# terms

id: MONDO:0958013
data:
  {"annotated_genes":["SJAG_02208","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87937,87938],"is_not":false,"summary":null,"term":"MONDO:0958013"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"},{"relation_name":"is_a","term_name":"SEC61A1 deficiency","termid":"MONDO:0100337"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882741","MEDGEN:1847802","OMIM:620670"],"termid":"MONDO:0958013","terms_by_termid":{"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0958013"}}}


id: PR:O74789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 4 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11668:SF22","OMA:SCHPO03924","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase C26H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.05c","secondary_identifiers":["UniProtKB:O74789"],"synonyms":[{"name":"Spom972h-PPP4C","type":"exact"}],"termid":"PR:O74789"}


id: GO:1901144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of insulin.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin biosynthetic process (obsolete GO:1901144)","synonyms":[{"name":"insulin anabolism","type":"exact"},{"name":"insulin biosynthesis","type":"exact"},{"name":"insulin biosynthetic process","type":"exact"},{"name":"insulin formation","type":"exact"},{"name":"insulin synthesis","type":"exact"}],"termid":"GO:1901144"}


id: GO:1901795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["PMID:10537203","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"3-(3-hydroxyphenyl)propanoate metabolic process","termid":"GO:1901793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate biosynthetic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate anabolism","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate biosynthesis","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate formation","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate synthesis","type":"exact"}],"termid":"GO:1901795"}


id: FYPO:0002866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tryptone. Cells stop growing (and may die) at a concentration of tryptone that allows wild type cells to grow. Tryptone is a mixture of peptides produced by digestion of casein with trypsin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tryptone","synonyms":[{"name":"hypersensitive to tryptone","type":"exact"},{"name":"sensitive to tryptone during mitotic cell cycle","type":"related"},{"name":"sensitive to tryptone during vegetative growth","type":"exact"}],"termid":"FYPO:0002866"}


id: PBO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity-regulating kinase Kin1","termid":"PBO:0004162"}


id: PBO:0088962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family","termid":"PBO:0088962"}


id: PBO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual serine/threonine and tyrosine protein kinase","termid":"PBO:0045514"}


id: PBO:0079705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 1","termid":"PBO:0079705"}


id: PBO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial splicing suppressor Mss51 (predicted)","termid":"PBO:0002396"}


id: PBO:0082695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; conserved coiled-coil protein involved in chromosome segregation, spindle checkpoint activity, and kinetochore assembly and clustering; evolutionarily conserved; complex members include Ndc80p, Nuf2p, Scp24p, and Spc25p; modified by sumoylation","termid":"PBO:0082695"}


id: MONDO:0043555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diarrhea occurring in infants from newborn to 24-months old.","definition_xrefs":["MESH:D003968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"infantile diarrhea","secondary_identifiers":["SCTID:39963006","UMLS:C0011992","MEDGEN:8361"],"synonyms":[{"name":"Diarrheas, infantile","type":"related"},{"name":"diarrheal disease of infancy","type":"exact"},{"name":"infantile Diarrheas","type":"related"},{"name":"infantile diarrhea","type":"exact"},{"name":"infantile diarrheal disease","type":"exact"},{"name":"infantile onset diarrheal disease","type":"exact"},{"name":"toddler diarrhea","type":"exact"},{"name":"toddler diarrhoea","type":"exact"}],"termid":"MONDO:0043555","xrefs":{"Monarch":{"xref_id":"0043555"}}}


id: GO:0047381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dodecanoyl-[ACP] + H2O = dodecanoate + H+ + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dodecanoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0047381)","synonyms":[{"name":"dodecanoyl-ACP hydrolase activity","type":"exact"},{"name":"dodecanoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"lauroyl-ACP hydrolase activity","type":"exact"},{"name":"lauroyl-[acyl-carrier-protein] hydrolase activity","type":"exact"}],"termid":"GO:0047381"}


id: PBO:0045122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C2","termid":"PBO:0045122"}


id: PBO:0091281
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HydroxyUrea Sensitive","termid":"PBO:0091281"}


id: GO:0050850
data:
  {"annotated_genes":["SJAG_04551","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104091,112978],"is_not":false,"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01181":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium-mediated signaling","type":"narrow"},{"name":"positive regulation of calcium-mediated signalling","type":"exact"},{"name":"stimulation of calcium-mediated signaling","type":"narrow"},{"name":"up regulation of calcium-mediated signaling","type":"exact"},{"name":"up-regulation of calcium-mediated signaling","type":"exact"},{"name":"upregulation of calcium-mediated signaling","type":"exact"}],"termid":"GO:0050850","terms_by_termid":{"GO:0050850":null}}


id: GO:0016144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-glycoside biosynthetic process","synonyms":[{"name":"S-glycoside anabolism","type":"exact"},{"name":"S-glycoside biosynthesis","type":"exact"},{"name":"S-glycoside formation","type":"exact"},{"name":"S-glycoside synthesis","type":"exact"},{"name":"thioglycoside biosynthesis","type":"exact"},{"name":"thioglycoside biosynthetic process","type":"exact"}],"termid":"GO:0016144"}


id: GO:2001314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process","termid":"GO:2001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolic process","synonyms":[{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose breakdown","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolism","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose degradation","type":"exact"}],"termid":"GO:2001314"}


id: PBO:0005259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial isoleucine-tRNA ligase (predicted)","termid":"PBO:0005259"}


id: GO:1900023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of D-erythro-sphingosine kinase activity (obsolete GO:1900023)","synonyms":[{"name":"positive regulation of sphingosine kinase activity","type":"exact"},{"name":"up regulation of D-erythro-sphingosine kinase activity","type":"related"},{"name":"up regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900023"}


id: MONDO:0020485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic non-dystrophic myopathy characterized by the triad of congenital myopathy, dysmorphic features and susceptibility to malignant hyperthermia. Patients present with a wide phenotypic range, including delayed motor development, muscle weakness and fatigability, ptosis and facies myopathica (with or without creatine kinase elevations), skeletal abnormalities (e.g. short stature, scoliosis, kyphosis, lumbar lordosis and pectus carinatum/excavatum), mild dysmorphic facial features (e.g. hypertelorism, down-slanting palpebral fissures, epicanthic folds, low set ears, micrognathia), webbing of the neck, cryptorchidism, and a susceptibility to malignant hyperthermia and/or rhabdomyolysis due to intensive physical strain, viral infection or statin use.","definition_xrefs":["Orphanet:99741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"King-Denborough syndrome","secondary_identifiers":["GARD:8433","MESH:C537504","MESH:C536883","OMIM:619542","SCTID:764957003","MEDGEN:327082","UMLS:C1840365"],"synonyms":[{"name":"King Denborough syndrome","type":"related"},{"name":"Koussef-Nichols syndrome","type":"exact"},{"name":"Kousseff Nichols syndrome","type":"related"},{"name":"Noonan like contracture myopathy hyperpyrexia","type":"related"},{"name":"anesthetic-induced malignant hyperpyrexia in children","type":"related"}],"termid":"MONDO:0020485","xrefs":{"Monarch":{"xref_id":"0020485"}}}


id: MONDO:0700184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A T-cell leukemia in which there is a persistent increase in the number of large granular lymphocytes in the peripheral blood and occurring in a cat.","definition_xrefs":["NCIT:C135724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline large granular lymphocyte lymphoma","termid":"MONDO:0700184","xrefs":{"Monarch":{"xref_id":"0700184"}}}


id: PBO:0015658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear 3'-tRNA processing endonuclease tRNAse Z, Trz1","termid":"PBO:0015658"}


id: GO:0006867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of asparagine, alpha-aminosuccinamic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"asparagine transport","synonyms":[{"name":"L-asparagine transport","type":"narrow"}],"termid":"GO:0006867"}


id: GO:0090403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-induced premature senescence","termid":"GO:0090400"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative stress-induced premature senescence","termid":"GO:0090403"}


id: MONDO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute pericementitis","termid":"MONDO:0001028"},{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute apical periodontitis","secondary_identifiers":["ICD10CM:K04.4","ICD9:522.4","MEDGEN:901807","SCTID:718053009","DOID:11693","UMLS:C4084770"],"synonyms":[{"name":"acute apical periodontitis of pulpal origin","type":"exact"}],"termid":"MONDO:0001338","xrefs":{"Monarch":{"xref_id":"0001338"}}}


id: PBO:0029645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_at_high_temperature_(obsolete_FYPO:0002075)","termid":"PBO:0029645"}


id: MONDO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant soft tissue neoplasm arising exclusively from the synovial membrane. Examples include the diffuse giant cell tumor of tendon sheath, localized giant cell tumor of tendon sheath, and malignant giant cell tumor of tendon sheath.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"},{"relation_name":"is_a","term_name":"synovium disorder","termid":"MONDO:0056799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovium neoplasm","secondary_identifiers":["NCIT:C8964","DOID:315","UMLS:C0476203","MEDGEN:99197"],"synonyms":[{"name":"neoplasm of synovial membrane of synovial joint","type":"exact"},{"name":"neoplasm of synovium","type":"exact"},{"name":"neoplasm of the synovium","type":"exact"},{"name":"synovial membrane of synovial joint neoplasm","type":"exact"},{"name":"synovial membrane of synovial joint neoplasm (disease)","type":"exact"},{"name":"synovial membrane of synovial joint tumor","type":"exact"},{"name":"synovial membrane of synovial joint tumour","type":"exact"},{"name":"synovial neoplasm","type":"exact"},{"name":"synovial neoplasm (morphologic abnormality)","type":"exact"},{"name":"synovial neoplasm NOS (morphologic abnormality)","type":"exact"},{"name":"synovial tumor","type":"exact"},{"name":"synovial tumour","type":"exact"},{"name":"tumor of synovial membrane of synovial joint","type":"exact"},{"name":"tumor of synovium","type":"exact"},{"name":"tumor of the synovium","type":"exact"},{"name":"tumour of synovial membrane of synovial joint","type":"exact"},{"name":"tumour of synovium","type":"exact"},{"name":"tumour of the synovium","type":"exact"}],"termid":"MONDO:0002528","xrefs":{"Monarch":{"xref_id":"0002528"}}}


id: GO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","PMID:10375501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bergmann glial cell differentiation","termid":"GO:0060020"}


id: PBO:0087638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; PtdIns[4,5]P2-binding protein that localizes to exocytic sites in an actin-independent manner, targeting and anchoring the exocyst with Sec3p; involved in exocyst assembly; direct downstream effector of Rho3p and Cdc42p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0087638"}


id: GO:1901569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid derivative catabolic process","synonyms":[{"name":"fatty acid derivative breakdown","type":"exact"},{"name":"fatty acid derivative catabolism","type":"exact"},{"name":"fatty acid derivative degradation","type":"exact"}],"termid":"GO:1901569"}


id: MONDO:0003749
data:
  {"annotated_genes":["SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013662"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the esophagus. Representative examples of non-neoplastic disorders include esophagitis and esophageal ulcer. Representative examples of neoplastic disorders include carcinomas, lymphomas, and melanomas.","definition_xrefs":["NCIT:C3027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"upper digestive tract disorder","termid":"MONDO:0044991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03106":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:530.9","ICD9:530.2","MESH:D004935","SCTID:30811009","ICD9:530.20","SCTID:37657006","UMLS:C0014852","MEDGEN:8693","DOID:6050","EFO:0009544","ICD9:530"],"synonyms":[{"name":"disease of esophagus","type":"exact"},{"name":"disease of oesophagus","type":"exact"},{"name":"disease or disorder of esophagus","type":"exact"},{"name":"disease or disorder of oesophagus","type":"exact"},{"name":"disorder of esophagus","type":"exact"},{"name":"disorder of oesophagus","type":"exact"},{"name":"esophageal disorder","type":"exact"},{"name":"esophageal ulcer","type":"narrow"},{"name":"esophagus disease","type":"exact"},{"name":"esophagus disease or disorder","type":"exact"},{"name":"oesophagus disease","type":"exact"},{"name":"oesophagus disease or disorder","type":"exact"}],"termid":"MONDO:0003749","terms_by_termid":{"MONDO:0013662":null},"xrefs":{"Monarch":{"xref_id":"0003749"}}}


id: PBO:0078917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 6-1","termid":"PBO:0078917"}


id: MONDO:0100292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Carey-Fineman-Ziter syndrome in which the cause of the disease is a mutation in the MYMX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carey-Fineman-Ziter syndrome","termid":"MONDO:0031415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carey-Fineman-Ziter syndrome 2","secondary_identifiers":["OMIM:619941","UMLS:C5677012","MEDGEN:1800921"],"synonyms":[{"name":"CFZS2","type":"exact"}],"termid":"MONDO:0100292","xrefs":{"Monarch":{"xref_id":"0100292"}}}


id: MONDO:0005685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bullous pemphigoid (obsolete MONDO:0005685)","termid":"MONDO:0005685","xrefs":{"Monarch":{"xref_id":"0005685"}}}


id: MONDO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatic veno-occlusive disease (obsolete MONDO:0000887)","termid":"MONDO:0000887","xrefs":{"Monarch":{"xref_id":"0000887"}}}


id: PBO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 like 1","termid":"PBO:0060670"}


id: PBO:0039072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 4","termid":"PBO:0039072"}


id: MONDO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bilirubin, serum level of, quantitative trait locus 1 (obsolete MONDO:0044270)","secondary_identifiers":["OMIM:601816"],"synonyms":[{"name":"BILIQTL1","type":"related"},{"name":"bilirubin, serum level OF, quantitative trait locus 1","type":"related"},{"name":"bilirubin, serum level of, QTL1","type":"exact"}],"termid":"MONDO:0044270","xrefs":{"Monarch":{"xref_id":"0044270"}}}


id: PBO:0056706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotransferrin","termid":"PBO:0056706"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["RHEA:16661","MetaCyc:2.5.1.63-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: PBO:0048897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 19","termid":"PBO:0048897"}


id: GO:0071446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salicylic acid","termid":"GO:0009751"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salicylic acid stimulus","synonyms":[{"name":"cellular response to salicylate stimulus","type":"exact"}],"termid":"GO:0071446"}


id: MONDO:0014183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 23, autosomal recessive","secondary_identifiers":["UMLS:C3809482","GARD:18198","OMIM:615431","MEDGEN:815812"],"synonyms":[{"name":"MYP23","type":"related"},{"name":"myopia 23, autosomal recessive","type":"exact"}],"termid":"MONDO:0014183","xrefs":{"Monarch":{"xref_id":"0014183"}}}


id: PR:Q9USV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor cbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.14","synonyms":[{"name":"Spom972h-SPBC27B12.14","type":"exact"},{"name":"cytochrome b mRNA-processing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV6"}


id: MONDO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by cerebellar ataxia, cytopenias and predisposition to bone marrow failure and myeloid leukemia. Neurologic features variably include slowly progressive cerebellar ataxia or balance impairment with cerebellar atrophy and periventricular white matter T2 hyperintensities in brain MRI, horizontal and vertical nystagmus, dysmetria, dysarthria, pyramidal tract signs and reduced nerve conduction velocity. Hematological abnormalities are variable and may be intermittent and include cytopenias of all cell lineages, immunodeficiency, myelodysplasia and acute myeloid leukemia.","definition_xrefs":["Orphanet:2585"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of medulla oblongata (obsolete MONDO:0015141)","termid":"MONDO:0015141"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"ataxia-pancytopenia syndrome","secondary_identifiers":["SCTID:768556005","NCIT:C176909","ICD10CM:D61.0","GARD:3865","MEDGEN:230896","OMIM:159550","UMLS:C1327919","MESH:C563233"],"synonyms":[{"name":"ATXPC","type":"related"},{"name":"ataxia-pancytopenia syndrome","type":"exact"},{"name":"myelocerebellar disorder","type":"exact"}],"termid":"MONDO:0008038","xrefs":{"Monarch":{"xref_id":"0008038"}}}


id: PBO:0067126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 172, pseudogene","termid":"PBO:0067126"}


id: PBO:0014583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-containing RNAs endoribonuclease (predicted)","termid":"PBO:0014583"}


id: MONDO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 95","secondary_identifiers":["UMLS:C2678034","MEDGEN:394715","GARD:22684","OMIM:300716","MESH:C567470"],"synonyms":[{"name":"MRX95","type":"exact"},{"name":"intellectual disability, X-linked 95","type":"exact"},{"name":"mental retardation, X-linked 95","type":"related"},{"name":"mental retardation, X-linked 95, X-linked dominant","type":"exact"}],"termid":"MONDO:0010413","xrefs":{"Monarch":{"xref_id":"0010413"}}}


id: PBO:0090475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1","termid":"PBO:0090475"}


id: MONDO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant trophoblastic tumor that arises from the ovary as a result of ectopic ovarian pregnancy. There is no germ cell component present.","definition_xrefs":["NCIT:C40442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of ovary","termid":"MONDO:0003507"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gestational ovarian choriocarcinoma","secondary_identifiers":["MEDGEN:274586","UMLS:C1517538","DOID:7591"],"synonyms":[{"name":"gestational ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0004294","xrefs":{"Monarch":{"xref_id":"0004294"}}}


id: GO:0031322
data:
  {"annotated_genes":["SJAG_00486","SJAG_04271","SJAG_05309","SJAG_02529","SJAG_04010","SJAG_02248","SJAG_00405","SJAG_04901","SJAG_01483","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94183,98793,99478,101766,101767,104867,106078,108805,109691,115946],"is_not":false,"summary":null,"term":"GO:0031322"}]},"cv_name":"biological_process","definition":"A spindle pole body (SPB) organization process that takes place during the second meiotic division during ascospore formation and results in the structural reorganization of the SPB; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00486":null,"SJAG_01483":null,"SJAG_02248":null,"SJAG_02529":null,"SJAG_03746":null,"SJAG_04010":null,"SJAG_04271":null,"SJAG_04901":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0030437","GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"ascospore-type prospore-specific spindle pole body remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore-specific spindle pole body modification","type":"related"},{"name":"ascospore-type prospore-specific spindle pole body remodelling","type":"exact"},{"name":"forespore specific spindle pole body remodeling","type":"exact"},{"name":"forespore-specific spindle pole body remodeling","type":"exact"},{"name":"prospore-specific spindle pole body remodeling","type":"exact"},{"name":"sporulation-specific spindle pole body remodeling","type":"exact"}],"termid":"GO:0031322","terms_by_termid":{"GO:0031322":null}}


id: PR:P0CT36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-3 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.03c","synonyms":[{"name":"Spom972h-Tf2-3","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT36"}


id: GO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon regeneration.","definition_xrefs":["GOC:dph","GOC:jid","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"positive regulation of neuron projection regeneration","termid":"GO:0070572"},{"relation_name":"is_a","term_name":"positive regulation of response to wounding","termid":"GO:1903036"},{"relation_name":"positively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon regeneration","synonyms":[{"name":"activation of axon regeneration","type":"narrow"},{"name":"stimulation of axon regeneration","type":"narrow"},{"name":"up regulation of axon regeneration","type":"exact"},{"name":"up-regulation of axon regeneration","type":"exact"},{"name":"upregulation of axon regeneration","type":"exact"}],"termid":"GO:0048680"}


id: MONDO:0003460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of glandular structures which contain clear cells and a fibrotic stroma.","definition_xrefs":["NCIT:C8987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell adenofibroma","secondary_identifiers":["DOID:5477","ICDO:8313/0","MESH:D062625","NCIT:C8985","UMLS:C0334317","MEDGEN:90762"],"synonyms":[{"name":"clear cell adenofibroma","type":"exact"},{"name":"clear cell adenofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003460","xrefs":{"Monarch":{"xref_id":"0003460"}}}


id: MONDO:0019936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare otorhinolaryngological malformation (obsolete MONDO:0019936)","secondary_identifiers":["Orphanet:96333"],"termid":"MONDO:0019936","xrefs":{"Monarch":{"xref_id":"0019936"}}}


