages at the bases of leaves in many broad-leaved angiosperms.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stipule development","termid":"GO:0010865"}


id: PBO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu3","termid":"PBO:0004984"}


id: MONDO:0004654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyomyositis (obsolete MONDO:0004654)","termid":"MONDO:0004654","xrefs":{"Monarch":{"xref_id":"0004654"}}}


id: GO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of plasma membrane that has been modified through addition of distinct intracellular and extracellular components, including ceramide, found in cornifying epithelial cells (corneocytes).","definition_xrefs":["PMID:15803139","PMID:11112355","PMID:11590230","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cornified envelope","termid":"GO:0001533"}


id: PBO:0081887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 837","termid":"PBO:0081887"}


id: PBO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor Sar1","termid":"PBO:0004651"}


id: FYPO:0004737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of filamentous actin (F-actin) in the actomyosin contractile ring is lower than normal during early mitosis (before anaphase).","definition_xrefs":["PomBase:mah","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased F-actin level in actomyosin contractile ring during early mitosis","synonyms":[{"name":"decreased F-actin level in actomyosin contractile ring during early mitosis during mitotic cell cycle","type":"related"},{"name":"decreased F-actin level in actomyosin contractile ring during early mitosis during vegetative growth","type":"exact"},{"name":"decreased F-actin level in mitotic contractile ring during early mitosis","type":"exact"},{"name":"decreased abundance of F-actin in the actomyosin contractile ring in early mitosis","type":"exact"},{"name":"decreased actomyosin contractile ring F-actin level during early mitosis","type":"exact"},{"name":"decreased filamentous actin level in actomyosin contractile ring during early mitosis","type":"exact"}],"termid":"FYPO:0004737"}


id: MONDO:0011615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"East Texas bleeding disorder","secondary_identifiers":["OMIM:605913","MEDGEN:342980","Orphanet:391320","UMLS:C1853831","MESH:C565275","GARD:17613"],"synonyms":[{"name":"Bdet","type":"related"},{"name":"bleeding disorder, EAST Texas type","type":"related"}],"termid":"MONDO:0011615","xrefs":{"Monarch":{"xref_id":"0011615"}}}


id: GO:0050901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels. Carbohydrates on circulating leukocytes bind selectins on the vessel wall causing the leukocytes to slow down and roll along the inner surface of the vessel wall. During this rolling motion, transitory bonds are formed and broken between selectins and their ligands. Typically the first step in cellular extravasation (the movement of leukocytes out of the circulatory system, towards the site of tissue damage or infection).","definition_xrefs":["PMID:7507411","PMID:8600538","Wikipedia:Leukocyte_extravasation","GOC:bf","ISBN:0781735149","PMID:14680625","PMID:14708592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte tethering or rolling","termid":"GO:0050901"}


id: FYPO:0002234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular sterol ester level","synonyms":[{"name":"decreased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"decreased level of sterol ester in cell","type":"exact"},{"name":"decreased sterol ester accumulation","type":"related"},{"name":"reduced cellular sterol ester level","type":"exact"},{"name":"reduced level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002234"}


id: GO:0099590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"neurotransmitter receptor internalization","termid":"GO:0099590"}


id: FYPO:0003299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitin-dependent protein degradation via the N-end rule pathway is normal (i.e. indistinguishable from wild type). In the N-end rule pathway, destabilizing N-terminal residues (N-degrons) in substrates are recognized by E3 ligases (N-recognins), whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation.","definition_xrefs":["PomBase:mah","GO:0071596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"normal protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"normal ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"normal ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"normal ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"normal ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003299"}


id: PBO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha","termid":"PBO:0047750"}


id: SO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that has been generated to act as a vector for foreign sequence.","direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_vector","secondary_identifiers":["http://en.wikipedia.org/wiki/Plasmid_vector#Vectors"],"synonyms":[{"name":"plasmid vector","type":"exact"}],"termid":"SO:0000755"}


id: FYPO:0007173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mitotic checkpoint complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:28366744","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex binding","synonyms":[{"name":"decreased MCC binding","type":"exact"},{"name":"reduced mitotic checkpoint complex binding","type":"exact"}],"termid":"FYPO:0007173"}


id: PBO:0018169
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin sensitive gamma subunit","termid":"PBO:0018169"}


id: GO:0071434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of angiotensin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to angiotensin","synonyms":[{"name":"angiotensin mediated chemotaxis","type":"broad"},{"name":"angiotensin-mediated cell chemotaxis","type":"exact"}],"termid":"GO:0071434"}


id: FYPO:0002216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and are curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved vegetative cell population (obsolete FYPO:0002216)","synonyms":[{"name":"population of curved viable cells","type":"exact"}],"termid":"FYPO:0002216"}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: GO:0047286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide diphthamide + NAD+ = peptide N-(ADP-D-ribosyl)diphthamide + niacinamide.","definition_xrefs":["EC:2.4.2.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD+-diphthamide ADP-ribosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11372","RHEA:11820","Reactome:R-HSA-5336421"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+:peptide-diphthamide N-(ADP-D-ribosyl)transferase activity","type":"related"},{"name":"NAD-diphthamide ADP-ribosyltransferase activity","type":"exact"},{"name":"mono(ADP-ribosyl)transferase activity","type":"broad"}],"termid":"GO:0047286"}


id: PBO:0044697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX3 interacting lncRNA 1","termid":"PBO:0044697"}


id: GO:0036049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a succinyl group (CO-CH2-CH2-CO) from a succinylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein desuccinylation","termid":"GO:0036048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine desuccinylation","termid":"GO:0036049"}


id: GO:0047295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate = 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + diphosphate.","definition_xrefs":["PMID:15356000","RHEA:18109","PMID:16494480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"geranylgeranylglycerol-phosphate geranylgeranyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04520","MetaCyc:2.5.1.42-RXN","EC:2.5.1.42"],"synonyms":[{"name":"(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"DGGGP synthase activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-3-O-(geranylgeranyl)glycerol 1-phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyloxyglycerol phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyltransferase II","type":"related"}],"termid":"GO:0047295"}


id: PBO:0004098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore protein Ely5","termid":"PBO:0004098"}


id: MONDO:0008318
data:
  {"annotated_genes":["SJAG_04206","SJAG_04394","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88307,88308,88309],"is_not":false,"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"Proteus syndrome (PS) is a very rare and complex hamartomatous overgrowth disorder characterized by progressive overgrowth of the skeleton, skin, adipose, and central nervous systems.","definition_xrefs":["Orphanet:744"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"Proteus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:176920","GARD:7475","NORD:1622","UMLS:C0085261","SCTID:23150001","NCIT:C85032","MEDGEN:39008","DOID:13482","MESH:D016715","ICD9:759.89","icd11.foundation:760267333"],"synonyms":[{"name":"Elattoproteus syndrome","type":"related"},{"name":"Proteus syndrome","type":"exact"},{"name":"Wiedemann's syndrome","type":"exact"},{"name":"gigantism, partial, of hands and feet, nevi, hemihypertrophy, and macrocephaly","type":"related"},{"name":"hemihypertrophy and macrocephaly","type":"related"},{"name":"partial gigantism of hands and feet, nevi, hemihypertrophy, macrocephaly","type":"related"},{"name":"partial gigantism-nevi-hemihypertrophy-macrocephaly syndrome","type":"exact"},{"name":"proteus syndrome, somatic","type":"exact"}],"termid":"MONDO:0008318","terms_by_termid":{"MONDO:0008318":null},"xrefs":{"Monarch":{"xref_id":"0008318"}}}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: PBO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6","termid":"PBO:0075233"}


id: PBO:0075479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 7","termid":"PBO:0075479"}


id: PBO:0083171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps HYP2/YEL034W, a verified gene that encodes eiF-5A","termid":"PBO:0083171"}


id: PBO:0059615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 27","termid":"PBO:0059615"}


id: MONDO:0016118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","secondary_identifiers":["Orphanet:206959","ICD10CM:E74.0","NANDO:1200823"],"synonyms":[{"name":"glycogen storage myopathy","type":"exact"}],"termid":"MONDO:0016118","xrefs":{"Monarch":{"xref_id":"0016118"}}}


id: PBO:0075860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 8, pseudogene","termid":"PBO:0075860"}


id: MONDO:1011827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mast cell tumor, non-human animal","secondary_identifiers":["OMIA:002578"],"termid":"MONDO:1011827","xrefs":{"Monarch":{"xref_id":"1011827"}}}


id: PBO:0080298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 62 pseudogene","termid":"PBO:0080298"}


id: GO:0019147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-1-aminopropan-2-ol + NAD+ = aminoacetone + H+ + NADH.","definition_xrefs":["EC:1.1.1.75","RHEA:16517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-aminopropanol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03759","MetaCyc:AMINOPROPDEHYDROG-RXN"],"synonyms":[{"name":"(R)-1-aminopropan-2-ol:NAD+ oxidoreductase activity","type":"related"},{"name":"1-aminopropan-2-ol-NAD+ dehydrogenase activity","type":"related"},{"name":"1-aminopropan-2-ol-dehydrogenase activity","type":"related"},{"name":"DL-1-aminopropan-2-ol: NAD+ dehydrogenase activity","type":"related"},{"name":"L(+)-1-aminopropan-2-ol-NAD/NADP oxidoreductase activity","type":"related"},{"name":"L(+)-1-aminopropan-2-ol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-aminopropanol dehydrogenase activity","type":"exact"}],"termid":"GO:0019147"}


id: PR:O60129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head protein homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.15c","synonyms":[{"name":"Spom972h-fkh2","type":"exact"}],"termid":"PR:O60129"}


id: PBO:0017607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit, WD repeat protein Swd22","termid":"PBO:0017607"}


id: MONDO:0859357
data:
  {"annotated_genes":["SJAG_01940"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87390],"is_not":false,"summary":null,"term":"MONDO:0859357"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIz","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620201","MEDGEN:1824068","UMLS:C5774295"],"termid":"MONDO:0859357","terms_by_termid":{"MONDO:0859357":null},"xrefs":{"Monarch":{"xref_id":"0859357"}}}


id: MONDO:0012474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nocturnal frontal lobe epilepsy in which the cause of the disease is a mutation in the CHRNA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 4","secondary_identifiers":["MESH:C563679","OMIM:610353","DOID:0060685","UMLS:C1835905","DOID:0081119","MEDGEN:332082","GARD:15481"],"synonyms":[{"name":"CHRNA2 autosomal dominant nocturnal frontal lobe epilepsy","type":"exact"},{"name":"ENFL4","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy caused by mutation in CHRNA2","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 4","type":"exact"},{"name":"convulsions, benign familial infantile, 6","type":"related"},{"name":"epilepsy, familial, with nocturnal wandering and Ictal fear","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, 4","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 4","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 4","type":"exact"},{"name":"seizures, benign familial infantile, 6","type":"related"}],"termid":"MONDO:0012474","xrefs":{"Monarch":{"xref_id":"0012474"}}}


id: PBO:0081238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 7","termid":"PBO:0081238"}


id: GO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL3 or MLL4 in mammals, or equivalent in other species.","definition_xrefs":["GOC:sart","PMID:21875999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"MLL3/4 complex","synonyms":[{"name":"Trr/COMPASS-like complex","type":"exact"}],"termid":"GO:0044666"}


id: PBO:0057688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1277","termid":"PBO:0057688"}


id: GO:1903681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["PMID:18394891","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"}


id: PBO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9","termid":"PBO:0061218"}


id: MONDO:0000520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor affecting the parietal lobe of the brain.","definition_xrefs":["NCIT:C131575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parietal lobe cancer","termid":"MONDO:0001952"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parietal lobe ependymal tumor","secondary_identifiers":["UMLS:C4330935","DOID:0050903","MEDGEN:1392382"],"synonyms":[{"name":"ependymal tumor of parietal lobe","type":"exact"},{"name":"ependymal tumour of parietal lobe","type":"exact"},{"name":"parietal lobe ependymal tumor","type":"exact"},{"name":"parietal lobe ependymoma","type":"related"}],"termid":"MONDO:0000520","xrefs":{"Monarch":{"xref_id":"0000520"}}}


id: MONDO:0005523
data:
  {"annotated_genes":["SJAG_01036","SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009025"},{"annotations":[89114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"Errors in metabolic processing of steroids resulting from inborn genetic mutations that are inherited or acquired in utero.","definition_xrefs":["MESH:D043202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"steroid inherited metabolic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1257809","DOID:1701","MEDGEN:219772","EFO:0005590"],"termid":"MONDO:0005523","terms_by_termid":{"MONDO:0009025":null,"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0005523"}}}


id: GO:0006955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response","termid":"GO:0006955"}


id: GO:1990890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a netrin receptor.","definition_xrefs":["PMID:9126742","PMID:8861902","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"netrin receptor binding","termid":"GO:1990890"}


id: FYPO:0004273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus is decreased.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased ascospore release from ascus","synonyms":[{"name":"reduced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004273"}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: PBO:0050719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 5","termid":"PBO:0050719"}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: MONDO:0800322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"membranous obstruction of inferior vena cava","secondary_identifiers":["MEDGEN:107472","UMLS:C0546323"],"synonyms":[{"name":"MOVC","type":"exact"}],"termid":"MONDO:0800322","xrefs":{"Monarch":{"xref_id":"0800322"}}}


id: MONDO:0858917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cauda equina neoplasm that is a slow-growing, well-differentiated neuroendocrine tumor arising from the cauda equina.","definition_xrefs":["DOID:0081245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina neoplasm","termid":"MONDO:0003164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina neuroendocrine tumor","secondary_identifiers":["NCIT:C5324","MEDGEN:272437","UMLS:C1332860"],"termid":"MONDO:0858917","xrefs":{"Monarch":{"xref_id":"0858917"}}}


id: GO:1990466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sumoylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PMID:23443663","PMID:21518767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein autosumoylation","synonyms":[{"name":"protein auto-sumoylation","type":"exact"},{"name":"protein self-sumoylation","type":"exact"}],"termid":"GO:1990466"}


id: MONDO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Blount disease (obsolete MONDO:0002020)","synonyms":[{"name":"obsolete Blount's disease","type":"exact"}],"termid":"MONDO:0002020","xrefs":{"Monarch":{"xref_id":"0002020"}}}


id: PBO:0069227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 482, pseudogene","termid":"PBO:0069227"}


id: GO:1901120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tobramycin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00971","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"tobramycin metabolic process","termid":"GO:1901119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tobramycin catabolic process","synonyms":[{"name":"tobramycin breakdown","type":"exact"},{"name":"tobramycin catabolism","type":"exact"},{"name":"tobramycin degradation","type":"exact"}],"termid":"GO:1901120"}


id: PBO:0067353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 451, pseudogene","termid":"PBO:0067353"}


