# terms

id: GO:0042273
data:
  {"annotated_genes":["SJAG_00479","SJAG_04414","SJAG_04308","SJAG_03713","SJAG_02840","SJAG_05248","SJAG_01366","SJAG_04919","SJAG_02754","SJAG_04004","SJAG_00932","SJAG_04492","SJAG_00271","SJAG_01821","SJAG_00537","SJAG_04562","SJAG_00166","SJAG_04330","SJAG_02952","SJAG_00921","SJAG_03080","SJAG_01420","SJAG_03496","SJAG_02759","SJAG_04992","SJAG_02894","SJAG_00231","SJAG_01364","SJAG_04940","SJAG_01752","SJAG_01621","SJAG_01122","SJAG_02417","SJAG_03658","SJAG_01581","SJAG_04599","SJAG_01954","SJAG_03413","SJAG_04180","SJAG_04108","SJAG_05223","SJAG_03155","SJAG_00949","SJAG_02535","SJAG_03458","SJAG_01454","SJAG_00689","SJAG_04346","SJAG_04890","SJAG_01568","SJAG_02644","SJAG_00752","SJAG_04395","SJAG_04304","SJAG_00749","SJAG_03425","SJAG_03789","SJAG_00882","SJAG_03697","SJAG_02745","SJAG_01339","SJAG_03773","SJAG_02374","SJAG_01365","SJAG_02868","SJAG_05190","SJAG_01813","SJAG_02475","SJAG_05679","SJAG_02830","SJAG_00323","SJAG_03971","SJAG_01811","SJAG_02436","SJAG_01551","SJAG_02890","SJAG_02275","SJAG_02427","SJAG_00659","SJAG_02891","SJAG_01494","SJAG_02508","SJAG_03466","SJAG_01839","SJAG_03012","SJAG_00722","SJAG_01161","SJAG_03905","SJAG_04289","SJAG_04066","SJAG_04669","SJAG_01606","SJAG_00390"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63743,71913,72051,72071,73803,74575,74634,75989,76900,77848,78524,78624,78918,78932,79285,80082,81959,92241,102417,104856,105345,108945,110151,118136,118576,120966],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[81275,94279,117800,104468,109412,57344,57991,102338,91505,105454,94698,102672,102532,114909,117799,112804,114146,118675,101105,110996,99900,120949,107972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[106064,93591,96870,73287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[101389,106767,98988,99901,104469,89518,106081,112730,118600,118599,93990,112731,96747,106001,106233,107182],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[76994,73411,80729,81159,74219,77175,81278],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[72996,75106,74060,77692,79999,101984,77018,75820,72124,76612,75270,80518,99870,81543,99903,62434,74086,75450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[113995,103229,110366,109170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[74515,73894,74173,72873,67327,64941,92923,92921],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00231":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00659":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01551":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01821":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03413":null,"SJAG_03425":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_03971":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04890":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: PBO:0058908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12126","termid":"PBO:0058908"}


id: MOD:00552
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 4x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:14670044","Unimod:199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-CHD2","type":"related"},{"name":"Dimethyl:2H(4)","type":"related"}],"termid":"MOD:00552"}


id: MONDO:1012240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central retinal degeneration, non-human animal","termid":"MONDO:1011978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, domestic cat","secondary_identifiers":["OMIA:000867-9685"],"termid":"MONDO:1012240","xrefs":{"Monarch":{"xref_id":"1012240"}}}


id: GO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in camera-type eye morphogenesis","termid":"GO:0003411"}


id: PBO:0054735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2144","termid":"PBO:0054735"}


id: PBO:0039366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 2","termid":"PBO:0039366"}


id: GO:2000431
data:
  {"annotated_genes":["SJAG_02592","SJAG_04597","SJAG_00082","SJAG_03048","SJAG_02838","SJAG_02795","SJAG_02392","SJAG_00845","SJAG_01805","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[96267,97765,105644,112760,92649,104314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[96309,91878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[121207,95705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0030036","GO:0007049","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000431","terms_by_termid":{"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: GO:0102933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-4-amino-4,6-dideoxy-alpha-D-mannose + 2-oxoglutarate = GDP-4-dehydro-6-deoxy-alpha-D-mannose + L-glutamate.","definition_xrefs":["RHEA:36779","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase activity","secondary_identifiers":["EC:2.6.1.102","MetaCyc:RXN-8953"],"termid":"GO:0102933"}


id: MONDO:0010958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac arrhythmia, ankyrin-B-related","secondary_identifiers":["OMIM:600919","DOID:0111700","DOID:0111701","GARD:10432","SCTID:764457005","MEDGEN:370181","UMLS:C1970119"],"synonyms":[{"name":"LQT4","type":"related"},{"name":"ankyrin-B syndrome","type":"exact"},{"name":"cardiac arrhythmia, ankyrin-b-related","type":"exact"}],"termid":"MONDO:0010958","xrefs":{"Monarch":{"xref_id":"0010958"}}}


id: GO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the urokinase plasminogen activator to initiate a change in cell activity.","definition_xrefs":["PMID:16456079","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"urokinase plasminogen activator receptor activity","secondary_identifiers":["Wikipedia:Urokinase_receptor"],"synonyms":[{"name":"U-plasminogen activator receptor activity","type":"exact"},{"name":"uPAR","type":"exact"},{"name":"urokinase plasminogen activator receptor","type":"exact"}],"termid":"GO:0030377"}


id: SO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for 2S ribosomal RNA, which functions as a component of the large subunit of the ribosome in Drosophila and at least some other Diptera.","definition_xrefs":["PMID:4847940","PMID:10788608","PMID:407103","PMID:768488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_2S_gene","synonyms":[{"name":"2S rRNA gene","type":"exact"},{"name":"rRNA 2S gene","type":"exact"}],"termid":"SO:0002336"}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: GO:0140931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) + Cl-(out) = neutral L-amino acid(in) + Na+(in)+ Cl-(in).","definition_xrefs":["PMID:19478081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"neutral L-amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral amino acid:sodium:chloride symporter activity","type":"exact"}],"termid":"GO:0140931"}


id: PBO:0086466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial aconitase isozyme; similarity to Aco1p, an aconitase required for the TCA cycle; expression induced during growth on glucose, by amino acid starvation via Gcn4p, and repressed on ethanol","termid":"PBO:0086466"}


id: MONDO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenofibroma (obsolete MONDO:0002389)","termid":"MONDO:0002389","xrefs":{"Monarch":{"xref_id":"0002389"}}}


id: PBO:0051518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 family member 10","termid":"PBO:0051518"}


id: PBO:0028521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation","termid":"PBO:0028521"}


id: PBO:0068923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 166, pseudogene","termid":"PBO:0068923"}


id: GO:1990251
data:
  {"annotated_genes":["SJAG_03745","SJAG_01867","SJAG_04006","SJAG_04601","SJAG_02622","SJAG_00961","SJAG_02720","SJAG_04768"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89350,93755,94127,95333,106247,109424,113298,120146],"is_not":false,"summary":null,"term":"GO:1990251"}]},"cv_name":"cellular_component","definition":"An nuclear body involved in nuclear mRNA surveilllance. Contains at least Mmi1, or an ortholog of it, and the nuclear exosome.","definition_xrefs":["GOC:vw","GOC:al","PMID:23980030","PMID:32012158","PMID:16823445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00961":null,"SJAG_01867":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04601":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"nuclear exosome focus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mmi1 nuclear focus","type":"exact"},{"name":"nuclear body","type":"related"}],"termid":"GO:1990251","terms_by_termid":{"GO:1990251":null}}


id: MONDO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific phobia that involves an irrational fear of contracting a disease.","definition_xrefs":["DOID:0060048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific phobia","termid":"MONDO:0012000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nosophobia","secondary_identifiers":["UMLS:C0522182","MEDGEN:637105"],"termid":"MONDO:0000600","xrefs":{"Monarch":{"xref_id":"0000600"}}}


id: PBO:0048966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1 pseudogene 1","termid":"PBO:0048966"}


id: MONDO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the ALPI gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:29567797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ALPI-related inflammatory bowel disease","secondary_identifiers":["Orphanet:597887","UMLS:C5681586","GARD:22400","MEDGEN:1842198"],"termid":"MONDO:0035370","xrefs":{"Monarch":{"xref_id":"0035370"}}}


id: GO:1900164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding to an activin receptor on the surface of a target cell, which contributes to the establishment of lateral mesoderm with respect to the left and right halves.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900164)","synonyms":[{"name":"nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900164"}


id: PR:O14072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A manganese-transporting ATPase 13A1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese-transporting ATPase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.07c","secondary_identifiers":["UniProtKB:O14072"],"synonyms":[{"name":"Spom972h-ATP13A1","type":"exact"}],"termid":"PR:O14072"}


id: GO:1902609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (R)-2-hydroxy-alpha-linolenic acid.","definition_xrefs":["PMID:24214535","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"(R)-2-hydroxy-alpha-linolenic acid biosynthetic process","synonyms":[{"name":"(R)-2-hydroxy-alpha-linolenic acid anabolism","type":"exact"},{"name":"(R)-2-hydroxy-alpha-linolenic acid biosynthesis","type":"exact"},{"name":"(R)-2-hydroxy-alpha-linolenic acid formation","type":"exact"},{"name":"(R)-2-hydroxy-alpha-linolenic acid synthesis","type":"exact"},{"name":"2-hydroxy-octadecatrienoic acid biosynthesis","type":"broad"}],"termid":"GO:1902609"}


id: GO:0071834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that contributes to a process of sexual reproduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"mating pheromone secretion","synonyms":[{"name":"mating-type pheromone secretion","type":"exact"}],"termid":"GO:0071834"}


id: GO:0001098
data:
  {"annotated_genes":["SJAG_02037","SJAG_00095","SJAG_00159","SJAG_01151","SJAG_01610","SJAG_04353","SJAG_03118","SJAG_00483","SJAG_00139","SJAG_00448","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[74290,79983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[57555,74062,72851,80427,80438,78039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[80996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[77938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00139":null,"SJAG_00159":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_02037":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"basal transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0001098","terms_by_termid":{"GO:0000993":null,"GO:0001096":null,"GO:0001097":null,"GO:0099122":null,"GO:1990269":null}}


id: CHEBI:67229
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conduritol B epoxide","termid":"CHEBI:67229"}


id: PBO:0059658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 24","termid":"PBO:0059658"}


id: GO:0098004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail fiber.","definition_xrefs":["GOC:bm","VZ:3956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus tail fiber assembly","termid":"GO:0098004"}


id: MONDO:0958106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital insensitivity to pain syndrome, Marsili type","secondary_identifiers":["Orphanet:653728"],"termid":"MONDO:0958106","xrefs":{"Monarch":{"xref_id":"0958106"}}}


id: FYPO:0006311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-3'-diphospho-5'-guanosine diphosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA-3'-diphospho-5'-guanosine diphosphatase activity","synonyms":[{"name":"DNA-3'-diphospho-5'-guanosine diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0006311"}


id: GO:1905680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of innate immunity memory response","termid":"GO:1905680"}


id: PBO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 antisense RNA 1","termid":"PBO:0042323"}


id: PBO:0082875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Covalently linked cell wall glycoprotein; present in the inner layer of the cell wall","termid":"PBO:0082875"}


id: GO:0043829
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73381],"is_not":false,"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-37 + H2O = inosine-37 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["PMID:9707437","PMID:8915538","RHEA:50968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0140098","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA-specific adenosine-37 deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.5.4.34"],"synonyms":[{"name":"TAD1","type":"related"},{"name":"tRNA(Ala)-A37 deaminase activity","type":"exact"},{"name":"tRNA-specific adenosine deaminase 1","type":"exact"}],"termid":"GO:0043829","terms_by_termid":{"GO:0043829":null}}


id: PBO:0035953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0035953"}


id: MONDO:0958138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory disease, multisystem, with immune dysregulation, X-linked","termid":"MONDO:0957494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset immune dysregulation due to DOCK11 complete deficiency","secondary_identifiers":["UMLS:C5925136","MEDGEN:1864413","Orphanet:658951"],"termid":"MONDO:0958138","xrefs":{"Monarch":{"xref_id":"0958138"}}}


id: FYPO:0007489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the cytosol instead.","definition_xrefs":["PomBase:mah","PMID:32918581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to cytosol","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to cytosol during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to cytosol","type":"exact"}],"termid":"FYPO:0007489"}


id: MONDO:0044347
data:
  {"annotated_genes":["SJAG_03929","SJAG_00988","SJAG_01351","SJAG_02796","SJAG_04495","SJAG_04217","SJAG_00235","SJAG_04334","SJAG_01162","SJAG_02297","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[87824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[87371,87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"},{"annotations":[88306,88305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[87434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the erythrocyte.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00839":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"erythrocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:38292009","MEDGEN:526127","UMLS:C0221016","ICD9:289.9"],"synonyms":[{"name":"disease of erythrocyte","type":"exact"},{"name":"disease or disorder of erythrocyte","type":"exact"},{"name":"disorder of erythrocyte","type":"exact"},{"name":"erythrocyte disease","type":"exact"},{"name":"erythrocyte disease or disorder","type":"exact"},{"name":"red blood cell disease","type":"exact"},{"name":"red blood cell disorder","type":"exact"}],"termid":"MONDO:0044347","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009340":null,"MONDO:0009605":null,"MONDO:0009606":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0044347"}}}


id: GO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Covalent attachment of the ubiquitin-like protein NEDD8 (or equivalent protein) to another protein, as a part of NEDD8-dependant protein catabolism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein neddylation during NEDD8 class-dependent protein catabolic process (obsolete GO:0042798)","synonyms":[{"name":"protein neddylation during NEDD8 class-dependent protein breakdown","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolism","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein degradation","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolism","type":"exact"}],"termid":"GO:0042798"}


id: GO:0102135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH + O2 = (22R,23R)-22,23-dihydroxy-campest-4-en-3-one + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(22S)-22-hydroxy-campest-4-en-3-one C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11530"],"termid":"GO:0102135"}


id: PBO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine-tRNA ligase beta subunit Frs1 (predicted)","termid":"PBO:0002366"}


id: GO:0035966
data:
  {"annotated_genes":["SJAG_04283","SJAG_04435","SJAG_03657","SJAG_03841","SJAG_00681","SJAG_00552","SJAG_00226","SJAG_01737","SJAG_02341","SJAG_00054","SJAG_04612","SJAG_04187","SJAG_02601","SJAG_00530","SJAG_00403","SJAG_00219","SJAG_00790","SJAG_04471","SJAG_01516","SJAG_04567","SJAG_00173","SJAG_04103","SJAG_01160","SJAG_02419","SJAG_03611","SJAG_00564","SJAG_01556","SJAG_00270","SJAG_03345","SJAG_03482","SJAG_05022","SJAG_04262","SJAG_01768","SJAG_04118","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106158,111998,111997,114296,72629,89941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[104874,112000,111999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[115633,111629,111736,112325,109984],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[119256,72516,73068,100641,103178,116092,116228,78146,109148,118804,69709,79044,115820,118050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[91139,114993,89661,105356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[68065,94990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[79475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[78332,112850],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00226":null,"SJAG_00270":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00552":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01160":null,"SJAG_01516":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_01768":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02601":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04187":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to topologically incorrect protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"response to misfolded or unfolded protein","type":"related"}],"termid":"GO:0035966","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null,"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: GO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerophosphate(n) + CDP-glycerol = glycerophosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016780"],"is_obsolete":false,"name":"CDP-glycerol glycerophosphotransferase activity","secondary_identifiers":["RHEA:13565","MetaCyc:TEICHOICSYN4-RXN"],"synonyms":[{"name":"CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase activity","type":"related"},{"name":"CDPglycerol glycerophosphotransferase activity","type":"related"},{"name":"CGPTase activity","type":"related"},{"name":"cytidine diphosphoglycerol glycerophosphotransferase activity","type":"related"},{"name":"glycerophosphate synthetase activity","type":"related"},{"name":"poly(glycerol phosphate) polymerase activity","type":"related"},{"name":"teichoic acid glycerol transferase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047355"}


id: PBO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.11","termid":"PBO:0001297"}


id: GO:0047585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-pyridoxolactone + H2O = 4-pyridoxate + H+.","definition_xrefs":["EC:3.1.1.27","RHEA:14301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-pyridoxolactonase activity","secondary_identifiers":["KEGG_REACTION:R02992","MetaCyc:4-PYRIDOXOLACTONASE-RXN"],"synonyms":[{"name":"4-pyridoxolactone lactonohydrolase activity","type":"related"}],"termid":"GO:0047585"}


id: PBO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCCTC-binding factor","termid":"PBO:0044148"}


id: PBO:0079125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 1","termid":"PBO:0079125"}


id: GO:1902729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"negatively_regulates","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteoglycan biosynthetic process","synonyms":[{"name":"down regulation of proteoglycan anabolism","type":"exact"},{"name":"down regulation of proteoglycan biosynthesis","type":"exact"},{"name":"down regulation of proteoglycan biosynthetic process","type":"exact"},{"name":"down regulation of proteoglycan formation","type":"exact"},{"name":"down regulation of proteoglycan synthesis","type":"exact"},{"name":"down-regulation of proteoglycan anabolism","type":"exact"},{"name":"down-regulation of proteoglycan biosynthesis","type":"exact"},{"name":"down-regulation of proteoglycan biosynthetic process","type":"exact"},{"name":"down-regulation of proteoglycan formation","type":"exact"},{"name":"down-regulation of proteoglycan synthesis","type":"exact"},{"name":"downregulation of proteoglycan anabolism","type":"exact"},{"name":"downregulation of proteoglycan biosynthesis","type":"exact"},{"name":"downregulation of proteoglycan biosynthetic process","type":"exact"},{"name":"downregulation of proteoglycan formation","type":"exact"},{"name":"downregulation of proteoglycan synthesis","type":"exact"},{"name":"inhibition of proteoglycan anabolism","type":"narrow"},{"name":"inhibition of proteoglycan biosynthesis","type":"narrow"},{"name":"inhibition of proteoglycan biosynthetic process","type":"narrow"},{"name":"inhibition of proteoglycan formation","type":"narrow"},{"name":"inhibition of proteoglycan synthesis","type":"narrow"},{"name":"negative regulation of proteoglycan anabolism","type":"exact"},{"name":"negative regulation of proteoglycan biosynthesis","type":"exact"},{"name":"negative regulation of proteoglycan formation","type":"exact"},{"name":"negative regulation of proteoglycan synthesis","type":"exact"}],"termid":"GO:1902729"}