id: PBO:0053379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 305","termid":"PBO:0053379"}


id: PATO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001062 absolute elasticity (obsolete PATO:0001062)","termid":"PATO:0001062"}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: GO:1900232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single-species biofilm formation","termid":"GO:1900191"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"negatively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"down regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"down-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"downregulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"inhibition of single-species biofilm formation on inanimate substrate","type":"narrow"}],"termid":"GO:1900232"}


id: MONDO:0030852
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87525],"is_not":false,"summary":null,"term":"MONDO:0030852"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies, sleep disturbance, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436821","OMIM:619103","MEDGEN:1777442"],"synonyms":[{"name":"NEDFASB","type":"exact"},{"name":"neurodevelopmental disorder with dysmorphic facies, sleep disturbance, and brain abnormalities","type":"exact"}],"termid":"MONDO:0030852","terms_by_termid":{"MONDO:0030852":null},"xrefs":{"Monarch":{"xref_id":"0030852"}}}


id: GO:0046540
data:
  {"annotated_genes":["SJAG_03954","SJAG_00989","SJAG_02469","SJAG_00531","SJAG_01327","SJAG_01308","SJAG_02455","SJAG_04405","SJAG_03369","SJAG_03460","SJAG_04538","SJAG_01870","SJAG_02295","SJAG_03469","SJAG_01819","SJAG_00147","SJAG_04529","SJAG_03410","SJAG_04222","SJAG_01301","SJAG_04497","SJAG_00643","SJAG_01634","SJAG_03070","SJAG_02279","SJAG_04433","SJAG_02304","SJAG_00414","SJAG_05240","SJAG_02843"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62910,64154,72227,72532,73391,74448,76063,77469,78183,79120,79149,79353,79437,80171,80288,80681,81132,81778,95007,97094,99935,102569,107799,107844,110516,112058,112621,113139,116881,118424],"is_not":false,"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U4/U6 and U5 snRNPs.","definition_xrefs":["GOC:pr","ISBN:0879695897","GOC:krc","PMID:11867543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"U4/U6.U5 snRNP complex","type":"exact"}],"termid":"GO:0046540","terms_by_termid":{"GO:0046540":null}}


id: PBO:0060403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 11, NatA catalytic subunit","termid":"PBO:0060403"}


id: PBO:0043992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate N-acetylgalactosaminyltransferase 2","termid":"PBO:0043992"}


id: PR:O42889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.05c","synonyms":[{"name":"Spom972h-SPBC8E4.05c","type":"exact"}],"termid":"PR:O42889"}


id: FYPO:0006912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clomiphene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on clomiphene","synonyms":[{"name":"normal cell population growth in presence of clomiphene","type":"exact"},{"name":"normal cell population growth on clomiphene","type":"exact"},{"name":"normal cellular response to clomiphene","type":"related"},{"name":"normal vegetative cell population growth on clomiphene","type":"exact"}],"termid":"FYPO:0006912"}


id: PBO:0038389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_protein","termid":"PBO:0038389"}


id: PATO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being marked by, consisting of, or diversified with patches.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patchy","termid":"PATO:0001608"}


id: MONDO:0022308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurodegenerative condition affecting the cerebral cortex and basal ganglia. The disorder is characterized by varying degrees of cognitive and motor impairment.","definition_xrefs":["NCIT:C129069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebral degeneration","termid":"MONDO:0024238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"corticobasal degeneration disorder","secondary_identifiers":["MEDGEN:95979","NANDO:1200011","SCTID:18842008","UMLS:C0393570"],"synonyms":[{"name":"CBGD","type":"related"},{"name":"cortical basal ganglionic degeneration","type":"exact"},{"name":"cortical-basal ganglionic degeneration","type":"related"},{"name":"cortico-basal ganglionic Degeneration (CBGD)","type":"related"},{"name":"corticobasal degeneration","type":"exact"},{"name":"corticobasal syndrome","type":"related"},{"name":"corticodentatonigral degeneration with neuronal achromasia","type":"related"}],"termid":"MONDO:0022308","xrefs":{"Monarch":{"xref_id":"0022308"}}}


id: GO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium channel in a cell membrane whose opening is governed by the membrane potential.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel complex","termid":"GO:0034706"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"voltage-gated sodium channel complex","secondary_identifiers":["NIF_Subcellular:sao785001660"],"synonyms":[{"name":"voltage gated sodium channel complex","type":"exact"},{"name":"voltage-dependent sodium channel complex","type":"exact"},{"name":"voltage-sensitive sodium channel complex","type":"exact"}],"termid":"GO:0001518"}


id: GO:0006390
data:
  {"annotated_genes":["SJAG_00634","SJAG_03014","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100101,89277,97051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006391"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase.","definition_xrefs":["PMID:23632312","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"part_of","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_03014":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0140053","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial transcription","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75944"],"synonyms":[{"name":"transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0006390","terms_by_termid":{"GO:0006391":null}}


id: PBO:0048964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein A33","termid":"PBO:0048964"}


id: MONDO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior scleritis","termid":"MONDO:0001804"},{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sclerosing keratitis","secondary_identifiers":["MEDGEN:509781","DOID:14444","ICD9:370.54","icd11.foundation:219361296","SCTID:27886001","UMLS:C0155090"],"synonyms":[{"name":"sclerokeratitis","type":"exact"}],"termid":"MONDO:0001965","xrefs":{"Monarch":{"xref_id":"0001965"}}}


id: PBO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 3","termid":"PBO:0001774"}


id: MONDO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute orbital inflammation","secondary_identifiers":["UMLS:C0155256","ICD9:376.0","DOID:11230","ICD9:376.00","MEDGEN:509876","SCTID:20551005"],"synonyms":[{"name":"acute inflammation of orbit","type":"exact"}],"termid":"MONDO:0001230","xrefs":{"Monarch":{"xref_id":"0001230"}}}


id: FYPO:0007282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and branched, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable branched, swollen vegetative cell","synonyms":[{"name":"viable branched, swollen cell during vegetative growth","type":"exact"},{"name":"viable branched, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007282"}


id: FYECO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"LNB medium is a Low Nutrient medium containing yeast nitrogen base without amino acids, glucose, salts and vitamins.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNB glucose medium","termid":"FYECO:0000328"}


id: PR:Q9Y7T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec59 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase sec59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.10c","synonyms":[{"name":"Spom972h-sec59","type":"exact"}],"termid":"PR:Q9Y7T6"}


id: MONDO:0014783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any preimplantation embryonic lethality in which the cause of the disease is a mutation in the TLE6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality 1 (obsolete MONDO:0014783)","secondary_identifiers":["OMIM:616814"],"synonyms":[{"name":"PREMBL1","type":"exact"},{"name":"Prembl","type":"related"},{"name":"TLE6 preimplantation embryonic lethality","type":"exact"},{"name":"preimplantation embryonic lethality","type":"broad"},{"name":"preimplantation embryonic lethality 1","type":"exact"},{"name":"preimplantation embryonic lethality 1; PREMBL1","type":"exact"},{"name":"preimplantation embryonic lethality caused by mutation in TLE6","type":"exact"},{"name":"preimplantation embryonic lethality type 1","type":"exact"}],"termid":"MONDO:0014783","xrefs":{"Monarch":{"xref_id":"0014783"}}}


id: PBO:0034734
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds S. pombe telomeric repeats with flexible sequence recognition requirements","termid":"PBO:0034734"}


id: PATO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"photosensitive","termid":"PATO:0000547"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased photosensitivity","synonyms":[{"name":"low photosensitivity","type":"exact"}],"termid":"PATO:0001697"}


id: PBO:0042618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin licensing and DNA replication factor 1","termid":"PBO:0042618"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["RHEA:54676","PMID:29315936","GOC:eab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PBO:0041286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 9B","termid":"PBO:0041286"}


id: PBO:0040819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3 interacting domain death agonist","termid":"PBO:0040819"}


id: PBO:0073162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 antisense RNA 1","termid":"PBO:0073162"}


id: PBO:0045382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 4","termid":"PBO:0045382"}


id: PBO:0090576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23","termid":"PBO:0090576"}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: GO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of torque on particles such as magnetite which respond to a magnetic field.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of mechanical stimulus","termid":"GO:0050979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in magnetoreception","synonyms":[{"name":"magnetoception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"magnetoreception, detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of mechanical stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050971"}


id: PBO:0042643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 18 pseudogene","termid":"PBO:0042643"}


id: MONDO:0021057
data:
  {"annotated_genes":["SJAG_03724","SJAG_01419","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[88990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An inherited diseases haracterized by the development of adenomas in the rectum and colon; classified into classic FAP and attenuated FAP.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic or attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"classic or attenuated FAP","type":"exact"},{"name":"classic or attenuated familial adenomatous polyposis","type":"exact"}],"termid":"MONDO:0021057","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021057"}}}


id: FYPO:0002302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spheroid, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spheroid cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, rounded cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, spheroid cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spheroid cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spheroid cell","type":"exact"}],"termid":"FYPO:0002302"}


id: PBO:0052949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1","termid":"PBO:0052949"}


id: GO:0032159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in germ tubes and hyphae in fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cap","termid":"GO:0032159"}


id: PBO:0085754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; stabilizes several plasma membrane amino acid transporters by antagonizing their ubiquitin-mediated degradation; phosphorylates Aly2p; negatively regulates Ldb19p-mediated endocytosis by phosphorylating Ldb19p; positively regulates activity of the three Mep ammonium transport proteins; mediates inhibitory phosphorylation of Mep2p and Par32p; TOR complex negatively regulates Npr1p activity; NPR1 has a paralog, PRR2, that arose from the whole genome duplication","termid":"PBO:0085754"}


id: PBO:0091213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA","termid":"PBO:0091213"}


id: GO:0030787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-4-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:23248","EC:2.1.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"inositol 4-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.129-RXN","KEGG_REACTION:R01190"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 4-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 4-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 4-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030787"}


id: MONDO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypotrichosis milia","termid":"MONDO:0022841","xrefs":{"Monarch":{"xref_id":"0022841"}}}


id: GO:0015895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alkanes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanes are saturated aliphatic hydrocarbon compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"alkane transport","termid":"GO:0015895"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: PBO:0082010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 8","termid":"PBO:0082010"}


id: GO:1900171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucocorticoid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucocorticoid mediated signaling pathway (obsolete GO:1900171)","synonyms":[{"name":"activation of glucocorticoid mediated signaling pathway","type":"narrow"},{"name":"activation of glucocorticoid mediated signalling","type":"narrow"},{"name":"positive regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"upregulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"upregulation of glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:1900171"}


id: PBO:0013820
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimeric","termid":"PBO:0013820"}


id: PBO:0088079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin (Ub) chain assembly factor (E4); forms branched Ub chains on substrates destined for degradation, catalyzing K48-linked multi-monoubiquitination of K29-linked Ub chains assembled by the Ub-ligase Ufd4p; involved in the Ub-fusion degradation pathway, OLE membrane fluidity pathway, stress response survival and the ERAD pathway for misfolded proteins, where it promotes ubiquitination and transfer of ERAD substrates to Rad23p; U-box family member; homologous to human Ufd2a and Ufd2b","termid":"PBO:0088079"}


id: SO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified lysine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_lysine","secondary_identifiers":["MOD:00912"],"synonyms":[{"name":"ModLys","type":"exact"},{"name":"modified L lysine","type":"exact"},{"name":"modified L-lysine","type":"exact"}],"termid":"SO:0001400"}


id: GO:1902401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA damage checkpoint (obsolete GO:1902401)","synonyms":[{"name":"perception of stimulus involved in mitotic DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in mitotic DNA damage checkpoint","type":"related"}],"termid":"GO:1902401"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: MOD:00093
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartic acid 1-amide.","definition_xrefs":["PubMed:2542051","RESID:AA0084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-butanediamic acid","type":"exact"},{"name":"1-amidated L-aspartic acid","type":"exact"},{"name":"3,4-diamino-4-oxobutanoic acid","type":"exact"},{"name":"3-amino-succinamic acid","type":"exact"},{"name":"AspN","type":"exact"},{"name":"L-aspartic acid 1-amide","type":"exact"},{"name":"MOD_RES Aspartic acid 1-amide","type":"exact"},{"name":"alpha-asparagine","type":"exact"},{"name":"isoasparagine","type":"exact"}],"termid":"MOD:00093"}


id: PBO:0078010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF interacting protein","termid":"PBO:0078010"}


id: MONDO:0016334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular disease with dilated cardiomyopathy (obsolete MONDO:0016334)","secondary_identifiers":["Orphanet:217610"],"termid":"MONDO:0016334","xrefs":{"Monarch":{"xref_id":"0016334"}}}


id: PBO:0055223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2649","termid":"PBO:0055223"}


id: GO:0090515
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105781],"is_not":false,"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"glutamate transmembrane import into vacuole","termid":"GO:0090454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-glutamate transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090515","terms_by_termid":{"GO:0090515":null}}


id: MONDO:0003826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extragonadal malignant germ cell tumor that arises from the mediastinum. It is characterized by the presence of uniform cells with clear or eosinophilic cytoplasm, round nucleus with one or more nucleoli, and distinct cellular borders. It usually arises from the anterior mediastinum. It may present with respiratory distress, chest pain, or superior vena cava syndrome or it may be asymptomatic, with the tumor detected on routine chest x-ray. The prognosis of mediastinal pure seminomas is favorable compared to the mediastinal non-seminomatous malignant germ cell tumors.","definition_xrefs":["NCIT:C6812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal seminoma","termid":"MONDO:0003668"},{"relation_name":"is_a","term_name":"mediastinal malignant germ cell tumor","termid":"MONDO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum seminoma","secondary_identifiers":["UMLS:C1334680","MEDGEN:277355","DOID:6249"],"synonyms":[{"name":"mediastinal seminoma","type":"exact"},{"name":"mediastinum seminoma","type":"exact"},{"name":"seminoma of mediastinum","type":"exact"},{"name":"seminoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003826","xrefs":{"Monarch":{"xref_id":"0003826"}}}


id: MOD:00849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a potassium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium containing modified residue","synonyms":[{"name":"KRes","type":"exact"}],"termid":"MOD:00849"}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: MONDO:0043230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning caused by ingestion of seafood containing microgram levels of ciguatoxins. The poisoning is characterized by gastrointestinal, neurological and cardiovascular disturbances.","definition_xrefs":["MESH:D036841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciguatera fish poisoning","secondary_identifiers":["EFO:1001291","SCTID:241774007"],"synonyms":[{"name":"Poisonings, ciguatera","type":"related"},{"name":"Poisonings, ciguatera fish","type":"related"},{"name":"ciguatera","type":"related"},{"name":"ciguatera Poisonings","type":"related"},{"name":"ciguatera fish Poisonings","type":"related"},{"name":"ciguatera fish poisoning","type":"exact"},{"name":"ciguatera poisoning","type":"related"},{"name":"ciguatoxin causing toxic effect","type":"exact"},{"name":"poisoning, ciguatera","type":"related"},{"name":"poisoning, ciguatera fish","type":"related"},{"name":"toxic effect of ciguatera fish poisoning","type":"related"}],"termid":"MONDO:0043230","xrefs":{"Monarch":{"xref_id":"0043230"}}}


id: PBO:0069113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 362, pseudogene","termid":"PBO:0069113"}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: PBO:0075572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 2B","termid":"PBO:0075572"}


id: PR:O94299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.16 gene.","definition_xrefs":["UniProtKB:O94299","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.16","synonyms":[{"name":"Spom972h-SPBC887.16","type":"exact"}],"termid":"PR:O94299"}


id: GO:2000866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estradiol secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estradiol secretion","termid":"GO:2000864"},{"relation_name":"positively_regulates","term_name":"estradiol secretion","termid":"GO:0035938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of estradiol secretion","synonyms":[{"name":"positive regulation of oestradiol secretion","type":"exact"}],"termid":"GO:2000866"}


id: MONDO:0014733
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87774],"is_not":false,"summary":null,"term":"MONDO:0014733"}]},"cv_name":"mondo","definition":"SURF1-related Charcot-Marie-Tooth disease type 4 (CMT4K) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by childhood onset of severe, progressive, demyelinating sensorimotor neuropathy manifesting with distal muscle weakness and atrophy of hands and feet, distal sensory impairment (vibration and pinprick) of lower limbs, lactic acidosis, areflexia and severely reduced motor nerve conduction velocities (25 m/s or less). Patients may also present kyphoscoliosis, nystagmus, hearing loss, cerebellar ataxia and/or brain MRI abnormalities (putaminal and periaqueductal lesions).","definition_xrefs":["Orphanet:391351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4K","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:895560","GARD:17616","SCTID:765047006","UMLS:C4225246","OMIM:616684","DOID:0110187"],"synonyms":[{"name":"CMT4K","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in SURF1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 4K","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, autosomal recessive, type 4K","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4K","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4k","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, demyelinating, autosomal recessive, type 4K","type":"related"},{"name":"SURF1 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"SURF1-related CMT4","type":"exact"},{"name":"SURF1-related Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"SURF1-related severe demyelinating Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth disease type 4K","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth neuropathy type 4K","type":"exact"}],"termid":"MONDO:0014733","terms_by_termid":{"MONDO:0014733":null},"xrefs":{"Monarch":{"xref_id":"0014733"}}}


id: PBO:0078417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-3","termid":"PBO:0078417"}


id: GO:0120187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["PMID:29899453","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromatin","termid":"GO:1905634"},{"relation_name":"positively_regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to chromatin","synonyms":[{"name":"positive regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:0120187"}


id: PBO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 2","termid":"PBO:0043004"}


id: PBO:0056473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAT2A pseudogene","termid":"PBO:0056473"}


id: PBO:0087946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4A; DEAD-box RNA helicase that couples ATPase activity to mRNA binding and unwinding; ATP hydrolysis accelerates the recruitment of mRNA during 48S preinitiation complex (PIC) assembly; ATPase activity stimulated by either eIF4G1 or by the PIC in an eIF3g and eIFGi subunit-dependent manner, independent of eIF4E and eIF4G; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E and eIF4G; protein abundance increases in response to DNA replication stress","termid":"PBO:0087946"}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["PMID:25964650","PMID:26523947","GO:0020022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: RO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is transcribed from y if and only if x is synthesized from template y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"RO:0002510"}


id: PBO:0057058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR142 host genes","termid":"PBO:0057058"}


id: MONDO:0010994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete micromelic dwarfism, Fryns type (obsolete MONDO:0010994)","secondary_identifiers":["SCTID:715479009","Orphanet:2641","MESH:C537556","OMIM:601096"],"synonyms":[{"name":"SEMD, micromelic","type":"related"},{"name":"dwarfism, micromelic, with cone epiphyses, metaphyseal dysplasia, and vertebral segmentation defects","type":"related"},{"name":"micromelic dwarfism with cone epiphyses, metaphyseal dysplasia and vertebral segmentation defects","type":"related"},{"name":"spondyloepimetaphyseal dysplasia micromelic","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, micromelic","type":"related"}],"termid":"MONDO:0010994","xrefs":{"Monarch":{"xref_id":"0010994"}}}


id: PR:P28829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr2 gene.","definition_xrefs":["UniProtKB:P28829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.05","synonyms":[{"name":"MAPK kinase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr2","type":"exact"},{"name":"protein kinase ste8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P28829"}


id: PBO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4 (predicted)","termid":"PBO:0000662"}


id: GO:1905719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the perinuclear region of the cytoplasm.","definition_xrefs":["PMID:15177031","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to perinuclear region of cytoplasm","synonyms":[{"name":"protein localisation in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localisation to perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization in perinuclear region of cytoplasm","type":"exact"},{"name":"protein localization to perinuclear cytoplasm","type":"exact"}],"termid":"GO:1905719"}