id: MONDO:0859351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity and hypopigmentation","secondary_identifiers":["UMLS:C5774289","MEDGEN:1824062","OMIM:620195"],"termid":"MONDO:0859351","xrefs":{"Monarch":{"xref_id":"0859351"}}}


id: GO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the activin family to its receptor on the surface of a target cell, and contributing to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart","GOC:signaling","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete activin receptor signaling pathway involved in heart jogging (obsolete GO:0061372)","synonyms":[{"name":"activin receptor signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0061372"}


id: MONDO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic nodular lesion that arises from the gingiva. It is composed of epithelial cells lining connective tissue stroma.","definition_xrefs":["NCIT:C4693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epulis","termid":"MONDO:0003396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival fibroepithelial polyp","secondary_identifiers":["UMLS:C0399441","SCTID:235001002","icd11.foundation:1520492305","MEDGEN:98314"],"synonyms":[{"name":"fibroepithelial polyp of gingiva","type":"exact"},{"name":"fibroepithelial polyp of gum","type":"exact"},{"name":"fibroepithelial polyp of the gingiva","type":"exact"},{"name":"fibroepithelial polyp of the gum","type":"exact"},{"name":"gingival fibroepithelial polyp","type":"exact"},{"name":"gum fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060768","xrefs":{"Monarch":{"xref_id":"0060768"}}}


id: PR:O43030
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fes1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp70 nucleotide exchange factor fes1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.01","synonyms":[{"name":"Spom972h-fes1","type":"exact"}],"termid":"PR:O43030"}


id: SO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of alteration of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alteration_attribute","synonyms":[{"name":"alteration attribute","type":"exact"}],"termid":"SO:0001508"}


id: PR:000085734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Ser-11, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Phos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Ser-11, MOD:00046","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/Phos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Ser-11, MOD:00046","type":"exact"},{"name":"hht3/Phos(S10)","type":"exact"}],"termid":"PR:000085734"}


id: GO:0042923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuropeptides, peptides with direct synaptic effects (peptide neurotransmitters) or indirect modulatory effects on the nervous system (peptide neuromodulators).","definition_xrefs":["PMID:10414961","PMID:38337033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neuropeptide binding","termid":"GO:0042923"}


id: GO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell migration","termid":"GO:0043542"}


id: GO:0007020
data:
  {"annotated_genes":["SJAG_03835","SJAG_02737","SJAG_01215","SJAG_07018","SJAG_02761","SJAG_03540","SJAG_00856","SJAG_02609","SJAG_02886","SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72911,73341,80815],"is_not":false,"summary":null,"term":"GO:0007020"},{"annotations":[118970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[102927,119220,102022,102318,108421,118975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[102928,120713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation).","definition_xrefs":["GOC:go_curators","PMID:12517712","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150","GO:0065003","GO:0000226"],"is_obsolete":false,"name":"microtubule nucleation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microtubule_nucleation"],"termid":"GO:0007020","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: FYPO:0001731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutamate level","termid":"FYPO:0001568"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar glutamate level","synonyms":[{"name":"increased level of glutamate in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamate level","type":"exact"},{"name":"increased vacuolar glutamate level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamate level during vegetative growth","type":"exact"},{"name":"increased vacuolar glutamic acid level","type":"related"}],"termid":"FYPO:0001731"}


id: FYPO:0005376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which proteolysis is abnormal. Proteolysis is the hydrolysis of one or more peptide bonds within a protein.","definition_xrefs":["PomBase:mah","GO:0006508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal proteolysis","synonyms":[{"name":"abnormal peptidolysis","type":"exact"},{"name":"abnormal protein cleavage","type":"narrow"}],"termid":"FYPO:0005376"}


id: GO:0047806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2 + ferricytochrome c3 = 4 H+ + ferrocytochrome c3.","definition_xrefs":["MetaCyc:CYTOCHROME-C3-HYDROGENASE-RXN","EC:1.12.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","termid":"GO:0016697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cytochrome-c3 hydrogenase activity","secondary_identifiers":["RHEA:20625"],"synonyms":[{"name":"H(2):ferricytochrome c3 oxidoreductase activity","type":"related"},{"name":"H2:ferricytochrome c3 oxidoreductase activity","type":"related"},{"name":"cytochrome c3 reductase activity","type":"related"},{"name":"cytochrome hydrogenase activity","type":"broad"},{"name":"hydrogen:ferricytochrome-c3 oxidoreductase activity","type":"related"}],"termid":"GO:0047806"}


id: MONDO:0001141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"As accumulation of granulation tissue in the middle ear that results from the degeneration of blood and a chronic inflammatory response.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear cholesterol granuloma","secondary_identifiers":["ICD9:385.82","MEDGEN:56364","UMLS:C0155492","SCTID:28371001","DOID:10852"],"synonyms":[{"name":"cholesterin granuloma","type":"exact"},{"name":"cholesterin granuloma of middle ear","type":"exact"}],"termid":"MONDO:0001141","xrefs":{"Monarch":{"xref_id":"0001141"}}}


id: PBO:0014263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Serine Protease","termid":"PBO:0014263"}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: GO:0010929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"positively_regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010929"}


id: MONDO:0020196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anomaly of the secretory and excretory apparatus of the lacrimal system (obsolete MONDO:0020196)","secondary_identifiers":["Orphanet:98608"],"termid":"MONDO:0020196","xrefs":{"Monarch":{"xref_id":"0020196"}}}


id: FYPO:0003455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of the breakdown of arginine into other compounds, including proline, is decreased.","definition_xrefs":["PomBase:mah","GO:0019493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased arginine catabolic process to proline","synonyms":[{"name":"decreased arginine catabolic process to proline during mitotic cell cycle","type":"related"},{"name":"decreased arginine catabolic process to proline during vegetative growth","type":"exact"},{"name":"decreased arginine catabolism to proline","type":"exact"},{"name":"reduced arginine catabolic process to proline","type":"exact"}],"termid":"FYPO:0003455"}


id: MONDO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the small intestine. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C4638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0002995"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine tumor G1","termid":"MONDO:0021533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:91150","DOID:0050925","UMLS:C0349536","SCTID:276818002"],"synonyms":[{"name":"carcinoid tumor of small bowel","type":"exact"},{"name":"carcinoid tumor of small intestine","type":"exact"},{"name":"carcinoid tumor of the small bowel","type":"exact"},{"name":"carcinoid tumor of the small intestine","type":"exact"},{"name":"carcinoid tumour of small bowel","type":"exact"},{"name":"carcinoid tumour of small intestine","type":"exact"},{"name":"carcinoid tumour of the small bowel","type":"exact"},{"name":"carcinoid tumour of the small intestine","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of small intestine","type":"exact"},{"name":"small bowel carcinoid tumor","type":"exact"},{"name":"small bowel carcinoid tumour","type":"exact"},{"name":"small intestinal NET G1","type":"exact"},{"name":"small intestinal carcinoid tumor","type":"exact"},{"name":"small intestinal carcinoid tumour","type":"exact"},{"name":"small intestinal neuroendocrine tumor G1","type":"exact"},{"name":"small intestine NET G1","type":"exact"},{"name":"small intestine carcinoid neuroendocrine tumor","type":"related"},{"name":"small intestine carcinoid neuroendocrine tumour","type":"related"},{"name":"small intestine carcinoid tumor","type":"exact"},{"name":"small intestine carcinoid tumor (disease)","type":"exact"},{"name":"small intestine carcinoid tumour","type":"exact"},{"name":"small intestine carcinoid tumour (disease)","type":"exact"},{"name":"small intestine neuroendocrine neoplasm G1","type":"exact"},{"name":"small intestine neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0000540","xrefs":{"Monarch":{"xref_id":"0000540"}}}


id: GO:1902457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"negatively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal opening","synonyms":[{"name":"down regulation of stomatal opening","type":"exact"},{"name":"down-regulation of stomatal opening","type":"exact"},{"name":"downregulation of stomatal opening","type":"exact"},{"name":"inhibition of stomatal opening","type":"narrow"}],"termid":"GO:1902457"}


id: GO:0044805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A type of nucleophagy, distinct from piecemeal microautophagy of the nucleus (PNM) where the nuclear material is delivered to the vacuole/lysosome for breakdown and recycling later than observed for PNM.","definition_xrefs":["PMID:22768199","GOC:jl","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete late nucleophagy (obsolete GO:0044805)","termid":"GO:0044805"}


id: PBO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA decapping Edc3 (predicted)","termid":"PBO:0003899"}


id: GO:0046296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate metabolic process","termid":"GO:0009441"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolate catabolic process","synonyms":[{"name":"glycolate breakdown","type":"exact"},{"name":"glycolate catabolism","type":"exact"},{"name":"glycolate degradation","type":"exact"}],"termid":"GO:0046296"}


id: PBO:0044205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 3","termid":"PBO:0044205"}


id: GO:0102145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = (3R,6E)-nerolidol + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:27534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3R)-(E)-nerolidol synthase activity","secondary_identifiers":["EC:4.2.3.49","MetaCyc:RXN-11575"],"termid":"GO:0102145"}


id: FYECO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any series of two or more different sets of conditions used in a single experiment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping sequential growth conditions","termid":"FYECO:0000094"}


id: PBO:0116644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2","termid":"PBO:0116644"}


id: GO:0004676
data:
  {"annotated_genes":["SJAG_02468"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119489],"is_not":false,"summary":null,"term":"GO:0004676"}]},"cv_name":"molecular_function","definition":"Phosphatidylinositol-3-phosphate-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"3-phosphoinositide-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-437195"],"synonyms":[{"name":"PDK activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate protein kinase activity","type":"exact"}],"termid":"GO:0004676","terms_by_termid":{"GO:0004676":null}}


id: PBO:0109457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid N-acetyltransferase","termid":"PBO:0109457"}


id: PBO:0041417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 alpha chain","termid":"PBO:0041417"}


id: GO:0099510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of cytosolic calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding","termid":"GO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","synonyms":[{"name":"regulation of cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099510"}


id: MONDO:0016535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder of ectoderm development characterized by malformation of ectodermal structures such as skin, hair, teeth and sweat glands. It comprises three clinically almost indistinguishable subtypes with impaired sweating as the key symptom: Christ-Siemens-Touraine (CST) syndrome (X-linked), autosomal recessive (AR), and autosomal dominant (AD) HED, as well as a fourth rare subtype with immunodeficiency as the key symptom (HED with immunodeficiency).","definition_xrefs":["Orphanet:238468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypohidrotic ectodermal dysplasia","secondary_identifiers":["NORD:1272","SCTID:7731005","DOID:14793","GARD:76","NCIT:C84562","HP:0007607","MEDGEN:1853123","UMLS:C5848103","icd11.foundation:673167184","NANDO:2201005"],"synonyms":[{"name":"CST syndrome","type":"related"},{"name":"EDA","type":"related"},{"name":"HED","type":"exact"},{"name":"anhidrotic ectodermal dysplasia","type":"exact"},{"name":"anhidrotic ectodermal dysplasia 1","type":"exact"},{"name":"anhidrotic ectodermal dysplasia 3","type":"exact"},{"name":"ectodermal dysplasia 1, Anhydrotic","type":"exact"},{"name":"ectodermal dysplasia anhidrotic","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic","type":"related"},{"name":"hypohidrotic X-linked ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0016535","xrefs":{"Monarch":{"xref_id":"0016535"}}}


id: PBO:0056117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 2","termid":"PBO:0056117"}


id: PBO:0084083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide dissociation stimulator for Sec4p; functions in the post-Golgi secretory pathway; binds zinc, found both on membranes and in the cytosol","termid":"PBO:0084083"}


id: PBO:0081414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 267","termid":"PBO:0081414"}


id: PBO:0034664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cohesin_loading","termid":"PBO:0034664"}


id: GO:0008194
data:
  {"annotated_genes":["SJAG_00442","SJAG_06383","SJAG_00129","SJAG_04881","SJAG_02913","SJAG_05285","SJAG_02222","SJAG_03066","SJAG_00876","SJAG_04184","SJAG_01427","SJAG_04868","SJAG_01288","SJAG_04821","SJAG_00394","SJAG_01028","SJAG_02916","SJAG_00183","SJAG_03057","SJAG_03311","SJAG_04236","SJAG_04571","SJAG_02804","SJAG_01531","SJAG_03587","SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77617,81803,76552,115174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[103000,95239,80635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[80561,72389,75120,73178,75292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[117844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[76214,76004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[68165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[107732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[64339,100606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[113602,79248,119267,94890,94980,110567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[81332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.","definition_xrefs":["PMID:11846783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00183":null,"SJAG_00394":null,"SJAG_00442":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_02222":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_03587":null,"SJAG_04119":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_05285":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-glycosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162730"],"termid":"GO:0008194","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004100":null,"GO:0004577":null,"GO:0004581":null,"GO:0017176":null,"GO:0047220":null,"GO:0047657":null,"GO:0140752":null}}


id: GO:0098880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}


id: PBO:0081085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 15","termid":"PBO:0081085"}


id: PBO:0055215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2641","termid":"PBO:0055215"}


id: PBO:0085494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protease that specifically cleaves Smt3p protein conjugates; required for cell cycle progression; associates with nucleoporins and may interact with septin rings during telophase; contributes to regulation of telomeric silencing; sequestered to the nucleolus under stress conditions","termid":"PBO:0085494"}


id: PATO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's decomposition into component parts.","definition_xrefs":["Medical-dictionary:Medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed","termid":"PATO:0001432"}


id: MONDO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the cardia of stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cardia cancer","secondary_identifiers":["ICD9:151.0","DOID:10548","MEDGEN:509280","UMLS:C0153417","SCTID:187732006"],"synonyms":[{"name":"Ca cardia - stomach","type":"exact"},{"name":"cancer of cardia of stomach","type":"exact"},{"name":"cardia of stomach cancer","type":"exact"},{"name":"malignant cardia of stomach neoplasm","type":"exact"},{"name":"malignant neoplasm of cardia of stomach","type":"exact"}],"termid":"MONDO:0001063","xrefs":{"Monarch":{"xref_id":"0001063"}}}


id: PR:P41878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10410:SF5","OMA:SCHPO01258","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.13","secondary_identifiers":["UniProtKB:P41878"],"synonyms":[{"name":"Spom972h-PSMD14","type":"exact"},{"name":"protein pad1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41878"}


id: GO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an atrichoblast, a root epidermal cell that will not give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast differentiation","termid":"GO:0010055"}