id: GO:0031298
data:
  {"annotated_genes":["SJAG_03097","SJAG_04671","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80041,82170,101284],"is_not":false,"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"A heterotrimeric replication-pausing complex conserved in eukaryotes and associated with the replication fork; the complex stabilizes stalled replication forks and is thought to be involved in coordinating leading- and lagging-strand synthesis and in replication checkpoint signaling. Required for maximal fork speed both in vivo and in vitro.","definition_xrefs":["PMID:19819872","PMID:12944972","PMID:15367656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replication fork","termid":"GO:0043596"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02724":null,"SJAG_03097":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"replication fork protection complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FPC","type":"exact"},{"name":"Swi1-Swi3 complex","type":"narrow"},{"name":"TIMELESS-TIPIN complex","type":"narrow"},{"name":"fork pausing complex","type":"exact"}],"termid":"GO:0031298","terms_by_termid":{"GO:0031298":null}}


id: PBO:0030156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell","termid":"PBO:0030156"}


id: GO:0019631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinate catabolic process","secondary_identifiers":["MetaCyc:QUINATEDEG-PWY"],"synonyms":[{"name":"quinate breakdown","type":"exact"},{"name":"quinate catabolism","type":"exact"},{"name":"quinate degradation","type":"exact"},{"name":"quinic acid catabolic process","type":"exact"},{"name":"quinic acid catabolism","type":"exact"}],"termid":"GO:0019631"}


id: FYPO:0000162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to stress","termid":"FYPO:0000162"}


id: MONDO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the CD164 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 66","secondary_identifiers":["OMIM:616969","DOID:0110587","UMLS:C4283893","GARD:18146","MEDGEN:924418"],"synonyms":[{"name":"CD164 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA66","type":"narrow"},{"name":"autosomal dominant deafness 66","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 66","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in CD164","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 66","type":"narrow"},{"name":"deafness, autosomal dominant 66","type":"narrow"},{"name":"deafness, autosomal dominant type 66","type":"narrow"}],"termid":"MONDO:0014854","xrefs":{"Monarch":{"xref_id":"0014854"}}}


id: MONDO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing epilepsy, idiopathic generalized, in which the cause of the disease is a mutation in the GABRD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 10","secondary_identifiers":["UMLS:C2751603","DOID:0111292","MEDGEN:414062","OMIM:613060"],"synonyms":[{"name":"EIG10","type":"exact"},{"name":"GEFS+, type 5, susceptibility to","type":"related"},{"name":"GEFS+5, susceptibility to","type":"related"},{"name":"GEFSP5, susceptibility to","type":"related"},{"name":"epilepsy, idiopathic generalized, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 10","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 7","type":"related"},{"name":"generalised epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 10","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 10","type":"exact"}],"termid":"MONDO:0013103","xrefs":{"Monarch":{"xref_id":"0013103"}}}


id: GO:0016504
data:
  {"annotated_genes":["SJAG_00837","SJAG_00591","SJAG_04484","SJAG_02625","SJAG_05252","SJAG_04211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72584,77065,78711,80846],"is_not":false,"summary":null,"term":"GO:0016504"},{"annotations":[76016,79944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"peptidase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-168865"],"synonyms":[{"name":"protease activator activity","type":"narrow"}],"termid":"GO:0016504","terms_by_termid":{"GO:0016504":null,"GO:0061133":null}}


id: PR:Q9UTB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PHD finger-like domain-containing protein 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13120:SF0","OMA:SCHPO01040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ini1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.02c","secondary_identifiers":["UniProtKB:Q9UTB8"],"synonyms":[{"name":"Spom972h-PHF5A","type":"exact"}],"termid":"PR:Q9UTB8"}


id: GO:0016679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors","secondary_identifiers":["EC:1.10.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"narrow"}],"termid":"GO:0016679"}


id: GO:0070949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a symbiont cell, the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of killing of cells of another organism","termid":"GO:0051709"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated cytotoxicity","termid":"GO:0070948"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"}


id: MONDO:1012032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachycephalic airway obstruction syndrome, non-human animal","termid":"MONDO:1011924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachycephalic airway obstruction syndrome, dog","secondary_identifiers":["OMIA:000145-9615"],"termid":"MONDO:1012032","xrefs":{"Monarch":{"xref_id":"1012032"}}}


id: GO:0005074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibitory SMAD protein (obsolete GO:0005074)","synonyms":[{"name":"inhibitory SMAD protein","type":"exact"}],"termid":"GO:0005074"}


id: PBO:0077496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 215","termid":"PBO:0077496"}


id: GO:0012507
data:
  {"annotated_genes":["SJAG_03907","SJAG_05344","SJAG_03153","SJAG_04513","SJAG_01633","SJAG_01939","SJAG_00072","SJAG_04023","SJAG_00557","SJAG_00906","SJAG_02539","SJAG_03558","SJAG_02349","SJAG_00284","SJAG_05345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68767,72204,75659,77888,103018],"is_not":false,"summary":null,"term":"GO:0012507"},{"annotations":[80243,73105,78303,73227,97423,78879,76965,74771,76607,77413],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"COPII-coated ER to Golgi transport vesicle","termid":"GO:0030134"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00557":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01939":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"ER to Golgi transport vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030664"],"synonyms":[{"name":"COPII coated vesicle membrane","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"ER-Golgi transport vesicle membrane","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport vesicle membrane","type":"exact"},{"name":"endoplasmic reticulum-Golgi transport vesicle membrane","type":"exact"}],"termid":"GO:0012507","terms_by_termid":{"GO:0012507":null,"GO:0030127":null}}


id: MONDO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the laryngeal cartilage.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal cartilage cancer","secondary_identifiers":["ICD9:161.3","SCTID:363431006","DOID:13348","UMLS:C0153486","MEDGEN:509306"],"synonyms":[{"name":"cancer of laryngeal cartilage","type":"exact"},{"name":"laryngeal cartilage cancer","type":"exact"},{"name":"malignant laryngeal cartilage neoplasm","type":"exact"},{"name":"malignant neoplasm of laryngeal cartilage","type":"exact"},{"name":"malignant neoplasm of laryngeal cartilages","type":"exact"},{"name":"malignant tumor of laryngeal cartilage","type":"exact"},{"name":"malignant tumour of laryngeal cartilage","type":"exact"}],"termid":"MONDO:0001691","xrefs":{"Monarch":{"xref_id":"0001691"}}}


id: PBO:0041323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 antisense RNA 1","termid":"PBO:0041323"}


id: FYPO:0001884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of Calcofluor White than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to Calcofluor White","synonyms":[{"name":"resistance to Calcofluor White during mitotic cell cycle","type":"related"},{"name":"resistance to Calcofluor White during vegetative growth","type":"exact"},{"name":"resistant to Calcofluor White","type":"exact"}],"termid":"FYPO:0001884"}


id: GO:0140938
data:
  {"annotated_genes":["SJAG_02873","SJAG_04574","SJAG_01193","SJAG_00769","SJAG_03487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[80386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[65287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[58245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[80385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[58964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[112488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[112490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H3 = S-adenosyl-L-homocysteine + a methylated histone H3. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01193":null,"SJAG_02873":null,"SJAG_03487":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0008276","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3 methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3788745","Reactome:R-HSA-5638332","Reactome:R-HSA-5638333","Reactome:R-HSA-5159245","Reactome:R-HSA-5205799","Reactome:R-HSA-5649799","Reactome:R-HSA-4827383","Reactome:R-HSA-5649802","Reactome:R-HSA-5638141","Reactome:R-HSA-8937022","Reactome:R-HSA-8937113","Reactome:R-HSA-9842833","Reactome:R-HSA-5661117","Reactome:R-HSA-9844006","Reactome:R-HSA-5634729","Reactome:R-HSA-9844057","Reactome:R-HSA-5634802","Reactome:R-HSA-5649800","Reactome:R-HSA-5244692","Reactome:R-HSA-8936584","Reactome:R-HSA-5649801","Reactome:R-HSA-3788748","Reactome:R-HSA-5634750","Reactome:R-HSA-4827382","Reactome:R-HSA-5649764","Reactome:R-HSA-8936608","Reactome:R-HSA-5638157","Reactome:R-HSA-5637686"],"synonyms":[{"name":"histone H3 methylase activity","type":"exact"},{"name":"histone H3 methylation","type":"related"}],"termid":"GO:0140938","terms_by_termid":{"GO:0042800":null,"GO:0046975":null,"GO:0062122":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: GO:0075035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which specialized features of the symbiont appressorium are acquired post initiation, to aid in infection of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium maturation","synonyms":[{"name":"appressorium maturation on or near host","type":"exact"},{"name":"maturation of appressorium on or near host","type":"related"},{"name":"maturation of symbiont appressorium on or near host","type":"exact"}],"termid":"GO:0075035"}


id: PBO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit 6 (predicted)","termid":"PBO:0005892"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: PBO:0055217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2643","termid":"PBO:0055217"}


id: PR:Q9UUI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap145 gene.","definition_xrefs":["UniProtKB:Q9UUI3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.10c","synonyms":[{"name":"Spom972h-sap145","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI3"}


id: PBO:0046609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 11","termid":"PBO:0046609"}


id: GO:2000540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein geranylgeranylation","termid":"GO:2000539"},{"relation_name":"negatively_regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein geranylgeranylation","synonyms":[{"name":"negative regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"negative regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000540"}


id: PR:G2TRS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C713.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.13","synonyms":[{"name":"Spom972h-SPBC713.13","type":"exact"}],"termid":"PR:G2TRS5"}


id: PBO:0059773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 47","termid":"PBO:0059773"}


id: PBO:0067581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 738, pseudogene","termid":"PBO:0067581"}


id: PBO:0084057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (GAP) for Gsp1p; involved in nuclear transport","termid":"PBO:0084057"}


id: PBO:0061653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear FMR1 interacting protein 1","termid":"PBO:0061653"}


id: PBO:0074472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 1","termid":"PBO:0074472"}


id: GO:0035159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a tube in an open tracheal system is of the correct length.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size, open tracheal system","termid":"GO:0035151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube length, open tracheal system","synonyms":[{"name":"regulation of tracheal tube length","type":"exact"},{"name":"tracheal tube elongation","type":"narrow"}],"termid":"GO:0035159"}


id: PBO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035915"}


id: PBO:0046689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein dehydrogenase","termid":"PBO:0046689"}


id: GO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole metabolic process","termid":"GO:0042431"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole catabolic process","synonyms":[{"name":"indole breakdown","type":"exact"},{"name":"indole catabolism","type":"exact"},{"name":"indole degradation","type":"exact"}],"termid":"GO:0042433"}


id: PBO:0091593
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.5142627_5142628insG","termid":"PBO:0091593"}


id: GO:0080154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).","definition_xrefs":["GOC:DHL","PMID:20478994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fertilization","termid":"GO:0080154"}


id: MONDO:0700217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bacterial infection in the bloodstream of newborn infants younger than 28 days old.","definition_xrefs":["PMID:30285373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal sepsis","secondary_identifiers":["UMLS:C0456103","MEDGEN:96816"],"termid":"MONDO:0700217","xrefs":{"Monarch":{"xref_id":"0700217"}}}


id: GO:0140128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone H1 or a form modified by a post-translational modification on a specific residue. The most common PTMs on histones are methylation, acetylation and phosphorylation.","definition_xrefs":["PMID:17540172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0030674","GO:0140566","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"histone H1 reader activity","termid":"GO:0140128"}


id: GO:1990897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that phosphorylates serine 2 residues in the CTD domain of productively elongating large subunits of DNA-directed RNA polymerase II, holoenzyme. In S. cerevisiae this complex consists of CTK1/CTK2/CTK3, in S. pombe Lsk1/Lsc1/Lsg1. Human CTK1 homologs include CDK12/13.","definition_xrefs":["PMID:24879308","PMID:20952539"],"gene_count":0,"genotype_count":0,"name":"obsolete CTDK-1 complex (obsolete GO:1990897)","termid":"GO:1990897"}


id: PBO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_enfumafungin","termid":"PBO:0031347"}


id: PBO:0081209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 1","termid":"PBO:0081209"}


id: PBO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc epsilon receptor Ig","termid":"PBO:0047427"}


id: PATO:0025001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potability","termid":"PATO:0025000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-potable","synonyms":[{"name":"undrinkable","type":"exact"}],"termid":"PATO:0025001"}


id: PBO:0064604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 2","termid":"PBO:0064604"}


id: GO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic (S)-hydroxynitrile = an aromatic aldehyde + cyanide.","definition_xrefs":["RHEA:54660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aromatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["MetaCyc:RXN-11732","KEGG_REACTION:R09359"],"termid":"GO:0052892"}


id: MONDO:0044300
data:
  {"annotated_genes":["SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88990],"is_not":false,"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"An autosomal recessive tumor predisposition syndrome characterized by the development of multiple colonic adenomas in adulthood, often with progression to colorectal cancer. Proliferative lesions in other tissues may also occur.","definition_xrefs":["OMIM:617100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01419":null},"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17868","MEDGEN:934686","DOID:0080412","Orphanet:480536","UMLS:C4310719"],"synonyms":[{"name":"FAP4","type":"exact"},{"name":"MSH3-related AFAP","type":"exact"},{"name":"MSH3-related attenuated FAP","type":"exact"},{"name":"MSH3-related attenuated familial adenomatous polyposis","type":"exact"},{"name":"MSH3-related attenuated familial polyposis coli","type":"exact"},{"name":"familial adenomatous polyposis 4","type":"exact"},{"name":"familial adenomatous polyposis type 4","type":"exact"}],"termid":"MONDO:0044300","terms_by_termid":{"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0044300"}}}


id: PBO:0042279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated","termid":"PBO:0042279"}


id: MONDO:0021543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the gingiva.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of gum","termid":"MONDO:0021491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of gingiva","secondary_identifiers":["ICD9:228.09","UMLS:C0582885","NCIT:C4831","MEDGEN:108426","SCTID:304990002"],"synonyms":[{"name":"angioma of gingiva","type":"exact"},{"name":"angioma of gum","type":"exact"},{"name":"angioma of the gingiva","type":"exact"},{"name":"angioma of the gum","type":"exact"},{"name":"gingiva hemangioma","type":"exact"},{"name":"gingival angioma","type":"exact"},{"name":"gingival hemangioma","type":"exact"},{"name":"gum angioma","type":"exact"},{"name":"gum hemangioma","type":"exact"},{"name":"hemangioma of gum","type":"exact"},{"name":"hemangioma of the gingiva","type":"exact"},{"name":"hemangioma of the gum","type":"exact"}],"termid":"MONDO:0021543","xrefs":{"Monarch":{"xref_id":"0021543"}}}


id: GO:0048787
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters.","definition_xrefs":["PMID:12812759","PMID:3152289","PMID:12923177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone membrane","secondary_identifiers":["NIF_Subcellular:sao2038461087"],"synonyms":[{"name":"active zone plasma membrane","type":"exact"},{"name":"active zone pre-synaptic plasma membrane","type":"exact"},{"name":"active zone presynaptic plasma membrane","type":"exact"},{"name":"pre-synaptic active zone membrane","type":"exact"}],"termid":"GO:0048787"}


id: MONDO:0004420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor characterized by malignant transformation of an eccrine spiradenoma of the breast.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant spiradenoma","termid":"MONDO:0004412"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"breast malignant eccrine spiradenoma","secondary_identifiers":["NCIT:C5180","UMLS:C1334565","DOID:7983","MEDGEN:277329"],"synonyms":[{"name":"breast malignant spiradenoma","type":"exact"},{"name":"malignant breast eccrine spiradenoma","type":"exact"},{"name":"malignant eccrine spiradenoma of breast","type":"exact"},{"name":"malignant eccrine spiradenoma of the breast","type":"exact"},{"name":"malignant spiradenoma of breast","type":"exact"}],"termid":"MONDO:0004420","xrefs":{"Monarch":{"xref_id":"0004420"}}}


id: MOD:00252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue to the polymer keratan sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:3472204","PubMed:1417734","RESID:AA0247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"keratan sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","synonyms":[{"name":"keratan sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","type":"exact"},{"name":"keratosulfate","type":"exact"},{"name":"poly[beta-1,4-(2-acetamido-2-deoxy-6-sulfate D-glucosyl)-beta-1,3-D-galactosyl]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-threonine","type":"exact"}],"termid":"MOD:00252"}


id: GO:0051678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pullulan catabolic process","termid":"GO:0051678"}


id: MONDO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iris melanoma characterized by the presence of intermediate cells which are similar to but smaller than epithelioid cells.","definition_xrefs":["NCIT:C6101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate cell type uveal melanoma","termid":"MONDO:0004062"},{"relation_name":"is_a","term_name":"iris melanoma","termid":"MONDO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"intermediate cell type iris melanoma","secondary_identifiers":["MEDGEN:233564","UMLS:C1334210","DOID:6993"],"synonyms":[{"name":"Intermediate cell type iris melanoma","type":"exact"},{"name":"intermediate cell type uveal melanoma of iris","type":"exact"},{"name":"iris intermediate cell type uveal melanoma","type":"exact"},{"name":"iris mixed cell melanoma","type":"related"}],"termid":"MONDO:0004063","xrefs":{"Monarch":{"xref_id":"0004063"}}}


id: PATO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000343 gametophyte incompatible value (obsolete PATO:0000343)","termid":"PATO:0000343"}


id: CHEBI:28938
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium","termid":"CHEBI:28938"}


id: GO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A constituent of the extracellular matrix that facilitates attachment of cells to the matrix.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesive extracellular matrix constituent (obsolete GO:0030022)","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"exact"}],"termid":"GO:0030022"}


id: MONDO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discrete papular lichen myxedematosus is a rare chronic, slowly progressive form of localized lichen myxedematosus characterized by the development of a few to multiple small symmetrical skin-coloured mucinous papules on the limbs and trunk.","definition_xrefs":["Orphanet:90394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"discrete papular lichen myxedematosus","secondary_identifiers":["GARD:19138","SCTID:717258005","UMLS:C4273967","MEDGEN:898313"],"termid":"MONDO:0019579","xrefs":{"Monarch":{"xref_id":"0019579"}}}


id: PBO:0005777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18 (predicted)","termid":"PBO:0005777"}


id: MONDO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectovesical fistula (obsolete MONDO:0035784)","secondary_identifiers":["Orphanet:600984"],"termid":"MONDO:0035784","xrefs":{"Monarch":{"xref_id":"0035784"}}}


id: GO:1904473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-dopa stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25044243","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-dopa","termid":"GO:1904473"}


id: PBO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by P. carnii Brl1","termid":"PBO:0001777"}


id: GO:0009127
data:
  {"annotated_genes":["SJAG_03140","SJAG_01070","SJAG_01814","SJAG_02364","SJAG_00964","SJAG_00044","SJAG_01661","SJAG_02850","SJAG_06634","SJAG_04123","SJAG_01859","SJAG_03355","SJAG_04681","SJAG_01298","SJAG_01081","SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80750,78764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[57122,65405,58263,66780,71677,73353,78539,60495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[75706,57274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59782,63868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[77416,103136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[77417,65924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[77418,110254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside monophosphate anabolism","type":"exact"},{"name":"purine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine nucleoside monophosphate formation","type":"exact"},{"name":"purine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009127","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: PBO:0030544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cAMP_level","termid":"PBO:0030544"}