id: GO:0047446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1-hydroxycyclohexan-1-yl)acetyl-CoA = acetyl-CoA + cyclohexanone.","definition_xrefs":["RHEA:23868","EC:4.1.3.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(1-hydroxycyclohexan-1-yl)acetyl-CoA lyase activity","secondary_identifiers":["KEGG_REACTION:R02232","MetaCyc:4.1.3.35-RXN"],"synonyms":[{"name":"(1-hydroxycyclohexan-1-yl)acetyl-CoA cyclohexanone-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(1-hydroxycyclohexan-1-yl)acetyl-CoA cyclohexanone-lyase activity","type":"related"}],"termid":"GO:0047446"}


id: MONDO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Caroli disease (obsolete MONDO:0000506)","termid":"MONDO:0000506","xrefs":{"Monarch":{"xref_id":"0000506"}}}


id: PBO:0075718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin","termid":"PBO:0075718"}


id: PR:Q9P6J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1683.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.06c","synonyms":[{"name":"Spom972h-SPBC1683.06c","type":"exact"}],"termid":"PR:Q9P6J4"}


id: MONDO:1011960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rupture of the cranial cruciate ligament, non-human animal","secondary_identifiers":["OMIA:001474"],"termid":"MONDO:1011960","xrefs":{"Monarch":{"xref_id":"1011960"}}}


id: PBO:0072142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 19","termid":"PBO:0072142"}


id: FYPO:0002860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah","PMID:17449726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal poly(U) polymerase activity","synonyms":[{"name":"abnormal RNA uridylyltransferase activity","type":"exact"},{"name":"abnormal polynucleotide uridylyltransferase activity","type":"exact"}],"termid":"FYPO:0002860"}


id: GO:1903926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bisphenol A stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22957036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bisphenol A","termid":"GO:1903925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bisphenol A","termid":"GO:1903926"}


id: GO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine pyrophosphate + H2O = hydroxymethylpyrimidine phosphate + phosphate + H+.","definition_xrefs":["MetaCyc:RXN0-3543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity","secondary_identifiers":["RHEA:27914"],"synonyms":[{"name":"HMP-PP diphosphatase","type":"exact"},{"name":"HMP-PP pyrophosphatase","type":"exact"}],"termid":"GO:0002145"}


id: PBO:0049134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 2","termid":"PBO:0049134"}


id: PBO:0039861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 25","termid":"PBO:0039861"}


id: MONDO:1010799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis laxa that occurs in sika deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa, non-human animal","termid":"MONDO:1010155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, sika deer","secondary_identifiers":["OMIA:002404-9863"],"termid":"MONDO:1010799","xrefs":{"Monarch":{"xref_id":"1010799"}}}


id: GO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein deubiquitination","termid":"GO:0090086"}


id: GO:0010530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transposition. Transposition results in the movement of discrete segments of DNA between nonhomologous sites.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition (obsolete GO:0010530)","termid":"GO:0010530"}


id: MONDO:0016366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal phenylketonuria (PKU) is a rare disorder of phenylalanine metabolism, an inborn error of amino acid metabolism, characterized by the development of microcephaly, growth retardation, congenital heart disease, facial dysmorphism and intellectual disability in nonphenylketonuric offspring of mothers with excess phenylalanine (Phe) concentrations.","definition_xrefs":["Orphanet:2209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"maternal phenylketonuria","secondary_identifiers":["MESH:D017042","GARD:3413","MEDGEN:88435","UMLS:C0085547","icd11.foundation:1509230254"],"synonyms":[{"name":"hyperphenylalaninemic embryopathy","type":"exact"},{"name":"maternal PKU","type":"exact"},{"name":"maternal hyperphenylalaninemia","type":"exact"},{"name":"phenylketonuric embryopathy","type":"exact"}],"termid":"MONDO:0016366","xrefs":{"Monarch":{"xref_id":"0016366"}}}


id: MONDO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with dentinogenesis imperfecta (obsolete MONDO:0015669)","secondary_identifiers":["Orphanet:167762"],"termid":"MONDO:0015669","xrefs":{"Monarch":{"xref_id":"0015669"}}}


id: PBO:0063421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4A","termid":"PBO:0063421"}


id: PR:O74362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- esf2 gene.","definition_xrefs":["UniProtKB:O74362","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.05","synonyms":[{"name":"18S rRNA factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-esf2","type":"exact"}],"termid":"PR:O74362"}


id: MONDO:0016560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-syndactyly-learning difficulties syndrome","secondary_identifiers":["Orphanet:238766"],"termid":"MONDO:0016560","xrefs":{"Monarch":{"xref_id":"0016560"}}}


id: MONDO:0017783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital pancreatic cyst","secondary_identifiers":["icd11.foundation:981856956","MEDGEN:574418","Orphanet:313906","SCTID:204808002","GARD:21361","ICD10CM:Q45.2","UMLS:C0341480"],"synonyms":[{"name":"neonatal congenital pancreatic cyst","type":"exact"},{"name":"true congenital pancreatic cyst","type":"exact"}],"termid":"MONDO:0017783","xrefs":{"Monarch":{"xref_id":"0017783"}}}


id: PBO:0067873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 175","termid":"PBO:0067873"}


id: GO:0099500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space.","definition_xrefs":["GOC:aruk","ISBN:0071120009","PMID:18618940","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion to plasma membrane","termid":"GO:0099500"}


id: PBO:0070541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 7","termid":"PBO:0070541"}


id: MONDO:0013630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the B9D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 9","secondary_identifiers":["GARD:15773","UMLS:C3280155","OMIM:614209","MEDGEN:481785"],"synonyms":[{"name":"B9D1 Meckel syndrome","type":"exact"},{"name":"MKS9","type":"related"},{"name":"Meckel syndrome caused by mutation in B9D1","type":"exact"},{"name":"Meckel syndrome, type 9","type":"exact"},{"name":"meckel syndrome 9","type":"exact"}],"termid":"MONDO:0013630","xrefs":{"Monarch":{"xref_id":"0013630"}}}


id: GO:0160010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2-hydroxyisobutanoyl)-L-lysyl-[protein] = 2-hydroxy-2-methylpropanoate + L-lysyl-[protein].","definition_xrefs":["PMID:29192674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein de-2-hydroxyisobutyrylase activity","secondary_identifiers":["RHEA:69176"],"termid":"GO:0160010"}


id: GO:1901065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of syringal lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"},{"relation_name":"is_a","term_name":"syringal lignin metabolic process","termid":"GO:1901064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"syringal lignin catabolic process","synonyms":[{"name":"S-lignin catabolic process","type":"exact"},{"name":"syringal lignin breakdown","type":"exact"},{"name":"syringal lignin catabolism","type":"exact"},{"name":"syringal lignin degradation","type":"exact"}],"termid":"GO:1901065"}


id: MONDO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG1 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 1 deficiency","synonyms":[{"name":"recombinase activating gene 1 deficiency","type":"exact"}],"termid":"MONDO:0000572","xrefs":{"Monarch":{"xref_id":"0000572"}}}


id: MONDO:0008404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scalp-ear-nipple syndrome is characterized by the following triad: areas of hairless raw skin over the scalp (present at birth and healing during childhood), prominent, hypoplastic ears with almost absent pinnae, and bilateral amastia. Thirty cases have been described so far. Renal and urinary tract abnormalities, as well as cataract, have also been observed. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:2036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"mixed dermis disorder","termid":"MONDO:0019294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scalp-ear-nipple syndrome","secondary_identifiers":["SCTID:721888002","MEDGEN:357183","DOID:0111550","GARD:159","OMIM:181270","MESH:C536623","icd11.foundation:88843032","UMLS:C1867020"],"synonyms":[{"name":"Finlay-Marks syndrome","type":"exact"},{"name":"SENS","type":"related"},{"name":"Sen syndrome","type":"related"},{"name":"hereditary syndrome of lumpy scalp, odd ears and rudimentary nipples","type":"related"},{"name":"scalp ear nipple syndrome","type":"related"},{"name":"scalp-EAR-nipple syndrome","type":"related"},{"name":"scalp-ear-nipple syndrome","type":"exact"}],"termid":"MONDO:0008404","xrefs":{"Monarch":{"xref_id":"0008404"}}}


id: PBO:0086365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; Svp26p mediates uptake of Ktr3p into COPII vesicles; relocalizes from nucleus to vacuole upon DNA replication stress","termid":"PBO:0086365"}


id: GO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"negatively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"}


id: PATO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an object that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased object quality","termid":"PATO:0002305"}


id: PBO:0084453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Csh1p; SUR1 has a paralog, CSH1, that arose from the whole genome duplication","termid":"PBO:0084453"}


id: GO:0032557
data:
  {"annotated_genes":["SJAG_02288","SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89605,92736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002135"},{"annotations":[92742,93573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to a pyrimidine ribonucleotide, any compound consisting of a pyrimidine ribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide binding","termid":"GO:0019103"},{"relation_name":"is_a","term_name":"ribonucleotide binding","termid":"GO:0032553"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyrimidine ribonucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032557","terms_by_termid":{"GO:0002134":null,"GO:0002135":null}}


id: PBO:0049401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1A neighbor","termid":"PBO:0049401"}


id: GO:0034992
data:
  {"annotated_genes":["SJAG_04558","SJAG_05303","SJAG_01242","SJAG_03491","SJAG_04489","SJAG_05196","SJAG_03783","SJAG_05207","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72298],"is_not":false,"summary":null,"term":"GO:0034992"},{"annotations":[114848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034993"},{"annotations":[116726,105674,99879,89819,102826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180028"},{"annotations":[98638,104764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches; protein complexes embedded in the nuclear envelope mediate direct or indirect linkages between the microtubule cytoskeleton and the nuclear envelope.","definition_xrefs":["GOC:mah","PMID:18692466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01538":null,"SJAG_03491":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_04558":null,"SJAG_05196":null,"SJAG_05207":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"microtubule organizing center attachment site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MAS","type":"exact"},{"name":"MTOC attachment site","type":"exact"},{"name":"microtubule organising centre attachment site","type":"exact"}],"termid":"GO:0034992","terms_by_termid":{"GO:0034992":null,"GO:0034993":null,"GO:0180028":null,"GO:1990612":null}}


id: PBO:0065080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase 2B, pseudogene","termid":"PBO:0065080"}


id: GO:1900869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tatiopterin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tatiopterin metabolic process","synonyms":[{"name":"tatiopterin metabolism","type":"exact"}],"termid":"GO:1900869"}


id: PBO:0035963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035963"}


id: PBO:0006190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_happens_during","termid":"PBO:0006190"}


id: PBO:0028258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3K9me_binding","termid":"PBO:0028258"}


id: GO:1905570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["PMID:654321","GO_REF:0000058","GOC:TermGenie","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of siderophore biosynthetic process","termid":"GO:1900706"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"positively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of ferrichrome biosynthetic process","synonyms":[{"name":"activation of ferrichrome anabolism","type":"narrow"},{"name":"activation of ferrichrome biosynthesis","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferrichrome formation","type":"narrow"},{"name":"activation of ferrichrome synthesis","type":"narrow"},{"name":"positive regulation of ferrichrome anabolism","type":"exact"},{"name":"positive regulation of ferrichrome biosynthesis","type":"exact"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferrichrome formation","type":"exact"},{"name":"positive regulation of ferrichrome synthesis","type":"exact"},{"name":"up regulation of ferrichrome anabolism","type":"exact"},{"name":"up regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferrichrome formation","type":"exact"},{"name":"up regulation of ferrichrome synthesis","type":"exact"},{"name":"up-regulation of ferrichrome anabolism","type":"exact"},{"name":"up-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferrichrome formation","type":"exact"},{"name":"up-regulation of ferrichrome synthesis","type":"exact"},{"name":"upregulation of ferrichrome anabolism","type":"exact"},{"name":"upregulation of ferrichrome biosynthesis","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferrichrome formation","type":"exact"},{"name":"upregulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905570"}


id: GO:1905226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15659068"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905226)","termid":"GO:1905226"}


id: MONDO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cutis laxa type I characterized by disturbed elastic fiber formation resulting in severe systemic connective tissue abnormalities that has material basis in homozygous or compound heterozygous mutation in the EFEMP2 gene on chromosome 11q13.","definition_xrefs":["DOID:0070133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1B","secondary_identifiers":["UMLS:C3280798","OMIM:614437","GARD:15804","MEDGEN:482428"],"synonyms":[{"name":"ARCL1B","type":"exact"},{"name":"autosomal recessive cutis laxa type IB","type":"related"},{"name":"cutis laxa, autosomal recessive, type IB","type":"related"}],"termid":"MONDO:0013754","xrefs":{"Monarch":{"xref_id":"0013754"}}}


id: MONDO:0022820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital articular rigidity","secondary_identifiers":["MEDGEN:108568","UMLS:C0595987"],"termid":"MONDO:0022820","xrefs":{"Monarch":{"xref_id":"0022820"}}}


id: PBO:0070640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 11","termid":"PBO:0070640"}


id: PBO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smf1","termid":"PBO:0004158"}


id: PR:Q92359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf4 gene.","definition_xrefs":["UniProtKB:Q92359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C6G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.14","synonyms":[{"name":"Spom972h-puf4","type":"exact"}],"termid":"PR:Q92359"}


id: MONDO:0005306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune chronic inflammatory disorder characterized by inflammation in the vertebral joints of the spine and sacroiliac joints. It predominantly affects young males. Patients present with stiffness and pain in the spine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylitis","termid":"MONDO:0003937"},{"relation_name":"is_a","term_name":"spondyloarthropathy","termid":"MONDO:0005095"},{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"},{"relation_name":"is_a","term_name":"vertebral joint disorder","termid":"MONDO:0037847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"ankylosing spondylitis","secondary_identifiers":["ICD9:720.0","Orphanet:825","NANDO:1200870","DOID:7147","MESH:D013167","ICD10CM:M45","NCIT:C84564","MEDGEN:11561","UMLS:C0038013","EFO:0003898","SCTID:9631008"],"synonyms":[{"name":"Bekhterev syndrome","type":"exact"},{"name":"Bekhterev's disease","type":"exact"},{"name":"Marie-Strumpell disease","type":"exact"},{"name":"ankylosing spondylarthritis","type":"exact"}],"termid":"MONDO:0005306","xrefs":{"Monarch":{"xref_id":"0005306"}}}


id: PBO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member A","termid":"PBO:0047147"}


id: PBO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 28","termid":"PBO:0072342"}


id: GO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-27 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-27 receptor binding","synonyms":[{"name":"IL-27","type":"narrow"},{"name":"interleukin-27 receptor ligand","type":"narrow"}],"termid":"GO:0045523"}


id: PBO:0073374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 4B, pseudogene","termid":"PBO:0073374"}


id: PBO:0052861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-4","termid":"PBO:0052861"}


id: GO:0042599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.","definition_xrefs":["GOC:cjm","GOC:jl","PMID:12243725","Wikipedia:Lamellar_granule"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lamellar body","secondary_identifiers":["NIF_Subcellular:sao1379604862"],"synonyms":[{"name":"Odland body","type":"narrow"},{"name":"keratinosome","type":"narrow"},{"name":"lamellar granule","type":"exact"},{"name":"membrane-coating granule","type":"exact"}],"termid":"GO:0042599"}


id: PBO:0069004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 248, pseudogene","termid":"PBO:0069004"}


id: PBO:0027686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_branched,_elongated_cell","termid":"PBO:0027686"}


id: GO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}


id: GO:1990514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads 5' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.","definition_xrefs":["GOC:pf","PMID:24369430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitive RNA interference","termid":"GO:0036453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"5' transitive RNA interference","termid":"GO:1990514"}


id: PBO:0038492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 3","termid":"PBO:0038492"}


id: PATO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tendency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"tendency","termid":"PATO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tendency","termid":"PATO:0002362"}


id: PBO:0031634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gene_silencing","termid":"PBO:0031634"}


id: MONDO:0958182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"C1Q deficiency","termid":"MONDO:0013343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1Q deficiency 1","secondary_identifiers":["OMIM:613652"],"termid":"MONDO:0958182","xrefs":{"Monarch":{"xref_id":"0958182"}}}


id: GO:0070921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of siRNA processing","secondary_identifiers":["GO:0090065"],"synonyms":[{"name":"regulation of RNA interference, production of siRNA","type":"exact"},{"name":"regulation of chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"regulation of production of siRNA involved in PTGS","type":"related"},{"name":"regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"regulation of production of siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"regulation of production of siRNA involved in gene silencing by small RNA","type":"related"},{"name":"regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"regulation of siRNA production","type":"related"}],"termid":"GO:0070921"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: MONDO:1010050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia, non-human animal","secondary_identifiers":["OMIA:000017"],"termid":"MONDO:1010050","xrefs":{"Monarch":{"xref_id":"1010050"}}}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: PBO:0075673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit A","termid":"PBO:0075673"}


id: GO:0046090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleoside metabolic process","termid":"GO:0046122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyadenosine metabolic process","synonyms":[{"name":"deoxyadenosine metabolism","type":"exact"}],"termid":"GO:0046090"}


id: PBO:0080948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 3","termid":"PBO:0080948"}


id: PBO:0057098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 193b","termid":"PBO:0057098"}


id: MONDO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microcephalic primordial dwarfism (obsolete MONDO:0000139)","termid":"MONDO:0000139","xrefs":{"Monarch":{"xref_id":"0000139"}}}


id: MONDO:0007468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete DNA, satellite, alpha type (obsolete MONDO:0007468)","secondary_identifiers":["OMIM:126410"],"synonyms":[{"name":"DNA, satellite, alpha type","type":"exact"}],"termid":"MONDO:0007468","xrefs":{"Monarch":{"xref_id":"0007468"}}}


id: FYPO:0007873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exocytosis is abnormal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0006887","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal exocytosis","synonyms":[{"name":"exocytosis defects","type":"exact"}],"termid":"FYPO:0007873"}


id: GO:0052001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of bacterial clusters to the surface of the host in a type IV pili dependent manner. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion to host cell via type IV pili","synonyms":[{"name":"type IV pili-dependent localized adherence to host","type":"exact"}],"termid":"GO:0052001"}


id: PBO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 2","termid":"PBO:0044299"}


id: PBO:0004889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of MBF","termid":"PBO:0004889"}


id: MONDO:0004695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lymphoma that arises from the liver and the bulk of the tumor is located in the liver. The most frequent types of lymphoma that arise from the liver are diffuse large B-cell lymphoma and mucosa-associated lymphoid tissue lymphoma.","definition_xrefs":["NCIT:C4949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver lymphoma","secondary_identifiers":["UMLS:C1112746","DOID:901","MEDGEN:207276"],"synonyms":[{"name":"hepatic lymphoma","type":"exact"},{"name":"liver lymphoma","type":"exact"},{"name":"lymphoma of liver","type":"exact"},{"name":"lymphoma of the liver","type":"exact"},{"name":"primary hepatic lymphoma","type":"exact"},{"name":"primary liver lymphoma","type":"exact"}],"termid":"MONDO:0004695","xrefs":{"Monarch":{"xref_id":"0004695"}}}


id: GO:0140876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of andrastin A, a meroterpenoid that exhibits inhibitory activity against ras farnesyltransferase, suggesting that it could have promising antitumor activity.","definition_xrefs":["DOI:10.1016/j.tet.2013.07.029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"andrastin A biosynthetic process","synonyms":[{"name":"andrastin A anabolism","type":"exact"},{"name":"andrastin A biosynthesis","type":"exact"},{"name":"andrastin A formation","type":"exact"},{"name":"andrastin A synthesis","type":"exact"}],"termid":"GO:0140876"}