id: MONDO:0022034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the Lentivirus genus. They are multi-organ diseases characterized by long incubation periods and persistent infection.","definition_xrefs":["MESH:D016180"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine carcinosarcoma","termid":"MONDO:0006485"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lentivirus infection","secondary_identifiers":["UMLS:C0079680","MEDGEN:38233","EFO:1001357"],"synonyms":[{"name":"Disease caused by Lentivirus","type":"related"},{"name":"Disease due to Lentivirus","type":"related"},{"name":"Infection, Lentivirus","type":"related"},{"name":"Infections, Lentivirus","type":"related"},{"name":"Lentivirus Infection","type":"related"},{"name":"Lentivirus Infections","type":"related"}],"termid":"MONDO:0022034","xrefs":{"Monarch":{"xref_id":"0022034"}}}


id: PBO:0003871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.4","termid":"PBO:0003871"}


id: PBO:0060476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 1","termid":"PBO:0060476"}


id: GO:1902060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23480775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"positively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"activation of ascus development","type":"narrow"},{"name":"activation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"activation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"activation of perfect stage fruiting body development","type":"narrow"},{"name":"activation of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"positive regulation of ascus development","type":"narrow"},{"name":"positive regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"positive regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"positive regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of ascus development","type":"narrow"},{"name":"up regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"up-regulation of ascus development","type":"narrow"},{"name":"up-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"upregulation of ascus development","type":"narrow"},{"name":"upregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"upregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"upregulation of perfect stage fruiting body development","type":"narrow"},{"name":"upregulation of sporocarp development involved in sexual reproduction","type":"exact"}],"termid":"GO:1902060"}


id: PBO:0004043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a (predicted)","termid":"PBO:0004043"}


id: MONDO:0005788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the liver in humans; caused by hepatitis E virus, a non-enveloped single-stranded rna virus. Similar to hepatitis A, its incubation period is 15-60 days and is enterically transmitted, usually by fecal-oral transmission.","definition_xrefs":["MESH:D016751"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis E virus infection","secondary_identifiers":["MEDGEN:88376","SCTID:7111000119109","EFO:0007303","DOID:4411","UMLS:C0085293"],"synonyms":[{"name":"Hepatitis E virus caused hepatitis","type":"exact"},{"name":"Hepatitis E virus hepatitis","type":"exact"},{"name":"hepatitis type E","type":"exact"}],"termid":"MONDO:0005788","xrefs":{"Monarch":{"xref_id":"0005788"}}}


id: PBO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase-like hydrolase","termid":"PBO:0000827"}


id: PBO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 associated regulatory protein","termid":"PBO:0039642"}


id: PBO:0076861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 11","termid":"PBO:0076861"}


id: PR:O74857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13408:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.07","secondary_identifiers":["UniProtKB:O74857"],"synonyms":[{"name":"RNA polymerase III subunit C4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC18.07","type":"related"},{"name":"Spom972h-POLR3D","type":"exact"},{"name":"rpc4","type":"related"}],"termid":"PR:O74857"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: PBO:0112955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_2d_structure_id","termid":"PBO:0112955"}


id: PBO:0064529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G pseudogene 1","termid":"PBO:0064529"}


id: MONDO:0012100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"major depressive disorder","termid":"MONDO:0002009"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major depressive disorder 2","secondary_identifiers":["UMLS:C1837529","MEDGEN:324819","MESH:C563875","OMIM:608691"],"synonyms":[{"name":"MDD2","type":"exact"},{"name":"major depressive disorder 2","type":"exact"},{"name":"major depressive disorder type 2","type":"exact"},{"name":"unipolar depression 2","type":"related"}],"termid":"MONDO:0012100","xrefs":{"Monarch":{"xref_id":"0012100"}}}


id: GO:1905883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of triglyceride transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25849533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"regulates","term_name":"triglyceride transport","termid":"GO:0034197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride transport","synonyms":[{"name":"regulation of triacylglycerol transport","type":"exact"}],"termid":"GO:1905883"}


id: PBO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 20","termid":"PBO:0071414"}


id: MONDO:0100138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial myopathy caused by defects in the MICOS subunit gene APOO (MIC26). Modelling in yeast and flies demonstrate an inability to insert MICOS complex into the inner mitohondrial membrane. Associated symptoms include, lactic acidosis, cognitive impairment and autistic features.","definition_xrefs":["PMID:32439808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"X-linked recessive mitochondrial myopathy","synonyms":[{"name":"X-linked recessive mitochondrial myopathy, lactic acidosis, cognitive impairment and autistic features","type":"exact"}],"termid":"MONDO:0100138","xrefs":{"Monarch":{"xref_id":"0100138"}}}


id: PBO:0030030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_shmoo_formation","termid":"PBO:0030030"}


id: MONDO:0032624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 19","secondary_identifiers":["OMIM:618241","UMLS:C4748791","DOID:0112085","GARD:16326","MEDGEN:1648450"],"synonyms":[{"name":"MC1DN19","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 19","type":"related"}],"termid":"MONDO:0032624","xrefs":{"Monarch":{"xref_id":"0032624"}}}


id: SO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a translocation, which is then a region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocaton_attribute","synonyms":[{"name":"translocation attribute","type":"exact"}],"termid":"SO:0001520"}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: GO:0046607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of centrosome cycle","synonyms":[{"name":"activation of centrosome cycle","type":"narrow"},{"name":"stimulation of centrosome cycle","type":"narrow"},{"name":"up regulation of centrosome cycle","type":"exact"},{"name":"up-regulation of centrosome cycle","type":"exact"},{"name":"upregulation of centrosome cycle","type":"exact"}],"termid":"GO:0046607"}


id: PBO:0086497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pimeloyl-CoA synthetase involved in biotin biosynthesis; in S. cerevisiae strains YJM627 and A364a; highly degraded pseudogenic copy of BIO1/YAR070W-A, which is a paralog of YJR154W","termid":"PBO:0086497"}


id: GO:0071838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the bone marrow.","definition_xrefs":["GOC:yaf","PMID:17063141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in bone marrow","synonyms":[{"name":"bone marrow cell proliferation","type":"exact"}],"termid":"GO:0071838"}


id: PBO:0088070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; situated in the base subcomplex of the 26S proteasome, releases free ubiquitin from branched polyubiquitin chains en bloc, rather than from the distal tip of the chain; negatively regulates degradation of ubiquitinated proteins by the proteasome; works in opposition to Hul5p polyubiquitin elongation activity; mutant has aneuploidy tolerance; human homolog UBP14 complements yeast null mutant","termid":"PBO:0088070"}


id: GO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from UDP-glucose to a hydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740","GO:0140097"],"is_obsolete":false,"name":"DNA alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.26-RXN"],"synonyms":[{"name":"T2-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T4-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T6-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:DNA alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-DNA alpha-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-deoxyribonucleate alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0033820"}


id: PBO:0030676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_size","termid":"PBO:0030676"}


id: PBO:0070710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 15","termid":"PBO:0070710"}


id: PBO:0074607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 12","termid":"PBO:0074607"}


id: PBO:0065784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine and serine rich 1","termid":"PBO:0065784"}


id: MONDO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic/myeloproliferative neoplasm characterized by the principal involvement of the neutrophil series with leukocytosis and multilineage dysplasia. The neoplastic cells do not have a Philadelphia chromosome or the BCR/ABL fusion gene. (WHO, 2001)","definition_xrefs":["NCIT:C3519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukemia","termid":"MONDO:0004643"},{"relation_name":"is_a","term_name":"myelodysplastic/myeloproliferative neoplasm","termid":"MONDO:0006311"},{"relation_name":"is_a","term_name":"myelodysplastic/myeloproliferative disease","termid":"MONDO:0020077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"atypical chronic myeloid leukemia, BCR-ABL1 negative","secondary_identifiers":["DOID:8747","MEDGEN:266233","GARD:19583","SCTID:277589003","icd11.foundation:331838766","DOID:0060597","ICDO:9876/3","UMLS:C1292772","MedDRA:10054651","Orphanet:98824"],"synonyms":[{"name":"aCML","type":"exact"},{"name":"atypical CML","type":"exact"},{"name":"atypical chronic myeloid leukaemia","type":"exact"},{"name":"atypical chronic myeloid leukaemia BCR-ABL1 negative","type":"exact"},{"name":"atypical chronic myeloid leukemia","type":"exact"},{"name":"atypical chronic myeloid leukemia BCR-ABL1 negative","type":"exact"},{"name":"atypical chronic myeloid leukemia, BCR-ABL1 Negative","type":"exact"},{"name":"subacute granulocytic leukaemia","type":"exact"},{"name":"subacute granulocytic leukemia","type":"exact"},{"name":"subacute myelogenous leukaemia","type":"exact"},{"name":"subacute myelogenous leukemia","type":"exact"},{"name":"subacute myeloid leukaemia","type":"exact"},{"name":"subacute myeloid leukemia","type":"exact"}],"termid":"MONDO:0004653","xrefs":{"Monarch":{"xref_id":"0004653"}}}


id: GO:0045160
data:
  {"annotated_genes":["SJAG_04901","SJAG_04001","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97281,98789,105199],"is_not":false,"summary":null,"term":"GO:0045160"}]},"cv_name":"cellular_component","definition":"A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement.","definition_xrefs":["GOC:mah","PMID:9438839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin I complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045160","terms_by_termid":{"GO:0045160":null}}


id: FYPO:0004634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during one or both meiotic nuclear divisions is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during meiosis","synonyms":[{"name":"normal cellular protein level during meiosis","type":"exact"},{"name":"normal protein accumulation during meiosis","type":"related"},{"name":"normal protein level during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004634"}


id: PBO:0038954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 1 pseudogene 1","termid":"PBO:0038954"}


id: PBO:0030959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0030959"}


id: MONDO:0018199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"New-onset refractory status epilepticus is an acute encephalopathy with inflammation-mediated status epilepticus characterized by an acute refractory status epilepticus, typically of the tonic-clonic type, following prodromal symptoms of confusion, fever, fatigue, headache, symptoms of gastrointestinal or upper respiratory tract infection, behavioral changes or hallucinations. Brain MRI abnormalities and abnormal findings in CSF, including pleocytosis and/or elevated protein levels, are frequently found during acute episode. Treatment-resistant epilepsy, cognitive and psychiatric impairments are usual consequences.","definition_xrefs":["Orphanet:363558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"new-onset refractory status epilepticus","secondary_identifiers":["UMLS:C4749462","GARD:12244","MEDGEN:1657271"],"synonyms":[{"name":"De novo cryptogenic refractory multifocal febrile status epilepticus","type":"related"},{"name":"NORSE","type":"exact"},{"name":"New onset refractory status epilepticus","type":"related"},{"name":"Norse","type":"exact"}],"termid":"MONDO:0018199","xrefs":{"Monarch":{"xref_id":"0018199"}}}


id: PBO:0077589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin pseudogene 2","termid":"PBO:0077589"}


id: GO:1905646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of FACT complex assembly.","definition_xrefs":["GO_REF:0000058","PMID:20889714","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of FACT complex assembly","termid":"GO:1905644"},{"relation_name":"positively_regulates","term_name":"FACT complex assembly","termid":"GO:1905635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of FACT complex assembly","synonyms":[{"name":"activation of FACT complex assembly","type":"narrow"},{"name":"activation of FACT complex formation","type":"narrow"},{"name":"activation of Facilitates chromatin transcription complex assembly","type":"narrow"},{"name":"activation of Facilitates chromatin transcription complex formation","type":"narrow"},{"name":"positive regulation of FACT complex formation","type":"exact"},{"name":"positive regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"positive regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"up regulation of FACT complex assembly","type":"exact"},{"name":"up regulation of FACT complex formation","type":"exact"},{"name":"up regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"up regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"up-regulation of FACT complex assembly","type":"exact"},{"name":"up-regulation of FACT complex formation","type":"exact"},{"name":"up-regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"up-regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"upregulation of FACT complex assembly","type":"exact"},{"name":"upregulation of FACT complex formation","type":"exact"},{"name":"upregulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"upregulation of Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905646"}


id: PBO:0031087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_expression_regulation_phenotype","termid":"PBO:0031087"}


id: GO:1905356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["PMID:27268497","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"}


id: MONDO:0025377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sometimes fatal asfivirus infection of pigs, characterized by fever, cough, diarrhea, hemorrhagic lymph nodes, and edema of the gallbladder. It is transmitted between domestic swine by direct contact, ingestion of infected meat, or fomites, or mechanically by biting flies or soft ticks (genus Ornithodoros).","definition_xrefs":["MESH:D000357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African swine fever","synonyms":[{"name":"swine fever, African","type":"related"},{"name":"wart Hog disease","type":"related"},{"name":"wart-Hog disease","type":"related"},{"name":"wart-Hog diseases","type":"related"}],"termid":"MONDO:0025377","xrefs":{"Monarch":{"xref_id":"0025377"}}}


id: GO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell activation involved in immune response","synonyms":[{"name":"cell activation during immune response","type":"related"}],"termid":"GO:0002263"}


id: PBO:0079086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 3-1","termid":"PBO:0079086"}


id: MONDO:0021651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A joint presentation of syndactyly (fusion of digits) and polydactyly (production of supernumerary digits).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synpolydactyly","secondary_identifiers":["SCTID:715724002","UMLS:C2699746","NCIT:C75003","MESH:C538153","NCIT:C125597","MEDGEN:437845","Orphanet:93403","SCTID:84598000","GARD:5087"],"synonyms":[{"name":"SPD","type":"related"},{"name":"polysyndactyly","type":"exact"},{"name":"syndactyly type 2","type":"exact"},{"name":"synpolydactyly","type":"exact"}],"termid":"MONDO:0021651","xrefs":{"Monarch":{"xref_id":"0021651"}}}


id: GO:1905544
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95224],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of L-methionine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:17556368","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"methionine import across plasma membrane","termid":"GO:1903692"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903813"],"synonyms":[{"name":"L-methionine import into cell","type":"exact"}],"termid":"GO:1905544","terms_by_termid":{"GO:1905626":null}}


id: GO:0052123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in host environment (obsolete GO:0052123)","synonyms":[{"name":"negative chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052123"}


id: FYPO:0008095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during G0.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"increased cell size during G0","termid":"FYPO:0008095"}


id: PBO:0040067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP regulated phosphoprotein 21","termid":"PBO:0040067"}


id: MONDO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymoma that is confined within the capsule and may display benign or malignant morphologic characteristics.","definition_xrefs":["NCIT:C7386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"encapsulated thymoma","secondary_identifiers":["DOID:3278","UMLS:C1333383","MEDGEN:232452"],"synonyms":[{"name":"encapsulated thymoma","type":"exact"}],"termid":"MONDO:0002587","xrefs":{"Monarch":{"xref_id":"0002587"}}}


id: GO:0061005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in kidney development","termid":"GO:0061005"}


id: GO:1990539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose substance from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transport","termid":"GO:0015755"},{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fructose import across plasma membrane","secondary_identifiers":["GO:0032445"],"synonyms":[{"name":"fructose import","type":"related"},{"name":"fructose uptake","type":"exact"}],"termid":"GO:1990539"}