id: PBO:0044352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 39","termid":"PBO:0044352"}


id: PBO:0085117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA","termid":"PBO:0085117"}


id: PBO:0055257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2684","termid":"PBO:0055257"}


id: MONDO:1011526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic lipidosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic lipidosis, non-human animal","termid":"MONDO:1011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lipidosis, cattle","secondary_identifiers":["OMIA:000605-9913"],"termid":"MONDO:1011526","xrefs":{"Monarch":{"xref_id":"1011526"}}}


id: MONDO:0024574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary or acquired coagulation disorder characterized by a qualitative or quantitative deficiency of the von Willebrand factor. The latter plays an important role in platelet adhesion. Signs and symptoms include bruises, nose bleeding, gum bleeding following a dental procedure, heavy menstrual bleeding, and gastrointestinal bleeding.","definition_xrefs":["NCIT:C68677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease (hereditary or acquired)","secondary_identifiers":["MEDGEN:22686","ICD9:286.4","NANDO:2200682","SCTID:128105004","MESH:D014842","ICD10CM:D68.0","UMLS:C0042974"],"synonyms":[{"name":"VWD","type":"exact"},{"name":"Von Willebrand Disease","type":"exact"},{"name":"von Willebrand disease","type":"related"},{"name":"von Willebrand disorder","type":"exact"},{"name":"von Willebrand's disease","type":"exact"}],"termid":"MONDO:0024574","xrefs":{"Monarch":{"xref_id":"0024574"}}}


id: FYECO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which acetaldehyde was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ acetaldehyde","termid":"FYECO:0000361"}


id: MONDO:0015496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of an excessively large tongue, which may be congenital or may develop as a result of a tumor or edema due to obstruction of lymphatic vessels, or it may occur in association with hyperpituitarism or acromegaly. It also may be associated with malocclusion because of pressure of the tongue on the teeth. (From Jablonski, Dictionary of Dentistry, 1992)","definition_xrefs":["MESH:D008260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroglossia","secondary_identifiers":["GARD:3342","MedDRA:10025391","icd11.foundation:670519908","UMLS:C0024421","Orphanet:156207","MEDGEN:44236"],"synonyms":[{"name":"enlarged tongue","type":"related"},{"name":"giant tongue","type":"related"}],"termid":"MONDO:0015496","xrefs":{"Monarch":{"xref_id":"0015496"}}}


id: PBO:0055933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 39","termid":"PBO:0055933"}


id: GO:0098790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transcription of non-coding RNA associated with transcriptional start and end sites of protein coding genes. This occurs at some low level for many protein coding genes.","definition_xrefs":["PMID:20502517"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA transcription associated with protein coding gene TSS/TES (obsolete GO:0098790)","synonyms":[{"name":"pasRNA transcription","type":"narrow"}],"termid":"GO:0098790"}


id: PBO:0058694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6822","termid":"PBO:0058694"}


id: GO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cytokine stimulus","secondary_identifiers":["Reactome:R-HSA-9007892","Reactome:R-HSA-9008059"],"termid":"GO:0071345"}


id: PBO:0084198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone methyltransferase, subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3K4; Set1p-dependent H3K4 trimethylation recruits Nrd1p, allowing efficient termination of snoRNAs and cryptic unstable transcripts (CUTs) by Nrd1p-Nab3p-Sen1p pathway; modulates histone acetylation levels in promoter proximal regions to ensure efficient Nrd1p-dependent termination; required in transcriptional silencing near telomeres and at silent mating type loci; has a SET domain","termid":"PBO:0084198"}


id: GO:0045116
data:
  {"annotated_genes":["SJAG_05297","SJAG_00033","SJAG_00615","SJAG_00878","SJAG_01018","SJAG_03950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73123,74662,75936,76838,81477,91127],"is_not":false,"summary":null,"term":"GO:0045116"}]},"cv_name":"biological_process","definition":"Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein.","definition_xrefs":["PMID:11698580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00615":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_03950":null,"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein neddylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019943"],"synonyms":[{"name":"RUB1-protein conjugation","type":"exact"}],"termid":"GO:0045116","terms_by_termid":{"GO:0045116":null}}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: MONDO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-craniofacioskeletal syndrome is a rare, hereditary, syndromic intellectual disability characterized by craniofacial and skeletal abnormalities in association with mild intellectual disability in females and early postnatal lethality in males. In addition to mild cognitive impairment, females present with microcephaly, short stature, skeletal features and extra temporal lobe gyrus. In males, intrauterine growth impairment, cardiac and urogenital anomalies have been reported.","definition_xrefs":["Orphanet:163979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-craniofacioskeletal syndrome","secondary_identifiers":["MESH:C567471","OMIM:300712","UMLS:C2678036","GARD:17009","MEDGEN:394716"],"synonyms":[{"name":"craniofacioskeletal syndrome","type":"related"},{"name":"craniofacioskeletal syndrome, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0010412","xrefs":{"Monarch":{"xref_id":"0010412"}}}


id: PBO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 10","termid":"PBO:0070831"}


id: PR:O59770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04533","PANTHER:PTHR11599:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.04c","secondary_identifiers":["UniProtKB:O59770"],"synonyms":[{"name":"Spom972h-PSMA3","type":"exact"}],"termid":"PR:O59770"}


id: PBO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R","termid":"PBO:0050442"}


id: PBO:0073872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member C2 (putative)","termid":"PBO:0073872"}


id: MONDO:0700076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFDH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0002525","MONDO:0004069"],"is_obsolete":false,"name":"glutaric acidemia IIc","secondary_identifiers":["MEDGEN:479786","UMLS:C3278156"],"synonyms":[{"name":"ETFDH deficiency","type":"exact"},{"name":"GA2C","type":"exact"},{"name":"glutaric acidemia 2C","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFDH","type":"exact"}],"termid":"MONDO:0700076","xrefs":{"Monarch":{"xref_id":"0700076"}}}


id: MONDO:0800487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any idiopathic generalized epilepsy syndrome that has a variable-age onset.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"variable age epilepsy syndrome","termid":"MONDO:0100619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"variable-age onset idiopathic generalized epilepsy syndrome","termid":"MONDO:0800487","xrefs":{"Monarch":{"xref_id":"0800487"}}}


id: PBO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb1","termid":"PBO:0090656"}


id: GO:0102800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: anthocyanidin 3,5-di-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-(6-O-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl-CoA:pelargonidin-3,5-diglucoside-6''-O-acyltransferase activity (obsolete GO:0102800)","termid":"GO:0102800"}


id: FYPO:0005499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a lower extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"decreased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"},{"name":"expression of CRE target genes decreased during cellular response to miconazole","type":"related"}],"termid":"FYPO:0005499"}


id: PBO:0083615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein intermediate chain, microtubule motor protein; required for intracellular transport and cell division; acts in cytoplasmic dynein pathway; forms complex with dynein light chain Dyn2p that promotes Dyn1p homodimerization and potentiates motor processivity; Dyn2p-Pac11p complex is also important for interaction of dynein motor complex with dynactin complex; forms cortical cytoplasmic microtubule capture site with Num1p; essential in the absence of CIN8","termid":"PBO:0083615"}


id: MONDO:0859188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain abnormalities","secondary_identifiers":["OMIM:619517","MEDGEN:1794189","UMLS:C5561979"],"termid":"MONDO:0859188","xrefs":{"Monarch":{"xref_id":"0859188"}}}


id: FYPO:0003631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is decreased. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["PomBase:mah","GO:1903241","GO:0071004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased U2-type prespliceosome assembly","synonyms":[{"name":"decreased U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased U2-type prespliceosome assembly during vegetative growth","type":"exact"},{"name":"reduced U2-type prespliceosome assembly","type":"exact"}],"termid":"FYPO:0003631"}


id: GO:0071629
data:
  {"annotated_genes":["SJAG_02341","SJAG_00173","SJAG_01556","SJAG_00552","SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109984,111629,111736,112325,115633],"is_not":false,"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:20080635","GOC:rb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"is_a","term_name":"cytoplasm protein quality control","termid":"GO:0140455"},{"relation_name":"part_of","term_name":"cellular response to misfolded protein","termid":"GO:0071218"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"cytoplasm protein quality control by the ubiquitin-proteasome system","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"cytoplasm-associated proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome","type":"exact"}],"termid":"GO:0071629","terms_by_termid":{"GO:0071629":null}}


id: PBO:0043175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIR1 pseudogene 2","termid":"PBO:0043175"}


id: GO:0017083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-fucose + beta-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R = GDP + 1,4-beta-D-galactosyl-(1,4)-[alpha-L-fucosyl-(1,3)]-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.152","RHEA:14257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["MetaCyc:GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"GDP-L-fucose:1,4-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 3-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:1,4-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 3-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:1,4-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 3-alpha-L-fucosyltransferase activity","type":"related"},{"name":"Lewis-negative alpha-3-fucosyltransferase activity","type":"narrow"},{"name":"galactoside 3-L-fucosyltransferase activity","type":"exact"},{"name":"galactoside 3-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glucoside alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glucoside alpha1->3-fucosyltransferase activity","type":"related"},{"name":"plasma alpha-3-fucosyltransferase activity","type":"narrow"}],"termid":"GO:0017083"}


id: PBO:0030148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gamma-glutamyltransferase_activity","termid":"PBO:0030148"}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["GOC:rz","PMID:20805556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: FYPO:0006835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,3-beta-glucanase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glucan endo-1,3-beta-glucanase activity","synonyms":[{"name":"normal glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group","type":"exact"}],"termid":"FYPO:0006835"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: MONDO:0016011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal alcohol syndrome (FAS) is a rare malformation syndrome caused by excessive maternal consumption of alcohol during pregnancy. It is characterized by prenatal and/or postnatal growth deficiency (weight and/or height <10th percentile), a unique cluster of minor facial anomalies (short palpebral fissures, flat and smooth philtrum, and thin upper lip) and severe central nervous system (CNS) abnormalities including microcephaly, and cognitive and behavioral impairment (intellectual disability, deficit in general cognition, learning and language, executive function, visual-spatial processing, memory, and attention).","definition_xrefs":["Orphanet:1915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal alcohol spectrum disorder","termid":"MONDO:0000408"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal alcohol syndrome","secondary_identifiers":["UMLS:C0015923","GARD:599","NCIT:C84713","MEDGEN:8820","icd11.foundation:362980699","DOID:0050667","MedDRA:10016845","SCTID:205788004","DOID:0050665"],"synonyms":[{"name":"ARBD","type":"exact"},{"name":"ARND","type":"exact"},{"name":"FAS","type":"exact"},{"name":"FASD","type":"broad"},{"name":"alcohol-related birth defects","type":"related"},{"name":"alcohol-related neurodevelopmental disorder","type":"exact"},{"name":"fetal alcohol spectrum disorders","type":"broad"},{"name":"foetal alcohol spectrum disorders","type":"broad"},{"name":"static encephalopathy","type":"related"}],"termid":"MONDO:0016011","xrefs":{"Monarch":{"xref_id":"0016011"}}}


id: PR:Q9P7W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ARM-like repeat-containing protein C1703.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.03c","synonyms":[{"name":"Spom972h-syo2","type":"exact"}],"termid":"PR:Q9P7W7"}


id: PBO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 17 subfamily A member 1","termid":"PBO:0044474"}


id: GO:0052398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont phytoalexin production (obsolete GO:0052398)","synonyms":[{"name":"activation by organism of symbiont phytoalexin production","type":"exact"},{"name":"induction by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052398"}


id: GO:0090581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in).","definition_xrefs":["PMID:14645248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity","termid":"GO:0090581"}


id: PR:Q9HDT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.02c gene.","definition_xrefs":["UniProtKB:Q9HDT7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein P20C8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.02c","synonyms":[{"name":"Spom972h-SPCP20C8.02c","type":"exact"}],"termid":"PR:Q9HDT7"}


id: MONDO:0006476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma without evidence of differentiation arising from the gallbladder. The most common variant is the spindle and giant cell type which resembles a sarcoma.","definition_xrefs":["NCIT:C9167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated gallbladder carcinoma","secondary_identifiers":["MEDGEN:76010","EFO:1000604","UMLS:C0279653"],"synonyms":[{"name":"anaplastic carcinoma of gallbladder","type":"exact"},{"name":"anaplastic carcinoma of the gallbladder","type":"exact"},{"name":"anaplastic gallbladder carcinoma","type":"exact"},{"name":"gall bladder undifferentiated carcinoma","type":"exact"},{"name":"gallbladder undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of gallbladder","type":"exact"},{"name":"undifferentiated carcinoma of the gallbladder","type":"exact"},{"name":"undifferentiated gallbladder cancer","type":"exact"},{"name":"undifferentiated gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0006476","xrefs":{"Monarch":{"xref_id":"0006476"}}}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: PBO:0091360
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human HRAS","termid":"PBO:0091360"}


id: PBO:0053236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 2","termid":"PBO:0053236"}


id: PBO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8 like 1","termid":"PBO:0044602"}


id: PBO:0113241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein; anchored to nuclear inner membrane, interacts with vacuolar membrane protein Vac8p to promote formation of nucleus-vacuole junctions during piecemeal microautophagy of the nucleus (PMN); targeted to vacuole via AP-3 pathway","termid":"PBO:0113241"}


id: PATO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000581 relative weight value (obsolete PATO:0000581)","termid":"PATO:0000581"}


id: PBO:0046659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extra spindle pole bodies like 1, separase","termid":"PBO:0046659"}


id: GO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type I hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type I hypersensitivity","termid":"GO:0001810"}


id: GO:0010150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of leaf development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:17177638","ISBN:0387987819","PMID:34938309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf senescence","termid":"GO:0010150"}


id: MOD:01479
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 4'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-fluoro-L-tryptophan","synonyms":[{"name":"4-fluorotryptophan","type":"exact"}],"termid":"MOD:01479"}


id: FYPO:0004957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered level of substance in mitochondrion","synonyms":[{"name":"abnormal level of substance in mitochondrion","type":"exact"},{"name":"abnormal level of substance in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial level of substance","type":"exact"},{"name":"altered level of substance in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial level of substance","type":"exact"}],"termid":"FYPO:0004957"}


id: PBO:0029017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere","termid":"PBO:0029017"}


id: PBO:0040330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 5","termid":"PBO:0040330"}


id: FYPO:0002946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall","synonyms":[{"name":"cell wall defects","type":"exact"}],"termid":"FYPO:0002946"}


id: GO:1902654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aromatic primary alcohol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:19219878","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aromatic primary alcohol metabolic process","synonyms":[{"name":"aromatic primary alcohol metabolism","type":"exact"}],"termid":"GO:1902654"}


id: MONDO:0019027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of frontootopalatodigital syndrome, characterized by deafness, cleft palate, and characteristic digital anomalies. OPD syndrome is divided into two forms based on severity: the milder form designated OPD type 1 (OPD1), and the more severe and often lethal form designated OPD type 2 (OPD2). OPD is an X-linked disorder. Two other genetic disorders with features overlapping OPD, frontometaphyseal dysplasia (FMD) and osteodysplasty, Melnick-Needles type (MNS) have been described; thus OPD1, OPD2, FMD, and MNS are allelic disorders.","definition_xrefs":["Orphanet:669"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete branchial arch or oral-acral syndrome (obsolete MONDO:0015334)","termid":"MONDO:0015334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome spectrum disorder","termid":"MONDO:0018233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome","secondary_identifiers":["GARD:7293","UMLS:C5779873","MEDGEN:1843451","icd11.foundation:1506946342","SCTID:767130007"],"synonyms":[{"name":"oto-palatal-digital syndrome","type":"exact"},{"name":"oto-palato-digital syndrome","type":"exact"},{"name":"type 2 (Andre syndrome)","type":"narrow"}],"termid":"MONDO:0019027","xrefs":{"Monarch":{"xref_id":"0019027"}}}


id: GO:1905645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of FACT complex assembly.","definition_xrefs":["GOC:TermGenie","PMID:20889714","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of FACT complex assembly","termid":"GO:1905644"},{"relation_name":"negatively_regulates","term_name":"FACT complex assembly","termid":"GO:1905635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of FACT complex assembly","synonyms":[{"name":"down regulation of FACT complex assembly","type":"exact"},{"name":"down regulation of FACT complex formation","type":"exact"},{"name":"down regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"down regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"down-regulation of FACT complex assembly","type":"exact"},{"name":"down-regulation of FACT complex formation","type":"exact"},{"name":"down-regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"down-regulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"downregulation of FACT complex assembly","type":"exact"},{"name":"downregulation of FACT complex formation","type":"exact"},{"name":"downregulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"downregulation of Facilitates chromatin transcription complex formation","type":"exact"},{"name":"inhibition of FACT complex assembly","type":"narrow"},{"name":"inhibition of FACT complex formation","type":"narrow"},{"name":"inhibition of Facilitates chromatin transcription complex assembly","type":"narrow"},{"name":"inhibition of Facilitates chromatin transcription complex formation","type":"narrow"},{"name":"negative regulation of FACT complex formation","type":"exact"},{"name":"negative regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"negative regulation of Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905645"}


id: GO:0016242
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108624],"is_not":false,"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"negatively_regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of macroautophagy","type":"exact"},{"name":"down-regulation of macroautophagy","type":"exact"},{"name":"downregulation of macroautophagy","type":"exact"},{"name":"inhibition of macroautophagy","type":"narrow"},{"name":"negative regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016242","terms_by_termid":{"GO:0016242":null}}


id: MONDO:0010053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spherocytosis in which the cause of the disease is a mutation in the SPTA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spherocytosis","termid":"MONDO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hereditary spherocytosis type 3","secondary_identifiers":["DOID:0110918","MEDGEN:394798","MESH:C567489","OMIM:270970","GARD:15236","UMLS:C2678338"],"synonyms":[{"name":"HS3","type":"exact"},{"name":"SPH3","type":"exact"},{"name":"SPTA1 hereditary spherocytosis","type":"exact"},{"name":"hereditary spherocytosis 3","type":"exact"},{"name":"hereditary spherocytosis caused by mutation in SPTA1","type":"exact"},{"name":"spherocytosis, hereditary, 3","type":"related"},{"name":"spherocytosis, type 3","type":"related"}],"termid":"MONDO:0010053","xrefs":{"Monarch":{"xref_id":"0010053"}}}


id: PBO:0080408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37B subunit of ESCRT-I","termid":"PBO:0080408"}


id: GO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075207)","synonyms":[{"name":"negative regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075207"}


id: PBO:0078712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-7","termid":"PBO:0078712"}


id: PBO:0056379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 10","termid":"PBO:0056379"}


id: PBO:0053873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1149","termid":"PBO:0053873"}