id: MONDO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limited cutaneous systemic sclerosis (lcSSc) is a subtype of systemic sclerosis (SSc) characterized by the association of Raynaud's phenomenon with skin fibrosis limited to the hands, face, feet and forearms.","definition_xrefs":["Orphanet:220402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"limited cutaneous systemic sclerosis","secondary_identifiers":["MEDGEN:148187","DOID:1577","GARD:1053","MESH:D045745","UMLS:C0748540","NANDO:1201011","SCTID:298285004","SCTID:299276009"],"synonyms":[{"name":"limited cutaneous systemic scleroderma","type":"exact"},{"name":"limited scleroderma","type":"exact"},{"name":"systemic sclerosis, limited","type":"exact"}],"termid":"MONDO:0016358","xrefs":{"Monarch":{"xref_id":"0016358"}}}


id: MONDO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 4 (obsolete MONDO:0000560)","termid":"MONDO:0000560","xrefs":{"Monarch":{"xref_id":"0000560"}}}


id: GO:1900231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"}


id: GO:0046294
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79930,97447],"is_not":false,"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"},{"relation_name":"is_a","term_name":"cellular detoxification of aldehyde","termid":"GO:0110095"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0098754"],"is_obsolete":false,"name":"formaldehyde catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde breakdown","type":"exact"},{"name":"formaldehyde catabolism","type":"exact"},{"name":"formaldehyde degradation","type":"exact"},{"name":"methanal catabolic process","type":"exact"},{"name":"methanal catabolism","type":"exact"}],"termid":"GO:0046294","terms_by_termid":{"GO:0046294":null}}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: PBO:0028033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_mononucleate_vegetative_cell","termid":"PBO:0028033"}


id: PBO:0062354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily N member 2","termid":"PBO:0062354"}


id: PBO:0084582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL060C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL061C","termid":"PBO:0084582"}


id: GO:0090010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090010)","synonyms":[{"name":"TGFbeta signaling pathway involved in primitive streak formation","type":"related"},{"name":"transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090010"}


id: GO:1900515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of D-xylose catabolic process","termid":"GO:0043469"},{"relation_name":"regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"regulation of xylose catabolic process to ethanol","synonyms":[{"name":"regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900515"}


id: MONDO:0010506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the RLIM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 61","secondary_identifiers":["DOID:0112042","GARD:22695","OMIM:300978","MEDGEN:924419","UMLS:C4283894"],"synonyms":[{"name":"MRX61","type":"exact"},{"name":"RLIM non-syndromic X-linked intellectual disability","type":"exact"},{"name":"Tonne-Kalscheuer syndrome","type":"exact"},{"name":"intellectual disability, X-linked 61","type":"exact"},{"name":"intellectual disability, X-linked type 61","type":"exact"},{"name":"mental retardation, X-linked 61","type":"exact"},{"name":"mental retardation, X-linked type 61","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in RLIM","type":"exact"}],"termid":"MONDO:0010506","xrefs":{"Monarch":{"xref_id":"0010506"}}}


id: MONDO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An olfactory neuroblastoma arising in the nasal cavity.","definition_xrefs":["NCIT:C7604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity cancer","termid":"MONDO:0001128"},{"relation_name":"is_a","term_name":"olfactory neuroblastoma","termid":"MONDO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity olfactory neuroblastoma","secondary_identifiers":["MEDGEN:233749","UMLS:C1334923","DOID:10812"],"synonyms":[{"name":"nasal cavity olfactory neuroblastoma","type":"exact"},{"name":"olfactory neuroblastoma of nasal cavity","type":"exact"},{"name":"olfactory neuroblastoma of the nasal cavity","type":"exact"}],"termid":"MONDO:0001129","xrefs":{"Monarch":{"xref_id":"0001129"}}}


id: PBO:0075286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 27","termid":"PBO:0075286"}


id: PBO:0053386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 313","termid":"PBO:0053386"}


id: PBO:0087424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit A of the V1 peripheral membrane domain of V-ATPase; protein precursor undergoes self-catalyzed splicing to yield the extein Tfp1p and the intein Vde (PI-SceI), which is a site-specific endonuclease; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits; involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0087424"}


id: PBO:0065348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRXL2C pseudogene 1","termid":"PBO:0065348"}


id: GO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide receptor activity","termid":"GO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"purinergic nucleotide receptor activity","secondary_identifiers":["GO:0035586"],"synonyms":[{"name":"P2 receptor","type":"related"},{"name":"purinergic receptor activity","type":"related"},{"name":"purinoceptor","type":"exact"},{"name":"purinoreceptor","type":"exact"}],"termid":"GO:0001614"}


id: GO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to protect an organism from a directly detected or perceived external threat from a nematode or nematodes, which results in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.","definition_xrefs":["GOC:add","PMID:11516579","PMID:14506883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to nematode","secondary_identifiers":["GO:0002216"],"synonyms":[{"name":"physiological defense response to nematode","type":"exact"}],"termid":"GO:0002215"}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: PBO:0051725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSYN1 antisense RNA 1","termid":"PBO:0051725"}


id: PBO:0067921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 223","termid":"PBO:0067921"}


id: PBO:0004729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine ammonia-lyase (predicted)","termid":"PBO:0004729"}


id: GO:0010973
data:
  {"annotated_genes":["SJAG_00514","SJAG_00082","SJAG_03704","SJAG_01805","SJAG_03936","SJAG_05290","SJAG_01188","SJAG_01114","SJAG_03631","SJAG_04468","SJAG_04776","SJAG_03048","SJAG_03342","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117494,119922,95699,94311,107146,79724,91749,108358,109018,115374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[89396,91882,95703,112520,104333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of division septum formation. division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:22786806","PMID:19959363","PMID:21246752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"positive regulation of cell septum assembly","termid":"GO:1901893"},{"relation_name":"positively_regulates","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901912","GO:1902470"],"synonyms":[{"name":"positive regulation of division septum formation","type":"exact"},{"name":"positive regulation of division septum formation involved in cell cycle cytokinesis","type":"exact"},{"name":"upregulation of mitotic division septum assembly","type":"exact"}],"termid":"GO:0010973","terms_by_termid":{"GO:0031031":null,"GO:0140281":null}}


id: PBO:0082329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; releases Rlp24p from purified pre-60S particles in vitro; target of the ribosomal biosynthesis inhibitor diazaborine; may be involved in degradation of aberrant mRNAs","termid":"PBO:0082329"}


id: PBO:0051304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-2 (pseudogene)","termid":"PBO:0051304"}


id: _global:genome_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome_of","termid":"_global:genome_of"}


id: MONDO:0032813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 79","secondary_identifiers":["UMLS:C5231410","DOID:0112215","OMIM:618559","MEDGEN:1684738","GARD:16366"],"synonyms":[{"name":"DEE79","type":"exact"},{"name":"EIEE79","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 79","type":"exact"},{"name":"developmental and epileptic encephalopathy 79","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 79","type":"exact"}],"termid":"MONDO:0032813","xrefs":{"Monarch":{"xref_id":"0032813"}}}


id: GO:0060375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mast cell differentiation, the process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"mast cell differentiation","termid":"GO:0060374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell differentiation","termid":"GO:0060375"}


id: PR:O94274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.26","synonyms":[{"name":"Spom972h-SPBP8B7.26","type":"exact"}],"termid":"PR:O94274"}


id: RO:HOM0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homocracy that involves recognizably corresponding characters that occurs in two or more taxa, or as a repeated unit within an individual.","definition_xrefs":["DOI:10.1002/1521-1878(200009)22:9<846::AID-BIES10>3.0.CO;2-R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syngeny_relationship_with","synonyms":[{"name":"generative homology","type":"exact"},{"name":"syngenous to","type":"exact"}],"termid":"RO:HOM0000058"}


id: PBO:0055083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2501","termid":"PBO:0055083"}


id: FYPO:0004747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cortical patches at one or both cell tips than normal during early mitosis (before anaphase).","definition_xrefs":["PomBase:mah","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"actin cortical patches present in increased numbers at cell tip during early mitosis","synonyms":[{"name":"F-actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"accumulation of actin cortical patches at cell tip during early mitosis","type":"related"},{"name":"actin cortical patches in increased numbers at cell tip during early mitosis during vegetative growth","type":"exact"},{"name":"actin cortical patches present in greater numbers at cell tip during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell end during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during cell growth during early mitotic nuclear division","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during early mitosis during mitotic cell cycle","type":"related"},{"name":"actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"additional actin cortical patches present at cell tip during early mitosis","type":"exact"},{"name":"extra actin cortical patches at cell tip during early mitosis","type":"exact"},{"name":"increased number of actin patches at cell tip in early mitosis","type":"exact"}],"termid":"FYPO:0004747"}


id: PBO:0039481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A4, pseudogene","termid":"PBO:0039481"}


id: PBO:0058961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 4, pseudogene","termid":"PBO:0058961"}


id: PBO:0081850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 783","termid":"PBO:0081850"}


id: PBO:0065380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 8","termid":"PBO:0065380"}


id: GO:1905161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a phagocytic vesicle.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:23303671","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to phagocytic vesicle","synonyms":[{"name":"protein localisation in phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagosome","type":"exact"},{"name":"protein localization in phagocytic vesicle","type":"exact"},{"name":"protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905161"}


id: PR:A6X980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.07","synonyms":[{"name":"Spom972h-sfc7","type":"exact"},{"name":"TFIIIC subunit sfc7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:A6X980"}


id: FYPO:0008302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which the localization of a protein to discrete regions in the nucleus, visible as foci or dots by microscopy, is abolished.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008302"}


id: PATO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001143 ig e concentration value (obsolete PATO:0001143)","termid":"PATO:0001143"}


id: PBO:0087760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of THO/TREX complexes; this complex couple transcription elongation with mitotic recombination and with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; involved in telomere maintenance; similar to Top1p","termid":"PBO:0087760"}


id: MONDO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the endocardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"endocardium disorder","secondary_identifiers":["MEDGEN:678520","SCTID:123596001","UMLS:C0854140","DOID:0050825"],"synonyms":[{"name":"disease of endocardium","type":"exact"},{"name":"disease or disorder of endocardium","type":"exact"},{"name":"disorder of endocardium","type":"exact"},{"name":"endocardial disease","type":"exact"},{"name":"endocardiopathy","type":"related"},{"name":"endocardium disease","type":"exact"},{"name":"endocardium disease or disorder","type":"exact"}],"termid":"MONDO:0000470","xrefs":{"Monarch":{"xref_id":"0000470"}}}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: PR:O60186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.01","synonyms":[{"name":"Spom972h-rsm10","type":"exact"}],"termid":"PR:O60186"}


id: PBO:0085645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor","termid":"PBO:0085645"}


id: MONDO:0020102
data:
  {"annotated_genes":["SJAG_01183","SJAG_04731","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[87137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[88244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[89066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01183":null,"SJAG_03497":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hereditary stomatocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19456","ICD9:282.8","Orphanet:98365","SCTID:14087004","NANDO:2200623","icd11.foundation:2067120097","UMLS:C1262483","MEDGEN:490161"],"synonyms":[{"name":"hereditary stomatocytic disease","type":"exact"}],"termid":"MONDO:0020102","terms_by_termid":{"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0012204":null,"MONDO:0019107":null},"xrefs":{"Monarch":{"xref_id":"0020102"}}}


id: PR:O94699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein C83.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.16c","synonyms":[{"name":"Spom972h-SPBC83.16c","type":"exact"}],"termid":"PR:O94699"}


id: GO:0098876
data:
  {"annotated_genes":["SJAG_03970","SJAG_00144","SJAG_01945","SJAG_01135","SJAG_04044","SJAG_04358","SJAG_03915","SJAG_00379","SJAG_04565","SJAG_00314","SJAG_00858","SJAG_00916","SJAG_02811","SJAG_01382","SJAG_02282","SJAG_00669","SJAG_01114","SJAG_02912","SJAG_01335","SJAG_04509","SJAG_02753","SJAG_00430","SJAG_03838","SJAG_04609","SJAG_03864","SJAG_03756","SJAG_04846","SJAG_01516","SJAG_03250","SJAG_03754","SJAG_02320","SJAG_02240","SJAG_03938","SJAG_00330","SJAG_00826","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76546,81426,117669,81265,81892,74857,82108,74881,117747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032456"},{"annotations":[61905,114796,120935,115013,103071,96806,67787,93181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[109015,71942,97062,79373,108387,111572,110783,115015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[94163,109362,77790,79165,57585,74364,72448,73685,101692,102789,108265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[89955],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[89763],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"The directed movement of substances to the plasma membrane in transport vesicles that fuse with the plasma membrane by exocytosis.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00314":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01135":null,"SJAG_01335":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle-mediated transport to the plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0098876","terms_by_termid":{"GO:0006893":null,"GO:0032456":null,"GO:0042997":null,"GO:0043001":null,"GO:0099638":null,"GO:2001135":null}}


id: PR:O94662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.04 gene.","definition_xrefs":["UniProtKB:O94662","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C651.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.04","synonyms":[{"name":"Spom972h-SPBC651.04","type":"exact"}],"termid":"PR:O94662"}


id: GO:0009245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.","definition_xrefs":["PMID:20974832","PMID:22216004","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"lipid A metabolic process","termid":"GO:0046493"},{"relation_name":"is_a","term_name":"lipooligosaccharide biosynthetic process","termid":"GO:1901271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid A biosynthetic process","secondary_identifiers":["MetaCyc:NAGLIPASYN-PWY"],"synonyms":[{"name":"lipid A anabolism","type":"exact"},{"name":"lipid A biosynthesis","type":"exact"},{"name":"lipid A formation","type":"exact"},{"name":"lipid A synthesis","type":"exact"}],"termid":"GO:0009245"}


id: GO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043553)","synonyms":[{"name":"down regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"down-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"downregulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"inhibition of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"negative regulation of PI3K activity","type":"exact"},{"name":"negative regulation of phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0043553"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0040568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 3","termid":"PBO:0040568"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: GO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of ovarian cells, an organelle derived from the spectrosome. It anchors the mitotic spindle pole to provide orientation during cystoblast cell divisions.","definition_xrefs":["GOC:jl","GOC:mah","ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian fusome organization","synonyms":[{"name":"ovarian fusome organisation","type":"exact"},{"name":"ovarian fusome organization and biogenesis","type":"related"}],"termid":"GO:0030723"}


id: MOD:00334
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between the tele nitrogen of a histidine residue and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0329","PubMed:12033922","Unimod:390#H","PubMed:12121092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-heme-L-histidine","synonyms":[{"name":"(S)-[7-ethenyl-12-[1-((2-amino-2-carboxyethyl)-1H-imidazol-1-yl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"1'-heme-L-histidine","type":"exact"},{"name":"2-[1-(N1'-histidyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent; via tele nitrogen)","type":"exact"},{"name":"Heme","type":"related"},{"name":"N(epsilon)-histidyl heme","type":"exact"},{"name":"N(tau)-histidyl heme","type":"exact"},{"name":"N1'-histidyl heme","type":"exact"},{"name":"heme","type":"related"},{"name":"tele-histidyl heme","type":"exact"}],"termid":"MOD:00334"}


id: PBO:0091781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious protein, reverse strand of sno20","termid":"PBO:0091781"}


id: PBO:0083689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoyl reductase; catalyzes last step in each cycle of very long chain fatty acid elongation; localizes to ER, highly enriched in a structure marking nuclear-vacuolar junctions; coimmunoprecipitates with elongases Elo2p and Elo3p; protein increases in abundance and relative distribution to ER foci increases upon DNA replication stress; human homolog TECR implicated in nonsyndromic mental retardation, can complement yeast mutant","termid":"PBO:0083689"}


id: MONDO:1011223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, horse","secondary_identifiers":["OMIA:000275-9796"],"termid":"MONDO:1011223","xrefs":{"Monarch":{"xref_id":"1011223"}}}


id: PBO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo kinase Plo1","termid":"PBO:0001383"}


id: MONDO:0011597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 20p.","definition_xrefs":["PMID:11279517","DOID:0110099","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 3","secondary_identifiers":["MESH:C565292","MEDGEN:344173","UMLS:C1853964","OMIM:605804"],"synonyms":[{"name":"ATOD3","type":"exact"},{"name":"atopic dermatitis 3","type":"exact"},{"name":"atopic dermatitis type 3","type":"exact"},{"name":"atopic dermatitis with asthma","type":"exact"},{"name":"dermatitis, ATOPIC, 3","type":"related"},{"name":"dermatitis, Atopic, with asthma","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011597","xrefs":{"Monarch":{"xref_id":"0011597"}}}


id: GO:0075103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075103)","synonyms":[{"name":"modulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075103"}


id: FYPO:0001133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal DNA replication","termid":"FYPO:0001133"}


id: PBO:0082989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic branched-chain amino acid (BCAA) aminotransferase; preferentially involved in BCAA catabolism; homolog of murine ECA39; highly expressed during stationary phase and repressed during logarithmic phase; BAT2 has a paralog, BAT1, that arose from the whole genome duplication","termid":"PBO:0082989"}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: MOD:01163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphoguanosine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["DeltaMass:304","Unimod:413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylated residue","synonyms":[{"name":"5'phos Guanosyl","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:01163"}


id: FYPO:0001918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing trifluoperazine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on trifluoperazine","synonyms":[{"name":"normal cell population growth in presence of trifluoperazine","type":"exact"},{"name":"normal cell population growth on trifluoperazine","type":"exact"},{"name":"normal cellular response to trifluoperazine","type":"related"},{"name":"normal vegetative cell population growth on trifluoperazine","type":"exact"}],"termid":"FYPO:0001918"}


id: PBO:0041397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 15","termid":"PBO:0041397"}


id: PBO:0072414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 19","termid":"PBO:0072414"}


id: MONDO:1011436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytosis, non-human animal","secondary_identifiers":["OMIA:000474"],"termid":"MONDO:1011436","xrefs":{"Monarch":{"xref_id":"1011436"}}}


id: GO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-lysine to form peptidyl-L-lysine methyl ester.","definition_xrefs":["RESID:AA0318"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-lysine methyl ester biosynthetic process from peptidyl-lysine (obsolete GO:0042034)","synonyms":[{"name":"peptidyl-lysine esterification","type":"exact"}],"termid":"GO:0042034"}


id: PBO:0029609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_tapered_vegetative_cell","termid":"PBO:0029609"}


id: GO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized larval imaginal disc epithelium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0016336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0042251"}


id: PBO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GEF","termid":"PBO:0090709"}


id: PBO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 6","termid":"PBO:0048494"}


id: PBO:0067237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 308, pseudogene","termid":"PBO:0067237"}


id: MONDO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM67 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 6","secondary_identifiers":["OMIM:610688","MESH:C537689","DOID:0111001","GARD:15494","MEDGEN:342805","UMLS:C1853153"],"synonyms":[{"name":"JBTS6","type":"exact"},{"name":"Joubert syndrome 6","type":"exact"},{"name":"Joubert syndrome caused by mutation in TMEM67","type":"exact"},{"name":"Joubert syndrome type 6","type":"exact"},{"name":"TMEM67 Joubert syndrome","type":"exact"}],"termid":"MONDO:0012539","xrefs":{"Monarch":{"xref_id":"0012539"}}}


id: PBO:0071771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 4","termid":"PBO:0071771"}


id: PBO:0039656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit sigma 3","termid":"PBO:0039656"}