id: PBO:0078239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 20/OR9-2 (non-functional)","termid":"PBO:0078239"}


id: FYPO:0001839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at the same frequency as in wild-type cells. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal minichromosome loss","termid":"FYPO:0001839"}


id: PBO:0051253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-16-1 (pseudogene)","termid":"PBO:0051253"}


id: GO:0030748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + an amine = S-adenosyl-L-homocysteine + a methylated amine. Acts on primary, secondary and tertiary amines.","definition_xrefs":["EC:2.1.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"amine N-methyltransferase activity","secondary_identifiers":["MetaCyc:AMINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:amine N-methyltransferase activity","type":"related"},{"name":"arylamine N-methyltransferase activity","type":"narrow"},{"name":"nicotine N-methyltransferase activity","type":"narrow"},{"name":"tryptamine N-methyltransferase activity","type":"narrow"},{"name":"tryptamine methyltransferase","type":"narrow"}],"termid":"GO:0030748"}


id: PBO:0067863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 165","termid":"PBO:0067863"}


id: PBO:0046390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1A binding protein p400","termid":"PBO:0046390"}


id: MONDO:0012133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral semicircular canal malformation, familial, with external and middle ear abnormalities","secondary_identifiers":["OMIM:608814","MESH:C537879","MEDGEN:373305","UMLS:C1837314"],"synonyms":[{"name":"lateral semicircular canal malformation, familial, with external and middle ear abnormalities","type":"exact"}],"termid":"MONDO:0012133","xrefs":{"Monarch":{"xref_id":"0012133"}}}


id: GO:0060726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060726)","synonyms":[{"name":"regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060726"}


id: PBO:0109025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA2 member of B7 family","termid":"PBO:0109025"}


id: GO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"polyketide catabolic process","synonyms":[{"name":"polyketide breakdown","type":"exact"},{"name":"polyketide catabolism","type":"exact"},{"name":"polyketide degradation","type":"exact"}],"termid":"GO:0030640"}


id: PBO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_potential_involving","termid":"PBO:0034324"}


id: GO:0043916
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103528],"is_not":false,"summary":null,"term":"GO:0043916"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 7-methylguanine + H2O = DNA with abasic site + 7-methylguanine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 7-methylguanine and the deoxyribose sugar to remove the 7-methylguanine, leaving an abasic site.","definition_xrefs":["GOC:jl","PMID:16468998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0140097","GO:0016798"],"is_obsolete":false,"name":"DNA-7-methylguanine glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043916","terms_by_termid":{"GO:0043916":null}}


id: PBO:0058828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8058","termid":"PBO:0058828"}


id: GO:0072435
data:
  {"annotated_genes":["SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96452,104340],"is_not":false,"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072458"],"synonyms":[{"name":"mitotic G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"mitotic G2/M transition decatenation checkpoint effector process","type":"related"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling","type":"exact"},{"name":"response to mitotic G2/M transition decatenation checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"},{"name":"response to signal involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0072435","terms_by_termid":{"GO:0072435":null}}


id: PBO:0086158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proper cell fusion and cell morphology; forms a complex with Bud14p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; functions in a complex with Kel2p to negatively regulate mitotic exit, interacts with Tem1p and Lte1p; localizes to regions of polarized growth; potential Cdc28p substrate","termid":"PBO:0086158"}


id: PBO:0091321
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate KM, Mg2+ KM 3.0 mM","termid":"PBO:0091321"}


id: PBO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia induced family protein","termid":"PBO:0002400"}


id: PBO:0076638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 1","termid":"PBO:0076638"}


id: PATO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A circumference which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"circumference","termid":"PATO:0001648"},{"relation_name":"is_a","term_name":"increased perimeter","termid":"PATO:0001712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased circumference","termid":"PATO:0001898"}


id: PBO:0056867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 3","termid":"PBO:0056867"}


id: MONDO:1011452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intervertebral disc disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disc disease, non-human animal","secondary_identifiers":["OMIA:000157"],"termid":"MONDO:1011452","xrefs":{"Monarch":{"xref_id":"1011452"}}}


id: PBO:0065210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40 homolog B","termid":"PBO:0065210"}


id: MONDO:0008707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-renal-mandibular syndrome is a very rare multiple congenital anomalies syndrome characterized by limb deficiencies and renal anomalies that include split hand-split foot malformation, renal agenesis, polycystic kidneys, uterine anomalies and severe mandibular hypoplasia. An autosomal recessive mode of inheritance has been suggested.","definition_xrefs":["Orphanet:958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acro-renal-mandibular syndrome","secondary_identifiers":["MEDGEN:395425","GARD:480","MESH:C535665","OMIM:200980","SCTID:720414005","icd11.foundation:879242648","UMLS:C1860166"],"synonyms":[{"name":"acro-renal-uterine-mandibular syndrome","type":"related"},{"name":"acrorenal mandibular syndrome","type":"related"},{"name":"acrorenal-mandibular syndrome","type":"related"},{"name":"acrorenal-uterine-mandibular syndrome","type":"related"},{"name":"split hand split foot mandibular hypoplasia","type":"related"},{"name":"split hand/split foot-mandibular hypoplasia syndrome","type":"exact"},{"name":"split-hand and split-foot with mandibular hypoplasia","type":"related"}],"termid":"MONDO:0008707","xrefs":{"Monarch":{"xref_id":"0008707"}}}


id: GO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Morphogenesis, during the post-embryonic phase, of an animal tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ morphogenesis (obsolete GO:0048563)","termid":"GO:0048563"}


id: PR:O14017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.14c","synonyms":[{"name":"Spom972h-SPAC29A4.14c","type":"exact"}],"termid":"PR:O14017"}


id: MONDO:0016130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fungal myositis","secondary_identifiers":["MEDGEN:592951","GARD:20380","icd11.foundation:1054267564","Orphanet:207000","SCTID:240111007","UMLS:C0410251"],"termid":"MONDO:0016130","xrefs":{"Monarch":{"xref_id":"0016130"}}}


id: PBO:0078574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51H, pseudogene","termid":"PBO:0078574"}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: PBO:0040019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8","termid":"PBO:0040019"}


id: MONDO:0100108
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[86995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"}]},"cv_name":"mondo","definition":"TPM3-related myopathy is a disorder of the musculoskeletal system that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the skeletal muscle γ-Tropomyosin gene. These variants lead to a variety of overlapping adult onset and congenital myopathies characterized by muscle weakness, hypotonia, motor delay, myopathic facies, scoliosis, and sometimes respiratory involvement. Histologic findings on skeletal muscle biopsy are variable with nemaline and intranuclear bodies, cap-like lesions, fiber-type disproportion, and dystrophic features even in patients with the same mutation.","definition_xrefs":["PMID:24692096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"TPM3-related myopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TPM3 myopathy","type":"exact"},{"name":"TPM3-related myopathy","type":"exact"},{"name":"autosomal dominant TPM3-related myopathy","type":"narrow"},{"name":"congenital myopathy related to TPM3","type":"exact"}],"termid":"MONDO:0100108","terms_by_termid":{"MONDO:0012239":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0100108"}}}


id: SO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA transcript, derived from the transcription of the telomere. These transcripts are antisense of ARRET transcripts.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti_ARRET","synonyms":[{"name":"anti-ARRET","type":"exact"}],"termid":"SO:0001926"}


id: GO:1900737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900736"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"down regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"down-regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"down-regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"down-regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"down-regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"down-regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"down-regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"downregulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"downregulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"downregulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"downregulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"downregulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"downregulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"inhibition of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"inhibition of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"inhibition of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"inhibition of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"inhibition of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"negative regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"negative regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"negative regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"negative regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"negative regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"negative regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900737"}


id: PBO:0073291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 13","termid":"PBO:0073291"}


id: PBO:0089944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane alpha-1,3-glucan synthase Mok12","termid":"PBO:0089944"}


id: GO:0003712
data:
  {"annotated_genes":["SJAG_04099","SJAG_02927","SJAG_02831","SJAG_04820","SJAG_03627","SJAG_01157","SJAG_01111","SJAG_02541","SJAG_04186","SJAG_00861","SJAG_01778","SJAG_00613","SJAG_02849","SJAG_05203","SJAG_01658","SJAG_03590","SJAG_00441","SJAG_01193","SJAG_02846","SJAG_04389","SJAG_02165","SJAG_02255","SJAG_01475","SJAG_04607","SJAG_02401","SJAG_00156","SJAG_00342","SJAG_02494","SJAG_04205","SJAG_02196","SJAG_00641","SJAG_03599","SJAG_03924","SJAG_05341","SJAG_01771","SJAG_03573","SJAG_03945","SJAG_02066","SJAG_01952","SJAG_04613","SJAG_03441","SJAG_04274","SJAG_03776","SJAG_02671","SJAG_02329","SJAG_03527","SJAG_00164","SJAG_03845","SJAG_00822","SJAG_00809","SJAG_02391","SJAG_04381","SJAG_00290","SJAG_00184","SJAG_00269","SJAG_01711","SJAG_03668","SJAG_06638","SJAG_02990","SJAG_03752","SJAG_00904","SJAG_03981","SJAG_01804","SJAG_04396","SJAG_00297","SJAG_02474","SJAG_02385","SJAG_01926","SJAG_05153","SJAG_01403","SJAG_00909","SJAG_00584","SJAG_04705","SJAG_01916","SJAG_01113","SJAG_02458","SJAG_04647","SJAG_03622","SJAG_03664","SJAG_04921","SJAG_00087","SJAG_04213","SJAG_01728","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73638,78532,79335,79567,79644,79857,81441,90669,97807],"is_not":false,"summary":null,"term":"GO:0003712"},{"annotations":[76730,108705,95984,101223,96239,105314,107739,99747,92562,97296,73330,109394,90991,100502,119645,119597,108346,77076,109306,108878,92248,96350,91165,79430,110216,114987,116753,105118,114303,62905,98078,105364,110737,93308,97777,100953,108208,103902,120983,121149,80088,62679,113756,75276,78909,77352,95387,109031,116329,80388,100600,96995,102429,104810,121148,90368,110711,105623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003713"},{"annotations":[108706,80934,111339,99139,93146,71853,95098,100813,106211,77114,75436,106272,79132,74987,108976,105908,114097,95136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003714"}]},"cv_name":"molecular_function","definition":"A transcription regulator activity that modulates the transcription of specific gene sets via binding to a DNA-binding transcription factor at a specific genomic locus, either on its own or as part of a complex. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["Wikipedia:Transcription_coregulator","PMID:25957681","PMID:10213677","PMID:16858867","GOC:txnOH-2018","PMID:24203923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"},{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":84,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00156":null,"SJAG_00164":null,"SJAG_00184":null,"SJAG_00269":null,"SJAG_00290":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00441":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00809":null,"SJAG_00822":null,"SJAG_00861":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01111":null,"SJAG_01113":null,"SJAG_01157":null,"SJAG_01193":null,"SJAG_01403":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01728":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01804":null,"SJAG_01916":null,"SJAG_01926":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02196":null,"SJAG_02255":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02401":null,"SJAG_02458":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02541":null,"SJAG_02671":null,"SJAG_02773":null,"SJAG_02831":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03441":null,"SJAG_03527":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03622":null,"SJAG_03627":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03845":null,"SJAG_03924":null,"SJAG_03945":null,"SJAG_03981":null,"SJAG_04099":null,"SJAG_04186":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04381":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_04921":null,"SJAG_05153":null,"SJAG_05203":null,"SJAG_05341":null,"SJAG_06638":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0140110","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"transcription coregulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016455","GO:0001104"],"synonyms":[{"name":"RNA polymerase II transcriptional cofactor activity","type":"related"},{"name":"nuclear receptor coreceptor activity","type":"narrow"},{"name":"transcription cofactor activity","type":"exact"},{"name":"transcription coreceptor activity","type":"exact"},{"name":"transcriptional co-regulator","type":"exact"}],"termid":"GO:0003712","terms_by_termid":{"GO:0003712":null,"GO:0003713":null,"GO:0003714":null}}


id: PBO:0071310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 33","termid":"PBO:0071310"}


id: PBO:0079021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 4-1","termid":"PBO:0079021"}


id: MONDO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the DMD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dystrophin","termid":"MONDO:0016147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 3B","secondary_identifiers":["MESH:C580047","OMIM:302045","DOID:0060561","UMLS:C3668940","DOID:0110461","SCTID:702424003","DOID:0081164","GARD:15287","MEDGEN:777148","ICD9:425.4"],"synonyms":[{"name":"CMD3B","type":"exact"},{"name":"DMD dilated cardiomyopathy","type":"exact"},{"name":"DMD-related dilated cardiomyopathy","type":"related"},{"name":"X-linked dilated cardiomyopathy","type":"related"},{"name":"cardiomyopathy, dilated, 3B","type":"related"},{"name":"cardiomyopathy, dilated, X-linked","type":"related"},{"name":"cardiomyopathy, dilated, type 3B","type":"exact"},{"name":"dilated cardiomyopathy 3B","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in DMD","type":"exact"},{"name":"dilated cardiomyopathy type 3B","type":"exact"}],"termid":"MONDO:0010542","xrefs":{"Monarch":{"xref_id":"0010542"}}}


id: PBO:0081594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519","termid":"PBO:0081594"}


id: GO:1904802
data:
  {"annotated_genes":["SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75731],"is_not":false,"summary":null,"term":"GO:1904802"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a RITS complex.","definition_xrefs":["GOC:TermGenie","PMID:26443059","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"RITS complex assembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RITS complex formation","type":"exact"}],"termid":"GO:1904802","terms_by_termid":{"GO:1904802":null}}


id: MONDO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cronkhite-Canada syndrome (obsolete MONDO:0003815)","termid":"MONDO:0003815","xrefs":{"Monarch":{"xref_id":"0003815"}}}


id: MONDO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroidal sclerosis","termid":"MONDO:0004885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"senile atrophy of choroid","secondary_identifiers":["UMLS:C0154891","SCTID:38513001","DOID:9776","MEDGEN:509701","ICD9:363.41"],"termid":"MONDO:0004879","xrefs":{"Monarch":{"xref_id":"0004879"}}}


id: PBO:0091552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleterious Haploid Meiosis","termid":"PBO:0091552"}


id: PBO:0060922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 9","termid":"PBO:0060922"}


id: PBO:0049623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 26","termid":"PBO:0049623"}


id: MONDO:1010880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cats due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, domestic cat","termid":"MONDO:1011571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, domestic cat","secondary_identifiers":["OMIA:001443-9685"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, domestic cat","type":"related"}],"termid":"MONDO:1010880","xrefs":{"Monarch":{"xref_id":"1010880"}}}