id: PR:O43069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like modifier-activating enzyme ATG7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03355","PRO:DNx","PANTHER:PTHR10953:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like modifier-activating enzyme atg7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.05c","secondary_identifiers":["UniProtKB:O43069"],"synonyms":[{"name":"ATG12-activating enzyme E1 atg7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATG7","type":"exact"},{"name":"autophagy-related protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43069"}


id: PBO:0041132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 10 pseudogene 2","termid":"PBO:0041132"}


id: GO:0035834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole alkaloid metabolic process","synonyms":[{"name":"indole alkaloid metabolism","type":"exact"}],"termid":"GO:0035834"}


id: PBO:0048420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain containing 1","termid":"PBO:0048420"}


id: PBO:0078177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2","termid":"PBO:0078177"}


id: PBO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin","termid":"PBO:0002496"}


id: MOD:01554
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01554"}


id: PBO:0071121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 123","termid":"PBO:0071121"}


id: GO:0042636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair.","definition_xrefs":["GOC:go_curators","PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair cycle","termid":"GO:0042634"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"hair cycle","termid":"GO:0042633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair cycle","synonyms":[{"name":"down regulation of hair cycle","type":"exact"},{"name":"down-regulation of hair cycle","type":"exact"},{"name":"downregulation of hair cycle","type":"exact"},{"name":"inhibition of hair cycle","type":"narrow"}],"termid":"GO:0042636"}


id: MONDO:0100599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in which the cause of the disease is a variant in the COL1A1 gene. This includes classic and arthrochalasia types as well as combined osteogenesis imperfecta and Ehlers-Danlos syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599","xrefs":{"Monarch":{"xref_id":"0100599"}}}


id: PBO:0079033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 2-1","termid":"PBO:0079033"}


id: GO:0061303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cornea over time, from its formation to the mature structure. The cornea is the transparent structure that covers the anterior of the eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cornea development in camera-type eye","termid":"GO:0061303"}


id: GO:0060188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein desumoylation","termid":"GO:0060188"}


id: GO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(L-gamma-glutamylamino)butanoate + H2O = 4-aminobutanoate + L-glutamate.","definition_xrefs":["RHEA:19737","EC:3.5.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl-gamma-aminobutyrate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07419","MetaCyc:RXN0-3942"],"synonyms":[{"name":"4-(glutamylamino)butanoate amidohydrolase activity","type":"related"},{"name":"PuuD","type":"related"},{"name":"YcjL","type":"related"},{"name":"gamma-glutamyl-GABA hydrolase activity","type":"related"}],"termid":"GO:0033969"}


id: PBO:0082151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase that converts diacylglycerol to triacylglycerol (TGA); one of several acyltransferases that contribute to TGA synthesis; relocates from ER to nuclear membrane in response cell cycle and starvation signals; Lro1p and Dga1p can O-acylate ceramides; putative homolog of human lecithin cholesterol acyltransferase","termid":"PBO:0082151"}


id: GO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"basement membrane assembly","termid":"GO:0070831"}


id: GO:1905699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:TermGenie","GO_REF:0000058","PMID:15198509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"regulation of drug transmembrane export","type":"narrow"},{"name":"regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905699"}


id: MOD:01497
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01497"}


id: PBO:0054055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1397","termid":"PBO:0054055"}


id: PBO:0072802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 1","termid":"PBO:0072802"}


id: GO:0080153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the reductive pentose-phosphate cycle.","definition_xrefs":["PMID:17031544","PMID:20399532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of reductive pentose-phosphate cycle","termid":"GO:0080152"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis","termid":"GO:1905156"},{"relation_name":"negatively_regulates","term_name":"reductive pentose-phosphate cycle","termid":"GO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of reductive pentose-phosphate cycle","synonyms":[{"name":"negative regulation of C3 photosynthesis","type":"narrow"},{"name":"negative regulation of Calvin cycle","type":"narrow"}],"termid":"GO:0080153"}


id: MONDO:0020436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect, sinus venosus type","secondary_identifiers":["GARD:10696","NANDO:2200267","Orphanet:99105","icd11.foundation:1930019148","SCTID:95268002","MEDGEN:138011","MESH:C548009","UMLS:C0344730"],"synonyms":[{"name":"ASD, sinus venosus type","type":"exact"},{"name":"atrial septal defect sinus venosus","type":"related"},{"name":"sinus venosus ASD","type":"related"},{"name":"sinus venosus atrial septal defects","type":"related"}],"termid":"MONDO:0020436","xrefs":{"Monarch":{"xref_id":"0020436"}}}


id: GO:0032642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine production","secondary_identifiers":["GO:0090196","GO:0045073"],"synonyms":[{"name":"regulation of chemokine biosynthetic process","type":"narrow"},{"name":"regulation of chemokine secretion","type":"narrow"}],"termid":"GO:0032642"}


id: PBO:0080758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG pseudogene, Y-linked 1","termid":"PBO:0080758"}


id: PBO:0086982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; VTC complex is involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; also has mRNA binding activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0086982"}


id: FYPO:0005034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during nitrogen starvation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"decreased protein phosphorylation during nitrogen deprivation","type":"exact"},{"name":"reduced protein phosphorylation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005034"}


id: PBO:0066022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 3","termid":"PBO:0066022"}


id: MONDO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary fructose intolerance syndrome (obsolete MONDO:0004906)","termid":"MONDO:0004906","xrefs":{"Monarch":{"xref_id":"0004906"}}}


id: PR:Q9USM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04489","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.10c","secondary_identifiers":["UniProtKB:Q9USM6"],"synonyms":[{"name":"Spom972h-CYB5A","type":"exact"}],"termid":"PR:Q9USM6"}


id: MONDO:0011175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Friedreich ataxia with the locus FRDA2, which has linkage to chromosome 9p23-p11","definition_xrefs":["OMIM:601992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Friedreich ataxia","termid":"MONDO:0100339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Friedreich ataxia 2","secondary_identifiers":["DOID:0111219","MEDGEN:356134","UMLS:C1865981","GARD:15340","MESH:C566594"],"synonyms":[{"name":"FRDA2","type":"exact"},{"name":"Friedreich ataxia 2","type":"exact"}],"termid":"MONDO:0011175","xrefs":{"Monarch":{"xref_id":"0011175"}}}


id: GO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse maturation","termid":"GO:0090128"},{"relation_name":"positively_regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse maturation","termid":"GO:0090129"}


id: PBO:0017643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase involved in fatty acid elongation (predicted)","termid":"PBO:0017643"}


id: GO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an alpha-beta T cell. An alpha-beta T cell is a T cell that expresses an alpha-beta T cell receptor complex.","definition_xrefs":["GOC:ai","CL:0000789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation","synonyms":[{"name":"alpha-beta T cell development","type":"related"},{"name":"alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"alpha-beta T-cell differentiation","type":"exact"},{"name":"alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046632"}


id: PR:P79011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIE subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIE subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.08c","secondary_identifiers":["UniProtKB:P79011"],"synonyms":[{"name":"Spom972h-GTF2E2","type":"exact"},{"name":"TFIIE-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79011"}


id: PBO:0088474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Erg28 protein","termid":"PBO:0088474"}


id: MONDO:0014693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the LZTR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"Noonan syndrome 10","secondary_identifiers":["UMLS:C4225280","DOID:0060588","GARD:16139","MEDGEN:902892","NCIT:C176938","OMIM:616564"],"synonyms":[{"name":"LZTR1 Noonan syndrome","type":"exact"},{"name":"NS10","type":"exact"},{"name":"Noonan syndrome 10","type":"exact"},{"name":"Noonan syndrome caused by mutation in LZTR1","type":"exact"},{"name":"Noonan syndrome type 10","type":"exact"}],"termid":"MONDO:0014693","xrefs":{"Monarch":{"xref_id":"0014693"}}}


id: GO:0019602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 3-hydroxytoluene (m-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-3-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 3-hydroxytoluene","termid":"GO:0019602"}


id: GO:0015336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Fe2+, Mn2+, Zn2+, Cu2+, Cd2+, Ni2+ or Co2+.","definition_xrefs":["TC:2.A.55.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete high affinity metal ion uptake transporter activity (obsolete GO:0015336)","synonyms":[{"name":"high affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015336"}


id: PBO:0062482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 1","termid":"PBO:0062482"}


id: PBO:0079850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-80 homolog, NALCN channel complex subunit","termid":"PBO:0079850"}


id: GO:0140031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon phosphorylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}


id: PR:Q9URY1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk16 gene.","definition_xrefs":["UniProtKB:Q9URY1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.03","synonyms":[{"name":"Spom972h-ppk16","type":"exact"},{"name":"meiotically up-regulated gene 92 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY1"}


id: MONDO:0009841
data:
  {"annotated_genes":["SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87973],"is_not":false,"summary":null,"term":"MONDO:0009841"}]},"cv_name":"mondo","definition":"PEHO (Progressive encephalopathy with Edema, Hypsarrhythmia and Optic atrophy) syndrome is a rare neurodegenerative disorder belonging to the group of infantile progressive encephalopathies.","definition_xrefs":["Orphanet:2836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"PEHO syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:342404","UMLS:C1850055","MESH:C536317","DOID:0080539","GARD:4264","icd11.foundation:976613527","OMIM:260565"],"synonyms":[{"name":"infantile Cerebellooptic atrophy","type":"related"},{"name":"peho","type":"related"},{"name":"peho syndrome","type":"exact"},{"name":"peho-like syndrome","type":"related"},{"name":"progressive encephalopathy with edema, hypsarrhythmia and optic atrophy","type":"exact"},{"name":"progressive encephalopathy with edema, hypsarrhythmia, and optic atrophy","type":"related"},{"name":"progressive encephalopathy-optic atrophy syndrome","type":"exact"}],"termid":"MONDO:0009841","terms_by_termid":{"MONDO:0009841":null},"xrefs":{"Monarch":{"xref_id":"0009841"}}}


id: FYECO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium arsenite (NaAsO2) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaAsO2","synonyms":[{"name":"sodium arsenite added","type":"exact"}],"termid":"FYECO:0000297"}


id: GO:0031332
data:
  {"annotated_genes":["SJAG_03916","SJAG_04061","SJAG_02594","SJAG_03706","SJAG_02621","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65782],"is_not":false,"summary":null,"term":"GO:0031332"},{"annotations":[90646,63657,120121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033167"},{"annotations":[114212,93158,120127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.","definition_xrefs":["PMID:14704433","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_03042":null,"SJAG_03706":null,"SJAG_03916":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNAi effector complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0031332","terms_by_termid":{"GO:0030958":null,"GO:0031332":null,"GO:0033167":null}}


id: PBO:0079308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4","termid":"PBO:0079308"}


id: MONDO:0014560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the AMBN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1F","secondary_identifiers":["MEDGEN:898597","UMLS:C4225394","GARD:16076","OMIM:616270","DOID:0110065"],"synonyms":[{"name":"AI1F","type":"exact"},{"name":"AMBN amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in AMBN","type":"exact"},{"name":"amelogenesis imperfecta hypoplastic type IF","type":"exact"},{"name":"amelogenesis imperfecta type IF","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic type 1F","type":"related"},{"name":"amelogenesis imperfecta, type 1F","type":"related"},{"name":"amelogenesis imperfecta, type IF","type":"related"}],"termid":"MONDO:0014560","xrefs":{"Monarch":{"xref_id":"0014560"}}}


id: PBO:0035916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_astral_microtubules","termid":"PBO:0035916"}


id: GO:0035291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the intercalary segment of the anterior head, following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:10477305","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"anterior head segmentation","termid":"GO:0035288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, intercalary segment","termid":"GO:0035291"}


id: PBO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0032740"}


id: MONDO:0850105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune brainstem encephalitis with characteristic antibodies","secondary_identifiers":["Orphanet:624199","UMLS:C5680405","GARD:22500","MEDGEN:1842903"],"termid":"MONDO:0850105","xrefs":{"Monarch":{"xref_id":"0850105"}}}


id: PBO:0088042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); involved in postreplication repair as a heterodimer with Rad18p, regulation of K63 polyubiquitination in response to oxidative stress, DSBR and checkpoint control as a heterodimer with Bre1p, ubiquitin-mediated N-end rule protein degradation as a heterodimer with Ubr1p, ERAD with Ubr1p in the absence of canonical ER membrane ligases, and Rpn4p turnover as part of proteasome homeostasis, in complex with Ubr2p and Mub1p","termid":"PBO:0088042"}


id: MONDO:0008195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paramyotonia congenita of Von Eulenburg is characterized by exercise- or cold-induced myotonia and muscle weakness. Prevalence is unknown. The syndrome is nonprogressive and is transmitted as an autosomal dominant trait. It is caused by mutations in the gene encoding the alpha subunit of the type IV voltage-gated sodium channel (SCN4A; 17q23.3).","definition_xrefs":["Orphanet:684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paramyotonia congenita of Von Eulenburg","secondary_identifiers":["OMIM:168300","UMLS:C0221055","GARD:7325","NANDO:1200501","NCIT:C122790","SCTID:41574007","DOID:0111538","icd11.foundation:1740060527","ICD9:359.29","MEDGEN:113142"],"synonyms":[{"name":"Eulenburg disease","type":"related"},{"name":"PMC","type":"related"},{"name":"Von Eulenburg paramyotonia congenita","type":"related"},{"name":"myotonia congenita intermittens","type":"related"},{"name":"paralysis periodica Paramyotonica","type":"related"},{"name":"paramyotonia congenita","type":"exact"},{"name":"paramyotonia congenita of VON Eulenburg","type":"related"},{"name":"paramyotonia congenita of Von Eulenburg","type":"exact"},{"name":"paramyotonia congenita without cold paralysis","type":"related"}],"termid":"MONDO:0008195","xrefs":{"Monarch":{"xref_id":"0008195"}}}


id: PBO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2530","termid":"PBO:0055111"}


id: PBO:0061492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of interferon response","termid":"PBO:0061492"}


id: GO:0061191
data:
  {"annotated_genes":["SJAG_02433","SJAG_03137"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99549,112259],"is_not":false,"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole fusion, non-autophagic","termid":"GO:0032889"},{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"positively_regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061191","terms_by_termid":{"GO:0061191":null}}


id: PBO:0039767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 2","termid":"PBO:0039767"}


id: PBO:0002965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set2","termid":"PBO:0002965"}


id: PBO:0088176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of an ESCRT-III like complex; null mutant has growth defect at 37 C in an apq12 deletion background; non-essential gene","termid":"PBO:0088176"}


id: GO:0097678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the suppressor of cytokine signaling (SOCS) family of proteins. SOCS represent an important mechanism to extinguish cytokine and growth factor receptor signaling. Individual SOCS proteins are typically induced by specific cytokines and growth factors, thereby generating a negative feedback loop. SOCS proteins have important functions in development and homeostasis, and in disease, particularly tumor suppression and anti-inflammatory functions.","definition_xrefs":["PMID:24705897","InterPro:IPR028413","PMID:23885323","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SOCS family protein binding","synonyms":[{"name":"suppressor of cytokine signaling family protein binding","type":"exact"}],"termid":"GO:0097678"}


id: SO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylpseudouridine","secondary_identifiers":["RNAMOD:056"],"synonyms":[{"name":"2'-O-methylpseudouridine","type":"exact"},{"name":"Ym","type":"exact"},{"name":"two prime O methylpseudouridine","type":"exact"}],"termid":"SO:0001348"}


id: PATO:0020002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population based upon genotypic composition that confers the capability for an organism to differentiate female gonads.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genotypic sex","termid":"PATO:0020000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genotypic sex","termid":"PATO:0020002"}


id: PBO:0053140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6B","termid":"PBO:0053140"}


id: PBO:0067110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 152, pseudogene","termid":"PBO:0067110"}


id: PBO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-Tim10/DDP type","termid":"PBO:0000679"}


id: PBO:0054685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2093","termid":"PBO:0054685"}


id: FYPO:0001906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to thiamine starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to thiamine starvation","synonyms":[{"name":"abnormal cellular response to thiamin starvation","type":"exact"},{"name":"abnormal cellular response to thiamine depletion","type":"exact"},{"name":"abnormal cellular response to thiamine deprivation","type":"exact"},{"name":"abnormal cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to vitamin B1 starvation","type":"exact"}],"termid":"FYPO:0001906"}


id: GO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM receptor activity","termid":"GO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgM receptor activity","synonyms":[{"name":"high affinity IgM receptor activity","type":"exact"}],"termid":"GO:0002172"}


id: PBO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-copy suppressor of Chk1","termid":"PBO:0001098"}


id: GO:0045574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"sterigmatocystin metabolic process","termid":"GO:0045460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0098754"],"is_obsolete":false,"name":"sterigmatocystin catabolic process","synonyms":[{"name":"sterigmatocystin breakdown","type":"exact"},{"name":"sterigmatocystin catabolism","type":"exact"},{"name":"sterigmatocystin degradation","type":"exact"}],"termid":"GO:0045574"}


id: GO:0033756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Oplophorus luciferin + O2 = oxidized Oplophorus luciferin + CO2 + hnu.","definition_xrefs":["EC:1.13.12.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"Oplophorus-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:20417","MetaCyc:RXN-3361"],"synonyms":[{"name":"Oplophorus luciferase activity","type":"related"},{"name":"Oplophorus-luciferin:oxygen 2-oxidoreductase (decarboxylating) activity","type":"related"}],"termid":"GO:0033756"}


id: MONDO:0021163
data:
  {"annotated_genes":["SJAG_00440","SJAG_03677","SJAG_01144","SJAG_03787","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88625,88627,88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the kidney. Representative examples of benign renal neoplasms include fibroma, lipoma, oncocytoma, and juxtaglomerular cell tumor. Representative examples of malignant renal neoplasms include renal cell carcinoma, renal pelvis carcinoma, Wilms tumor, rhabdoid tumor, sarcoma, and lymphoma.","definition_xrefs":["NCIT:C3150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_02231":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.5","UMLS:C0022665","ONCOTREE:KIDNEY","MEDGEN:5967","SCTID:126880001","EFO:0003865"],"synonyms":[{"name":"kidney neoplasm","type":"exact"},{"name":"kidney neoplasm (disease)","type":"exact"},{"name":"kidney tumor","type":"exact"},{"name":"kidney tumour","type":"exact"},{"name":"neoplasm of kidney","type":"exact"},{"name":"neoplasm of the kidney","type":"exact"},{"name":"renal neoplasm","type":"exact"},{"name":"renal tumor","type":"exact"},{"name":"renal tumors","type":"exact"},{"name":"renal tumour","type":"exact"},{"name":"renal tumours","type":"exact"},{"name":"tumor of kidney","type":"exact"},{"name":"tumor of the kidney","type":"exact"},{"name":"tumour of kidney","type":"exact"},{"name":"tumour of the kidney","type":"exact"}],"termid":"MONDO:0021163","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021163"}}}