id: MONDO:0015768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 5p is a chromosomal abnormality resulting from the duplication of a segment of variable size of the short arm of chromosome 5, which usually involves the distal band 5p15. The clinical presentation is variable but is always associated with severe intellectual deficit.","definition_xrefs":["Orphanet:1742"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 5","termid":"MONDO:0016942"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 5p","secondary_identifiers":["MEDGEN:1672500","NORD:957","GARD:6093","UMLS:C0812464"],"synonyms":[{"name":"5p duplication","type":"related"},{"name":"5p trisomy","type":"related"},{"name":"Chromosome 5, Trisomy 5p","type":"exact"},{"name":"Duplication 5p","type":"exact"},{"name":"Duplication of the short arm of chromosome 5","type":"exact"},{"name":"chromosome 5p duplication","type":"related"},{"name":"partial trisomy 5p","type":"related"},{"name":"trisomy of the short arm of chromosome 5","type":"exact"},{"name":"trisomy type 5p","type":"exact"}],"termid":"MONDO:0015768","xrefs":{"Monarch":{"xref_id":"0015768"}}}


id: PR:Q9P3B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rcf2 gene.","definition_xrefs":["UniProtKB:Q9P3B2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory supercomplex factor 2 homolog C1565.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.01","synonyms":[{"name":"Spom972h-rcf2","type":"exact"}],"termid":"PR:Q9P3B2"}


id: GO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear interphase chromosome (obsolete GO:0000232)","synonyms":[{"name":"nuclear interphase chromosome","type":"exact"}],"termid":"GO:0000232"}


id: MONDO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of the conjunctiva.","definition_xrefs":["NCIT:C27605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival disorder","secondary_identifiers":["UMLS:C0009759","DOID:4251","EFO:1000203","MEDGEN:3207","ICD10CM:H10-H11"],"synonyms":[{"name":"conjunctiva disease","type":"exact"},{"name":"conjunctiva disease or disorder","type":"exact"},{"name":"conjunctival disease","type":"exact"},{"name":"conjunctival disorder","type":"exact"},{"name":"disease of conjunctiva","type":"exact"},{"name":"disease or disorder of conjunctiva","type":"exact"},{"name":"disorder of conjunctiva","type":"exact"}],"termid":"MONDO:0006170","xrefs":{"Monarch":{"xref_id":"0006170"}}}


id: PBO:0049353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 11","termid":"PBO:0049353"}


id: MONDO:0024309
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86903],"is_not":false,"summary":null,"term":"MONDO:0024309"}]},"cv_name":"mondo","definition":"A hereditary sensory and autonomic neuropathy type 2 characterized by progressive sensory neuropathy with onset in childhood that has material basis in mutation in the HSN2 isoform of the WNK1 gene on chromosome 12p13","definition_xrefs":["DOID:0070155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 2","termid":"MONDO:0019941"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, type 2A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:416701","OMIM:201300","UMLS:C2752089","GARD:15129"],"synonyms":[{"name":"HSAN 2A","type":"exact"},{"name":"HSAN2A","type":"exact"},{"name":"HSN 2A","type":"exact"},{"name":"Morvan disease","type":"related"},{"name":"acroosteolysis, Giaccai type","type":"related"},{"name":"acroosteolysis, neurogenic","type":"related"},{"name":"hereditary sensory and autonomic neuropathy type 2A","type":"related"},{"name":"hereditary sensory and autonomic neuropathy type IIA","type":"exact"},{"name":"neuropathy, congenital sensory","type":"related"},{"name":"neuropathy, hereditary sensory and autonomic, type II","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type IIA","type":"exact"},{"name":"neuropathy, hereditary sensory radicular, autosomal recessive","type":"related"},{"name":"neuropathy, hereditary sensory, type 2A","type":"exact"},{"name":"neuropathy, progressive sensory, of children","type":"related"}],"termid":"MONDO:0024309","terms_by_termid":{"MONDO:0024309":null},"xrefs":{"Monarch":{"xref_id":"0024309"}}}


id: PBO:0043320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 2","termid":"PBO:0043320"}


id: PBO:0089448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose dehydrogenase Gcd1","termid":"PBO:0089448"}


id: PBO:0079164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 33","termid":"PBO:0079164"}


id: MOD:00479
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-glutamyl semialdehyde.","definition_xrefs":["PubMed:11120890","DeltaMass:351","PubMed:1680314","PubMed:9252331","Unimod:344#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"glutamyl semialdehyde","termid":"MOD:01440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl semialdehyde (Arg)","synonyms":[{"name":"Arg->GluSA","type":"related"},{"name":"Arginine oxidation to glutamic semialdehyde","type":"related"},{"name":"Oxidation of arginine (to glutamic acid)","type":"exact"}],"termid":"MOD:00479"}


id: MONDO:0004279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the ninth cranial (glossopharyngeal) nerve or its nuclei in the medulla. The nerve may be injured by diseases affecting the lower brain stem, floor of the posterior fossa, jugular foramen, or the nerve's extracranial course. Clinical manifestations include loss of sensation from the pharynx, decreased salivation, and syncope. Glossopharyngeal neuralgia refers to a condition that features recurrent unilateral sharp pain in the tongue, angle of the jaw, external auditory meatus and throat that may be associated with syncope. Episodes may be triggered by cough, sneeze, swallowing, or pressure on the tragus of the ear. (Adams et al., Principles of Neurology, 6th ed, p1390)","definition_xrefs":["MESH:D020435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"motor nerve neuritis","termid":"MONDO:0004004"},{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"glossopharyngeal motor neuropathy","secondary_identifiers":["DOID:7558","UMLS:C0751942","MEDGEN:155662","NCIT:C27212"],"synonyms":[{"name":"glossopharyngeal nerve motor peripheral neuropathy","type":"exact"},{"name":"motor peripheral neuropathy of glossopharyngeal nerve","type":"exact"}],"termid":"MONDO:0004279","xrefs":{"Monarch":{"xref_id":"0004279"}}}


id: PBO:0070419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPAP3 divergent transcript","termid":"PBO:0070419"}


id: GO:0043941
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[92609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"positive regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0045881"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"positively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043941","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: MONDO:0100165
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88251,88252],"is_not":false,"summary":null,"term":"MONDO:0100165"}]},"cv_name":"mondo","definition":"A rare autosomal recessive disorder characterized by severe hyperglycemia which requires insulin treatment soon after birth. The disorder results from a complete lack of glucokinase; total absence of basal insulin release was observed as well.","definition_xrefs":["OMIM:606176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0019254","MONDO:0004335","MONDO:0005015","MONDO:0006025"],"is_obsolete":false,"name":"permanent neonatal diabetes mellitus 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1717586","UMLS:C5393570"],"synonyms":[{"name":"PDMI","type":"related"},{"name":"PNDM1","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 1","type":"exact"},{"name":"diabetes mellitus, permanent, of infancy","type":"related"}],"termid":"MONDO:0100165","terms_by_termid":{"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0100165"}}}


id: GO:0038141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex containing two monomers of the tyrosine kinase receptor ERBB4 (also called HER4).","definition_xrefs":["GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ERBB4-ERBB4 complex","synonyms":[{"name":"ERBB4 homodimer","type":"exact"}],"termid":"GO:0038141"}


id: PBO:0070196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 120 pseudogene","termid":"PBO:0070196"}


id: MONDO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete midline cerebral malformation (obsolete MONDO:0017090)","secondary_identifiers":["Orphanet:268926"],"synonyms":[{"name":"Midline brain malformation","type":"exact"}],"termid":"MONDO:0017090","xrefs":{"Monarch":{"xref_id":"0017090"}}}


id: GO:1904018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculature development.","definition_xrefs":["GO_REF:0000058","PMID:21472453","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"positively_regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculature development","synonyms":[{"name":"activation of vascular system development","type":"related"},{"name":"activation of vasculature development","type":"narrow"},{"name":"positive regulation of vascular system development","type":"related"},{"name":"up regulation of vascular system development","type":"related"},{"name":"up regulation of vasculature development","type":"exact"},{"name":"up-regulation of vascular system development","type":"related"},{"name":"up-regulation of vasculature development","type":"exact"},{"name":"upregulation of vascular system development","type":"related"},{"name":"upregulation of vasculature development","type":"exact"}],"termid":"GO:1904018"}


id: PBO:0067100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 141, pseudogene","termid":"PBO:0067100"}


id: PBO:0042788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 162","termid":"PBO:0042788"}


id: PBO:0054384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1780","termid":"PBO:0054384"}


id: PBO:0054380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1776","termid":"PBO:0054380"}


id: MONDO:0975957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telangiectasia, impaired intellectual development, microcephaly, metaphyseal dysplasia, eye abnormalities, and short stature","secondary_identifiers":["OMIM:621056"],"termid":"MONDO:0975957","xrefs":{"Monarch":{"xref_id":"0975957"}}}


id: GO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein as part of a process of ubiquitin-dependent protein catabolism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0070647"],"is_obsolete":false,"name":"protein deubiquitination involved in ubiquitin-dependent protein catabolic process","termid":"GO:0071947"}


id: PBO:0074679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63","termid":"PBO:0074679"}


id: MONDO:0035548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial jak1 deficiency","secondary_identifiers":["Orphanet:574957","UMLS:C5680361","MEDGEN:1830105","ICD10CM:D84.8"],"synonyms":[{"name":"Autosomal recessive MSMD due to partial JAK1 deficiency","type":"exact"}],"termid":"MONDO:0035548","xrefs":{"Monarch":{"xref_id":"0035548"}}}


id: MONDO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TMPO gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete dilated cardiomyopathy 1T (obsolete MONDO:0000911)","secondary_identifiers":["MESH:C566052","DOID:0110452","OMIM:613740"],"synonyms":[{"name":"CMD1T","type":"exact"},{"name":"TMPO familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1T","type":"exact"},{"name":"cardiomyopathy, dilated, type 1T","type":"exact"},{"name":"dilated cardiomyopathy type 1T","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TMPO","type":"exact"},{"name":"moved to 115200","type":"related"}],"termid":"MONDO:0000911","xrefs":{"Monarch":{"xref_id":"0000911"}}}


id: GO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-glucosamine = di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + H+ + UDP.","definition_xrefs":["RHEA:31227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity","secondary_identifiers":["MetaCyc:NACGLCTRANS-RXN"],"termid":"GO:0051991"}


id: MONDO:0020609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, colton system (obsolete MONDO:0020609)","secondary_identifiers":["OMIM:110450"],"synonyms":[{"name":"BLOOD GROUP, COLTON SYSTEM","type":"related"},{"name":"CO","type":"related"},{"name":"Colton Blood Group System","type":"related"},{"name":"Colton-Null Phenotype","type":"related"},{"name":"aquaporin-1 deficiency","type":"exact"},{"name":"blood group, Colton","type":"exact"}],"termid":"MONDO:0020609","xrefs":{"Monarch":{"xref_id":"0020609"}}}


id: MONDO:1011886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy with cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:001606"],"termid":"MONDO:1011886","xrefs":{"Monarch":{"xref_id":"1011886"}}}


id: PBO:0086212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds Sin3p in a two-hybrid assay; STB6 has a paralog, STB2, that arose from the whole genome duplication","termid":"PBO:0086212"}


id: GO:0033950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the exohydrolysis of 1,4-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xyloglucan-specific exo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.155-RXN"],"synonyms":[{"name":"Cel74A","type":"related"},{"name":"[(1->6)-alpha-D-xylo]-(1->4)-beta-D-glucan exo-glucohydrolase activity","type":"related"}],"termid":"GO:0033950"}


id: PBO:0055885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit C","termid":"PBO:0055885"}


id: GO:0072649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-kappa due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-kappa production","secondary_identifiers":["GO:0072650"],"synonyms":[{"name":"IFN-kappa production","type":"exact"},{"name":"IFNK production","type":"exact"},{"name":"interferon-kappa secretion","type":"narrow"}],"termid":"GO:0072649"}


id: PBO:0111063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, antisense ubp8","termid":"PBO:0111063"}


id: PBO:0078225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-3","termid":"PBO:0078225"}


id: GO:0008088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"axo-dendritic transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"narrow"},{"name":"axonal transport","type":"narrow"},{"name":"axoplasmic transport","type":"narrow"}],"termid":"GO:0008088"}


id: MONDO:1012437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fluoroquinolone-induced retinal degeneration, non-human animal","termid":"MONDO:1011994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoroquinolone-induced retinal degeneration, domestic cat","secondary_identifiers":["OMIA:001707-9685"],"termid":"MONDO:1012437","xrefs":{"Monarch":{"xref_id":"1012437"}}}


id: PBO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMNL1 divergent transcript","termid":"PBO:0047707"}


id: MONDO:0017266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratinopathic ichthyosis","secondary_identifiers":["Orphanet:281103","icd11.foundation:992865924","MEDGEN:1393111","NANDO:2200987","GARD:21107","SCTID:724837004","NANDO:1200610","UMLS:C4511307"],"synonyms":[{"name":"KPI","type":"exact"}],"termid":"MONDO:0017266","xrefs":{"Monarch":{"xref_id":"0017266"}}}


id: GO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine catabolic process","termid":"GO:0006581"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine catabolic process in synaptic cleft","synonyms":[{"name":"acetylcholine breakdown in synaptic cleft","type":"exact"},{"name":"acetylcholine degradation in synaptic cleft","type":"exact"}],"termid":"GO:0001507"}


id: MONDO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adrenomyodystrophy is an extremely rare genetic endocrine disease characterized by primary adrenal insufficiency, dystrophic myopathy, hepatic steatosis, severe psychomotor delay, megalocornea, failure to thrive, chronic constipation, and terminal bladder ectasia which can lead to death. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:977"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomyodystrophy","secondary_identifiers":["MEDGEN:337494","icd11.foundation:46666832","SCTID:763311001","UMLS:C1846044","GARD:562","MESH:C538051","OMIM:300270"],"synonyms":[{"name":"adrenomyodystrophy","type":"exact"}],"termid":"MONDO:0010288","xrefs":{"Monarch":{"xref_id":"0010288"}}}


id: PBO:0003891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 Cyt1 (predicted)","termid":"PBO:0003891"}


id: PBO:0109010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 Y-linked pseudogene","termid":"PBO:0109010"}


id: PBO:0081190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 3","termid":"PBO:0081190"}


id: MONDO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III neuroepithelial neoplasm composed of neoplastic, mature ganglion cells and anaplastic glial cells. The anaplastic changes in the glial component and high MIB-1 and TP53 labeling indices may indicate aggressive behavior. However, the correlation of histological anaplasia with clinical outcome is inconsistent. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioglioma","termid":"MONDO:0016733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic ganglioglioma","secondary_identifiers":["ICDO:9505/3","GARD:10639","ONCOTREE:AGNG","Orphanet:251957","UMLS:C0431112","MEDGEN:140906","NCIT:C4717"],"synonyms":[{"name":"AGNG","type":"related"}],"termid":"MONDO:0016734","xrefs":{"Monarch":{"xref_id":"0016734"}}}


id: PBO:0030263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_erythromycin","termid":"PBO:0030263"}


id: GO:1900843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"regulation of monodictyphenone anabolism","type":"exact"},{"name":"regulation of monodictyphenone biosynthesis","type":"exact"},{"name":"regulation of monodictyphenone formation","type":"exact"},{"name":"regulation of monodictyphenone synthesis","type":"exact"}],"termid":"GO:1900843"}


id: PBO:0056728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm posterior bHLH transcription factor 1","termid":"PBO:0056728"}


id: PBO:0052706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 7","termid":"PBO:0052706"}


id: PBO:0050572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HR upstream open reading frame","termid":"PBO:0050572"}


id: PBO:0072854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 4","termid":"PBO:0072854"}


id: PBO:0079032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-5","termid":"PBO:0079032"}


id: GO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydroxypteridine = H+ + xanthine-8-carboxylate.","definition_xrefs":["RHEA:18097","EC:5.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydroxypteridine cycloisomerase activity","secondary_identifiers":["MetaCyc:TETRAHYDROXYPTERIDINE-CYCLOISOMERASE-RXN","KEGG_REACTION:R04154"],"synonyms":[{"name":"tetrahydroxypteridine lyase (isomerizing)","type":"related"}],"termid":"GO:0050329"}


id: PR:O74899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C576.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.17c","synonyms":[{"name":"Spom972h-SPCC576.17c","type":"exact"}],"termid":"PR:O74899"}


id: FYPO:0007552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein ubiquitination during cellular response to hydroxyurea","synonyms":[{"name":"normal protein ubiquitination during cellular response to HU","type":"exact"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein ubiquitinylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein ubiquitylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein/peptide ubiquitination during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007552"}


id: PBO:0065238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 6","termid":"PBO:0065238"}


id: PBO:0029930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribose_1-diphosphate_binding","termid":"PBO:0029930"}


id: PBO:0066969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 271","termid":"PBO:0066969"}


id: PBO:0077296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 38B","termid":"PBO:0077296"}


id: GO:0005851
data:
  {"annotated_genes":["SJAG_02307","SJAG_03678","SJAG_01576","SJAG_02471","SJAG_01659"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73677,74255,75686,78970,79232],"is_not":false,"summary":null,"term":"GO:0005851"}]},"cv_name":"cellular_component","definition":"A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon.","definition_xrefs":["PMID:9438375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01576":null,"SJAG_01659":null,"SJAG_02307":null,"SJAG_02471":null,"SJAG_03678":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"eIF-2B","type":"exact"},{"name":"eif2B","type":"exact"}],"termid":"GO:0005851","terms_by_termid":{"GO:0005851":null}}


id: PBO:0028043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_depolymerization_at_plus_end_at_cell_tip","termid":"PBO:0028043"}


id: MONDO:0018683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninherited ichthyosis associated with malignancy; autoimmune, inflammatory, nutritional, metabolic, infectious, and neurologic diseases; or medications.","definition_xrefs":["PMID:20643494"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ichthyosis vulgaris","termid":"MONDO:0024304"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired ichthyosis","secondary_identifiers":["UMLS:C0263386","ICD10CM:L85.0","Orphanet:454","GARD:476","MEDGEN:78092","MESH:C538175","icd11.foundation:1504032289","SCTID:8691004","NCIT:C112831"],"synonyms":[{"name":"acquired ichthyosis","type":"exact"},{"name":"acquired ichthyosis (disease)","type":"exact"},{"name":"fish scale disease, acquired","type":"related"},{"name":"ichthyosis acquisita","type":"exact"},{"name":"ichthyosis, acquired","type":"related"}],"termid":"MONDO:0018683","xrefs":{"Monarch":{"xref_id":"0018683"}}}


id: GO:0140420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heme from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"},{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"heme import into cell","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:0140420"}


id: PBO:0045282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 33","termid":"PBO:0045282"}


id: PBO:0120040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.1 OR nuclear and mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0120040"}


id: GO:0010625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency or rate of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"positive regulation of glial cell proliferation","termid":"GO:0060252"},{"relation_name":"positively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell proliferation","termid":"GO:0010625"}


id: PBO:0057329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520d","termid":"PBO:0057329"}


id: MONDO:0012346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 4","secondary_identifiers":["UMLS:C1853345","DOID:0111293","MEDGEN:342858","MESH:C565227","GARD:18662","OMIM:609800"],"synonyms":[{"name":"GEFSP4","type":"exact"},{"name":"Gefs+, type 4","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 4","type":"exact"}],"termid":"MONDO:0012346","xrefs":{"Monarch":{"xref_id":"0012346"}}}


id: GO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a bundle of His cell to a Purkinje myocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gap junction channel activity involved in bundle of His cell-Purkinje myocyte electrical coupling","termid":"GO:0086078"}