id: PBO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 like 1, pseudogene","termid":"PBO:0042275"}


id: FYPO:0001923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein dephosphorylation is normal (i.e. indistinguishable from wild type) during the G2/M phase transition of the mitotic cell cycle. Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein dephosphorylation during vegetative growth","termid":"FYPO:0001922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein dephosphorylation during mitotic G2/M transition","synonyms":[{"name":"normal protein dephosphorylation during G2/M phase transition","type":"exact"},{"name":"normal protein dephosphorylation during G2/M transition during vegetative growth","type":"exact"},{"name":"normal protein dephosphorylation during G2/M transition of mitotic cell cycle","type":"exact"},{"name":"normal protein/peptide dephosphorylation during mitotic G2/M transition","type":"exact"}],"termid":"FYPO:0001923"}


id: MONDO:0017195
data:
  {"annotated_genes":["SJAG_01005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009806"}]},"cv_name":"mondo","definition":"Bruck syndrome is characterized by the association of osteogenesis imperfecta and congenital joint contractures.","definition_xrefs":["Orphanet:2771"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01005":null},"genotype_count":0,"is_obsolete":false,"name":"Bruck syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:609420","ICD9:733.99","GARD:1029","SCTID:254113006","icd11.foundation:1783996418","MedDRA:10063718","DOID:0060231","OMIMPS:259450","UMLS:C0432253"],"synonyms":[{"name":"osteogenesis imperfecta with congenital joint contractures","type":"exact"},{"name":"osteogenesis imperfecta-congenital joint contractures syndrome","type":"exact"}],"termid":"MONDO:0017195","terms_by_termid":{"MONDO:0009806":null},"xrefs":{"Monarch":{"xref_id":"0017195"}}}


id: PBO:0046944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member A","termid":"PBO:0046944"}


id: MONDO:0018685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incessant infant ventricular tachycardia is a rare type of ventricular tachycardia (VT) characterized by the presence of tachycardia originating from the ventricles, observed for more than 10% of a 24 hour monitoring period. Patients are either asymptomatic or present congestive heart failure.","definition_xrefs":["Orphanet:45453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"incessant infant ventricular tachycardia","secondary_identifiers":["SCTID:233908008","MEDGEN:573762","GARD:18832","ICD10CM:I47.2","icd11.foundation:1364925734","UMLS:C0340487"],"termid":"MONDO:0018685","xrefs":{"Monarch":{"xref_id":"0018685"}}}


id: PBO:0078105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC12 antisense RNA 1","termid":"PBO:0078105"}


id: PBO:0025451
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hypercholesterolemia","termid":"PBO:0025451"}


id: PBO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 1","termid":"PBO:0045797"}


id: PBO:0031769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fermentation","termid":"PBO:0031769"}


id: PBO:0076937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFG pseudogene 1","termid":"PBO:0076937"}


id: PBO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel regulatory subunit Yam8","termid":"PBO:0000253"}


id: PBO:0084063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein of the Ras superfamily; acts primarily on Sec4p, localizes to the bud site and bud tip; msb3 msb4 double mutation causes defects in secretion and actin organization; similar to the TBC-domain Tre2 oncogene; MSB4 has a paralog, MSB3, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null mutant","termid":"PBO:0084063"}


id: PBO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 1","termid":"PBO:0061931"}


id: GO:0031878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 somatostatin receptor binding","synonyms":[{"name":"type 1 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031878"}


id: MONDO:0021484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the maxillary sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"maxillary sinus neoplasm","termid":"MONDO:0006850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of maxillary sinus","secondary_identifiers":["UMLS:C0345666","icd11.foundation:1738455612","MEDGEN:138024","ICD9:212.0","SCTID:92211008","NCIT:C4414"],"synonyms":[{"name":"benign maxillary antrum neoplasm","type":"exact"},{"name":"benign maxillary antrum tumor","type":"exact"},{"name":"benign maxillary antrum tumour","type":"exact"},{"name":"benign maxillary sinus neoplasm","type":"exact"},{"name":"benign maxillary sinus tumor","type":"exact"},{"name":"benign maxillary sinus tumour","type":"exact"},{"name":"benign maxillofacial sinus neoplasm","type":"exact"},{"name":"benign maxillofacial sinus tumor","type":"exact"},{"name":"benign maxillofacial sinus tumour","type":"exact"},{"name":"benign neoplasm of maxillary antrum","type":"exact"},{"name":"benign neoplasm of maxillofacial sinus","type":"exact"},{"name":"benign neoplasm of the maxillary antrum","type":"exact"},{"name":"benign neoplasm of the maxillary sinus","type":"exact"},{"name":"benign neoplasm of the maxillofacial sinus","type":"exact"},{"name":"benign tumor of maxillary antrum","type":"exact"},{"name":"benign tumor of maxillary sinus","type":"exact"},{"name":"benign tumor of maxillofacial sinus","type":"exact"},{"name":"benign tumor of the maxillary antrum","type":"exact"},{"name":"benign tumor of the maxillary sinus","type":"exact"},{"name":"benign tumor of the maxillofacial sinus","type":"exact"},{"name":"benign tumour of maxillary antrum","type":"exact"},{"name":"benign tumour of maxillary sinus","type":"exact"},{"name":"benign tumour of maxillofacial sinus","type":"exact"},{"name":"benign tumour of the maxillary antrum","type":"exact"},{"name":"benign tumour of the maxillary sinus","type":"exact"},{"name":"benign tumour of the maxillofacial sinus","type":"exact"},{"name":"maxillary sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021484","xrefs":{"Monarch":{"xref_id":"0021484"}}}


id: PBO:0045163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 3","termid":"PBO:0045163"}


id: PBO:0084534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; binds directly to U6 snRNA; similar to S. pombe Cwf2","termid":"PBO:0084534"}


id: PBO:0086873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; localizes to membrane contact sites throughout the cell, including nucleus-vacuole junctions and ER-mitochondrial contact sites","termid":"PBO:0086873"}


id: GO:0017007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of bilin and a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-tetrapyrrole linkage","termid":"GO:0017006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-bilin linkage","termid":"GO:0017007"}


id: GO:0034366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mature high-density lipoprotein (HDL) particle, converted from discoidal HDL particles following the esterification of cholesterol in the particle by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT).","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-density lipoprotein particle","termid":"GO:0034364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"spherical high-density lipoprotein particle","synonyms":[{"name":"mature HDL","type":"exact"},{"name":"mature high-density lipoprotein particle","type":"exact"},{"name":"spherical HDL","type":"exact"}],"termid":"GO:0034366"}


id: MONDO:0032630
data:
  {"annotated_genes":["SJAG_01820"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88090],"is_not":false,"summary":null,"term":"MONDO:0032630"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 26","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618247","UMLS:C4748809","DOID:0112086","MEDGEN:1648283"],"synonyms":[{"name":"MC1DN26","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 26","type":"related"}],"termid":"MONDO:0032630","terms_by_termid":{"MONDO:0032630":null},"xrefs":{"Monarch":{"xref_id":"0032630"}}}


id: PBO:0045638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 50 (pseudogene)","termid":"PBO:0045638"}


id: PBO:0086848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative redox protein containing a thioredoxin fold; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086848"}


id: PBO:0078430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 1-1","termid":"PBO:0078430"}


id: PBO:0063698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase 1, pseudogene 2","termid":"PBO:0063698"}


id: PBO:0034336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_Is_bouton_to","termid":"PBO:0034336"}


id: GO:1900151
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151","terms_by_termid":{"GO:0060212":null}}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_02162","SJAG_00341","SJAG_02651","SJAG_00192","SJAG_02044","SJAG_03651","SJAG_01022","SJAG_00439","SJAG_02591","SJAG_03219","SJAG_02822","SJAG_00615"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61196,75836,82143,90432,97453,104817],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[99696,92482,106829,112311,96243,111063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: GO:0090486
data:
  {"annotated_genes":["SJAG_02817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111107],"is_not":false,"summary":null,"term":"GO:0090486"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA = S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide.","definition_xrefs":["GOC:tb","GOC:vw","RHEA:37887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.386"],"synonyms":[{"name":"small RNA 2'-O-methyltransferase","type":"exact"}],"termid":"GO:0090486","terms_by_termid":{"GO:0090486":null}}


id: MONDO:1030007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypertensive disorder that is characterized by marked elevation in blood pressure, such as systolic blood pressure greater than 180 mmHg or diastolic blood pressure greater than 110 mmHg, and without evidence of target organ damage, such as pulmonary edema, cardiac ischemia, neurologic deficits, or acute renal failure.","definition_xrefs":["icd11.foundation:896211058","PMID:30020723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertensive urgency","secondary_identifiers":["NCIT:C197914","MEDGEN:677063","SCTID:443482000","UMLS:C0745138"],"synonyms":[{"name":"hypertensive crisis without acute organ damage","type":"exact"},{"name":"severely elevated blood pressure without acute organ damage","type":"exact"}],"termid":"MONDO:1030007","xrefs":{"Monarch":{"xref_id":"1030007"}}}


id: PBO:0046613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER34 member 1, envelope","termid":"PBO:0046613"}


id: MONDO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from skeletal muscle.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle neoplasm","termid":"MONDO:0002848"},{"relation_name":"is_a","term_name":"muscle cancer","termid":"MONDO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"skeletal muscle cancer","secondary_identifiers":["MEDGEN:233669","DOID:4043","UMLS:C1334619","NCIT:C6516"],"synonyms":[{"name":"cancer of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of skeletal muscle","type":"exact"},{"name":"malignant neoplasm of skeletal muscle tissue","type":"exact"},{"name":"malignant neoplasm of the skeletal muscle","type":"exact"},{"name":"malignant skeletal muscle neoplasm","type":"exact"},{"name":"malignant skeletal muscle tissue neoplasm","type":"exact"},{"name":"malignant skeletal muscle tumor","type":"exact"},{"name":"malignant skeletal muscle tumour","type":"exact"},{"name":"malignant tumor of skeletal muscle","type":"exact"},{"name":"malignant tumor of the skeletal muscle","type":"exact"},{"name":"malignant tumour of skeletal muscle","type":"exact"},{"name":"malignant tumour of the skeletal muscle","type":"exact"},{"name":"skeletal muscle tissue cancer","type":"exact"}],"termid":"MONDO:0002847","xrefs":{"Monarch":{"xref_id":"0002847"}}}


id: PATO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000662 volume_quantity (obsolete PATO:0000662)","termid":"PATO:0000662"}


id: PBO:0080860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 1","termid":"PBO:0080860"}


id: PBO:0027091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_decreasing_rDNA_copy_number_during_successive_meiotic_generations","termid":"PBO:0027091"}


id: PBO:0068126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 433","termid":"PBO:0068126"}


id: GO:0021716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the inferior olivary nucleus structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"medulla oblongata structural organization","termid":"GO:0021581"},{"relation_name":"part_of","term_name":"inferior olivary nucleus morphogenesis","termid":"GO:0021714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus structural organization","synonyms":[{"name":"inferior olivary nucleus structural organisation","type":"exact"},{"name":"inferior olive structural organization","type":"related"}],"termid":"GO:0021716"}


id: PBO:0066563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 2","termid":"PBO:0066563"}


id: PBO:0055837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich alpha-2-glycoprotein 1","termid":"PBO:0055837"}


id: GO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"positively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascus development","termid":"GO:0075319"}


id: PR:000025001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from propeptide removal from M-factor precursor, farnesylated 1. In Schizosaccharomyces pombe 972h- the sequence is YTPKVPYMC, with a farnesylated C-terminal residue.","definition_xrefs":["PMID:1547790","PMID:8196631","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature M-factor","synonyms":[{"name":"PomBase_original_PRO_term_name: M-factor","type":"exact"},{"name":"mature M-factor","type":"exact"}],"termid":"PR:000025001"}


id: GO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine metabolic process","synonyms":[{"name":"phenylethylamine metabolism","type":"exact"}],"termid":"GO:0042443"}


id: GO:0045311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a pheromone stimulus.","definition_xrefs":["GOC:mcc","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"},{"relation_name":"part_of","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to pheromone","termid":"GO:0045311"}


id: MONDO:0015016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"},{"relation_name":"is_a","term_name":"CYP1B1-related glaucoma with or without anterior segment dysgenesis","termid":"MONDO:0800472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 6","secondary_identifiers":["UMLS:C4310623","MEDGEN:934590","DOID:0080611","OMIM:617315"],"synonyms":[{"name":"ASGD6","type":"exact"},{"name":"anterior segment dysgenesis 6","type":"exact"},{"name":"anterior segment dysgenesis 6, multiple subtypes","type":"exact"},{"name":"anterior segment dysgenesis type 6","type":"exact"}],"termid":"MONDO:0015016","xrefs":{"Monarch":{"xref_id":"0015016"}}}


id: MONDO:0004727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the oral opening.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"vestibule of mouth cancer","secondary_identifiers":["ICD9:145.1","MEDGEN:509267","DOID:9188","UMLS:C0153374","ICD10CM:C06.1","SCTID:187658004"],"synonyms":[{"name":"cancer of oral opening","type":"exact"},{"name":"malignant neoplasm of oral opening","type":"exact"},{"name":"malignant neoplasm of vestibule of mouth","type":"exact"},{"name":"malignant oral opening neoplasm","type":"exact"},{"name":"malignant tumor of vestibule of mouth","type":"exact"},{"name":"malignant tumour of vestibule of mouth","type":"exact"},{"name":"oral opening cancer","type":"exact"}],"termid":"MONDO:0004727","xrefs":{"Monarch":{"xref_id":"0004727"}}}


id: GO:0016806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of N-terminal di- or tripeptides from a polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase and tripeptidyl-peptidase activity (obsolete GO:0016806)","synonyms":[{"name":"dipeptidyl-peptidase and tripeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0016806"}


id: FYPO:0001435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing erythromycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on erythromycin","synonyms":[{"name":"normal cell population growth in presence of erythromycin","type":"exact"},{"name":"normal cell population growth on erythromycin","type":"exact"},{"name":"normal cellular response to erythromycin","type":"related"},{"name":"normal vegetative cell population growth on erythromycin","type":"exact"}],"termid":"FYPO:0001435"}


id: MONDO:0005060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually painless malignant tumor that arises from adipose tissue. Microscopically, it may contain a spectrum of neoplastic adipocytes ranging from lipoblasts to pleomorphic malignant adipocytes. Morphologic variants include: well differentiated, dedifferentiated, pleomorphic, and myxoid liposarcoma. The metastatic potential is higher in less differentiated tumors.","definition_xrefs":["NCIT:C3194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatous cancer","termid":"MONDO:0002813"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma","secondary_identifiers":["GARD:6913","ICD9:171.9","NORD:1925","ONCOTREE:LIPO","NANDO:2200065","Orphanet:69078","MedDRA:10024627","MESH:D008080","SCTID:254829001","UMLS:C0023827","DOID:3382","EFO:0000569","MEDGEN:44177","ICDO:8850/3"],"synonyms":[{"name":"lip sarcoma","type":"exact"},{"name":"liposarcoma","type":"exact"},{"name":"liposarcoma, malignant","type":"exact"},{"name":"sarcoma of lip","type":"exact"}],"termid":"MONDO:0005060","xrefs":{"Monarch":{"xref_id":"0005060"}}}