id: MONDO:0014717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Early-onset Lafora body disease is an extremely rare, inherited form of progressive myoclonic epilepsy characterized by progressive myoclonus epilepsy and Lafora bodies, with an early onset (at around 5 years) and a prolonged disease course. Other manifestations include progressive dysarthria, ataxia, cognitive decline, psychosis, dementia, spasticity, dysarthria, myoclonus, and ataxia. The disease course typically extends for several decades.","definition_xrefs":["Orphanet:324290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"early-onset Lafora body disease","secondary_identifiers":["SCTID:733082001","UMLS:C4225258","MEDGEN:907932","OMIM:616640","DOID:0111445","GARD:17482"],"synonyms":[{"name":"EPM10","type":"exact"},{"name":"epilepsy, progressive myoclonic, 10","type":"exact"},{"name":"epilepsy, progressive myoclonic, type 10","type":"exact"}],"termid":"MONDO:0014717","xrefs":{"Monarch":{"xref_id":"0014717"}}}


id: GO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of an endothelial cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation involved in immune response","termid":"GO:0002263"},{"relation_name":"is_a","term_name":"endothelial cell activation","termid":"GO:0042118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell activation involved in immune response","synonyms":[{"name":"endothelial cell activation during immune response","type":"related"}],"termid":"GO:0002264"}


id: GO:1901341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of store-operated calcium channel activity","synonyms":[{"name":"activation of store-operated calcium channel activity","type":"narrow"},{"name":"up regulation of store-operated calcium channel activity","type":"exact"},{"name":"up-regulation of store-operated calcium channel activity","type":"exact"},{"name":"upregulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:1901341"}


id: GO:0097136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of members of the Bcl-2 family of anti- and proapoptotic regulators. Bcl-2 proteins respond to cues from various forms of intracellular stress, such as DNA damage or cytokine deprivation, and interact with opposing family members to determine whether or not the caspase proteolytic cascade should be unleashed.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Bcl-2 family protein complex","termid":"GO:0097136"}


id: GO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted monoamine transport vesicle.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted monoamine transport vesicle","termid":"GO:0070081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle lumen","type":"exact"}],"termid":"GO:0070082"}


id: MONDO:0006048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic neuroendocrine tumor (obsolete MONDO:0006048)","termid":"MONDO:0006048","xrefs":{"Monarch":{"xref_id":"0006048"}}}


id: GO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the amine 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine, a serotonin receptor agonist that can act as a psychedelic drug.","definition_xrefs":["PMID:19057895","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding","synonyms":[{"name":"(+/-)2-(4-iodo-2,5-dimethoxy-phenyl)-1-methyl-ethylamine binding","type":"exact"},{"name":"1-(4-iodo-2,5-dimethoxyphenyl)-2-aminopropane binding","type":"exact"},{"name":"4-iodo-2,5-dimethoxyphenylisopropylamine binding","type":"exact"}],"termid":"GO:0071886"}


id: MONDO:0017571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proteus-like syndrome describes patients who do not meet the diagnostic criteria for Proteus syndrome but who share a multitude of characteristic clinical features of the disease.","definition_xrefs":["Orphanet:2969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteus-like syndrome","secondary_identifiers":["NCIT:C179930","GARD:12801","MEDGEN:356222","SCTID:716862002","UMLS:C1866398"],"synonyms":[{"name":"Cohen-Hayden syndrome","type":"exact"},{"name":"Proteus like syndrome intellectual disability eye defect","type":"related"},{"name":"Proteus like syndrome mental retardation eye defect","type":"related"}],"termid":"MONDO:0017571","xrefs":{"Monarch":{"xref_id":"0017571"}}}


id: MONDO:0013304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 von Willebrand disease (type 2 VWD) is a form of VWD characterized by a bleeding disorder associated with a qualitative deficiency and functional anomalies of the Willebrand factor (von Willebrand factor; VWF).","definition_xrefs":["Orphanet:166081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease 2","secondary_identifiers":["MEDGEN:224736","UMLS:C1264040","GARD:17020","DOID:0060574","MESH:D056728","OMIM:613554","SCTID:128107007"],"synonyms":[{"name":"VON WILLEBRAND disease, type 2","type":"related"},{"name":"VWD type 2","type":"exact"},{"name":"VWD, type 2","type":"related"},{"name":"VWD2","type":"exact"},{"name":"Von Willebrand disease, type 2","type":"related"},{"name":"Von Willebrand disease, type 2A","type":"related"},{"name":"Von Willebrand disease, type 2B","type":"related"},{"name":"Von Willebrand disease, type 2M","type":"related"},{"name":"Von Willebrand disease, type 2N","type":"related"},{"name":"von Willebrand disease 2","type":"exact"},{"name":"von Willebrand disease type 2","type":"exact"},{"name":"von Willebrand disease type II","type":"exact"},{"name":"von Willebrand disease, types 2A, 2B, 2M, and 2N","type":"exact"},{"name":"von Willebrand's disease type 2","type":"exact"},{"name":"von willebrand's disease 2","type":"exact"}],"termid":"MONDO:0013304","xrefs":{"Monarch":{"xref_id":"0013304"}}}


id: MONDO:0006526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A urticaria with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"allergic urticaria","secondary_identifiers":["ICD9:708.0","ICD10CM:L50.0","MEDGEN:508394","EFO:1000669","DOID:10612","Wikipedia:Urticaria#Allergic_urticaria","SCTID:40178009","UMLS:C0149526"],"synonyms":[{"name":"allergic form of urticaria","type":"exact"},{"name":"allergic form of urticaria (disease)","type":"exact"},{"name":"allergic urticaria (disease)","type":"exact"}],"termid":"MONDO:0006526","xrefs":{"Monarch":{"xref_id":"0006526"}}}


id: PBO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc15","termid":"PBO:0018046"}


id: GO:0004860
data:
  {"annotated_genes":["SJAG_03974","SJAG_01821","SJAG_01245","SJAG_01210","SJAG_01118","SJAG_03931"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77691,108987],"is_not":false,"summary":null,"term":"GO:0004860"},{"annotations":[72734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[110884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[110391,120077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase inhibitor activity","termid":"GO:0019210"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01118":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01821":null,"SJAG_03931":null,"SJAG_03974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"protein kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004860","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0030291":null}}


id: GO:1904516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myofibroblast cell.","definition_xrefs":["PMID:23026405","GO_REF:0000085","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast cell apoptotic process","synonyms":[{"name":"MFB apoptosis","type":"narrow"},{"name":"MFB apoptotic process","type":"exact"},{"name":"myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904516"}


id: MONDO:0006447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A testicular germ cell tumor characterized by the absence of a seminomatous component. It includes embryonal carcinoma, yolk sac tumor, choriocarcinoma, teratoma, and mixed forms.","definition_xrefs":["NCIT:C9313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular non-seminomatous germ cell tumor","secondary_identifiers":["DOID:4086","GARD:17561","ICDO:9065/3","MEDGEN:890627","Orphanet:363494","UMLS:C2057625","EFO:1000570"],"synonyms":[{"name":"non-dysgerminomatous germ cell tumor of testis","type":"exact"},{"name":"non-dysgerminomatous germ cell tumour of testis","type":"exact"},{"name":"non-seminomatous germ cell tumor of testis","type":"exact"},{"name":"non-seminomatous germ cell tumour of testis","type":"exact"},{"name":"testicular germ cell tumor non-seminomatous","type":"exact"},{"name":"testicular germ cell tumour non-seminomatous","type":"exact"},{"name":"testicular non seminomatous germ cell tumor","type":"exact"},{"name":"testicular non seminomatous germ cell tumour","type":"exact"},{"name":"testicular non-dysgerminomatous germ cell tumor","type":"exact"},{"name":"testicular non-dysgerminomatous germ cell tumour","type":"exact"},{"name":"testicular non-seminomatous germ cell tumor","type":"exact"}],"termid":"MONDO:0006447","xrefs":{"Monarch":{"xref_id":"0006447"}}}


id: PBO:0047985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member B","termid":"PBO:0047985"}


id: MONDO:0018722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary lymphedema with associated anomalies (obsolete MONDO:0018722)","secondary_identifiers":["Orphanet:458841"],"termid":"MONDO:0018722","xrefs":{"Monarch":{"xref_id":"0018722"}}}


id: MONDO:1010153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Darier disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Darier disease, non-human animal","secondary_identifiers":["OMIA:002265"],"termid":"MONDO:1010153","xrefs":{"Monarch":{"xref_id":"1010153"}}}


id: PBO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOG neighbor homeobox","termid":"PBO:0060475"}


id: GO:0008435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to retard or prevent coagulation. Often used in the context of blood or milk coagulation.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete anticoagulant activity (obsolete GO:0008435)","synonyms":[{"name":"anticoagulant activity","type":"exact"}],"termid":"GO:0008435"}


id: MONDO:0015882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of pancreatic neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of pancreas (obsolete MONDO:0015882)","secondary_identifiers":["MedDRA:10061902","Orphanet:180824"],"synonyms":[{"name":"rare pancreas neoplasm","type":"exact"},{"name":"rare pancreas tumor","type":"exact"},{"name":"rare pancreatic neoplasm","type":"exact"},{"name":"rare pancreatic tumor","type":"exact"}],"termid":"MONDO:0015882","xrefs":{"Monarch":{"xref_id":"0015882"}}}


id: PBO:0029425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation","termid":"PBO:0029425"}


id: PBO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U4","termid":"PBO:0003202"}


id: MONDO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive type of endocrine tumor of the appendix presenting equally in males and females in the fifth decade of life and manifesting with a palpable mass and abdominal pain or acute appendicitis. Metastasis to the ovaries, peritoneum or right colon has usually already occurred in half of patients at the time of diagnosis.","definition_xrefs":["Orphanet:329984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"appendix carcinoma","termid":"MONDO:0003196"},{"relation_name":"is_a","term_name":"neuroendocrine tumor of the appendix, well differentiated, low or intermediate grade","termid":"MONDO:0015066"},{"relation_name":"is_a","term_name":"combined carcinoid and adenocarcinoma","termid":"MONDO:0021659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"goblet cell carcinoma","secondary_identifiers":["UMLS:C0205695","MEDGEN:60007","NCIT:C3689","NORD:1931","ONCOTREE:GCCAP","GARD:10414","ICDO:8243/3"],"synonyms":[{"name":"GCC","type":"exact"},{"name":"Goblet Cell Adenocarcinoma","type":"exact"},{"name":"appendix adenocarcinoid tumor","type":"exact"},{"name":"appendix adenocarcinoid tumour","type":"exact"},{"name":"appendix goblet cell carcinoid","type":"exact"},{"name":"appendix goblet cell carcinoid tumor","type":"exact"},{"name":"appendix goblet cell carcinoid tumour","type":"exact"},{"name":"appendix mixed carcinoid-adenocarcinoma","type":"exact"},{"name":"carcinoma of goblet cell","type":"exact"},{"name":"goblet cell adenocarcinoid","type":"exact"},{"name":"goblet cell carcinoid","type":"exact"},{"name":"goblet cell carcinoid of appendix","type":"exact"},{"name":"goblet cell carcinoid of the appendix","type":"exact"},{"name":"goblet cell carcinoid tumor","type":"exact"},{"name":"goblet cell carcinoid tumour","type":"exact"},{"name":"goblet cell carcinoma","type":"exact"},{"name":"goblet cell tumor","type":"exact"},{"name":"goblet cell tumour","type":"exact"},{"name":"mucinous carcinoid","type":"related"},{"name":"mucinous carcinoid tumor","type":"exact"},{"name":"mucinous carcinoid tumour","type":"exact"}],"termid":"MONDO:0018017","xrefs":{"Monarch":{"xref_id":"0018017"}}}


id: GO:0061885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20395454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"},{"relation_name":"is_a","term_name":"positive regulation of excitatory postsynaptic potential","termid":"GO:2000463"},{"relation_name":"positively_regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mini excitatory postsynaptic potential","termid":"GO:0061885"}


id: GO:0045117
data:
  {"annotated_genes":["SJAG_04673","SJAG_03256","SJAG_02962","SJAG_03652","SJAG_00835","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[105586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[102616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[92025,92024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of azoles, heterocyclic compounds found in many biologically important substances, across a lipid bilayer, across a membrane.","definition_xrefs":["Wikipedia:Azole","GOC:go_curators","ISBN:3527307206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"azole transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"azole transport","type":"related"}],"termid":"GO:0045117","terms_by_termid":{"GO:0071934":null,"GO:0089708":null,"GO:0090513":null,"GO:0140125":null,"GO:1990545":null}}


id: GO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + ATP + Photinus luciferin = light + diphosphate + AMP + CO2 + oxidized Photinus luciferin.","definition_xrefs":["MetaCyc:1.13.12.7-RXN","EC:1.13.12.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity","secondary_identifiers":["RHEA:10732"],"synonyms":[{"name":"Photinus luciferin 4-monooxygenase (adenosine triphosphate-hydrolyzing)","type":"related"},{"name":"Photinus pyralis luciferase activity","type":"related"},{"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolysing)","type":"related"},{"name":"Photinus-luciferin:oxygen 4-oxidoreductase (decarboxylating, ATP-hydrolysing)","type":"related"},{"name":"firefly luciferase activity","type":"related"},{"name":"firefly luciferin luciferase activity","type":"related"},{"name":"luciferase (firefly luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047077"}


id: PBO:0062593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 3","termid":"PBO:0062593"}


id: PBO:0082861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm B; part of heteroheptameric complex (with Smd1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm B and Sm B'","termid":"PBO:0082861"}


id: PBO:0090957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Taf2","termid":"PBO:0090957"}


id: MONDO:0009997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Roberts syndrome (obsolete MONDO:0009997)","termid":"MONDO:0009997","xrefs":{"Monarch":{"xref_id":"0009997"}}}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: PR:P78831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.14","synonyms":[{"name":"Spom972h-ght5","type":"exact"},{"name":"hexose transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78831"}


id: GO:1900546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900546)","synonyms":[{"name":"activation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900546"}


id: GO:1900331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from trimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from trimethylamine","termid":"GO:1900330"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from trimethylamine","synonyms":[{"name":"down regulation of methane biosynthetic process from trimethylamine","type":"exact"},{"name":"down-regulation of methane biosynthetic process from trimethylamine","type":"exact"},{"name":"downregulation of methane biosynthetic process from trimethylamine","type":"exact"},{"name":"inhibition of methane biosynthetic process from trimethylamine","type":"narrow"}],"termid":"GO:1900331"}


id: MONDO:0017214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of vitamin B12 (cobalamin) metabolism characterized by recurrent ketoacidotic comas or transient vomiting, dehydration, hypotonia and intellectual deficit, which responds to vitamin B12. There are three types: cblA, cblB and cblD-variant 2 (cblDv2).","definition_xrefs":["Orphanet:28"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"vitamin B12-responsive methylmalonic acidemia","secondary_identifiers":["UMLS:C0342720","MEDGEN:575193","GARD:12623","SCTID:69614003"],"synonyms":[{"name":"adenosylcobalamin deficiency","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria","type":"exact"}],"termid":"MONDO:0017214","xrefs":{"Monarch":{"xref_id":"0017214"}}}


id: MONDO:0019147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The infection of a fly larva (maggot) in human tissue, which most commonly occurs in tropical climates. Affected tissues most commonly include skin, especially if open wounds are present, nasal passages, ears, and eyes.","definition_xrefs":["NCIT:C128400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"myiasis","secondary_identifiers":["UMLS:C0027030","DOID:11080","SCTID:60412004","EFO:0007389","GARD:18924","ICD9:134.0","MEDGEN:10148","Orphanet:75110","icd11.foundation:1367149207","MedDRA:10028586","MESH:D009198"],"synonyms":[{"name":"infestation by fly larvae","type":"exact"},{"name":"infestation by maggots","type":"exact"},{"name":"maggot infestation","type":"exact"},{"name":"myiasis, unspecified","type":"exact"}],"termid":"MONDO:0019147","xrefs":{"Monarch":{"xref_id":"0019147"}}}


id: GO:0050470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trimethylamine + H2O + electron-transferring flavoprotein = dimethylamine + formaldehyde + reduced electron-transferring flavoprotein.","definition_xrefs":["EC:1.5.8.2","MetaCyc:1.5.8.2-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trimethylamine dehydrogenase activity","secondary_identifiers":["UM-BBD_enzymeID:r1378","RHEA:11864"],"synonyms":[{"name":"TMADh activity","type":"related"},{"name":"trimethylamine:electron-transferring flavoprotein oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0050470"}


id: GO:0005645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN-binding protein (obsolete GO:0005645)","synonyms":[{"name":"RAN-binding protein","type":"exact"}],"termid":"GO:0005645"}


id: GO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a seed. Seed dormancy is a suspension of most physiological activity and growth in a seed, including the embryo contained therein, that can be reactivated. It often requires special conditions for reactivation, such as specific temperature, scarification, or leaching of inhibitors.","definition_xrefs":["GOC:lr","GOC:PO_curators","PO_REF:00009","ISBN:9781405139830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dormancy process","secondary_identifiers":["Wikipedia:Seed#Seed_dormancy_and_protection"],"synonyms":[{"name":"seed dormancy","type":"related"}],"termid":"GO:0010162"}


id: PBO:0046439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A interacting protein 1","termid":"PBO:0046439"}


id: GO:0015868
data:
  {"annotated_genes":["SJAG_03334","SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[103305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[59112,104804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The directed movement of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"purine ribonucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015868","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null}}


id: MONDO:0850089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Gitelman-like kidney tubulopathy due to mitochondrial DNA mutation","secondary_identifiers":["UMLS:C5680390","GARD:22486","MEDGEN:1843117","Orphanet:620371"],"termid":"MONDO:0850089","xrefs":{"Monarch":{"xref_id":"0850089"}}}


id: PBO:0091133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox20","termid":"PBO:0091133"}


id: GO:0021782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell development","termid":"GO:0021782"}


id: PBO:0005864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 4","termid":"PBO:0005864"}


id: GO:0015083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of aluminum (Al) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"aluminum ion transmembrane transporter activity","secondary_identifiers":["GO:0015084"],"synonyms":[{"name":"aluminium ion transporter activity","type":"exact"},{"name":"aluminium resistance permease activity","type":"exact"},{"name":"aluminum resistance permease activity","type":"exact"}],"termid":"GO:0015083"}


id: PBO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase Trm12 (predicted)","termid":"PBO:0000581"}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: GO:0017177
data:
  {"annotated_genes":["SJAG_03535","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78526,80206],"is_not":false,"summary":null,"term":"GO:0017177"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins.","definition_xrefs":["PMID:10464333","PMID:8910335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"glucosidase II complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"alpha-glucosidase II complex","type":"related"}],"termid":"GO:0017177","terms_by_termid":{"GO:0017177":null}}


id: PBO:0051737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 like","termid":"PBO:0051737"}