id: GO:1903922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23325791","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"is_a","term_name":"regulation of protein processing in phagocytic vesicle","termid":"GO:1903921"},{"relation_name":"negatively_regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"down regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"down regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"down regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"down regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"down regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"down regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"down regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein processing in phagosome","type":"exact"},{"name":"down-regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"down-regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"down-regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"down-regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"down-regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"down-regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"down-regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein processing in phagosome","type":"exact"},{"name":"downregulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"downregulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"downregulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"downregulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"downregulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"downregulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"downregulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein processing in phagosome","type":"exact"},{"name":"inhibition of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"inhibition of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"inhibition of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein maturation by peptide bond cleavage in phagosome","type":"narrow"},{"name":"inhibition of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein maturation by peptide bond hydrolysis in phagosome","type":"narrow"},{"name":"inhibition of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"inhibition of protein maturation by proteolysis in phagosome","type":"related"},{"name":"inhibition of protein processing in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein processing in phagosome","type":"narrow"},{"name":"negative regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"negative regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"negative regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"negative regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"negative regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"negative regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"negative regulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903922"}


id: PBO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 3","termid":"PBO:0050379"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + an all-trans-polyprenyl diphosphate + H+ = a 2-demethylmenaquinol + CO2 + diphosphate.","definition_xrefs":["RHEA:26478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate polyprenyltransferase activity","secondary_identifiers":["EC:2.5.1.74","MetaCyc:RXN-11047"],"synonyms":[{"name":"1,4-dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: GO:0005971
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78243,109227],"is_not":false,"summary":null,"term":"GO:0005971"}]},"cv_name":"cellular_component","definition":"An enzyme complex composed of 2-4 or more subunits, which usually contains nonheme iron and requires ATP for catalysis. Catalyzes the formation of 2'-deoxyribonucleoside diphosphate from ribonucleoside diphosphate, using either thioredoxin disulfide or glutaredoxin disulfide as an acceptor.","definition_xrefs":["PMID:21336276","PMID:10716984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNR complex","type":"exact"},{"name":"ribonucleotide reductase complex","type":"exact"}],"termid":"GO:0005971","terms_by_termid":{"GO:0005971":null}}


id: PBO:0080521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 3, pseudogene","termid":"PBO:0080521"}


id: PR:Q10196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC11C11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11C11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.05","synonyms":[{"name":"Spom972h-SPBC11C11.05","type":"exact"}],"termid":"PR:Q10196"}


id: MONDO:1012417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch with subclavian artery and ligamentum arteriosum, non-human animal","termid":"MONDO:1011649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch with subclavian artery and ligamentum arteriosum, dog","secondary_identifiers":["OMIA:001570-9615"],"termid":"MONDO:1012417","xrefs":{"Monarch":{"xref_id":"1012417"}}}


id: MONDO:0007693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrichosis cubiti is a rare hair anomaly characterized by symmetrical, congenital or early-onset, bilateral hypertrychosis localized on the externsor surfaces of the upper extremities (especially the elbows). Short stature, or other abnormalities, such as developmental delay, facial anomalies and intellectual disability, may or may not be associated.","definition_xrefs":["Orphanet:2220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypertrichosis cubiti-short stature syndrome","secondary_identifiers":["MESH:C535618","MedDRA:10068636","UMLS:C4025295","GARD:143","OMIM:139600","MEDGEN:870835"],"synonyms":[{"name":"MacDermot-Patton-Williams syndrome","type":"exact"},{"name":"hairy elbows","type":"exact"},{"name":"hairy elbows syndrome","type":"exact"},{"name":"hypertrichosis cubiti","type":"related"}],"termid":"MONDO:0007693","xrefs":{"Monarch":{"xref_id":"0007693"}}}


id: PR:Q04800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric reductase transmembrane component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.09c","secondary_identifiers":["UniProtKB:Q04800"],"synonyms":[{"name":"Spom972h-NOX1","type":"exact"},{"name":"ferric-chelate reductase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q04800"}


id: PBO:0070881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 13","termid":"PBO:0070881"}


id: PBO:0086593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression downregulated by treatment with 8-methoxypsoralen plus UVA irradiation; not an essential gene; YGR273C has a paralog, YMR295C, that arose from the whole genome duplication","termid":"PBO:0086593"}


id: PBO:0071775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 3","termid":"PBO:0071775"}


id: PBO:0083763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein associated with microtubules and SPBs; component of the kinetochore sub-complex COMA (Ctf19p, Okp1p, Mcm21p, Ame1p); involved in spindle checkpoint maintenance; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-U and fission yeast Mis17; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0083763"}


id: MONDO:0016812
data:
  {"annotated_genes":["SJAG_03098","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[86879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"Dopa-responsive dystonia (DRD) describes a group of neurometabolic disorders characterized by dystonia that typically shows diurnal fluctuations, that responds excellently to levodopa (L-dopa) and that is comprised of autosomal dominant dopa-responsive dystonia (DYT5a), autosomal recessive dopa-responsive dystonia (DYT5b) and dopa responsive dystonia due to sepiapterin reductase (SR) deficiency.","definition_xrefs":["Orphanet:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12144","icd11.foundation:1534901505","NANDO:1200516","MESH:C538007","NANDO:2200885","SCTID:230332007","NCIT:C116719"],"synonyms":[{"name":"DYT-GCH1 (subtype)","type":"related"},{"name":"DYT-SPR (subtype)","type":"related"},{"name":"DYT-TH (subtype)","type":"related"},{"name":"DYT5","type":"related"},{"name":"DYT5 dystonia","type":"exact"},{"name":"HPD with diurnal fluctuation","type":"exact"},{"name":"Segawa's disease","type":"exact"},{"name":"dopa-responsive dystonia","type":"exact"},{"name":"hereditary progressive dystonia with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0016812","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0016812"}}}


id: PR:O74890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04935","PRO:DNx","PANTHER:PTHR11766:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.06c","secondary_identifiers":["UniProtKB:O74890"],"synonyms":[{"name":"Spom972h-YARS2","type":"exact"},{"name":"TyrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyrosyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74890"}


id: PBO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 OG-Fe(II) oxygenase superfamily protein Ofd2","termid":"PBO:0002919"}


id: GO:0021799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12626695","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex cell migration","termid":"GO:0021795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"}


id: PBO:0056128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal trafficking regulator","termid":"PBO:0056128"}


id: MONDO:0700084
data:
  {"annotated_genes":["SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[87773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[87778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the GMPPB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"myopathy caused by variation in GMPPB","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"GMPPB-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in GMPPB","type":"exact"}],"termid":"MONDO:0700084","terms_by_termid":{"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0700084"}}}


id: PBO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 29","termid":"PBO:0070356"}


id: PBO:0054038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1374","termid":"PBO:0054038"}


id: SO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons AAT and AAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine","synonyms":[{"name":"Asn","type":"exact"},{"name":"N","type":"exact"}],"termid":"SO:0001449"}


id: MONDO:0011449
data:
  {"annotated_genes":["SJAG_05182","SJAG_05175","SJAG_04706","SJAG_02139","SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87195,87196,87197,87198,87199],"is_not":false,"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","definition":"Salla disease is the mildest form of the free sialic acid storage disorders, which primarily affect the nervous system. Infants with Salla disease typically begin to experience poor muscle tone (hypotonia) during the first year of life,followed by slowly progressive neurological problems. Signs and symptoms include intellectual disability and developmental delay; seizures ; ataxia ; muscle spasticity; and involuntary slow movements of the limbs (athetosis). About one-third of affected children learn to walk. It is caused by mutations in the SLC17A5 gene and is inherited in an autosomal recessive manner. Treatment is generally symptomatic and supportive.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"Salla disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200582","Orphanet:309334","MEDGEN:203368","MedDRA:10067531","NCIT:C85067","UMLS:C1096903","NANDO:2201294","SCTID:87074006","NANDO:1200149","GARD:4754","OMIM:604369"],"synonyms":[{"name":"SD","type":"related"},{"name":"Salla disease","type":"exact"},{"name":"sialic acid storage disease","type":"exact"},{"name":"sialuria, Finnish type","type":"related"}],"termid":"MONDO:0011449","terms_by_termid":{"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0011449"}}}


id: GO:0051129
data:
  {"annotated_genes":["SJAG_03327","SJAG_02392","SJAG_00266","SJAG_04287","SJAG_03048","SJAG_02592","SJAG_00369","SJAG_03072","SJAG_02795","SJAG_03438","SJAG_00823","SJAG_02514","SJAG_00364","SJAG_03455","SJAG_02700","SJAG_01386","SJAG_00279","SJAG_04999","SJAG_03581","SJAG_02336","SJAG_00883","SJAG_02838","SJAG_01837","SJAG_02169","SJAG_04884","SJAG_01464","SJAG_01716","SJAG_01297","SJAG_03508","SJAG_04943","SJAG_00460","SJAG_04203","SJAG_00229","SJAG_04369","SJAG_01082","SJAG_03681","SJAG_01790","SJAG_04455","SJAG_04126","SJAG_00845","SJAG_03592","SJAG_06270","SJAG_03255","SJAG_05978","SJAG_01825","SJAG_02723","SJAG_03353","SJAG_03591","SJAG_01330","SJAG_02451","SJAG_00526","SJAG_04259","SJAG_00304","SJAG_01894","SJAG_01679","SJAG_01680","SJAG_00855","SJAG_01993","SJAG_04638","SJAG_04699","SJAG_01787","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80930,77320,94217,81987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[115795,117922,105842,110234,113964,109204,116288,92604,101518],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[116515,108287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[90937,116278,118080,108588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[103743,108289,111898,101360,117579,116518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[76274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[100199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[96486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[119980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[118326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[108427,103991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[104314,112760,92649,96267,97765,105644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96095],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[108625,79125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[109949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[110471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[107007,101520,109072,74671,109515,94736,117925,112161,94821,109205,93627,95350,97550,103215,92608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[108552,93636,109381,108328,108230,117357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[103400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[115800],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[118700],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[103283],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"negatively_regulates","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00266":null,"SJAG_00279":null,"SJAG_00304":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00460":null,"SJAG_00526":null,"SJAG_00823":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01716":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02392":null,"SJAG_02451":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02723":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03126":null,"SJAG_03255":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03455":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04203":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04369":null,"SJAG_04455":null,"SJAG_04638":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04943":null,"SJAG_04999":null,"SJAG_05978":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular component organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell organization","type":"exact"},{"name":"down-regulation of cell organization","type":"exact"},{"name":"downregulation of cell organization","type":"exact"},{"name":"inhibition of cell organization","type":"narrow"},{"name":"negative regulation of cell organisation","type":"related"},{"name":"negative regulation of cellular component organization and biogenesis","type":"related"}],"termid":"GO:0051129","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0031030":null,"GO:0034316":null,"GO:0045128":null,"GO:0045806":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0060906":null,"GO:0061188":null,"GO:0061192":null,"GO:0090258":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:1905757":null,"GO:2000432":null,"GO:2000816":null}}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: MONDO:0011728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary twitching of the eyelid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign essential blepharospasm","secondary_identifiers":["MESH:D001764","SCTID:59026006","DOID:529","UMLS:C2930898","ICD9:333.81","MEDGEN:419660","ICD10CM:G24.5","icd11.foundation:1127235959"],"synonyms":[{"name":"BEB","type":"related"},{"name":"benign essential blepharospasm","type":"exact"},{"name":"blepharospasm","type":"exact"},{"name":"blepharospasm, benign essential","type":"related"}],"termid":"MONDO:0011728","xrefs":{"Monarch":{"xref_id":"0011728"}}}


id: GO:0160219
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92284,106322],"is_not":false,"summary":null,"term":"GO:0160219"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding the cortical endoplasmic reticulum.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network membrane","termid":"GO:0098826"},{"relation_name":"part_of","term_name":"cortical endoplasmic reticulum","termid":"GO:0032541"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005789","GO:0005938","GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"cortical endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160219","terms_by_termid":{"GO:0160219":null}}


id: PBO:0002969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002969"}


id: _global:may_be_merged_into
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"may_be_merged_into","termid":"_global:may_be_merged_into","xrefs":{"Monarch":{"xref_id":"may_be_merged_into"}}}


id: FYPO:0006432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which vesicle-mediated transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal vesicle-mediated transport during vegetative growth","synonyms":[{"name":"normal vesicle-mediated protein transport during vegetative growth","type":"narrow"},{"name":"normal vesicle-mediated transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006432"}


id: PBO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type X alpha 1 chain","termid":"PBO:0043576"}


id: PR:Q10429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14418:SF5","OMA:SCHPO04699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.03","secondary_identifiers":["UniProtKB:Q10429"],"synonyms":[{"name":"CAPG homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCAPG","type":"exact"},{"name":"p100 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q10429"}


id: GO:1901531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hypochlorite.","definition_xrefs":["PMID:22223481","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hypochlorite binding","termid":"GO:1901531"}


id: FYPO:0001157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium with higher than standard pH. Standard S. pombe growth media are approximately pH 5.6.","definition_xrefs":["PomBase:mah","PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth rate at high pH","synonyms":[{"name":"enhanced growth at high pH","type":"related"},{"name":"fast cell population growth at high pH","type":"exact"},{"name":"increased cell population growth rate at high pH during mitotic cell cycle","type":"related"},{"name":"increased cell population growth rate at high pH during vegetative growth","type":"exact"},{"name":"increased cell population proliferation at high pH","type":"related"},{"name":"increased cell proliferation at high pH","type":"related"}],"termid":"FYPO:0001157"}


id: GO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid","termid":"GO:0071396"}


id: PBO:0058635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6767","termid":"PBO:0058635"}


id: GO:0046076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dTTP, deoxyribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dTTP metabolic process","termid":"GO:0046075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dTTP catabolic process","synonyms":[{"name":"dTTP breakdown","type":"exact"},{"name":"dTTP catabolism","type":"exact"},{"name":"dTTP degradation","type":"exact"}],"termid":"GO:0046076"}


id: PBO:0054952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2366","termid":"PBO:0054952"}


id: PBO:0088865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40","termid":"PBO:0088865"}


id: PR:O94248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A midasin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04871","PANTHER:PTHR22908:SF14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.08","secondary_identifiers":["UniProtKB:O94248"],"synonyms":[{"name":"MIDAS-containing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MDN1","type":"exact"}],"termid":"PR:O94248"}


id: PBO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2533","termid":"PBO:0055114"}


id: MONDO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with epilepsy as a major feature (obsolete MONDO:0018287)","secondary_identifiers":["Orphanet:371071"],"synonyms":[{"name":"CDG with epilepsy as a major feature","type":"exact"}],"termid":"MONDO:0018287","xrefs":{"Monarch":{"xref_id":"0018287"}}}


id: MONDO:0018647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"secondary sclerosing cholangitis","secondary_identifiers":["SCTID:197442005","MEDGEN:586530","GARD:21869","Orphanet:447774","UMLS:C0400978"],"termid":"MONDO:0018647","xrefs":{"Monarch":{"xref_id":"0018647"}}}


id: PBO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 6 (inactive)","termid":"PBO:0047654"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: SO:1001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_predicted","synonyms":[{"name":"CDS predicted","type":"exact"}],"termid":"SO:1001254"}


id: PR:O14108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein eta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.10","synonyms":[{"name":"Spom972h-eta2","type":"exact"}],"termid":"PR:O14108"}


id: PBO:0084855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; not essential for mitochondrial translation","termid":"PBO:0084855"}


id: MONDO:0014885
data:
  {"annotated_genes":["SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87960],"is_not":false,"summary":null,"term":"MONDO:0014885"}]},"cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the AP3D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617050","GARD:16180","MEDGEN:934713","Orphanet:664511","UMLS:C4310746"],"synonyms":[{"name":"AP3D1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10; HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in AP3D1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 10","type":"exact"}],"termid":"MONDO:0014885","terms_by_termid":{"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0014885"}}}


id: PBO:0028266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitochondrial_RNA_level","termid":"PBO:0028266"}


id: PR:G2TRR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal signal peptidase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.22","synonyms":[{"name":"Spom972h-new19","type":"exact"}],"termid":"PR:G2TRR4"}


id: MONDO:0003872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous cystadenoma of the ovary characterized by the presence of small papillary projections in the inner surface of the cysts.","definition_xrefs":["NCIT:C7278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"ovarian papillary tumor","termid":"MONDO:0003813"},{"relation_name":"is_a","term_name":"ovarian cystadenoma","termid":"MONDO:0005183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian papillary cystadenoma","secondary_identifiers":["DOID:6405","MEDGEN:233276","UMLS:C1335175"],"synonyms":[{"name":"ovarian papillary cystadenoma","type":"exact"}],"termid":"MONDO:0003872","xrefs":{"Monarch":{"xref_id":"0003872"}}}


id: MONDO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short rib-polydactyly syndrome type 5 (obsolete MONDO:0044680)","termid":"MONDO:0044680","xrefs":{"Monarch":{"xref_id":"0044680"}}}


id: PBO:0004402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-diacylglycerol acyltransferase Plh1","termid":"PBO:0004402"}


id: MONDO:0031016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic disorder of sex development (obsolete MONDO:0031016)","secondary_identifiers":["Orphanet:325690"],"termid":"MONDO:0031016","xrefs":{"Monarch":{"xref_id":"0031016"}}}


id: GO:1901952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["PMID:23358451","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle transport along microtubule","termid":"GO:1901609"},{"relation_name":"is_a","term_name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"},{"relation_name":"is_a","term_name":"negative regulation of dense core granule transport","termid":"GO:1904810"},{"relation_name":"negatively_regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterograde dense core granule transport","synonyms":[{"name":"down regulation of anterograde dense core granule transport","type":"exact"},{"name":"down-regulation of anterograde dense core granule transport","type":"exact"},{"name":"downregulation of anterograde dense core granule transport","type":"exact"},{"name":"inhibition of anterograde dense core granule transport","type":"narrow"}],"termid":"GO:1901952"}


id: FYPO:0000358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells do not form mating projections.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"shmoo absent","synonyms":[{"name":"absent mating projection morphology","type":"exact"},{"name":"mating projection absent","type":"exact"},{"name":"mating projection morphology: absent","type":"related"}],"termid":"FYPO:0000358"}


id: FYPO:0007374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in centromeric regions is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone methylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone methylation during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at centromere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007374"}


id: MONDO:0008129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia, familial total, with iris transillumination","secondary_identifiers":["MEDGEN:371665","OMIM:165098","UMLS:C1833836","MESH:C563499"],"synonyms":[{"name":"ophthalmoplegia, familial total, with iris transillumination","type":"exact"}],"termid":"MONDO:0008129","xrefs":{"Monarch":{"xref_id":"0008129"}}}


id: FYPO:0006559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle disassembly begins later than normal.","definition_xrefs":["GO:0051228","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"delayed onset of mitotic spindle disassembly","synonyms":[{"name":"delayed mitotic spindle disassembly","type":"exact"},{"name":"delayed onset of mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"delayed onset of spindle disassembly during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006559"}


id: MONDO:0007935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominantly inherited cystoid macular edema manifesting with macular atrophy, strabismus and, sometimes, pericentral retinitis pigmentosa. It is associated with a poor visual prognosis.","definition_xrefs":["Orphanet:75381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular retinal edema","termid":"MONDO:0003005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cystoid macular edema","secondary_identifiers":["GARD:16694","DOID:4447","MEDGEN:7435","NCIT:C34794","ICD10CM:H35.5","OMIM:153880","UMLS:C0024440","SCTID:312921000"],"synonyms":[{"name":"DCMD","type":"exact"},{"name":"Mddc","type":"related"},{"name":"autosomal dominant cystoid macular edema","type":"exact"},{"name":"autosomal dominant cystoid macular oedema","type":"exact"},{"name":"cystoid macular dystrophy","type":"related"},{"name":"familial macular edema","type":"exact"},{"name":"familial macular oedema","type":"exact"},{"name":"macular dystrophy, dominant cystoid","type":"related"},{"name":"macular edema, cystoid","type":"related"}],"termid":"MONDO:0007935","xrefs":{"Monarch":{"xref_id":"0007935"}}}