id: PBO:0052326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1549 like","termid":"PBO:0052326"}


id: PBO:0082044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase; converts D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate in the presence of FAD, with concomitant reduction of pyruvate to D-lactate; minor lactate dehydrogenase activity; component of the retrograde regulon that consists of genes whose expression are stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source; located in the cytoplasm","termid":"PBO:0082044"}


id: PBO:0091573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mis6-Sim4 complex subunit Fta6","termid":"PBO:0091573"}


id: GO:2000883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"positive regulation of starch metabolic process","termid":"GO:2000906"},{"relation_name":"positively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of starch catabolic process","synonyms":[{"name":"positive regulation of starch breakdown","type":"exact"},{"name":"positive regulation of starch catabolism","type":"exact"},{"name":"positive regulation of starch degradation","type":"exact"}],"termid":"GO:2000883"}


id: PBO:0052755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 47","termid":"PBO:0052755"}


id: GO:0043376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043376"}


id: PBO:0080671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2","termid":"PBO:0080671"}


id: GO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD + H2O = AMP + FMN.","definition_xrefs":["RHEA:13889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"FAD diphosphatase activity","secondary_identifiers":["EC:3.6.1.18","MetaCyc:FAD-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"FAD nucleotidohydrolase activity","type":"related"},{"name":"FAD pyrophosphatase activity","type":"exact"},{"name":"FAD pyrophosphohydrolase activity","type":"exact"},{"name":"flavin adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"flavine adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"riboflavin adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"riboflavine adenine dinucleotide pyrophosphatase activity","type":"related"}],"termid":"GO:0047884"}


id: GO:0090211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"positively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of blood-brain barrier","synonyms":[{"name":"positive regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090211"}


id: PR:000044503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe) that has been phosphorylated on a Ser residue within the C-terminal self-inhibitory tail. Example: UniProtKB:P87050-1, Ser-755, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:24316795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe)","termid":"PR:000030008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"cdr2 phosphorylated","type":"related"}],"termid":"PR:000044503"}


id: GO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An error-prone process for repairing damaged microbial DNA.","definition_xrefs":["GOC:jl","PMID:16000023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SOS response","secondary_identifiers":["Wikipedia:SOS_response"],"termid":"GO:0009432"}


id: PBO:0116848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane beta-glucan biosynthesis protein Max1","termid":"PBO:0116848"}


id: GO:1901026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of ripoptosome components leading to a necroptotic process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:22274400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ripoptosome assembly","termid":"GO:0097343"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ripoptosome assembly involved in necroptotic process","synonyms":[{"name":"ripoptosome assembly involved in necroptosis","type":"narrow"}],"termid":"GO:1901026"}


id: PR:Q9URY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URY4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase C869.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.01","synonyms":[{"name":"Spom972h-SPAC869.01","type":"exact"}],"termid":"PR:Q9URY4"}


id: PBO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1306, pseudogene","termid":"PBO:0070009"}


id: PBO:0031502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_fatty_acid_synthase_activity","termid":"PBO:0031502"}


id: GO:0061335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of an epithelial cell dependent on cycles of endoreplication, where growth contributes to the shaping of the Malpighian tubule.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in Malpighian tubule morphogenesis","termid":"GO:0061335"}


id: PBO:0069102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 349, pseudogene","termid":"PBO:0069102"}


id: PBO:0040334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 2","termid":"PBO:0040334"}


id: PBO:0066752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 50","termid":"PBO:0066752"}


id: PBO:0039921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 19","termid":"PBO:0039921"}


id: MONDO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vagus nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve disorder","secondary_identifiers":["ICD9:352.3","SCTID:73765005","MESH:D020421","UMLS:C0152179","MEDGEN:101824","DOID:12491","NCIT:C27591"],"synonyms":[{"name":"Vagus nerve disorder","type":"exact"},{"name":"disease of vagus nerve","type":"exact"},{"name":"disease or disorder of vagus nerve","type":"exact"},{"name":"disorder of pneumogastric [10th] nerve","type":"exact"},{"name":"disorder of vagal nerve","type":"exact"},{"name":"disorder of vagus nerve","type":"exact"},{"name":"vagus nerve disease","type":"exact"},{"name":"vagus nerve disease or disorder","type":"exact"}],"termid":"MONDO:0001535","xrefs":{"Monarch":{"xref_id":"0001535"}}}


id: FYPO:0001722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased sodium export","synonyms":[{"name":"decreased cellular sodium export","type":"exact"},{"name":"decreased sodium export during mitotic cell cycle","type":"related"},{"name":"decreased sodium export during vegetative growth","type":"exact"},{"name":"decreased sodium export from cell","type":"exact"},{"name":"decreased sodium ion export","type":"exact"},{"name":"reduced sodium export","type":"exact"}],"termid":"FYPO:0001722"}


id: PBO:0045885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1","termid":"PBO:0045885"}


id: PBO:0046616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group S71 member 1, envelope","termid":"PBO:0046616"}


id: RO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds via some environmental process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evolutionarily_related_to","termid":"RO:0002320"}


id: GO:1902807
data:
  {"annotated_genes":["SJAG_03681","SJAG_01401","SJAG_02026","SJAG_00991","SJAG_01210","SJAG_00071","SJAG_00996","SJAG_05346","SJAG_00169","SJAG_03048","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90819,103566,104306,110877,117924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[93197,111662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[100801,94050,95220,93635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"negatively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"down-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"downregulation of cell cycle G1/S phase transition","type":"exact"},{"name":"inhibition of cell cycle G1/S phase transition","type":"narrow"}],"termid":"GO:1902807","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: PBO:0059906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 29","termid":"PBO:0059906"}


id: FYPO:0001009
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121205,121220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring.","definition_xrefs":["PMID:19713940","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation","type":"related"},{"name":"abolished contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic ring assembly","type":"related"},{"name":"abolished cytokinetic ring formation","type":"related"},{"name":"abolished mitotic contractile ring assembly","type":"exact"},{"name":"actomyosin contractile ring assembly abolished","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent","type":"related"}],"termid":"FYPO:0001009","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:0050660
data:
  {"annotated_genes":["SJAG_03804","SJAG_04032","SJAG_01671","SJAG_04459","SJAG_04042","SJAG_04608","SJAG_02827","SJAG_03240","SJAG_01162","SJAG_02489","SJAG_01903","SJAG_03236","SJAG_01693","SJAG_04000","SJAG_00235","SJAG_04054","SJAG_00972","SJAG_02599","SJAG_00370","SJAG_00174","SJAG_04270","SJAG_01466","SJAG_03985","SJAG_01063","SJAG_04743","SJAG_01041","SJAG_04367","SJAG_03712","SJAG_00265","SJAG_02496","SJAG_02876","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60113,61136,63310,66092,67091,67190,73517,76325,77786,77839,78001,78016,79012,80114,80855,80887,96008,114807,120829],"is_not":false,"summary":null,"term":"GO:0050660"},{"annotations":[59843,72674,73617,94236,71431,71466,111674,78044,115021,61188,65657,72014,70686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071949"}]},"cv_name":"molecular_function","definition":"Binding to FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.","definition_xrefs":["ISBN:0198506732","GOC:ai","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00370":null,"SJAG_00972":null,"SJAG_01041":null,"SJAG_01063":null,"SJAG_01162":null,"SJAG_01466":null,"SJAG_01671":null,"SJAG_01693":null,"SJAG_01903":null,"SJAG_02489":null,"SJAG_02496":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_02876":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_03290":null,"SJAG_03712":null,"SJAG_03804":null,"SJAG_03985":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04042":null,"SJAG_04054":null,"SJAG_04270":null,"SJAG_04367":null,"SJAG_04459":null,"SJAG_04608":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavin adenine dinucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAD or FADH2 binding","type":"exact"},{"name":"flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0050660","terms_by_termid":{"GO:0050660":null,"GO:0071949":null}}


id: MONDO:0023106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Fairbank disease","secondary_identifiers":["MEDGEN:343598","MESH:C536393","UMLS:C1851537"],"synonyms":[{"name":"Fairbank multiple epiphyseal dysplasia","type":"related"},{"name":"dysplasia epiphysealis multiplex","type":"related"},{"name":"epiphyseal dysplasia Fairbank type","type":"related"},{"name":"epiphyseal dysplasia, Fairbank type","type":"related"},{"name":"epiphyseal dysplasia, ribbing type","type":"related"}],"termid":"MONDO:0023106","xrefs":{"Monarch":{"xref_id":"0023106"}}}


id: PBO:0051489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 6","termid":"PBO:0051489"}


id: FYPO:0005563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are longer and thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick stable microtubule bundle","termid":"FYPO:0005559"},{"relation_name":"is_a","term_name":"long stable microtubule bundle","termid":"FYPO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"long, thick stable microtubule bundle","synonyms":[{"name":"elongated, thick stable microtubule bundle","type":"exact"},{"name":"increased stable microtubule bundle length and thickness","type":"exact"},{"name":"long, thick Q-MT bundles","type":"exact"},{"name":"long, thick quiescent cell MT bundle","type":"exact"},{"name":"long, thick quiescent cell microtubule bundle","type":"exact"},{"name":"long, thick stable microtubule array","type":"related"},{"name":"long, thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005563"}


id: GO:0061780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin loading (obsolete GO:0061780)","termid":"GO:0061780"}


id: GO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, out of a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"auxin efflux transmembrane transporter activity","synonyms":[{"name":"auxin efflux carrier","type":"related"},{"name":"auxin efflux facilitator","type":"related"}],"termid":"GO:0010329"}


id: RO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits","termid":"RO:0002618"}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: GO:0051016
data:
  {"annotated_genes":["SJAG_02700","SJAG_01894","SJAG_01993","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77320,80930,81987,94217],"is_not":false,"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"barbed-end actin filament capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"barbed-end F-actin capping activity","type":"exact"},{"name":"barbed-end actin capping activity","type":"exact"},{"name":"plus-end F-actin capping activity","type":"exact"},{"name":"plus-end actin filament capping activity","type":"exact"}],"termid":"GO:0051016","terms_by_termid":{"GO:0051016":null}}


id: PBO:0063661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 2","termid":"PBO:0063661"}


id: GO:0030598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the N-glycosylic bond at A-4324 in 28S rRNA from rat ribosomes or corresponding sites in 28S RNA from other species.","definition_xrefs":["EC:3.2.2.22","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA glycosylase activity","termid":"GO:0030597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a rRNA","termid":"GO:0140102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"rRNA N-glycosylase activity","secondary_identifiers":["MetaCyc:3.2.2.22-RXN"],"synonyms":[{"name":"RNA N-glycosidase activity","type":"related"},{"name":"gelonin","type":"related"},{"name":"mirabilis antiviral protein","type":"related"},{"name":"momorcochin-S","type":"related"},{"name":"nigrin b","type":"related"},{"name":"rRNA N-glycohydrolase activity","type":"related"},{"name":"rRNA N-glycosidase activity","type":"exact"},{"name":"ribosomal ribonucleate N-glycosidase activity","type":"related"},{"name":"ricin","type":"related"},{"name":"saporins","type":"related"}],"termid":"GO:0030598"}


id: MONDO:0014741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"DeSanto-Shinawi syndrome","termid":"MONDO:0018760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSanto-Shinawi syndrome due to WAC point mutation","secondary_identifiers":["MEDGEN:1841517","Orphanet:466950","GARD:17839","OMIM:616708","UMLS:C5681129"],"synonyms":[{"name":"DESANTO-SHINAWI syndrome","type":"broad"},{"name":"DESSH","type":"broad"},{"name":"Desanto-Shinawi syndrome","type":"broad"},{"name":"chromosome 10P12-p11 deletion syndrome","type":"related"},{"name":"developmental delay, behavioral abnormalities, Facial Dysmorphism, and ocular abnormalities","type":"related"},{"name":"developmental delay, behavioural abnormalities, Facial Dysmorphism, and ocular abnormalities","type":"related"},{"name":"facial dysmorphism-developmental delay-behavioral abnormalities syndrome due to WAC point mutation","type":"exact"}],"termid":"MONDO:0014741","xrefs":{"Monarch":{"xref_id":"0014741"}}}


id: PBO:0111648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Ncb2","termid":"PBO:0111648"}


id: PBO:0074218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 antisense RNA 1","termid":"PBO:0074218"}


id: PBO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 1","termid":"PBO:0045670"}


id: MONDO:0012172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitochondrial trifunctional protein (TFP) deficiency (TFPD) is a disorder of fatty acid oxidation characterized by a wide clinical spectrum ranging from severe neonatal manifestations including cardiomyopathy, hypoglycemia, metabolic acidosis, skeletal myopathy and neuropathy, liver disease and death to a mild phenotype with peripheral polyneuropathy, episodic rhabdomyolysis and pigmentary retinopathy..","definition_xrefs":["Orphanet:746"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long chain 3-hydroxyacyl-CoA dehydrogenase deficiency","termid":"MONDO:0012173"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336","MONDO:0002525"],"is_obsolete":false,"name":"mitochondrial trifunctional protein deficiency","secondary_identifiers":["MEDGEN:370665","OMIMPS:609015","ICD9:277.85","MESH:C566945","icd11.foundation:1018083832","NANDO:2200515","NCIT:C98991","NANDO:2201147","UMLS:C1969443","SCTID:237999008","DOID:0111277","GARD:3684","NANDO:1200974"],"synonyms":[{"name":"MTPD","type":"related"},{"name":"TFP deficiency","type":"exact"},{"name":"TFPD","type":"exact"},{"name":"mitochondrial trifunctional PROTEIN deficiency","type":"related"},{"name":"mitochondrial trifunctional protein deficiency","type":"exact"},{"name":"trifunctional Protein deficiency","type":"related"},{"name":"trifunctional Protein deficiency with myopathy and neuropathy","type":"related"}],"termid":"MONDO:0012172","xrefs":{"Monarch":{"xref_id":"0012172"}}}


id: PBO:0038587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA carboxylase alpha","termid":"PBO:0038587"}


id: PBO:0080063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32","termid":"PBO:0080063"}