id: GO:0098780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) in response to the depolarization of one or more mitochondria.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitochondrial depolarisation","secondary_identifiers":["Reactome:R-HSA-9840373"],"termid":"GO:0098780"}


id: PBO:0062559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 6 (gene/pseudogene)","termid":"PBO:0062559"}


id: PBO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer","termid":"PBO:0025453"}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: GO:1901379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of potassium ion transmembrane transport","synonyms":[{"name":"regulation of potassium ion membrane transport","type":"exact"}],"termid":"GO:1901379"}


id: PBO:0064721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 57","termid":"PBO:0064721"}


id: PBO:0076717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 24","termid":"PBO:0076717"}


id: GO:0035985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.","definition_xrefs":["PMID:21248468","PMID:15621527","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"senescence-associated heterochromatin focus","synonyms":[{"name":"SAHF","type":"exact"},{"name":"senescence-associated heterochromatin foci","type":"exact"}],"termid":"GO:0035985"}


id: GO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative transcription elongation factor activity (obsolete GO:0008148)","synonyms":[{"name":"negative transcription elongation factor activity","type":"exact"}],"termid":"GO:0008148"}


id: PBO:0086287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in chromosomal DNA replication; interacts with Sld3p and reduces its affinity for Cdc45p; deletion mutant has aberrant mitochondria; ortholog of human MTBP, which is a DNA replication origin firing factor","termid":"PBO:0086287"}


id: PBO:0027652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_choline","termid":"PBO:0027652"}


id: PATO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's being compact or dense in arrangement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight","termid":"PATO:0001809"}


id: GO:1902463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cell leading edge.","definition_xrefs":["PMID:21543326","GOC:TermGenie","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell leading edge","synonyms":[{"name":"protein localisation in cell leading edge","type":"exact"},{"name":"protein localisation to cell leading edge","type":"exact"},{"name":"protein localization in cell leading edge","type":"exact"}],"termid":"GO:1902463"}


id: MONDO:0019588
data:
  {"annotated_genes":["SJAG_00082","SJAG_01941","SJAG_02155","SJAG_04856","SJAG_00244","SJAG_01400","SJAG_02463","SJAG_03536","SJAG_00164","SJAG_03007","SJAG_00488","SJAG_04558","SJAG_01538","SJAG_04409","SJAG_00365","SJAG_04554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011067"},{"annotations":[88462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012091"},{"annotations":[87156,87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010933"},{"annotations":[88605,88606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013471"},{"annotations":[88888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013386"},{"annotations":[87643,87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014237"},{"annotations":[88572,88571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013489"},{"annotations":[88979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032740"},{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033199"},{"annotations":[88094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032639"},{"annotations":[89009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032761"},{"annotations":[89012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032762"},{"annotations":[88984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958277"},{"annotations":[88989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032749"}]},"cv_name":"mondo","definition":"Autosomal recessive form of nonsyndromic deafness.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00164":null,"SJAG_00244":null,"SJAG_00365":null,"SJAG_00488":null,"SJAG_01400":null,"SJAG_01538":null,"SJAG_01941":null,"SJAG_02155":null,"SJAG_02463":null,"SJAG_03007":null,"SJAG_03536":null,"SJAG_04409":null,"SJAG_04554":null,"SJAG_04558":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:220290","MEDGEN:337623","GARD:18117","UMLS:C1846647","DOID:0050565","Orphanet:90636","MESH:C564609","OMIM:607197"],"synonyms":[{"name":"autosomal recessive isolated neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive isolated sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive nonsyndromic genetic deafness","type":"narrow"},{"name":"deafness, autosomal recessive","type":"narrow"},{"name":"deafness, neurosensory nonsyndromic recessive, DFN","type":"narrow"},{"name":"hearing loss, autosomal recessive","type":"exact"},{"name":"nonsyndromic deafness, autosomal recessive","type":"narrow"},{"name":"nonsyndromic genetic deafness, autosomal recessive","type":"narrow"}],"termid":"MONDO:0019588","terms_by_termid":{"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0012091":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0033199":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0019588"}}}


id: PBO:0029202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_micafungin","termid":"PBO:0029202"}


id: FYECO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nigericin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nigericin","termid":"FYECO:0000287"}


id: PBO:0067845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 147","termid":"PBO:0067845"}


id: GO:1904888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus.","definition_xrefs":["PMID:11262227","GOC:bf","GOC:TermGenie","GO_REF:0000094","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial skeletal system development","synonyms":[{"name":"cranial skeleton development","type":"narrow"},{"name":"craniofacial development","type":"narrow"},{"name":"cranium development","type":"related"},{"name":"osteocranium development","type":"narrow"}],"termid":"GO:1904888"}


id: PBO:0051832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 6","termid":"PBO:0051832"}


id: GO:0047795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cyclohexane-1,2-diol + NAD+ = 2-hydroxycyclohexan-1-one + NADH.","definition_xrefs":["MetaCyc:CYCLOHEXANE-12-DIOL-DEHYDROGENASE-RXN","EC:1.1.1.174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclohexane-1,2-diol dehydrogenase activity","secondary_identifiers":["RHEA:18141"],"synonyms":[{"name":"trans-cyclohexane-1,2-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047795"}


id: PBO:0062610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily T member 1 pseudogene","termid":"PBO:0062610"}


id: PBO:0055921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A9, pseudogene","termid":"PBO:0055921"}


id: MONDO:0021895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common disorder noted with jaw movement. It may be caused by malocclusion, repetitive use injury, trauma or arthritis. It is more prevalent among females between their second and fourth decades. Clinical signs include preauricular pain, temporomandibular joint clicking (as the mandibular condyle slips from the articulation made with the capsular disk and temporal bone) and restriction of jaw motion. Clinical course is typically benign but may progress to associated headaches, ear and neck pain, tinnitus and dislocation of temporomandibular joint. Prognosis is favorable as a majority of cases will respond to conservative management.","definition_xrefs":["NCIT:C35066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"},{"relation_name":"is_a","term_name":"myofascial pain syndrome","termid":"MONDO:0006862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"temporomandibular joint dysfunction syndrome","secondary_identifiers":["UMLS:C0039496","MEDGEN:21093","MESH:D013706"],"synonyms":[{"name":"Costen Syndrome","type":"related"},{"name":"Costen's Syndrome","type":"related"},{"name":"Costen's complex","type":"related"},{"name":"Costen's syndrome","type":"related"},{"name":"Costens Syndrome","type":"related"},{"name":"Joint Syndrome, Temporomandibular","type":"related"},{"name":"Mandibular dysfunction","type":"related"},{"name":"Myofascial Pain Dysfunction Syndrome, Temporomandibular Joint","type":"related"},{"name":"Myofascial pain - dysfunction syndrome of TMJ","type":"related"},{"name":"Snapping jaw","type":"related"},{"name":"Syndrome, Costen's","type":"related"},{"name":"Syndrome, TMJ","type":"related"},{"name":"Syndrome, Temporomandibular Joint","type":"related"},{"name":"TMJ Syndrome","type":"related"},{"name":"TMJ syndrome","type":"related"},{"name":"TMJPDS - Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular Joint Dysfunction Syndrome","type":"related"},{"name":"Temporomandibular Joint Syndrome","type":"related"},{"name":"Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular joint syndrome","type":"related"},{"name":"Temporomandibular joint-pain-dysfunction syndrome","type":"related"},{"name":"temporomandibular joint dysfunction syndrome","type":"exact"}],"termid":"MONDO:0021895","xrefs":{"Monarch":{"xref_id":"0021895"}}}


id: PBO:0088117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase S; expression is induced under low-nitrogen conditions","termid":"PBO:0088117"}


id: FYPO:0007403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anaphase-promoting complex (APC) is present for longer than normal. The APC normally forms in prometaphase and disassembles before anaphase; in mutants it may remain present during anaphase.","definition_xrefs":["PMID:24583014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of anaphase-promoting complex presence","synonyms":[{"name":"APC present during mitotic anaphase","type":"narrow"},{"name":"increased duration of APC presence","type":"exact"},{"name":"increased duration of anaphase-promoting complex presence during mitotic cell cycle","type":"related"},{"name":"increased duration of anaphase-promoting complex presence during vegetative growth","type":"exact"},{"name":"increased persistence of anaphase-promoting complex","type":"related"}],"termid":"FYPO:0007403"}


id: PBO:0084124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heterotrimeric nascent polypeptide-associated complex beta3 subunit; complex binds ribosomes via its beta-subunits in close proximity to nascent polypeptides; interacts with Caf130p of the CCR4-NOT complex; similar to human BTF3; BTT1 has a paralog, EGD1, that arose from the whole genome duplication","termid":"PBO:0084124"}


id: PBO:0088250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication termination factor Rtf1","termid":"PBO:0088250"}


id: GO:0038111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-7 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-7","termid":"GO:0098761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-7-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-1266695"],"synonyms":[{"name":"IL-7-mediated signaling pathway","type":"exact"},{"name":"interleukin-7-mediated signalling pathway","type":"exact"}],"termid":"GO:0038111"}


id: PBO:0117017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF16 antisense RNA 1","termid":"PBO:0117017"}


id: PBO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2","termid":"PBO:0042964"}


id: PBO:0062591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 1","termid":"PBO:0062591"}


id: PBO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_mislocalized_to_nucleus_and_spindle_pole_body","termid":"PBO:0034641"}


id: GO:0061143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a primary alveolar septum over time, from its formation to the mature structure. A primary alveolar septum is a specialized epithelium that surrounds the saccule as it forms.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar primary septum development","termid":"GO:0061143"}


id: PBO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal tubular acidosis","termid":"PBO:0002089"}


id: GO:0098918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of synapse","termid":"GO:0098918"}


id: PBO:0040291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting family member beta 4","termid":"PBO:0040291"}


id: PBO:0073238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 2","termid":"PBO:0073238"}


id: MONDO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute disseminated encephalomyelitis (obsolete MONDO:0005633)","termid":"MONDO:0005633","xrefs":{"Monarch":{"xref_id":"0005633"}}}


id: PR:O14213
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug185 gene.","definition_xrefs":["UniProtKB:O14213","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 185 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.08","synonyms":[{"name":"Spom972h-mug185","type":"exact"}],"termid":"PR:O14213"}


id: PBO:0065706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 7","termid":"PBO:0065706"}


id: GO:0098878
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is capable of functioning as a neurotransmitter receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"neurotransmitter receptor complex","termid":"GO:0098878"}


id: MONDO:1010087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-TIF1 autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"anti-TIF1 dermatomyositis","synonyms":[{"name":"anti-transcription intermediary factor 1 complex dermatomyositis","type":"exact"}],"termid":"MONDO:1010087","xrefs":{"Monarch":{"xref_id":"1010087"}}}


id: PBO:0087986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; catalyzes the conversion of uridine to pseudouridine at position 31 in cytoplasmic and mitochondrial tRNAs; mutation of Asp168 to Ala abolishes enzyme activity; not essential for viability","termid":"PBO:0087986"}


id: MONDO:0008716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital skin condition characterized by premature aging, more especially in the form of unusually fragile, thin skin on the hands and feet. Its onset is in early childhood; it progresses over the next few years and then remains stable. A bruising tendency has been observed.","definition_xrefs":["Wikipedia:Acrogeria"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"acrogeria","secondary_identifiers":["MESH:C538187","Orphanet:2500","UMLS:C0406584","NORD:1202","GARD:6543","icd11.foundation:1607996977","MEDGEN:96063","OMIM:201200","SCTID:238872007","ICD9:259.8"],"synonyms":[{"name":"Gottron Syndrome","type":"exact"},{"name":"Gottron syndrome","type":"exact"},{"name":"Metageria","type":"related"},{"name":"acrogeria, Gottron type","type":"exact"},{"name":"acrometageria","type":"exact"},{"name":"familial acrogeria","type":"related"}],"termid":"MONDO:0008716","xrefs":{"Monarch":{"xref_id":"0008716"}}}


id: GO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + ribofuranose = D-ribonate + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.115","RHEA:11676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ribose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RIBOSE-1-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01079"],"synonyms":[{"name":"D-ribose dehydrogenase (NADP+)","type":"related"},{"name":"D-ribose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-pentose-dehydrogenase activity","type":"related"}],"termid":"GO:0050259"}


id: GO:1990010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a compound eye retinal cell.","definition_xrefs":["PMID:12021768","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}


id: SO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The major class of splice site with dinucleotides GT and AG for donor and acceptor sites, respectively.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000675 canonical_splice_site (obsolete SO:0000675)","synonyms":[{"name":"canonical splice site","type":"exact"}],"termid":"SO:0000675"}


id: PBO:0038362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_necessary_component_activity","termid":"PBO:0038362"}


id: PBO:0041114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone marrow stromal cell antigen 1","termid":"PBO:0041114"}


id: MONDO:0014873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental skin condition consisting of abnormal pilosebaceous follicle development. It is characterized by linear or band-like distributions of groups of comedones, usually on the face, neck, upper arm, chest, and abdomen, that appear at birth or in childhood.","definition_xrefs":["NCIT:C3946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nevus comedonicus syndrome","secondary_identifiers":["MEDGEN:75592","OMIM:617025","GARD:13073","Orphanet:64754","UMLS:C0265987","SCTID:35962006"],"synonyms":[{"name":"NC","type":"related"},{"name":"NEVUS comedonicus","type":"related"},{"name":"Nevus comedonicus","type":"exact"},{"name":"acne Nevus","type":"exact"},{"name":"acneiform Nevus","type":"exact"},{"name":"comedo Nevus","type":"exact"},{"name":"nevus comedonicus, somatic","type":"exact"},{"name":"pilosebaceous nevoid disorder","type":"exact"}],"termid":"MONDO:0014873","xrefs":{"Monarch":{"xref_id":"0014873"}}}


id: MONDO:0018602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing soft tissue infection","secondary_identifiers":["UMLS:C2732890","GARD:21839","ICD10CM:M72.6","ICD9:136.9","ICD9:729.99","MEDGEN:752585","Orphanet:440368","SCTID:443928008"],"synonyms":[{"name":"NSTI","type":"exact"}],"termid":"MONDO:0018602","xrefs":{"Monarch":{"xref_id":"0018602"}}}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: PBO:0059731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 5","termid":"PBO:0059731"}


id: PBO:0063218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 8","termid":"PBO:0063218"}


id: MONDO:0976236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegenerative disorder, X-linked, female-restricted, with parkinsonism and cognitive impairment","secondary_identifiers":["OMIM:301142"],"termid":"MONDO:0976236","xrefs":{"Monarch":{"xref_id":"0976236"}}}


id: PBO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 6","termid":"PBO:0070702"}


id: SO:1001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-canonical start codon of sequence CTG.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_canonical_start_codon","termid":"SO:0000680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTG_start_codon","synonyms":[{"name":"CTG start codon","type":"exact"}],"termid":"SO:1001273"}


id: MONDO:1011686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contact activation defect, non-human animal","secondary_identifiers":["OMIA:000225"],"termid":"MONDO:1011686","xrefs":{"Monarch":{"xref_id":"1011686"}}}


id: PBO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 6","termid":"PBO:0045193"}


id: PBO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5 (predicted)","termid":"PBO:0004813"}


id: MONDO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 12q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 12. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 12q duplication include developmental delay, intellectual disability, behavioral problems, growth delay, and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 12","termid":"MONDO:0042968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 12","secondary_identifiers":["GARD:1926","MEDGEN:208641","UMLS:C0795846","MESH:C538300"],"synonyms":[{"name":"12q duplication","type":"related"},{"name":"12q trisomy","type":"related"},{"name":"Duplication 12q","type":"related"},{"name":"chromosome 12q duplication","type":"related"},{"name":"partial trisomy 12q","type":"related"},{"name":"trisomy 12q","type":"related"}],"termid":"MONDO:0042969","xrefs":{"Monarch":{"xref_id":"0042969"}}}


id: PBO:0077217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog","termid":"PBO:0077217"}


id: MONDO:0004074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of cystic structures lined by mucinous columnar epithelial cells in a fibrotic stroma.","definition_xrefs":["NCIT:C40041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous cystadenofibroma","termid":"MONDO:0003886"},{"relation_name":"is_a","term_name":"ovarian mucinous adenofibroma","termid":"MONDO:0003887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian mucinous cystadenofibroma","secondary_identifiers":["UMLS:C1518725","DOID:7013","MEDGEN:276670"],"synonyms":[{"name":"ovarian mucinous cystadenofibroma","type":"exact"}],"termid":"MONDO:0004074","xrefs":{"Monarch":{"xref_id":"0004074"}}}


id: GO:0035572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dimethylation of the N-terminal serine of proteins to form the derivative N,N-dimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine dimethylation","termid":"GO:0035572"}


id: GO:0006826
data:
  {"annotated_genes":["SJAG_02834","SJAG_04675","SJAG_01007","SJAG_02968","SJAG_04737","SJAG_04867","SJAG_04743","SJAG_02473","SJAG_04677","SJAG_04260","SJAG_02457","SJAG_03667","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[72023,100003,115805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[115222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[79715,77529,62180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[91153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[79499,94341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[71068,62894,62566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03667":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"iron ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015684","GO:0015681","GO:0033216","GO:0097286","GO:0015682"],"synonyms":[{"name":"ferric ion import","type":"narrow"},{"name":"ferric ion transport","type":"narrow"},{"name":"ferric iron import","type":"narrow"},{"name":"ferric iron transport","type":"narrow"},{"name":"ferric iron uptake","type":"narrow"},{"name":"ferrous ion transport","type":"narrow"},{"name":"ferrous iron transport","type":"narrow"},{"name":"iron ion import","type":"related"},{"name":"iron transport","type":"exact"}],"termid":"GO:0006826","terms_by_termid":{"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0048250":null,"GO:0098711":null,"GO:0140466":null}}


id: GO:0009538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.","definition_xrefs":["GOC:kd","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem I reaction center","synonyms":[{"name":"photosystem I reaction centre","type":"exact"}],"termid":"GO:0009538"}


id: PATO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's capacity to do work.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Energy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"energy","termid":"PATO:0001021"}


id: PBO:0016048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS protein complex associated ATPase (predicted)","termid":"PBO:0016048"}


id: GO:0034419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-2-hydroxyglutarate + O2 = 2-oxoglutarate + hydrogen peroxide.","definition_xrefs":["PMID:18390652"],"gene_count":0,"genotype_count":0,"name":"obsolete L-2-hydroxyglutarate oxidase activity (obsolete GO:0034419)","termid":"GO:0034419"}


id: GO:0035577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an azurophil granule, a primary lysosomal granule found in neutrophil granulocytes that contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.","definition_xrefs":["GOC:bf","PMID:17152095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"azurophil granule","termid":"GO:0042582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"azurophil granule membrane","synonyms":[{"name":"primary granule membrane","type":"exact"}],"termid":"GO:0035577"}


id: PBO:0077131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCDD inducible poly(ADP-ribose) polymerase","termid":"PBO:0077131"}