id: GO:0106419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-lipoyl-L-lysyl-[protein] + H2O + NAD+ = 2''-O-lipoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:63640","PMID:25525879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"NAD-dependent protein lipoamidase activity","secondary_identifiers":["MetaCyc:RXN-22964","EC:2.3.1.313"],"termid":"GO:0106419"}


id: PBO:0068441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 15, pseudogene","termid":"PBO:0068441"}


id: GO:0032392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a transformation is induced in the geometry of a DNA double helix, resulting in a change in twist, writhe, or both, but with no change in linking number. Includes the unwinding of double-stranded DNA by helicases.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA geometric change","termid":"GO:0032392"}


id: PBO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A1","termid":"PBO:0046948"}


id: GO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment in which the cell is designated to follow a developmental path, unless they receive extrinsic cues that direct an alternative fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification","termid":"GO:0001708"}


id: PBO:0040792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BFSP2 antisense RNA 1","termid":"PBO:0040792"}


id: PBO:0075104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 153","termid":"PBO:0075104"}


id: PBO:0076630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 X-linked","termid":"PBO:0076630"}


id: GO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}


id: PBO:0119741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex subunit Get4","termid":"PBO:0119741"}


id: GO:1904907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion, telomeric.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:26373281","GOC:BHF_telomere","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, telomeric","termid":"GO:0099403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion at telomere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at telomere at mitosis","type":"exact"},{"name":"regulation of maintenance of telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:1904907"}


id: MONDO:0016386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypogonadotropic hypogonadism (with primary amenorrhea and lack of secondary sexual development) and retinitis pigmentosa. It has been described in two sisters born to nonconsanguineous parents.","definition_xrefs":["Orphanet:2235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism-retinitis pigmentosa syndrome","secondary_identifiers":["UMLS:C2931722","MESH:C538075","MEDGEN:419479","GARD:1234"],"synonyms":[{"name":"Chang-Davidson-Carlson syndrome","type":"exact"}],"termid":"MONDO:0016386","xrefs":{"Monarch":{"xref_id":"0016386"}}}


id: GO:0035964
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119772,73021],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of a Golgi membrane, resulting in formation of a COPI-coated vesicle.","definition_xrefs":["GOC:br","PMID:10052452","PMID:17041781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"COPI-coated vesicle budding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI vesicle budding","type":"exact"}],"termid":"GO:0035964","terms_by_termid":{"GO:0048205":null}}


id: MONDO:0009733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome within the first three motnhs of life, characterized initially by increased mesangial matrix, with or without hypertrophy and hyperplasia of podocytes, and eventual glomerular sclerosis.","definition_xrefs":["NCIT:C121198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 4","secondary_identifiers":["MEDGEN:462918","OMIM:256370","UMLS:C3151568","DOID:0080383","GARD:15210"],"synonyms":[{"name":"DMS","type":"related"},{"name":"NPHS4","type":"related"},{"name":"WT1 nephrotic syndrome","type":"exact"},{"name":"congenital nephrotic syndrome - diffuse mesangial sclerosis","type":"exact"},{"name":"diffuse isolated mesangial sclerosis","type":"related"},{"name":"diffuse mesangial sclerosis","type":"related"},{"name":"familial mesangial sclerosis","type":"related"},{"name":"isolated diffuse mesangial sclerosis","type":"related"},{"name":"mesangial sclerosis, diffuse","type":"related"},{"name":"nephrotic syndrome caused by mutation in WT1","type":"exact"},{"name":"nephrotic syndrome, early onset with diffuse mesangial sclerosis","type":"related"},{"name":"nephrotic syndrome, type 4","type":"exact"}],"termid":"MONDO:0009733","xrefs":{"Monarch":{"xref_id":"0009733"}}}


id: MONDO:0016484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by congenital, bilateral sensorineural hearing loss that is mild to moderate in the low frequencies and severe to profound in the higher frequencies, no abnormalities in the vestibular system, and retinitis pigmentosa.","definition_xrefs":["NCIT:C126328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome","termid":"MONDO:0019501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 2","secondary_identifiers":["DOID:0110827","GARD:5440","UMLS:C0339534","ICD10CM:H35.5","MEDGEN:83288","NANDO:1200943","Orphanet:231178","icd11.foundation:33632175","SCTID:232058008"],"synonyms":[{"name":"USH2","type":"exact"},{"name":"Usher syndrome type 2","type":"exact"}],"termid":"MONDO:0016484","xrefs":{"Monarch":{"xref_id":"0016484"}}}


id: PBO:0062660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 1","termid":"PBO:0062660"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: GO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an S-alkyl-L-cysteine S-oxide = an alkyl sulfenate + 2-aminoacrylate.","definition_xrefs":["EC:4.4.1.4","MetaCyc:ALLIIN-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"alliin lyase activity","secondary_identifiers":["RHEA:20141"],"synonyms":[{"name":"L-cysteine sulfoxide lyase activity","type":"related"},{"name":"S-alkyl-L-cysteine S-oxide alkyl-sulfenate-lyase (2-aminoacrylate-forming)","type":"related"},{"name":"S-alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alkylcysteine sulfoxide lyase activity","type":"related"},{"name":"alliin alkyl-sulfenate-lyase activity","type":"related"},{"name":"alliinase activity","type":"related"},{"name":"cysteine sulfoxide lyase activity","type":"related"},{"name":"cysteine sulphoxide lyase activity","type":"related"}],"termid":"GO:0047654"}


id: GO:2000200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of ribosomal subunit export from nucleus","synonyms":[{"name":"regulation of ribosomal subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal subunit-nucleus export","type":"exact"},{"name":"regulation of ribosome export from nucleus","type":"related"}],"termid":"GO:2000200"}


id: MONDO:0001889
data:
  {"annotated_genes":["SJAG_04738","SJAG_00377","SJAG_03698","SJAG_04114","SJAG_03720","SJAG_00103","SJAG_04703","SJAG_04950","SJAG_04148","SJAG_02643","SJAG_03418","SJAG_02339","SJAG_03051","SJAG_02954","SJAG_02294","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[88808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976232"},{"annotations":[87457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88253,88254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88442,88443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"The inability of the ovaries to function.","definition_xrefs":["NCIT:C113351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02643":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"ovarian dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009003","DOID:1414","UMLS:C0154208","icd11.foundation:1801368748","SCTID:37102008","ICD9:256.39","MEDGEN:509544","ICD9:256.8","ICD9:256.9","ICD10CM:E28","ICD9:256.3"],"synonyms":[{"name":"ovarian failure","type":"exact"},{"name":"ovarian hypofunction","type":"exact"},{"name":"ovarian insufficiency","type":"exact"}],"termid":"MONDO:0001889","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:0976232":null},"xrefs":{"Monarch":{"xref_id":"0001889"}}}


id: GO:0034966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small nucleolar RNA (snoRNA) transcript that resides within, and is processed from, the intron of a pre-mRNA into a mature box H/ACA snoRNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intronic snoRNA processing","termid":"GO:0031070"},{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA processing","termid":"GO:0034964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"intronic box H/ACA snoRNA processing","termid":"GO:0034966"}


id: GO:0014891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle adaptation","termid":"GO:0014888"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle atrophy","termid":"GO:0014891"}


id: PBO:0034553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CRE_promoter","termid":"PBO:0034553"}


id: PBO:0060876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 1","termid":"PBO:0060876"}


id: MONDO:0004663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the colon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"intestine carcinoma in situ","termid":"MONDO:0004698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon carcinoma in situ","secondary_identifiers":["MEDGEN:56334","DOID:8826","NCIT:C3638","UMLS:C0154061","ICD9:230.3","SCTID:92568009","ICD10CM:D01.0"],"synonyms":[{"name":"carcinoma in situ of colon","type":"exact"},{"name":"carcinoma in situ of the colon","type":"exact"},{"name":"colon cancer stage 0","type":"exact"},{"name":"colon carcinoma in situ","type":"exact"},{"name":"colon in situ carcinoma","type":"exact"},{"name":"colonic carcinoma in situ","type":"exact"},{"name":"stage 0 carcinoma of colon","type":"exact"},{"name":"stage 0 carcinoma of the colon","type":"exact"},{"name":"stage 0 colon cancer","type":"exact"},{"name":"stage 0 colon cancer aJCC v6","type":"exact"},{"name":"stage 0 colon cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 colon cancer aJCC v7","type":"exact"},{"name":"stage 0 colon carcinoma","type":"exact"},{"name":"stage 0 colonic carcinoma","type":"exact"}],"termid":"MONDO:0004663","xrefs":{"Monarch":{"xref_id":"0004663"}}}


id: PBO:0066810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 109","termid":"PBO:0066810"}


id: GO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed germinates before being shed from the parent plant.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination on parent plant","synonyms":[{"name":"non-vegetative vivipary","type":"broad"},{"name":"pre-harvest sprouting","type":"exact"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048623"}


id: PBO:0075373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 10","termid":"PBO:0075373"}


id: PBO:0078399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 9-1","termid":"PBO:0078399"}


id: PBO:0081000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 38","termid":"PBO:0081000"}


id: PBO:0065832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7B, member RAS oncogene family","termid":"PBO:0065832"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in pericardium morphogenesis (obsolete GO:2000166)","termid":"GO:2000166"}


id: PBO:0058784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7153","termid":"PBO:0058784"}


id: PBO:0044711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 2","termid":"PBO:0044711"}


id: PBO:0074129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 1 pseudogene 1","termid":"PBO:0074129"}


id: PR:O59793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bis1 gene.","definition_xrefs":["UniProtKB:O59793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein bis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.02c","synonyms":[{"name":"Spom972h-bis1","type":"exact"}],"termid":"PR:O59793"}


id: PBO:0043531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COBL pseudogene 1","termid":"PBO:0043531"}


id: PBO:0030197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_brefeldin_A","termid":"PBO:0030197"}


id: MONDO:0020627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epileptic encephalopathy, infantile or early childhood (obsolete MONDO:0020627)","secondary_identifiers":["OMIMPS:617711"],"termid":"MONDO:0020627","xrefs":{"Monarch":{"xref_id":"0020627"}}}


id: PBO:0056933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1-1","termid":"PBO:0056933"}


id: PBO:0084451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with internal repeats) family","termid":"PBO:0084451"}


id: GO:0043818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + precorrin-3A = H2O + NAD+ + precorrin-3B.","definition_xrefs":["EC:1.14.13.83","RHEA:17293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"precorrin-3B synthase activity","secondary_identifiers":["KEGG_REACTION:R05217","MetaCyc:R321-RXN"],"synonyms":[{"name":"CobG","type":"related"},{"name":"precorrin-3A,NADH:oxygen oxidoreductase (20-hydroxylating)","type":"exact"},{"name":"precorrin-3X synthase activity","type":"related"}],"termid":"GO:0043818"}


id: GO:0032204
data:
  {"annotated_genes":["SJAG_03624","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[78831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02194":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"regulation of telomere maintenance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032204","terms_by_termid":{"GO:0032210":null,"GO:0032215":null}}


id: GO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid glucose ester + UDP.","definition_xrefs":["RHEA:62316","MetaCyc:RXN-11659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (ester-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052639"}


id: PBO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome oxidase biogenesis Cmc1 (predicted)","termid":"PBO:0004056"}


id: MONDO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laryngo-tracheo-esophageal cleft (LC) is a congenital malformation characterized by an abnormal, posterior, sagittal communication between the larynx and the pharynx, possibly extending downward between the trachea and the esophagus.","definition_xrefs":["Orphanet:2004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft","secondary_identifiers":["icd11.foundation:271795917","MESH:C537875","GARD:3188","NCIT:C98622","SCTID:232461002"],"synonyms":[{"name":"LC","type":"exact"},{"name":"LTEC","type":"exact"},{"name":"Larnygeotracheoesophageal cleft","type":"exact"},{"name":"congenital cleft larynx","type":"exact"},{"name":"laryngeal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal diastema","type":"exact"},{"name":"tracheal cleft","type":"exact"}],"termid":"MONDO:0016060","xrefs":{"Monarch":{"xref_id":"0016060"}}}


id: MONDO:0006885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006885 (obsolete MONDO:0006885)","termid":"MONDO:0006885","xrefs":{"Monarch":{"xref_id":"0006885"}}}


id: GO:0072164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a mesonephric tubule over time, from its initial formation to the mature structure. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"mesonephric epithelium development","termid":"GO:0072163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule development","termid":"GO:0072164"}


id: PBO:0071207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 48","termid":"PBO:0071207"}


id: PBO:0027469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_NAD(P)H_oxidase_activity","termid":"PBO:0027469"}


id: GO:0035337
data:
  {"annotated_genes":["SJAG_03909","SJAG_03471","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[79056,80661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0055086","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty-acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA metabolic process","type":"exact"},{"name":"fatty-acyl-CoA metabolism","type":"exact"}],"termid":"GO:0035337","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: MONDO:1011236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, water buffalo","secondary_identifiers":["OMIA:000649-89462"],"termid":"MONDO:1011236","xrefs":{"Monarch":{"xref_id":"1011236"}}}


id: PBO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component I (predicted)","termid":"PBO:0005634"}


id: PBO:0035838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035838"}


id: GO:0009943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial axis specification","synonyms":[{"name":"adaxial/abaxial determination","type":"related"}],"termid":"GO:0009943"}


id: PBO:0048193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit beta 1","termid":"PBO:0048193"}


id: PBO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc6","termid":"PBO:0090620"}


id: GO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a freezing stimulus, temperatures below 0 degrees Celsius.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to freezing","synonyms":[{"name":"antifreeze activity","type":"related"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0050826"}


id: PBO:0057088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 184","termid":"PBO:0057088"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74382],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["EC:1.1.1.14","PMID:13373783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: PBO:0087790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; catalyzes sumoylation of Yku70p/80p and Sir4p promoting telomere anchoring to the nuclear envelope and regulating telomerase activity; DNA-bound form catalyzes a DNA-damaged triggered sumoylation wave resulting in multisite modification of several DNA repair proteins, enhancing interactions between these proteins and accelerating repair; sumoylates Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; role in telomere length maintenance","termid":"PBO:0087790"}


id: GO:0045053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The retention of proteins within the Golgi apparatus. Golgi-localized carbohydrate-modifying enzymes have a short N-terminal domain that faces the cytosol, a single transmembrane alpha helix, and a large C-terminal domain that faces the Golgi lumen and that contains the catalytic site. How the membrane-spanning alpha helix in a Golgi enzyme causes its localization and prevents its movement to the plasma membrane is not known.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein retention in Golgi apparatus","synonyms":[{"name":"maintenance of protein location in Golgi apparatus","type":"related"},{"name":"protein-Golgi retention","type":"exact"},{"name":"retention of protein in Golgi","type":"exact"}],"termid":"GO:0045053"}


id: FYPO:0006442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the proteolytic processing of sterol regulatory element binding protein (SREBP) into its transcriptionally active form is activated continuously. Normally, SREBP is cleaved only in response to altered levels of one or more lipids.","definition_xrefs":["GO:0035103","PMID:18503029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"constitutively activated sterol regulatory element binding protein cleavage","synonyms":[{"name":"constitutively activated SREBP cleavage","type":"exact"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during mitotic cell cycle","type":"related"},{"name":"constitutively activated sterol regulatory element binding protein cleavage during vegetative growth","type":"exact"}],"termid":"FYPO:0006442"}


id: PBO:0046084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 9","termid":"PBO:0046084"}


id: FYPO:0001205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alpha-glucosidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished alpha-glucosidase activity","synonyms":[{"name":"alpha-glucosidase activity abolished","type":"exact"}],"termid":"FYPO:0001205"}


id: FYPO:0005103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"curved elongated vegetative cell","synonyms":[{"name":"curved elongated cell","type":"exact"},{"name":"curved elongated cell during vegetative growth","type":"exact"},{"name":"curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005103"}


id: GO:0030821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP catabolic process (obsolete GO:0030821)","synonyms":[{"name":"down regulation of cAMP catabolic process","type":"exact"},{"name":"down-regulation of cAMP catabolic process","type":"exact"},{"name":"downregulation of cAMP catabolic process","type":"exact"},{"name":"inhibition of cAMP catabolic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP catabolic process","type":"exact"},{"name":"negative regulation of 3',5' cAMP catabolism","type":"exact"},{"name":"negative regulation of 3',5'-cAMP catabolic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP catabolism","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate catabolic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate catabolism","type":"exact"},{"name":"negative regulation of cAMP breakdown","type":"exact"},{"name":"negative regulation of cAMP catabolism","type":"exact"},{"name":"negative regulation of cAMP degradation","type":"exact"},{"name":"negative regulation of cyclic AMP catabolic process","type":"exact"},{"name":"negative regulation of cyclic AMP catabolism","type":"exact"}],"termid":"GO:0030821"}


id: PBO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZF1 antisense RNA 1","termid":"PBO:0047519"}


id: PBO:0070620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 4","termid":"PBO:0070620"}


id: PBO:0091373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone-related heme binding protein, Aim18","termid":"PBO:0091373"}


id: PBO:0089186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mia40-Erv1 disulfide relay system sulfhydryl oxidase subunit Erv1","termid":"PBO:0089186"}


id: MOD:02017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with an arachidonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"arachidonoylated residue","termid":"MOD:02018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-arachidonoylated residue","termid":"MOD:02017"}


id: GO:0051913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chemical substance modulates synaptic plasticity, the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic plasticity by chemical substance","synonyms":[{"name":"regulation of synaptic plasticity by drug","type":"narrow"}],"termid":"GO:0051913"}


id: PBO:0039716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 2","termid":"PBO:0039716"}


id: MONDO:1012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, pig","synonyms":[{"name":"gangliosidosis, GM2, generic, pig","type":"related"}],"termid":"MONDO:1012604","xrefs":{"Monarch":{"xref_id":"1012604"}}}


id: MONDO:1010545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic fibrosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic fibrosis, non-human animal","termid":"MONDO:1010043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic fibrosis, sheep","secondary_identifiers":["OMIA:001794-9940"],"termid":"MONDO:1010545","xrefs":{"Monarch":{"xref_id":"1010545"}}}


id: GO:0018926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.","definition_xrefs":["UM-BBD_pathwayID:msa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanesulfonic acid metabolic process","synonyms":[{"name":"methanesulfonic acid metabolism","type":"exact"},{"name":"methanesulphonic acid metabolic process","type":"exact"},{"name":"methanesulphonic acid metabolism","type":"exact"}],"termid":"GO:0018926"}


id: GO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II complex binding","termid":"GO:0000993"},{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase II complex recruiting activity","synonyms":[{"name":"core RNA polymerase II recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, core RNA polymerase II recruiting","type":"related"}],"termid":"GO:0001139"}


id: PBO:0053131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactase like","termid":"PBO:0053131"}


id: MONDO:0016187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of desmin","secondary_identifiers":["UMLS:C5680839","GARD:20426","MEDGEN:1842905","Orphanet:209041"],"termid":"MONDO:0016187","xrefs":{"Monarch":{"xref_id":"0016187"}}}


id: GO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of (Z)-dehydrobutyrine by the dehydration of peptidyl-threonine.","definition_xrefs":["RESID:AA0182"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-(Z)-dehydrobutyrine biosynthetic process from peptidyl-threonine (obsolete GO:0018082)","synonyms":[{"name":"peptidyl-(Z)-dehydrobutyrine anabolism from peptidyl-threonine","type":"exact"},{"name":"peptidyl-(Z)-dehydrobutyrine formation from peptidyl-threonine","type":"exact"},{"name":"peptidyl-(Z)-dehydrobutyrine synthesis from peptidyl-threonine","type":"exact"}],"termid":"GO:0018082"}