id: MONDO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Krabbe disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005244","MONDO:0002525","MONDO:0005559","MONDO:0002039","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"adult Krabbe disease","secondary_identifiers":["icd11.foundation:699668826","NANDO:1200077","NANDO:2201219","Orphanet:206448","MEDGEN:120623","UMLS:C0268252","GARD:20345"],"synonyms":[{"name":"Krabbe disease of adults","type":"exact"}],"termid":"MONDO:0016091","xrefs":{"Monarch":{"xref_id":"0016091"}}}


id: PBO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product was previously annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. This mapping was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034793"}


id: GO:0070581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA-dependent DNA replication process in which a single-stranded DNA molecule is synthesized from a circular duplex template. Replication typically does not cease when one circumference has been replicated, but continues around the circumference several more times, producing a long single strand comprising multimers of the replicon.","definition_xrefs":["GOC:cb","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"rolling circle DNA replication","synonyms":[{"name":"rolling circle replication","type":"exact"}],"termid":"GO:0070581"}


id: PBO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3","termid":"PBO:0000176"}


id: PBO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein","termid":"PBO:0003701"}


id: MONDO:0013391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peroxisomal neurodegenerative disorder characterized by spasmodic torticollis, dystonic head tremor, intention tremor, nystagmus, hyposmia, and hypergonadotrophic hypogonadism with azoospermia. Slight cerebellar signs (left-sided intention tremor, balance and gait impairment) are also noted. Magnetic resonance imaging (MRI) shows bilateral hyperintense signals in the thalamus, butterfly-like lesions in the pons, and lesions in the occipital region, whereas nerve conduction studies of the lower extremities shows a predominantly motor and slight sensory neuropathy.","definition_xrefs":["Orphanet:163684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"sterol carrier protein 2 deficiency","secondary_identifiers":["UMLS:C3150990","NANDO:1200767","OMIM:613724","MEDGEN:462340","GARD:12471"],"synonyms":[{"name":"LKDMN","type":"related"},{"name":"SCP2 deficiency","type":"exact"},{"name":"leukoencephalopathy - dystonia - motor neuropathy","type":"related"},{"name":"leukoencephalopathy with dystonia and motor neuropathy","type":"related"},{"name":"leukoencephalopathy-dystonia-motor neuropathy syndrome","type":"exact"},{"name":"sterol carrier protein 2 deficiency","type":"exact"}],"termid":"MONDO:0013391","xrefs":{"Monarch":{"xref_id":"0013391"}}}


id: MONDO:0007512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia syndrome with distinctive facial appearance and preaxial polydactyly of feet","secondary_identifiers":["MEDGEN:342107","UMLS:C1851851","MESH:C565067","OMIM:129540"],"synonyms":[{"name":"ectodermal dysplasia syndrome with distinctive facial appearance and preaxial polydactyly of feet","type":"exact"}],"termid":"MONDO:0007512","xrefs":{"Monarch":{"xref_id":"0007512"}}}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: PBO:0069502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 769, pseudogene","termid":"PBO:0069502"}


id: PBO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 3","termid":"PBO:0045891"}


id: PBO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VI","termid":"PBO:0060340"}


id: FYPO:0005727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint occurs more slowly than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:vw","PMID:21664573","PomBase:mah","PMID:19592249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased rate of deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"delayed inactivation of the SAC","type":"broad"},{"name":"delayed inactivation of the mitotic SAC","type":"exact"},{"name":"delayed inactivation of the mitotic spindle assembly checkpoint","type":"exact"},{"name":"reduced rate of deactivation of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005727"}


id: GO:0070616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"thiamine diphosphate biosynthetic process","termid":"GO:0009229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"regulation of thiamine diphosphate biosynthetic process","synonyms":[{"name":"regulation of thiamin diphosphate biosynthetic process","type":"exact"},{"name":"regulation of thiamine diphosphate anabolism","type":"exact"},{"name":"regulation of thiamine diphosphate biosynthesis","type":"exact"},{"name":"regulation of thiamine diphosphate formation","type":"exact"},{"name":"regulation of thiamine diphosphate synthesis","type":"exact"}],"termid":"GO:0070616"}


id: PBO:0079516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYMS opposite strand RNA","termid":"PBO:0079516"}


id: SO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"probe","secondary_identifiers":["http://en.wikipedia.org/wiki/Hybridization_probe"],"termid":"SO:0000051"}


id: PBO:0108543
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0108543"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: PBO:0060479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 1","termid":"PBO:0060479"}


id: PBO:0080897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta","termid":"PBO:0080897"}


id: PBO:0062450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 117 pseudogene","termid":"PBO:0062450"}


id: MONDO:0859248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, punctiform and polychromatic pre-descemet","secondary_identifiers":["OMIM:619871","UMLS:C5676982","MEDGEN:1806182"],"termid":"MONDO:0859248","xrefs":{"Monarch":{"xref_id":"0859248"}}}


id: GO:2000766
data:
  {"annotated_genes":["SJAG_04291","SJAG_00423","SJAG_05000","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97503,101368,116872,120267],"is_not":false,"summary":null,"term":"GO:2000766"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00423":null,"SJAG_03501":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000766","terms_by_termid":{"GO:2000766":null}}


id: PBO:0065746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 1","termid":"PBO:0065746"}


id: GO:0008609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion.","definition_xrefs":["EC:2.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkylglycerone-phosphate synthase activity","secondary_identifiers":["MetaCyc:ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN","RHEA:36171","Reactome:R-HSA-390427"],"synonyms":[{"name":"1-acyl-glycerone-3-phosphate:long-chain-alcohol O-3-phospho-2-oxopropanyltransferase activity","type":"related"},{"name":"DHAP-AT","type":"related"},{"name":"alkyl DHAP synthetase activity","type":"related"},{"name":"alkyl-DHAP","type":"related"},{"name":"alkyl-DHAP synthase activity","type":"related"},{"name":"alkyldihydroxyacetone phosphate synthetase activity","type":"related"},{"name":"alkyldihydroxyacetonephosphate synthase activity","type":"related"},{"name":"dihydroxyacetone-phosphate acyltransferase activity","type":"related"}],"termid":"GO:0008609"}


id: MONDO:0024349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prevalent and benign dermatological condition that predominantly affects children and adolescents. The name \\\"pityriasis alba\\\" derives from its appearance, where \\\"pityriasis\\\" denotes the fine scales and \\\"alba\\\" signifies the pale color (hypopigmentation).","definition_xrefs":["PMID:28613715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis alba","secondary_identifiers":["UMLS:C0085657","icd11.foundation:1386947078","ICD9:696.5","MEDGEN:39322","SCTID:402296004"],"termid":"MONDO:0024349","xrefs":{"Monarch":{"xref_id":"0024349"}}}


id: PBO:0056433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 6","termid":"PBO:0056433"}


id: PBO:0043069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM3 antisense RNA 2","termid":"PBO:0043069"}


id: PBO:0069583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 857, pseudogene","termid":"PBO:0069583"}


id: MONDO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3p duplication can be de novo or inherited from a parent with a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 3","secondary_identifiers":["icd11.foundation:514472294","MEDGEN:1826042","MESH:C536811","Orphanet:262707","GARD:5343","UMLS:C5679720"],"synonyms":[{"name":"3p duplication","type":"related"},{"name":"3p trisomy","type":"related"},{"name":"Duplication 3p","type":"related"},{"name":"chromosome 3p duplication","type":"related"},{"name":"partial duplication of chromosome 3p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 3","type":"exact"},{"name":"partial trisomy 3p","type":"related"},{"name":"partial trisomy of chromosome 3p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 3","type":"exact"},{"name":"trisomy 3p","type":"related"}],"termid":"MONDO:0016940","xrefs":{"Monarch":{"xref_id":"0016940"}}}


id: GO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"positively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte mediated immunity","synonyms":[{"name":"activation of lymphocyte mediated immunity","type":"narrow"},{"name":"stimulation of lymphocyte mediated immunity","type":"narrow"},{"name":"up regulation of lymphocyte mediated immunity","type":"exact"},{"name":"up-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"upregulation of lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002708"}


id: MONDO:0011397
data:
  {"annotated_genes":["SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88643],"is_not":false,"summary":null,"term":"MONDO:0011397"}]},"cv_name":"mondo","definition":"Autosomal dominant cerebellar ataxia, deafness and narcolepsy (ADCA-DN) is a polymorphic disorder and a subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by ataxia, sensorineural deafness and narcolepsy with cataplexy and dementia.","definition_xrefs":["Orphanet:314404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia, deafness and narcolepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604121","UMLS:C3807295","GARD:12372","MEDGEN:813625","DOID:0050968"],"synonyms":[{"name":"ADCA-DN","type":"related"},{"name":"ADCA-DN syndrome","type":"exact"},{"name":"ADCADN","type":"related"},{"name":"autosomal dominant cerebellar ataxia, deafness and narcolepsy","type":"exact"},{"name":"autosomal dominant cerebellar ataxia, deafness, and narcolepsy","type":"related"},{"name":"autosomal dominant cerebellar ataxia-deafness-narcolepsy syndrome","type":"related"},{"name":"cerebellar ataxia, deafness, and narcolepsy, autosomal dominant","type":"related"}],"termid":"MONDO:0011397","terms_by_termid":{"MONDO:0011397":null},"xrefs":{"Monarch":{"xref_id":"0011397"}}}


id: PR:P50527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase shk1/pak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.14c","synonyms":[{"name":"Spom972h-shk1","type":"exact"}],"termid":"PR:P50527"}


id: GO:0102782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + epidihydrocholesterin + O2 + NADPH = (22alpha)-hydroxy-cholestanol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cholestanol hydroxylase activity (obsolete GO:0102782)","termid":"GO:0102782"}


id: GO:0010065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary meristem over time, from formation to the mature structure, as it occurs during plant embryogenesis. The primary meristem tissue is the protoderm, ground meristem and procambium.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary meristem tissue development","synonyms":[{"name":"primary meristem histogenesis","type":"exact"}],"termid":"GO:0010065"}


id: PBO:0069327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 586, pseudogene","termid":"PBO:0069327"}


id: MONDO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by recurrent TICS that may interfere with speech and other activities. Tics are sudden, rapid, nonrhythmic, stereotyped motor movements or vocalizations which may be exacerbated by stress and are generally attenuated during absorbing activities. Tic disorders are distinguished from conditions which feature other types of abnormal movements that may accompany another another condition. (From DSM-IV, 1994)","definition_xrefs":["MESH:D013981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tic disorder","secondary_identifiers":["UMLS:C2169806","ICD9:307.2","MEDGEN:853666","ICD9:307.20","DOID:2769","SCTID:568005"],"termid":"MONDO:0002420","xrefs":{"Monarch":{"xref_id":"0002420"}}}


id: MONDO:0006154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue that arises from the colon.","definition_xrefs":["NCIT:C5498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon lymphoma","termid":"MONDO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005570"],"is_obsolete":false,"name":"colon mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["MEDGEN:272492","EFO:1000186","UMLS:C1333096"],"synonyms":[{"name":"MALT lymphoma of colon","type":"exact"},{"name":"MALT lymphoma of the colon","type":"exact"},{"name":"MALToma of colon","type":"exact"},{"name":"MALToma of the colon","type":"exact"},{"name":"colon MALT lymphoma","type":"exact"},{"name":"colon MALToma","type":"exact"},{"name":"colonic MALT lymphoma","type":"exact"},{"name":"colonic MALToma","type":"exact"},{"name":"colonic mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006154","xrefs":{"Monarch":{"xref_id":"0006154"}}}


id: PBO:0117123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM29 antisense RNA 1","termid":"PBO:0117123"}


id: MONDO:0003835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the cardia of stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cardia carcinoma","termid":"MONDO:0003834"},{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric cardia adenocarcinoma","secondary_identifiers":["NCIT:C5247","UMLS:C1333762","MEDGEN:232543","DOID:6271"],"synonyms":[{"name":"adenocarcinoma of cardia of stomach","type":"exact"},{"name":"adenocarcinoma of gastric cardia","type":"related"},{"name":"adenocarcinoma of the cardia of the stomach","type":"exact"},{"name":"adenocarcinoma of the gastric cardia","type":"exact"},{"name":"cardia of stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0003835","xrefs":{"Monarch":{"xref_id":"0003835"}}}


id: PBO:0074014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 5","termid":"PBO:0074014"}


id: PBO:0049263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin B","termid":"PBO:0049263"}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: GO:0006298
data:
  {"annotated_genes":["SJAG_01419","SJAG_02187","SJAG_04190","SJAG_04410","SJAG_01807","SJAG_02748","SJAG_01262","SJAG_01832","SJAG_01887","SJAG_03722","SJAG_02226","SJAG_01620","SJAG_01049","SJAG_02261","SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65767,71581,72957,73174,73915,74379,74424,75329,75335,107908,117706,118275],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[58086,109725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[100044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.","definition_xrefs":["PMID:11687886","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_01832":null,"SJAG_01887":null,"SJAG_02039":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02261":null,"SJAG_02748":null,"SJAG_03722":null,"SJAG_04190":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"mismatch repair","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006300","Reactome:R-HSA-5358508","Wikipedia:DNA_mismatch_repair"],"synonyms":[{"name":"MMR","type":"exact"},{"name":"MutS/MutL/MutH pathway","type":"related"},{"name":"long patch mismatch repair system","type":"narrow"},{"name":"mismatch repair, MutL-like pathway","type":"related"}],"termid":"GO:0006298","terms_by_termid":{"GO:0000710":null,"GO:0006298":null,"GO:1990516":null}}


id: PR:Q10272
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein crb3/ipi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.08c","secondary_identifiers":["UniProtKB:Q10272"],"synonyms":[{"name":"Spom972h-WDR18","type":"exact"}],"termid":"PR:Q10272"}


id: MONDO:0020537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Occupational allergic alveolitis designates a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her occupational environment. Symptoms vary depending on the antigen and the form (acute, subacute, chronic) of the disease. They may be cough, dyspnea, chills, fever, weight loss, loss of appetite and general malaise","definition_xrefs":["Orphanet:99909"],"gene_count":0,"genotype_count":0,"name":"obsolete occupational allergic alveolitis (obsolete MONDO:0020537)","termid":"MONDO:0020537","xrefs":{"Monarch":{"xref_id":"0020537"}}}


id: MOD:01281
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:118#S","PubMed:16335955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EDT-iodo-PEO-biotin","termid":"MOD:00490"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin - site S","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:01281"}


id: PBO:0081110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A pseudogene 1","termid":"PBO:0081110"}


id: GO:0048363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectin component of mucilage.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"},{"relation_name":"part_of","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mucilage pectin metabolic process","synonyms":[{"name":"mucilage pectin metabolism","type":"exact"}],"termid":"GO:0048363"}


id: GO:1903182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of SUMO transferase activity (obsolete GO:1903182)","synonyms":[{"name":"regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903182"}


id: PBO:0053476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 446","termid":"PBO:0053476"}