id: PBO:0082926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic 60S subunit biogenesis factor; associates with pre-60S particles; similar to Rei1p and shares partially redundant function in cytoplasmic 60S subunit maturation; contains dispersed C2H2 zinc finger domains","termid":"PBO:0082926"}


id: PBO:0029934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029934"}


id: SO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region enriched in DNA loop anchors and across which DNA loops occur less often than expected by chance.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain_boundary","synonyms":[{"name":"TAD boundary","type":"exact"},{"name":"TAD_boundary","type":"exact"},{"name":"topologically associated domain boundary","type":"exact"}],"termid":"SO:0002305"}


id: PBO:0076296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope protein 1","termid":"PBO:0076296"}


id: MONDO:0007388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital shortness of the costocoracoid ligament is a rare anomaly characterized by fixation of the scapula to the first rib, resulting in a cosmetic deformity with rounding of the shoulders and loss of the anterior clavicular contour.","definition_xrefs":["Orphanet:2391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenitally short costocoracoid ligament","secondary_identifiers":["MESH:C536448","UMLS:C1852523","MEDGEN:342257","OMIM:122580","GARD:1551","SCTID:725101002"],"synonyms":[{"name":"congenital shortness of the costocoracoid ligament","type":"related"},{"name":"costocoracoid ligament congenitally short","type":"related"},{"name":"costocoracoid ligament, congenitally short","type":"related"},{"name":"fixation of the scapula to the first rib by a congenitally short costocoracoid ligament","type":"related"}],"termid":"MONDO:0007388","xrefs":{"Monarch":{"xref_id":"0007388"}}}


id: MONDO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rectal adenocarcinoma (obsolete MONDO:0005540)","termid":"MONDO:0005540","xrefs":{"Monarch":{"xref_id":"0005540"}}}


id: PBO:0030525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_premeiotic_DNA_replication","termid":"PBO:0030525"}


id: MONDO:0019660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer syndrome type 2 (PS2) is a frequent and severe type of Pfeiffer syndrome (PS), characterized by cloverleaf skull, severe associated functional disorders, and hand/foot and elbow/knee abnormalities.","definition_xrefs":["Orphanet:93259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pfeiffer syndrome","termid":"MONDO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pfeiffer syndrome type 2","secondary_identifiers":["MEDGEN:1761826","UMLS:C5438849","icd11.foundation:531949642","GARD:16808"],"termid":"MONDO:0019660","xrefs":{"Monarch":{"xref_id":"0019660"}}}


id: PBO:0091578
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bioneer strain is only N-terminal deleted","termid":"PBO:0091578"}


id: PBO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-24","termid":"PBO:0051330"}


id: MONDO:0009833
data:
  {"annotated_genes":["SJAG_00487","SJAG_04491","SJAG_04991","SJAG_03684","SJAG_02171"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88085,88088,88087,88086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044204"},{"annotations":[87832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044205"}]},"cv_name":"mondo","definition":"Shwachman-Diamond syndrome (SDS) is a rare multisystemic syndrome characterized by chronic and usually mild neutropenia, pancreatic exocrine insufficiency associated with steatorrhea and growth failure, skeletal dysplasia with short stature, and an increased risk of bone marrow aplasia or leukemic transformation.","definition_xrefs":["Orphanet:811"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete metaphyseal dysplasia (obsolete MONDO:0000841)","termid":"MONDO:0000841"},{"relation_name":"excluded_subClassOf","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"},{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","termid":"MONDO:0015945"},{"relation_name":"excluded_subClassOf","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"excluded_subClassOf","term_name":"obsolete multiple metaphyseal dysplasia (obsolete MONDO:0019693)","termid":"MONDO:0019693"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_02171":null,"SJAG_03684":null,"SJAG_04491":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Shwachman-Diamond syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060479","DOID:0080023","MESH:C537330","NANDO:1200356","UMLS:C0272170","icd11.foundation:232885463","MEDGEN:124418","MedDRA:10067940","GARD:4863","NANDO:2200756","NCIT:C61235","NORD:1711","OMIMPS:260400","SCTID:89454001"],"synonyms":[{"name":"SDS","type":"exact"},{"name":"Schwachman-Diamond syndrome","type":"exact"},{"name":"Schwachmann-Diamond syndrome","type":"exact"},{"name":"Shwachman Diamond Syndrome","type":"exact"},{"name":"Shwachman syndrome","type":"exact"},{"name":"Shwachman-Bodian syndrome","type":"related"},{"name":"Shwachman-Bodian-Diamond syndrome","type":"exact"},{"name":"Shwachman-Diamond syndrome","type":"exact"},{"name":"Shwachman-Diamond type metaphyseal dysplasia","type":"related"},{"name":"congenital lipomatosis of pancreas","type":"related"},{"name":"lipomatosis of pancreas, congenital","type":"related"},{"name":"pancreatic insufficiency and bone marrow dysfunction","type":"exact"}],"termid":"MONDO:0009833","terms_by_termid":{"MONDO:0044204":null,"MONDO:0044205":null},"xrefs":{"Monarch":{"xref_id":"0009833"}}}


id: MONDO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the ovary with an invasive epithelial component and a fibrotic stroma. The epithelial component is characterized by the presence of malignant epithelial cells with intracytoplasmic mucin. Cystic spaces are also present which contain mucoid material.","definition_xrefs":["NCIT:C40034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinofibroma","termid":"MONDO:0002991"},{"relation_name":"is_a","term_name":"mucinous ovarian cancer","termid":"MONDO:0024282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mucinous adenocarcinofibroma","secondary_identifiers":["MEDGEN:384497","DOID:6278","ICDO:9015/3","UMLS:C2212014"],"synonyms":[{"name":"ovarian mucinous adenocarcinofibroma","type":"exact"},{"name":"ovarian mucinous malignant adenofibroma","type":"exact"}],"termid":"MONDO:0003839","xrefs":{"Monarch":{"xref_id":"0003839"}}}


id: MOD:00108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-tyrosine amide.","definition_xrefs":["PubMed:3562898","PubMed:1377792","RESID:AA0099","PubMed:6509012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine amide","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanamide","type":"exact"},{"name":"L-tyrosine amide","type":"exact"},{"name":"MOD_RES Tyrosine amide","type":"exact"},{"name":"TyrN","type":"exact"},{"name":"amidated L-tyrosine","type":"exact"},{"name":"tyrosinamide","type":"exact"}],"termid":"MOD:00108"}


id: FYPO:0005227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal level of ubiquitinated protein in cell","synonyms":[{"name":"normal level of ubiquitinated protein during vegetative growth","type":"exact"},{"name":"normal level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"normal level of ubiquitylated protein in cell","type":"related"},{"name":"normal ubiquitinated protein accumulation","type":"related"},{"name":"normal ubiquitinated protein level","type":"exact"}],"termid":"FYPO:0005227"}


id: PBO:0078254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 29-1","termid":"PBO:0078254"}


id: PBO:0116285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of the nuclear pore complex central core; direct role in nucleocytoplasmic transport and maintenance of the NPC permeability barrier; role in gene tethering at the nuclear periphery; short linear motifs connect Mlp1p and the Y-complex via Nup85p to facilitate nuclear basket docking onto the core of the NPC; Cdc5p-mediated phosphorylation leads to detachment and reattachment of the basket during meiosis; both NUP1 and NUP60 are human NUP153 homologs","termid":"PBO:0116285"}


id: GO:0071079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to the cartilage matrix protein chondroadherin.","definition_xrefs":["PMID:9281592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha2-beta1 integrin-chondroadherin complex","synonyms":[{"name":"ITGA2-ITGB1-CHAD complex","type":"narrow"}],"termid":"GO:0071079"}


id: PBO:0050228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 6","termid":"PBO:0050228"}


id: PBO:0087220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein involved in the formation of early endocytic sites; putative regulator of cytokinesis; homo-oligomerization is required for localization to and organization of endocytic sites; functions in autophagy of aberrant clathrin-mediated endocytosis (CME) protein condensates; binds membranes in a ubiquitin-dependent manner; interacts with Cmk2 and functions upstream of CMK2 in regulating non-apoptotic cell death; homolog of mammalian Eps15","termid":"PBO:0087220"}


id: PBO:0063282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 8","termid":"PBO:0063282"}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: PBO:0064603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 1","termid":"PBO:0064603"}


id: GO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an phosphate group to a serine residue at position 1 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-S1 phosphorylation (obsolete GO:0043989)","synonyms":[{"name":"histone H4 phosphorylation at S1","type":"exact"},{"name":"histone H4S1 phosphorylation","type":"exact"}],"termid":"GO:0043989"}


id: PBO:0119959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase acyl carrier protein","termid":"PBO:0119959"}


id: PBO:0061397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPPA antisense RNA 1","termid":"PBO:0061397"}


id: FYPO:0004652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring","termid":"FYPO:0004740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring morphology","synonyms":[{"name":"normal actomyosin contractile ring morphology during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring morphology during vegetative growth","type":"exact"},{"name":"normal mitotic contractile ring morphology","type":"exact"}],"termid":"FYPO:0004652"}


id: GO:0051138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:9133426","ISBN:0781735149","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell differentiation","termid":"GO:0046638"},{"relation_name":"is_a","term_name":"regulation of NK T cell differentiation","termid":"GO:0051136"},{"relation_name":"positively_regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of NK T cell differentiation","synonyms":[{"name":"activation of NK T cell differentiation","type":"narrow"},{"name":"positive regulation of NK T cell development","type":"related"},{"name":"positive regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of NK T-cell differentiation","type":"exact"},{"name":"positive regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"positive regulation of NKT cell differentiation","type":"exact"},{"name":"positive regulation of NT cell differentiation","type":"exact"},{"name":"positive regulation of natural T cell differentiation","type":"exact"},{"name":"positive regulation of natural killer T cell differentiation","type":"exact"},{"name":"stimulation of NK T cell differentiation","type":"narrow"},{"name":"up regulation of NK T cell differentiation","type":"exact"},{"name":"up-regulation of NK T cell differentiation","type":"exact"},{"name":"upregulation of NK T cell differentiation","type":"exact"}],"termid":"GO:0051138"}


id: MONDO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine adnexal tumor (obsolete MONDO:0015861)","secondary_identifiers":["Orphanet:180220"],"synonyms":[{"name":"syn: Rare tumor of ovaries and fallopian tubes","type":"exact"}],"termid":"MONDO:0015861","xrefs":{"Monarch":{"xref_id":"0015861"}}}


id: GO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy, a state of functional inactivation that occurs as part of tolerance induction, in B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell anergy","termid":"GO:0002515"},{"relation_name":"part_of","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"part_of","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell anergy","synonyms":[{"name":"central B lymphocyte anergy","type":"exact"},{"name":"central B-cell anergy","type":"exact"},{"name":"central B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002341"}


id: PBO:0064489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit B","termid":"PBO:0064489"}


id: PBO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis II protein Mes1","termid":"PBO:0001010"}


id: MONDO:0023084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyseal dysplasia dysmorphism camptodactyly","termid":"MONDO:0023084","xrefs":{"Monarch":{"xref_id":"0023084"}}}


id: MONDO:1011145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary agenesis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary agenesis, non-human animal","termid":"MONDO:1010290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary agenesis, horse","secondary_identifiers":["OMIA:002520-9796"],"termid":"MONDO:1011145","xrefs":{"Monarch":{"xref_id":"1011145"}}}


id: MONDO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchio-oto-renal syndrome in which the cause of the disease is a mutation in the SIX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchio-oto-renal syndrome","termid":"MONDO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiootorenal syndrome 2","secondary_identifiers":["DOID:0111424","MEDGEN:410081","OMIM:610896","GARD:15503","UMLS:C1970479"],"synonyms":[{"name":"BOR2","type":"related"},{"name":"SIX5 branchio-oto-renal syndrome","type":"exact"},{"name":"branchio-oto-renal syndrome caused by mutation in SIX5","type":"exact"},{"name":"branchiootorenal syndrome 2","type":"exact"},{"name":"branchiootorenal syndrome type 2","type":"exact"}],"termid":"MONDO:0012575","xrefs":{"Monarch":{"xref_id":"0012575"}}}


id: GO:0035635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bacterium enters a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:21187937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of bacterium into host cell","synonyms":[{"name":"bacterial entry into host cell","type":"exact"},{"name":"invasion of bacteria into host cell","type":"exact"}],"termid":"GO:0035635"}


id: PBO:0063124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 9","termid":"PBO:0063124"}


id: MONDO:0011633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2C (CMT2C) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by the association of vocal cord anomalies, impairment of respiratory muscles and sensorineural hearing loss with the distal hands and feet weakness. Onset is between infancy and the 6th decade.","definition_xrefs":["Orphanet:99937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2C","secondary_identifiers":["OMIM:606071","UMLS:C1853710","MEDGEN:342947","DOID:0110182","SCTID:717010007","GARD:1250"],"synonyms":[{"name":"CMT 2C","type":"related"},{"name":"CMT2C","type":"exact"},{"name":"Charcot Marie Tooth disease type 2C","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in TRPV4","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2C","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2C","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2C","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2C","type":"related"},{"name":"HMSN 2 C","type":"related"},{"name":"HMSN 2C","type":"related"},{"name":"HMSN2C","type":"exact"},{"name":"TRPV4 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal cominant axonal Charcot-Marie-Tooth disease type 2C","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2C","type":"exact"},{"name":"hereditary motor and sensory neuropathy 2 C","type":"related"},{"name":"hereditary motor and sensory neuropathy type IIc","type":"exact"},{"name":"hereditary motor and sensory neuropathy, type 2C","type":"related"},{"name":"hereditary motor and sensory neuropathy, type IIC","type":"related"}],"termid":"MONDO:0011633","xrefs":{"Monarch":{"xref_id":"0011633"}}}


id: GO:0090708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of a plant organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ axis polarity","termid":"GO:0090708"}


id: GO:1905170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to phagocytic vesicle","termid":"GO:1905169"},{"relation_name":"negatively_regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"down regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localisation to phagosome","type":"exact"},{"name":"down regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down regulation of protein recruitment to phagosome","type":"exact"},{"name":"down-regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localisation to phagosome","type":"exact"},{"name":"down-regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"down-regulation of protein recruitment to phagosome","type":"exact"},{"name":"downregulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localisation to phagosome","type":"exact"},{"name":"downregulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"downregulation of protein localization to phagocytic vesicle","type":"exact"},{"name":"downregulation of protein recruitment to phagosome","type":"exact"},{"name":"inhibition of protein localisation in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localisation to phagosome","type":"narrow"},{"name":"inhibition of protein localization in phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein localization to phagocytic vesicle","type":"narrow"},{"name":"inhibition of protein recruitment to phagosome","type":"narrow"},{"name":"negative regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein localisation to phagosome","type":"exact"},{"name":"negative regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"negative regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905170"}


id: GO:0046681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbamate stimulus. Carbamates are a group of insecticides and parasiticides that act by inhibiting cholinesterase.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbamate","synonyms":[{"name":"carbamate resistance","type":"related"},{"name":"carbamate susceptibility/resistance","type":"related"}],"termid":"GO:0046681"}


id: PBO:0085253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein of peroxisomes; involved in peroxisomal inheritance; recruitment to peroxisomes is mediated by interaction with Pex3p at the peroxisomal membrane; Inp1p and Pex3p tether peroxisomes to plasma membrane","termid":"PBO:0085253"}


id: PBO:0113476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIb of cytochrome c oxidase; cytochrome c oxidase is also known as respiratory Complex IV and is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly and activity of cytochrome c oxidase; phosphorylated; easily released from the intermembrane space, suggesting a loose association with Complex IV","termid":"PBO:0113476"}


id: MOD:00974
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3'-chlorotyrosine","termid":"MOD:00974"}


id: PBO:0068691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 72, pseudogene","termid":"PBO:0068691"}


id: PBO:0030027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_centromere_clustering_at_nuclear_periphery","termid":"PBO:0030027"}


id: PBO:0068925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 168, pseudogene","termid":"PBO:0068925"}


id: PBO:0073103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 7","termid":"PBO:0073103"}


id: PBO:0048159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FZD4 divergent transcript","termid":"PBO:0048159"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: GO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, membrane-bounded organelle found in some anaerobic protozoa, which participates in ATP and molecular hydrogen formation.","definition_xrefs":["PMID:11197234","PMID:11293569","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hydrogenosome","secondary_identifiers":["Wikipedia:Hydrogenosome"],"termid":"GO:0042566"}


id: MONDO:1012094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"granule cell type cerebellar hypoplasia, non-human animal","termid":"MONDO:1011842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granule cell type cerebellar hypoplasia, dog","secondary_identifiers":["OMIA:000427-9615"],"termid":"MONDO:1012094","xrefs":{"Monarch":{"xref_id":"1012094"}}}


id: PBO:0111910
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0111910"}


id: PBO:0065337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protogenin","termid":"PBO:0065337"}


id: MONDO:0024615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"T-cell and NK-cell neoplasm","secondary_identifiers":["MEDGEN:277781","UMLS:C1336554","NCIT:C27908"],"synonyms":[{"name":"T-cell and NK-cell neoplasm","type":"exact"},{"name":"T-cell neoplasm","type":"exact"}],"termid":"MONDO:0024615","xrefs":{"Monarch":{"xref_id":"0024615"}}}


id: PBO:0059894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 17","termid":"PBO:0059894"}


id: GO:0097638
data:
  {"annotated_genes":["SJAG_05346","SJAG_02605","SJAG_00991","SJAG_03591","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102295],"is_not":false,"summary":null,"term":"GO:0097638"},{"annotations":[95222,93637,112535,100804],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04637":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090467","GO:1902765"],"synonyms":[{"name":"L-arginine import into cell","type":"exact"},{"name":"arginine import","type":"broad"}],"termid":"GO:0097638","terms_by_termid":{"GO:0097638":null,"GO:1905589":null}}


id: MONDO:1012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysplasia, non-human animal","termid":"MONDO:1011953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, domestic cat","secondary_identifiers":["OMIA:000937-9685"],"termid":"MONDO:1012258","xrefs":{"Monarch":{"xref_id":"1012258"}}}


id: GO:0008009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:12183377","Wikipedia:Chemokine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine activity","termid":"GO:0005125"},{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0140677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemokine activity","termid":"GO:0008009"}


id: MONDO:0017911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cleft lip/palate-ectodermal dysplasia syndrome (obsolete MONDO:0017911)","termid":"MONDO:0017911","xrefs":{"Monarch":{"xref_id":"0017911"}}}


id: PBO:0066650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 1","termid":"PBO:0066650"}


id: PBO:0064423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 1","termid":"PBO:0064423"}