id: GO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uptake of cholesterol into the blood by absorption from the intestine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"},{"relation_name":"is_a","term_name":"negative regulation of intestinal lipid absorption","termid":"GO:1904730"},{"relation_name":"negatively_regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal cholesterol absorption","synonyms":[{"name":"down regulation of cholesterol absorption","type":"exact"},{"name":"down-regulation of cholesterol absorption","type":"exact"},{"name":"downregulation of cholesterol absorption","type":"exact"},{"name":"inhibition of cholesterol absorption","type":"narrow"}],"termid":"GO:0045796"}


id: MONDO:0023206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low or intermediate grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of a clinical syndrome that results from hormone hypersecretion.","definition_xrefs":["NCIT:C45840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"},{"relation_name":"is_a","term_name":"functioning endocrine neoplasm","termid":"MONDO:0021120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"functional pancreatic neuroendocrine tumor","secondary_identifiers":["GARD:22053","MEDGEN:310778","UMLS:C1708107","Orphanet:506060"],"synonyms":[{"name":"functional pancreatic NET","type":"exact"},{"name":"functional pancreatic neuroendocrine tumor","type":"exact"},{"name":"functioning PNET","type":"exact"},{"name":"functioning neuroendocrine tumor of pancreas","type":"related"},{"name":"functioning neuroendocrine tumour of pancreas","type":"related"},{"name":"functioning pancreatic NET","type":"exact"},{"name":"functioning pancreatic endocrine tumor","type":"exact"},{"name":"functioning pancreatic endocrine tumour","type":"exact"},{"name":"functioning pancreatic neuroendocrine tumor","type":"exact"},{"name":"functioning pancreatic neuroendocrine tumour","type":"exact"},{"name":"functioning well differentiated pancreatic endocrine neoplasm","type":"exact"},{"name":"functioning well differentiated pancreatic endocrine tumor","type":"exact"},{"name":"functioning well differentiated pancreatic endocrine tumour","type":"exact"},{"name":"functioning well-differentiated NEN of pancreas","type":"exact"},{"name":"functioning well-differentiated neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"functioning well-differentiated pancreatic NEN","type":"exact"},{"name":"functioning well-differentiated pancreatic neuroendocrine neoplasm","type":"exact"},{"name":"syndromic pancreatic NET","type":"exact"},{"name":"syndromic pancreatic neuroendocrine tumor","type":"exact"},{"name":"syndromic pancreatic neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0023206","xrefs":{"Monarch":{"xref_id":"0023206"}}}


id: GO:1904644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["PMID:24755072","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to curcumin","termid":"GO:1904643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to curcumin","termid":"GO:1904644"}


id: PATO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000780 relative locomotor activity value (obsolete PATO:0000780)","termid":"PATO:0000780"}


id: PATO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000853 blinking reflex value (obsolete PATO:0000853)","termid":"PATO:0000853"}


id: PBO:0057646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1238","termid":"PBO:0057646"}


id: PBO:0067680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 865, pseudogene","termid":"PBO:0067680"}


id: PBO:0077836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblast glycoprotein","termid":"PBO:0077836"}


id: PBO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA/biotin carboxylase","termid":"PBO:0000866"}


id: GO:0030204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate metabolic process (obsolete GO:0030204)","secondary_identifiers":["Reactome:R-HSA-1793185"],"synonyms":[{"name":"chondroitin sulfate metabolism","type":"exact"},{"name":"chondroitin sulphate metabolic process","type":"exact"},{"name":"chondroitin sulphate metabolism","type":"exact"}],"termid":"GO:0030204"}


id: PBO:0071133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 135","termid":"PBO:0071133"}


id: GO:2001306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin B4 metabolic process","termid":"GO:2001304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoxin B4 biosynthetic process","synonyms":[{"name":"LXB4 anabolism","type":"exact"},{"name":"LXB4 biosynthesis","type":"exact"},{"name":"LXB4 biosynthetic process","type":"exact"},{"name":"LXB4 formation","type":"exact"},{"name":"LXB4 synthesis","type":"exact"},{"name":"lipoxin B4 anabolism","type":"exact"},{"name":"lipoxin B4 biosynthesis","type":"exact"},{"name":"lipoxin B4 formation","type":"exact"},{"name":"lipoxin B4 synthesis","type":"exact"}],"termid":"GO:2001306"}


id: PBO:0026916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribosome_biogenesis","termid":"PBO:0026916"}


id: MONDO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of hepatitis C infection.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis C virus infection","termid":"MONDO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"chronic hepatitis C virus infection","secondary_identifiers":["EFO:0004220","ICD9:070.44","MESH:D019698"],"synonyms":[{"name":"chronic Hepatitis C","type":"exact"},{"name":"hepatitis C infection, chronic","type":"exact"},{"name":"hepatitis C, chronic","type":"exact"}],"termid":"MONDO:0005354","xrefs":{"Monarch":{"xref_id":"0005354"}}}


id: PBO:0053119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 9","termid":"PBO:0053119"}


id: PR:O94453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquinone biosynthesis protein COQ4, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12922:SF5","PRO:DNx","OMA:SCHPO00361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein coq4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.12c","secondary_identifiers":["UniProtKB:O94453"],"synonyms":[{"name":"Spom972h-COQ4","type":"exact"},{"name":"coenzyme Q biosynthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94453"}


id: PBO:0076553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 1","termid":"PBO:0076553"}


id: FYPO:0004880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PomBase:mah","PMID:26366556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004880"}


id: GO:0072362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072362)","synonyms":[{"name":"regulation of glycolysis by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072362"}


id: PBO:0088819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methyltransferase","termid":"PBO:0088819"}


id: MONDO:0012325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nguyen syndrome","secondary_identifiers":["OMIM:609643","UMLS:C1864823","MEDGEN:400620","MESH:C536115"],"synonyms":[{"name":"MCA/MR syndrome with hypocholesterolemia due to familial hypobetalipoproteinemia","type":"related"},{"name":"MCA/Mr with hypocholesterolemia due to familial hypobetalipoproteinemia","type":"related"},{"name":"Nguyen syndrome","type":"exact"}],"termid":"MONDO:0012325","xrefs":{"Monarch":{"xref_id":"0012325"}}}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_02178","SJAG_01209","SJAG_01089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74319,81973,110889],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-alpha-D-glucose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: MONDO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"progressive retinal dystrophy due to retinol transport defect","secondary_identifiers":["ICD10CM:H35.5","OMIM:615147","MEDGEN:767507","GARD:17529","Orphanet:352718","UMLS:C3554593"],"synonyms":[{"name":"RDCCAS","type":"related"},{"name":"retinal dystrophy, iris coloboma, and comedogenic acne syndrome","type":"related"},{"name":"retinol dystrophy-iris coloboma-comedogenic acne syndrome","type":"exact"}],"termid":"MONDO:0014060","xrefs":{"Monarch":{"xref_id":"0014060"}}}


id: PBO:0029369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029369"}


id: GO:1900709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"positively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of tensidol A biosynthetic process","synonyms":[{"name":"activation of tensidol A anabolism","type":"exact"},{"name":"activation of tensidol A biosynthesis","type":"exact"},{"name":"activation of tensidol A biosynthetic process","type":"narrow"},{"name":"activation of tensidol A formation","type":"exact"},{"name":"activation of tensidol A synthesis","type":"exact"},{"name":"positive regulation of tensidol A anabolism","type":"exact"},{"name":"positive regulation of tensidol A biosynthesis","type":"exact"},{"name":"positive regulation of tensidol A formation","type":"exact"},{"name":"positive regulation of tensidol A synthesis","type":"exact"},{"name":"up regulation of tensidol A anabolism","type":"exact"},{"name":"up regulation of tensidol A biosynthesis","type":"exact"},{"name":"up regulation of tensidol A biosynthetic process","type":"exact"},{"name":"up regulation of tensidol A formation","type":"exact"},{"name":"up regulation of tensidol A synthesis","type":"exact"},{"name":"up-regulation of tensidol A anabolism","type":"exact"},{"name":"up-regulation of tensidol A biosynthesis","type":"exact"},{"name":"up-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol A formation","type":"exact"},{"name":"up-regulation of tensidol A synthesis","type":"exact"},{"name":"upregulation of tensidol A anabolism","type":"exact"},{"name":"upregulation of tensidol A biosynthesis","type":"exact"},{"name":"upregulation of tensidol A biosynthetic process","type":"exact"},{"name":"upregulation of tensidol A formation","type":"exact"},{"name":"upregulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900709"}


id: GO:0021749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cochlear nucleus development","termid":"GO:0021747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral cochlear nucleus development","termid":"GO:0021749"}


id: PBO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 1","termid":"PBO:0045099"}


id: GO:0044522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, killing heart myocytes and ultimately resulting in muscle damage in the bitten organism.","definition_xrefs":["GOC:jl","PMID:10620318","PMID:21150580","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"venom-mediated muscle damage in another organism","termid":"GO:0044521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated myocyte killing in another organism","synonyms":[{"name":"envenomation resulting in myocyte killing causing muscle damage in other organism","type":"exact"},{"name":"envenomation resulting in myocyte killing in another organism","type":"exact"},{"name":"envenomation resulting in myocyte killing in other organism","type":"exact"}],"termid":"GO:0044522"}


id: GO:0071361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ethanol","termid":"GO:0045471"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ethanol","termid":"GO:0071361"}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: PBO:0038533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 8","termid":"PBO:0038533"}


id: PBO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 23","termid":"PBO:0060076"}


id: GO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl-R.","definition_xrefs":["EC:2.4.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"beta-galactoside (CMP) alpha-2,3-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.4-RXN","Reactome:R-HSA-1022129","Reactome:R-HSA-3656258","Reactome:R-HSA-9844860","Reactome:R-HSA-9845538","Reactome:R-HSA-9603987","Reactome:R-HSA-1912378","Reactome:R-HSA-981497","Reactome:R-HSA-9605600","RHEA:21616","Reactome:R-HSA-2046285","Reactome:R-HSA-4084984"],"termid":"GO:0003836"}


id: GO:1905311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:BHF","PMID:17628518","GO_REF:0000058","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"},{"relation_name":"negatively_regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","synonyms":[{"name":"down regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"down-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"downregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"exact"},{"name":"inhibition of cardiac neural crest cell migration involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1905311"}


id: GO:0140733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a tRNA ligase.","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"tRNA ligase activator activity","termid":"GO:0140733"}


id: MONDO:0002078
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431","SJAG_02730","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87799,87800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[87172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[88501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[88500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by the presence of an abnormal communication between the atria or the ventricles of the heart due to defects in the cardiac septum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:745.9","DOID:1681","NCIT:C84482","SCTID:253273004","MESH:D006343","UMLS:C0018816","ICD9:745.8","MEDGEN:6752"],"synonyms":[{"name":"Cardiac septal defects","type":"exact"},{"name":"congenital septal defect","type":"exact"},{"name":"congenital septal defect of heart","type":"exact"},{"name":"holes in the heart","type":"exact"},{"name":"septal defect","type":"exact"}],"termid":"MONDO:0002078","terms_by_termid":{"MONDO:0013011":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0002078"}}}


id: MONDO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinoma (obsolete MONDO:0002157)","termid":"MONDO:0002157","xrefs":{"Monarch":{"xref_id":"0002157"}}}


id: MONDO:0006129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system lymphoma (obsolete MONDO:0006129)","termid":"MONDO:0006129","xrefs":{"Monarch":{"xref_id":"0006129"}}}


id: GO:0007486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the female genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia development","termid":"GO:0007484"},{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived female genitalia development","synonyms":[{"name":"female genital development","type":"broad"}],"termid":"GO:0007486"}


id: PBO:0114081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0114081"}


id: PBO:0055640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3079","termid":"PBO:0055640"}


id: PBO:0068482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 63, pseudogene","termid":"PBO:0068482"}


id: FYPO:0002525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of one or more chromosomes are normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal chromosome morphology","synonyms":[{"name":"normal chromosome morphology during mitotic cell cycle","type":"related"},{"name":"normal chromosome morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0002525"}


id: GO:1903510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving mucopolysaccharide.","definition_xrefs":["GO_REF:0000068","GOC:dph","PMID:4236091","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharide metabolic process (obsolete GO:1903510)","synonyms":[{"name":"mucopolysaccharide metabolism","type":"exact"}],"termid":"GO:1903510"}


id: GO:1901772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lincomycin.","definition_xrefs":["GOC:yaf","PMID:8577249","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"lincomycin metabolic process","synonyms":[{"name":"lincomycin metabolism","type":"exact"}],"termid":"GO:1901772"}


id: PBO:0040672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31","termid":"PBO:0040672"}


id: MONDO:0007732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holt-Oram syndrome (HOS) is the most common form of heart-hand syndrome and is characterized by skeletal abnormalities of the upper limbs and mild-to-severe congenital cardiac defects.","definition_xrefs":["Orphanet:392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Holt-Oram syndrome","secondary_identifiers":["NCIT:C125592","NORD:1248","OMIM:142900","SCTID:19092004","UMLS:C0265264","MEDGEN:120524","MedDRA:10050469","DOID:0060468","ICD9:759.89","GARD:6666","MESH:C535326"],"synonyms":[{"name":"Cardiac-limb syndrome","type":"related"},{"name":"HOLT-Oram syndrome","type":"exact"},{"name":"HOS","type":"exact"},{"name":"HOS 1","type":"related"},{"name":"Holt Oram Syndrome","type":"exact"},{"name":"Holt-Oram syndrome","type":"exact"},{"name":"Hos1","type":"related"},{"name":"atrio digital syndrome","type":"broad"},{"name":"atrio-digital syndrome","type":"broad"},{"name":"atriodigital dysplasia","type":"broad"},{"name":"atriodigital dysplasia type 1","type":"exact"},{"name":"heart-hand syndrome","type":"broad"},{"name":"heart-hand syndrome type 1","type":"exact"},{"name":"heart-hand syndrome, type 1","type":"related"},{"name":"ventriculo-radial syndrome","type":"related"}],"termid":"MONDO:0007732","xrefs":{"Monarch":{"xref_id":"0007732"}}}


id: MONDO:0019803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioma serpiginosum (AS) is a benign congenital skin disease characterized by progressive dilation of the subepidermal skin vessels manifesting as purple punctate lesions usually appearing on the lower limbs and buttocks and following the lines of Blaschko.","definition_xrefs":["Orphanet:95429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum","secondary_identifiers":["DOID:4028","NCIT:C3926","SCTID:49465005","UMLS:C0263637","MEDGEN:75528","GARD:15021","icd11.foundation:1724787481"],"synonyms":[{"name":"angioma serpiginosum of skin","type":"exact"}],"termid":"MONDO:0019803","xrefs":{"Monarch":{"xref_id":"0019803"}}}


id: GO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A3 adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"A3 adenosine receptor binding","synonyms":[{"name":"A3 adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031689"}


id: PBO:0030567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_alanine_level","termid":"PBO:0030567"}


id: GO:0032536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the size of a cell projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection size","termid":"GO:0032536"}


id: GO:0015498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: pantothenate(out) + Na+(out) = pantothenate(in) + Na+(in).","definition_xrefs":["TC:2.A.21.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pantothenate:sodium symporter activity","termid":"GO:0015498"}


id: FYPO:0005017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which ribosome biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal ribosome biogenesis","synonyms":[{"name":"abnormal ribosome biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal ribosome biogenesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005017"}


id: FYECO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amino acids were transiently removed from medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ limited nitrogen","termid":"FYECO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient amino acid starvation < 1 hour","termid":"FYECO:0000401"}


id: PBO:0041463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf95 antisense RNA 1","termid":"PBO:0041463"}


id: MONDO:0012098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 20 (SCA20) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar dysarthria as the initial typical manifestation.","definition_xrefs":["Orphanet:101110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 20","secondary_identifiers":["SCTID:718771009","DOID:0050971","UMLS:C1837541","MEDGEN:373352","MESH:C537199","icd11.foundation:960716995","OMIM:608687","GARD:9997"],"synonyms":[{"name":"SCA20","type":"exact"},{"name":"chromosome 11q12 duplication syndrome, 260-Kb","type":"related"},{"name":"spinocerebellar ataxia 20","type":"related"},{"name":"spinocerebellar ataxia type 20","type":"exact"},{"name":"spinocerebellar ataxia with dysphonia","type":"related"},{"name":"spinocerebellar ataxia with spasmodic cough","type":"related"}],"termid":"MONDO:0012098","xrefs":{"Monarch":{"xref_id":"0012098"}}}


id: MONDO:0014661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex with nail dystrophy","secondary_identifiers":["MEDGEN:906476","UMLS:C4225309","OMIM:616487"],"synonyms":[{"name":"EBSND","type":"related"},{"name":"epidermolysis bullosa simplex 5D, generalised intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex 5D, generalized intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex with nail dystrophy","type":"exact"}],"termid":"MONDO:0014661","xrefs":{"Monarch":{"xref_id":"0014661"}}}


id: PBO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase (predicted)","termid":"PBO:0002007"}


id: PR:Q9P7H4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.05","synonyms":[{"name":"PPIase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa2","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H4"}


id: GO:1905306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","PMID:16151019","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"positively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac myofibril assembly","synonyms":[{"name":"activation of cardiac myofibril assembly","type":"narrow"},{"name":"activation of cardiac myofibril development","type":"narrow"},{"name":"activation of cardiac myofibril morphogenesis","type":"narrow"},{"name":"activation of heart myofibril assembly","type":"related"},{"name":"positive regulation of cardiac myofibril development","type":"exact"},{"name":"positive regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"positive regulation of heart myofibril assembly","type":"related"},{"name":"up regulation of cardiac myofibril assembly","type":"exact"},{"name":"up regulation of cardiac myofibril development","type":"exact"},{"name":"up regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up regulation of heart myofibril assembly","type":"related"},{"name":"up-regulation of cardiac myofibril assembly","type":"exact"},{"name":"up-regulation of cardiac myofibril development","type":"exact"},{"name":"up-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up-regulation of heart myofibril assembly","type":"related"},{"name":"upregulation of cardiac myofibril assembly","type":"exact"},{"name":"upregulation of cardiac myofibril development","type":"exact"},{"name":"upregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"upregulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905306"}


id: GO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type II secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction (obsolete GO:0052206)","synonyms":[{"name":"modification of morphology or physiology of other organism via protein secreted by type II secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052206"}


id: GO:1900262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-directed DNA polymerase activity (obsolete GO:1900262)","synonyms":[{"name":"regulation of DNA duplicase activity","type":"exact"},{"name":"regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of DNA polymerase I","type":"narrow"},{"name":"regulation of DNA polymerase II","type":"narrow"},{"name":"regulation of DNA polymerase III","type":"narrow"},{"name":"regulation of DNA polymerase V activity","type":"narrow"},{"name":"regulation of DNA polymerase alpha","type":"narrow"},{"name":"regulation of DNA polymerase beta","type":"narrow"},{"name":"regulation of DNA polymerase gamma","type":"narrow"},{"name":"regulation of DNA replicase activity","type":"exact"},{"name":"regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"regulation of Klenow fragment","type":"narrow"},{"name":"regulation of Taq DNA polymerase","type":"narrow"},{"name":"regulation of Taq Pol I","type":"narrow"},{"name":"regulation of Tca DNA polymerase","type":"narrow"},{"name":"regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"regulation of beta DNA polymerase activity","type":"narrow"},{"name":"regulation of delta DNA polymerase activity","type":"narrow"},{"name":"regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"regulation of duplicase","type":"broad"},{"name":"regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"regulation of eta DNA polymerase activity","type":"narrow"},{"name":"regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"regulation of iota DNA polymerase activity","type":"narrow"},{"name":"regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"regulation of mu DNA polymerase activity","type":"narrow"},{"name":"regulation of nu DNA polymerase activity","type":"narrow"},{"name":"regulation of sequenase","type":"related"},{"name":"regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"regulation of theta DNA polymerase activity","type":"narrow"},{"name":"regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900262"}