id: GO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-tryptophan, to form peptidyl-L-6'-bromotryptophan.","definition_xrefs":["RESID:AA0179"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan bromination (obsolete GO:0018080)","termid":"GO:0018080"}


id: PBO:0073408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 11","termid":"PBO:0073408"}


id: PR:O13931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit J, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.11","synonyms":[{"name":"Spom972h-atp18","type":"exact"}],"termid":"PR:O13931"}


id: MONDO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant tumor that originates from the surface epithelium of the ovary. It is composed of epithelial cells and stroma. Representative examples of benign tumors include serous cystadenoma, mucinous cystadenoma, and benign Brenner tumor. Representative examples of borderline tumors include serous surface papillary tumor, mucinous adenofibroma, and borderline Brenner tumor. Representative examples of malignant tumors include serous adenocarcinoma, mucinous adenocarcinoma, endometrioid adenocarcinoma, and malignant Brenner tumor.","definition_xrefs":["NCIT:C4381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian epithelial tumor","secondary_identifiers":["SCTID:237057005","DOID:2152","ONCOTREE:OVT","MEDGEN:90969","UMLS:C0341823","ICD9:239.5"],"synonyms":[{"name":"OVT","type":"related"},{"name":"epithelial neoplasm of ovary","type":"exact"},{"name":"epithelial neoplasm of the ovary","type":"exact"},{"name":"epithelial tumor of ovary","type":"exact"},{"name":"epithelial tumor of the ovary","type":"exact"},{"name":"epithelial tumour of ovary","type":"exact"},{"name":"epithelial tumour of the ovary","type":"exact"},{"name":"ovarian epithelial tumor","type":"exact"},{"name":"ovarian surface epithelial-stromal tumor","type":"exact"},{"name":"ovarian surface epithelial-stromal tumour","type":"exact"},{"name":"ovarian surface-epithelial stromal neoplasm","type":"exact"},{"name":"ovary epithelial cancer","type":"related"},{"name":"ovary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0002229","xrefs":{"Monarch":{"xref_id":"0002229"}}}


id: PBO:0073377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 1","termid":"PBO:0073377"}


id: PBO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER1L6 antisense RNA 1","termid":"PBO:0047506"}


id: PBO:0027385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_mitotic_spindle","termid":"PBO:0027385"}


id: PBO:0049944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 2","termid":"PBO:0049944"}


id: PBO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 10","termid":"PBO:0072133"}


id: PBO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2B","termid":"PBO:0043027"}


id: GO:1900671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of F-9775A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775A biosynthetic process","termid":"GO:1900670"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"negatively_regulates","term_name":"F-9775A biosynthetic process","termid":"GO:1900611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of F-9775A biosynthetic process","synonyms":[{"name":"down regulation of F-9775A anabolism","type":"exact"},{"name":"down regulation of F-9775A biosynthesis","type":"exact"},{"name":"down regulation of F-9775A biosynthetic process","type":"exact"},{"name":"down regulation of F-9775A formation","type":"exact"},{"name":"down regulation of F-9775A synthesis","type":"exact"},{"name":"down-regulation of F-9775A anabolism","type":"exact"},{"name":"down-regulation of F-9775A biosynthesis","type":"exact"},{"name":"down-regulation of F-9775A biosynthetic process","type":"exact"},{"name":"down-regulation of F-9775A formation","type":"exact"},{"name":"down-regulation of F-9775A synthesis","type":"exact"},{"name":"downregulation of F-9775A anabolism","type":"exact"},{"name":"downregulation of F-9775A biosynthesis","type":"exact"},{"name":"downregulation of F-9775A biosynthetic process","type":"exact"},{"name":"downregulation of F-9775A formation","type":"exact"},{"name":"downregulation of F-9775A synthesis","type":"exact"},{"name":"inhibition of F-9775A anabolism","type":"exact"},{"name":"inhibition of F-9775A biosynthesis","type":"exact"},{"name":"inhibition of F-9775A biosynthetic process","type":"narrow"},{"name":"inhibition of F-9775A formation","type":"exact"},{"name":"inhibition of F-9775A synthesis","type":"exact"},{"name":"negative regulation of F-9775A anabolism","type":"exact"},{"name":"negative regulation of F-9775A biosynthesis","type":"exact"},{"name":"negative regulation of F-9775A formation","type":"exact"},{"name":"negative regulation of F-9775A synthesis","type":"exact"}],"termid":"GO:1900671"}


id: PBO:0082735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for its structural integrity and catalytic activity, involved in transcriptional silencing and required for sporulation; relocalizes to the cytosol in response to hypoxia; cells defective in SDS3 display pleiotropic phenotypes","termid":"PBO:0082735"}


id: GO:1990399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed epithelium.","definition_xrefs":["GOC:sl","PMID:19845688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium regeneration","synonyms":[{"name":"regeneration of epithelium","type":"exact"}],"termid":"GO:1990399"}


id: PBO:0077582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 1","termid":"PBO:0077582"}


id: MONDO:0024277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia","termid":"MONDO:0002049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"neonatal thrombocytopenia","secondary_identifiers":["MEDGEN:526130","MESH:D054098","SCTID:82835005","UMLS:C0221028"],"synonyms":[{"name":"neonatal purpura","type":"related"},{"name":"neonatal thrombocytopenia","type":"exact"},{"name":"purpura of newborn","type":"related"}],"termid":"MONDO:0024277","xrefs":{"Monarch":{"xref_id":"0024277"}}}


id: MONDO:0018790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease with hemorrhagic tendency (obsolete MONDO:0018790)","secondary_identifiers":["Orphanet:477765"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy with hemorrhagic tendency","type":"exact"}],"termid":"MONDO:0018790","xrefs":{"Monarch":{"xref_id":"0018790"}}}


id: GO:0140582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by extracellular cAMP binding to its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9578623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway","synonyms":[{"name":"extracellular cAMP signaling pathway","type":"exact"}],"termid":"GO:0140582"}


id: MONDO:0800348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 53","secondary_identifiers":["MEDGEN:461558","UMLS:C3150208"],"synonyms":[{"name":"RP53","type":"exact"}],"termid":"MONDO:0800348","xrefs":{"Monarch":{"xref_id":"0800348"}}}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["RHEA:21656","EC:5.1.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["MetaCyc:RXN-9160","KEGG_REACTION:R04266"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: PBO:0064341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin domain containing 1","termid":"PBO:0064341"}


id: FYPO:0005349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body (SPB) moves rapidly back and forth to a greater extent and over a larger area than normal, causing increased chromosome movement. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PMID:12390246","PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"increased SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"increased mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"increased mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"increased mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005349"}


id: PBO:0075633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2C (pseudogene)","termid":"PBO:0075633"}


id: FYPO:0008091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated rRNA measured in a cell is higher than normal.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}


id: PBO:0048675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLCCI1 divergent transcript","termid":"PBO:0048675"}


id: MONDO:0021421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carcinoid tumors, intestina (obsolete MONDO:0021421)","termid":"MONDO:0021421","xrefs":{"Monarch":{"xref_id":"0021421"}}}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: PBO:0062929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 2","termid":"PBO:0062929"}


id: MONDO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 69","secondary_identifiers":["DOID:0070568","MEDGEN:1811285","UMLS:C5676960","OMIM:619826"],"synonyms":[{"name":"SPGF69","type":"exact"},{"name":"spermatogenic failure 69","type":"exact"}],"termid":"MONDO:0030732","xrefs":{"Monarch":{"xref_id":"0030732"}}}


id: PBO:0057191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 363","termid":"PBO:0057191"}


id: PBO:0087203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine uroporphyrinogen III transmethylase; involved in the biosynthesis of siroheme, a prosthetic group used by sulfite reductase; required for sulfate assimilation and methionine biosynthesis","termid":"PBO:0087203"}


id: MONDO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herpes zoster but without eruption of vesicles. Patients exhibit the characteristic pain minus the skin rash, sometimes making diagnosis difficult.","definition_xrefs":["MESH:D031368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes zoster","termid":"MONDO:0005609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"zoster sine herpete","secondary_identifiers":["UMLS:C1135841","SCTID:449783002","MEDGEN:253902"],"synonyms":[{"name":"Zoster sine Eruptione","type":"related"},{"name":"zoster sine herpete","type":"exact"}],"termid":"MONDO:0043988","xrefs":{"Monarch":{"xref_id":"0043988"}}}


id: GO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isobutyryl-CoA = butanoyl-CoA.","definition_xrefs":["RHEA:13141","EC:5.4.99.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isobutyryl-CoA mutase activity","secondary_identifiers":["KEGG_REACTION:R01181","MetaCyc:ISOBUTYRYL-COA-MUTASE-RXN"],"synonyms":[{"name":"2-methylpropanoyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"butyryl-CoA:isobutyryl-CoA mutase activity","type":"related"},{"name":"isobutyryl coenzyme A mutase activity","type":"related"}],"termid":"GO:0047727"}


id: PBO:0056738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase type 1D, mitochondrial","termid":"PBO:0056738"}


id: PBO:0090644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim15","termid":"PBO:0090644"}


id: PBO:0042870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 100","termid":"PBO:0042870"}


id: MONDO:0010789
data:
  {"annotated_genes":["SJAG_MIT03","SJAG_MIT20","SJAG_MIT04","SJAG_MIT13"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87987,87988,87989,87990],"is_not":false,"summary":null,"term":"MONDO:0010789"}]},"cv_name":"mondo","definition":"MELAS (Mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke) syndrome is a rare progressive multisystemic disorder characterized by encephalomyopathy, lactic acidosis, and stroke-like episodes. Other features include endocrinopathy, heart disease, diabetes, hearing loss, and neurological and psychiatric manifestations.","definition_xrefs":["Orphanet:550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"}],"gene_count":4,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200525","DOID:3687","MESH:D017241","NANDO:1200176","NCIT:C84885","ICD10CM:E88.41","SCTID:39925003","ICD9:277.87","MEDGEN:56485","UMLS:C0162671","OMIM:540000","MedDRA:10053872","GARD:7009"],"synonyms":[{"name":"MELAS","type":"related"},{"name":"MELAS syndrome","type":"exact"},{"name":"mitochondrial encephalomyopathy lactic acidosis and stroke-like episodes","type":"related"},{"name":"mitochondrial encephalomyopathy, lactic acidosis and stroke","type":"exact"},{"name":"mitochondrial encephalomyopathy, lactic acidosis and stroke-like episodes","type":"exact"},{"name":"mitochondrial myopathy, encephalopathy, lactic acidosis and stroke-like episodes","type":"exact"},{"name":"mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke-like episodes","type":"exact"}],"termid":"MONDO:0010789","terms_by_termid":{"MONDO:0010789":null},"xrefs":{"Monarch":{"xref_id":"0010789"}}}


id: GO:1902670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to carbon dioxide.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:15491402","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carbon dioxide binding","synonyms":[{"name":"CO2 binding","type":"exact"}],"termid":"GO:1902670"}


id: PBO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 2","termid":"PBO:0072125"}


id: PR:P17477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.13c","synonyms":[{"name":"A3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp102","type":"exact"}],"termid":"PR:P17477"}


id: GO:0036242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the 2-oxoglutarate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process to succinate via 2-oxoglutarate-dependent GABA-transaminase activity (obsolete GO:0036242)","termid":"GO:0036242"}


id: FYPO:0006500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which disassembly of the cell wall at the site of cell-cell fusion during mating begins earlier than normal, e.g. before pairing with a partner cell. Premature cell wall breakdown often results in cell lysis.","definition_xrefs":["PomBase:mah","PMID:29453312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall disassembly at cell fusion site","termid":"FYPO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000301","FYPO:0004805"],"is_obsolete":false,"name":"premature cell wall disassembly at cell fusion site","synonyms":[{"name":"advanced cell wall disassembly at cell fusion site","type":"exact"},{"name":"premature cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"premature cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"premature cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"premature cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"premature fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"premature fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0006500"}


id: PBO:0085718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP","termid":"PBO:0085718"}


id: MONDO:0004564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anatomic abnormality of the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid malformation","secondary_identifiers":["DOID:8433","NCIT:C27331","UMLS:C0877367","MEDGEN:209098"],"synonyms":[{"name":"thyroid gland malformation","type":"exact"}],"termid":"MONDO:0004564","xrefs":{"Monarch":{"xref_id":"0004564"}}}


id: MONDO:0016619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive disorder characterized by developmental abnormalities of the skin, sweat glands, hair and nails. Patients have a reduced ability to sweat. Other signs and symptoms include hypotrichosis and teeth malformations.","definition_xrefs":["NCIT:C84580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive hypohidrotic ectodermal dysplasia","secondary_identifiers":["Orphanet:248","UMLS:C0406702","icd11.foundation:7083042","GARD:2057","MEDGEN:96067","MESH:D053360","SCTID:27025001"],"synonyms":[{"name":"AR-HED","type":"exact"},{"name":"anhidrotic ectodermal dysplasia, autosomal recessive","type":"related"},{"name":"autosomal recessive anhidrotic ectodermal dysplasia","type":"exact"},{"name":"hypohidrotic ectodermal dysplasia autosomal recessive","type":"related"},{"name":"hypohidrotic ectodermal dysplasia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016619","xrefs":{"Monarch":{"xref_id":"0016619"}}}


id: GO:1990428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["GO:jl","PMID:24356509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"miRNA transport","synonyms":[{"name":"microRNA transport","type":"exact"}],"termid":"GO:1990428"}


id: PBO:0056231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI1 antisense RNA 1","termid":"PBO:0056231"}


id: PBO:0043030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4A","termid":"PBO:0043030"}


id: PBO:0059218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 1","termid":"PBO:0059218"}


id: MONDO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of frontal sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal sinusitis","termid":"MONDO:0001121"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute frontal sinusitis","secondary_identifiers":["DOID:14225","ICD10CM:J01.1","ICD9:461.1","SCTID:91038008","MEDGEN:510087","icd11.foundation:86893536","UMLS:C0155805"],"synonyms":[{"name":"frontal sinusitis, acute","type":"exact"}],"termid":"MONDO:0001912","xrefs":{"Monarch":{"xref_id":"0001912"}}}


id: PBO:0058213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4505","termid":"PBO:0058213"}


id: GO:0035709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a memory T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["CL:0000813","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell activation","termid":"GO:0035709"}


id: MONDO:0100296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Olmsted syndrome in which the cause of the disease is a variation in the TRPV3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Olmsted syndrome","termid":"MONDO:0031421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome 1","secondary_identifiers":["GARD:15818","MEDGEN:1778121","DOID:0112013","OMIM:614594","UMLS:C5542829"],"synonyms":[{"name":"Olmsted syndrome","type":"broad"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques 1","type":"exact"}],"termid":"MONDO:0100296","xrefs":{"Monarch":{"xref_id":"0100296"}}}