id: SO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for U3_snoRNA. U3 snoRNA is a member of the box C/D class of small nucleolar RNAs. The U3 snoRNA secondary structure is characterised by a small 5' domain (with boxes A and A'), and a larger 3' domain (with boxes B, C, C', and D), the two domains being linked by a single-stranded hinge. Boxes B and C form the B/C motif, which appears to be exclusive to U3 snoRNAs, and boxes C' and D form the C'/D motif. The latter is functionally similar to the C/D motifs found in other snoRNAs. The 5' domain and the hinge region act as a pre-rRNA-binding domain. The 3' domain has conserved protein-binding sites. Both the box B/C and box C'/D motifs are sufficient for nuclear retention of U3 snoRNA. The box C'/D motif is also necessary for nucleolar localization, stability and hypermethylation of U3 snoRNA. Both box B/C and C'/D motifs are involved in specific protein interactions and are necessary for the rRNA processing functions of U3 snoRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA_gene","termid":"SO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_snoRNA_gene","synonyms":[{"name":"small nucleolar RNA U3 gene, snoRNA U3 gene, U3 small nucleolar RNA gene, U3 snoRNA gene","type":"exact"}],"termid":"SO:0002378"}


id: MONDO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome (obsolete MONDO:0044716)","termid":"MONDO:0044716","xrefs":{"Monarch":{"xref_id":"0044716"}}}


id: MONDO:0011673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 15q25-q26.","definition_xrefs":["DOID:0110560","PMID:11571554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 30","secondary_identifiers":["UMLS:C1847972","GARD:18114","MEDGEN:341116","MESH:C564706","OMIM:606451"],"synonyms":[{"name":"DFNA30","type":"narrow"},{"name":"autosomal dominant deafness 30","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 30","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 30","type":"narrow"},{"name":"deafness, autosomal dominant 30","type":"narrow"}],"termid":"MONDO:0011673","xrefs":{"Monarch":{"xref_id":"0011673"}}}


id: PBO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 49","termid":"PBO:0080088"}


id: MONDO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive loss of tooth tissue by chemical processes that do not involve bacterial action. (Jablonski, Dictionary of Dentistry, 1992, p296)","definition_xrefs":["MESH:D014077-modified"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth erosion, non-bacterial","secondary_identifiers":["ICD9:521.3","ICD9:521.34","MEDGEN:21584","DOID:2498","ICD9:521.35","MESH:D014077","UMLS:C0040436","ICD9:521.30","SCTID:82212003"],"synonyms":[{"name":"generalised erosion","type":"related"},{"name":"generalized erosion","type":"related"},{"name":"localised erosion","type":"related"},{"name":"localized erosion","type":"related"},{"name":"tooth erosion","type":"exact"}],"termid":"MONDO:0002325","xrefs":{"Monarch":{"xref_id":"0002325"}}}


id: GO:0046678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacteriocin stimulus. A bacteriocin is a protein substance released by certain bacteria that kills but does not lyse closely related strains of bacteria. Specific bacteriocins attach to specific receptors on cell walls and induce specific metabolic block, e.g. cessation of nucleic acid or protein synthesis of oxidative phosphorylation.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacteriocin","synonyms":[{"name":"bacteriocin susceptibility/resistance","type":"related"}],"termid":"GO:0046678"}


id: SO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons GCN (GCT, GCC, GCA and GCG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine","synonyms":[{"name":"A","type":"exact"},{"name":"Ala","type":"exact"}],"termid":"SO:0001435"}


id: GO:1990021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of axon of a CA3 pyramidal neuron that projects to hippocampal area CA1.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer axon collateral","synonyms":[{"name":"Schaffer collateral","type":"broad"}],"termid":"GO:1990021"}


id: PBO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF-amide peptide precursor","termid":"PBO:0061306"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: PBO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to regulate endocytosis of plasma membrane proteins; regulates by recruiting the ubiquitin ligase Rsp5p to its target in the plasma membrane; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086098"}


id: MONDO:0013280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of round non-lipogenic primitive mesenchymal cells and small signet ring lipoblasts within a myxoid stoma with a branching vascular pattern. This category includes hypercellular lesions with round cell morphology, formerly known as round cell liposarcoma.","definition_xrefs":["NCIT:C27781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid/round cell liposarcoma","termid":"MONDO:0020561"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid liposarcoma","secondary_identifiers":["EFO:0000613","ICD9:171.9","DOID:5363","SCTID:404069006","MESH:D018208","UMLS:C0206634","MEDGEN:104903","ICDO:8852/3","DOID:5709","OMIM:613488","GARD:15667"],"synonyms":[{"name":"Myxoliposarcoma","type":"related"},{"name":"mixed-type liposarcoma","type":"related"},{"name":"myxoid liposarcoma","type":"exact"},{"name":"myxoid liposarcoma (morphologic abnormality)","type":"exact"},{"name":"myxoid/round cell liposarcoma","type":"broad"}],"termid":"MONDO:0013280","xrefs":{"Monarch":{"xref_id":"0013280"}}}


id: PBO:0004821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS binding protein Abp2","termid":"PBO:0004821"}


id: PBO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (predicted)","termid":"PBO:0000730"}


id: PBO:0091076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups","termid":"PBO:0091076"}


id: PBO:0005801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex TPR repeat subunit Ski3 (predicted)","termid":"PBO:0005801"}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: GO:0061078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell and contributes to the immune response.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of prostaglandin secretion","termid":"GO:0032308"},{"relation_name":"positively_regulates","term_name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin secretion involved in immune response","synonyms":[{"name":"positive regulation of prostaglandin secretion during immune response","type":"related"}],"termid":"GO:0061078"}


id: GO:1904966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin E biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20823244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"regulation of vitamin E biosynthetic process","termid":"GO:1904965"},{"relation_name":"positively_regulates","term_name":"vitamin E biosynthetic process","termid":"GO:0010189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of vitamin E biosynthetic process","synonyms":[{"name":"activation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"activation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"activation of tocopherol biosynthesis","type":"narrow"},{"name":"activation of tocopherol biosynthetic process","type":"narrow"},{"name":"activation of vitamin E anabolism","type":"narrow"},{"name":"activation of vitamin E biosynthesis","type":"narrow"},{"name":"activation of vitamin E biosynthetic process","type":"narrow"},{"name":"activation of vitamin E formation","type":"narrow"},{"name":"activation of vitamin E synthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"positive regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"positive regulation of tocopherol biosynthesis","type":"exact"},{"name":"positive regulation of tocopherol biosynthetic process","type":"exact"},{"name":"positive regulation of vitamin E anabolism","type":"exact"},{"name":"positive regulation of vitamin E biosynthesis","type":"exact"},{"name":"positive regulation of vitamin E formation","type":"exact"},{"name":"positive regulation of vitamin E synthesis","type":"exact"},{"name":"up regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up regulation of tocopherol biosynthesis","type":"exact"},{"name":"up regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E anabolism","type":"exact"},{"name":"up regulation of vitamin E biosynthesis","type":"exact"},{"name":"up regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up regulation of vitamin E formation","type":"exact"},{"name":"up regulation of vitamin E synthesis","type":"exact"},{"name":"up-regulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"up-regulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"up-regulation of tocopherol biosynthesis","type":"exact"},{"name":"up-regulation of tocopherol biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E anabolism","type":"exact"},{"name":"up-regulation of vitamin E biosynthesis","type":"exact"},{"name":"up-regulation of vitamin E biosynthetic process","type":"exact"},{"name":"up-regulation of vitamin E formation","type":"exact"},{"name":"up-regulation of vitamin E synthesis","type":"exact"},{"name":"upregulation of alpha-tocopherol biosynthesis","type":"narrow"},{"name":"upregulation of alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"upregulation of tocopherol biosynthesis","type":"exact"},{"name":"upregulation of tocopherol biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E anabolism","type":"exact"},{"name":"upregulation of vitamin E biosynthesis","type":"exact"},{"name":"upregulation of vitamin E biosynthetic process","type":"exact"},{"name":"upregulation of vitamin E formation","type":"exact"},{"name":"upregulation of vitamin E synthesis","type":"exact"}],"termid":"GO:1904966"}


id: GO:1904625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["PMID:22988142","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glycinergic","termid":"GO:0060093"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"negatively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glycine secretion, neurotransmission","synonyms":[{"name":"down regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"downregulation of glycine secretion, neurotransmission","type":"exact"},{"name":"inhibition of glycine secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904625"}


id: PBO:0065855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12, member RAS oncogene family","termid":"PBO:0065855"}


id: PBO:0060337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 2","termid":"PBO:0060337"}


id: PBO:0049441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 18","termid":"PBO:0049441"}


id: GO:0016226
data:
  {"annotated_genes":["SJAG_02457","SJAG_02306","SJAG_01238","SJAG_01615","SJAG_02994","SJAG_00186","SJAG_00894","SJAG_00066","SJAG_03862","SJAG_04014","SJAG_00532","SJAG_02866","SJAG_04397","SJAG_00455","SJAG_01417","SJAG_02895","SJAG_01063","SJAG_03701","SJAG_00972","SJAG_03222","SJAG_04016","SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57327,59260,70015,80776,91152],"is_not":false,"summary":null,"term":"GO:0016226"},{"annotations":[101169,68805,79938,105057,111673,111867,94854,95083,115888,69407,100184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[103556,111854,100861,111240,119885,94670,90090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah","GOC:jl","GOC:pde","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1362409","Reactome:R-HSA-2564830"],"synonyms":[{"name":"iron-sulfur cluster biosynthesis","type":"related"},{"name":"iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:0016226","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: MONDO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor arising in an anatomic site other than the testis or ovary (e.g., central nervous system, lung, mediastinum, and retroperitoneum).","definition_xrefs":["NCIT:C3918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragonadal germ cell tumor","secondary_identifiers":["GARD:9325","MEDGEN:75506","UMLS:C0262963","Orphanet:363579"],"synonyms":[{"name":"extragonadal germ cell neoplasm","type":"exact"},{"name":"extragonadal germ cell neoplasms","type":"exact"},{"name":"extragonadal germ cell tumor","type":"exact"},{"name":"neoplasm of extragonadal germ cell","type":"exact"},{"name":"neoplasm of the extragonadal germ cell","type":"exact"},{"name":"primary extragonadal germ cell tumor","type":"exact"},{"name":"primary extragonadal germ cell tumour","type":"exact"},{"name":"tumor of extragonadal germ cell","type":"exact"},{"name":"tumor of the extragonadal germ cell","type":"exact"},{"name":"tumour of extragonadal germ cell","type":"exact"},{"name":"tumour of the extragonadal germ cell","type":"exact"}],"termid":"MONDO:0018201","xrefs":{"Monarch":{"xref_id":"0018201"}}}


id: PBO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HGT1","termid":"PBO:0012016"}


id: GO:0006277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the number of copies of a gene is increased in certain cells as extra copies of DNA are made in response to certain signals of cell development or of stress from the environment.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA amplification","termid":"GO:0006277"}


id: PBO:0043762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX11","termid":"PBO:0043762"}


id: GO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the correct R8 cell spacing pattern in a compound eye.","definition_xrefs":["GOC:tb","PMID:11880339","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell spacing in compound eye","synonyms":[{"name":"down regulation of R8 spacing","type":"exact"},{"name":"down-regulation of R8 spacing","type":"exact"},{"name":"downregulation of R8 spacing","type":"exact"},{"name":"inhibition of R8 spacing","type":"narrow"}],"termid":"GO:0045469"}


id: PBO:0091045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwfJ family protein, splicing factor","termid":"PBO:0091045"}


id: PBO:0078676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 9-1","termid":"PBO:0078676"}


id: PBO:0065473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 11","termid":"PBO:0065473"}


id: PBO:0073438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFI1 centrin binding protein","termid":"PBO:0073438"}


id: MONDO:0006269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liver inflammatory myofibroblastic tumor (obsolete MONDO:0006269)","termid":"MONDO:0006269","xrefs":{"Monarch":{"xref_id":"0006269"}}}


id: PBO:0075820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine rich single-pass membrane protein 1","termid":"PBO:0075820"}


id: PR:Q09890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C584.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.16c","synonyms":[{"name":"Spom972h-SPCC584.16c","type":"exact"}],"termid":"PR:Q09890"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: PBO:0079058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 13-1","termid":"PBO:0079058"}


id: GO:0047879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 malonyl-CoA + propionyl-CoA = 7 CoA + 6-deoxyerythronolide B.","definition_xrefs":["MetaCyc:ERYTHRONOLIDE-SYNTHASE-RXN","EC:2.3.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"erythronolide synthase activity","secondary_identifiers":["RHEA:23068"],"synonyms":[{"name":"erythronolide condensing enzyme activity","type":"related"},{"name":"malonyl-CoA:propionyl-CoA malonyltransferase (cyclizing)","type":"related"}],"termid":"GO:0047879"}


id: FYPO:0000827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature cell cycle phase transition","synonyms":[{"name":"advanced cell cycle phase transition","type":"exact"},{"name":"premature cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"premature cell cycle phase transition during vegetative growth","type":"exact"},{"name":"premature cell cycle progression","type":"exact"},{"name":"premature cell cycle progression during vegetative growth","type":"exact"}],"termid":"FYPO:0000827"}


id: PBO:0027728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_salt_stress","termid":"PBO:0027728"}


id: GO:0070905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"serine binding","synonyms":[{"name":"Ser binding","type":"exact"}],"termid":"GO:0070905"}


id: PR:O43057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide exchange factor MSS4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13276:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide exchange factor MSS4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.04c","secondary_identifiers":["UniProtKB:O43057"],"synonyms":[{"name":"Spom972h-RABIF","type":"exact"}],"termid":"PR:O43057"}


id: GO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of chemokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"positively_regulates","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine production","secondary_identifiers":["GO:0045080","GO:0090197"],"synonyms":[{"name":"activation of chemokine production","type":"narrow"},{"name":"positive regulation of chemokine biosynthetic process","type":"narrow"},{"name":"positive regulation of chemokine secretion","type":"narrow"},{"name":"stimulation of chemokine production","type":"narrow"},{"name":"up regulation of chemokine production","type":"exact"},{"name":"up-regulation of chemokine production","type":"exact"},{"name":"upregulation of chemokine production","type":"exact"}],"termid":"GO:0032722"}


id: PBO:0076369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 6","termid":"PBO:0076369"}


id: MONDO:0017227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 autoimmune pancreatitis is a form of autoimmune pancreatitis seen in elderly males (>60 years) and presenting with abdominal pain, steatorrhea, obstructive jaundice and other organ (bile duct, kidneys and retroperitoneum) involvement. It is thought to be due to an immunoglobulin G4 (IgG4)-associated systemic disease.","definition_xrefs":["Orphanet:280302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pancreatitis","termid":"MONDO:0005003"},{"relation_name":"is_a","term_name":"autoimmune pancreatitis","termid":"MONDO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune pancreatitis type 1","secondary_identifiers":["EFO:1000780","MEDGEN:927912","SCTID:722872000","UMLS:C4302243","PMID:25985088","GARD:21076"],"synonyms":[{"name":"AIP type 1","type":"exact"},{"name":"IgG4-related pancreatitis","type":"exact"},{"name":"autoimmune pancreatitis type 1","type":"exact"},{"name":"lymphoplasmacytic sclerosing pancreatitis","type":"exact"}],"termid":"MONDO:0017227","xrefs":{"Monarch":{"xref_id":"0017227"}}}


id: GO:0061655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of Pup from one protein to another via the reaction X-Pup + Y = Y-Pup + X, where both the X-Pup and Y-Pup linkages are thioester bonds between the C-terminal amino acid of Pup and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"},{"relation_name":"is_a","term_name":"Pup transferase activity","termid":"GO:0072496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0019787","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"Pup conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061655"}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: GO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of flower development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:21689171","PMID:19380421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ senescence","termid":"GO:0080187"}


id: PBO:0077563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM269 divergent transcript","termid":"PBO:0077563"}


id: GO:0030202
data:
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id: FYPO:0007003
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id: PBO:0000552
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id: PBO:0015654
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id: PBO:0086731
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id: GO:0001608
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id: GO:0140532
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id: MONDO:0024322
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id: MONDO:0014292
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id: MONDO:0004831
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id: MOD:01240
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id: MONDO:0021424
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id: PBO:0072786
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id: PBO:0011096
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id: PBO:0005783
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id: MONDO:0001085
data:
  {"annotated_genes":["SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"}]},"cv_name":"mondo","definition":"Inflammation of the renal tubules and supporting tissues of the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"interstitial nephritis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1063","ICD9:583.89","SCTID:28689008","UMLS:C0041349","NCIT:C26834","MEDGEN:11952","ICD10CM:N10-N16","NANDO:2200136","MESH:D009395"],"synonyms":[{"name":"Tubulointerstitial nephritis","type":"exact"},{"name":"renal tubulo-interstitial disease","type":"exact"}],"termid":"MONDO:0001085","terms_by_termid":{"MONDO:0013898":null},"xrefs":{"Monarch":{"xref_id":"0001085"}}}


id: PBO:0091812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP citrate synthase subunit 1","termid":"PBO:0091812"}


id: RO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"this relation holds between c and p when c is part of some c', and c' is capable of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}


id: GO:1905452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in regulation of stem cell proliferation.","definition_xrefs":["GO_REF:0000060","GOC:bc","GOC:TermGenie","PMID:25640183","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of stem cell proliferation (obsolete GO:1905452)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in regulation of stem cell proliferation","type":"narrow"}],"termid":"GO:1905452"}


id: PATO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized","synonyms":[{"name":"focal","type":"exact"},{"name":"localised","type":"exact"}],"termid":"PATO:0000627"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: MONDO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign protruding lesion arising either from the endometrial cavity (endometrial polyp) or the endocervix (endocervical polyp). It may occasionally recur following complete resection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine polyp","secondary_identifiers":["SCTID:11314008","MEDGEN:57628","UMLS:C0156369","NCIT:C3662","DOID:9042","ICD10CM:N84.0","EFO:0009484","ICD9:621.0"],"synonyms":[{"name":"endometrial/uterine polyp","type":"exact"},{"name":"polyp of corpus uteri","type":"exact"},{"name":"polyp of endometrium","type":"narrow"},{"name":"polyp of the uterus","type":"exact"},{"name":"polyp of uterus","type":"exact"},{"name":"polyp, uterus","type":"exact"},{"name":"uterine polyp","type":"exact"},{"name":"uterus polyp","type":"exact"}],"termid":"MONDO:0004701","xrefs":{"Monarch":{"xref_id":"0004701"}}}


id: GO:0048777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leucophore differentiation","termid":"GO:0048775"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leucophore differentiation","synonyms":[{"name":"activation of leucophore differentiation","type":"narrow"},{"name":"stimulation of leucophore differentiation","type":"narrow"},{"name":"up regulation of leucophore differentiation","type":"exact"},{"name":"up-regulation of leucophore differentiation","type":"exact"},{"name":"upregulation of leucophore differentiation","type":"exact"}],"termid":"GO:0048777"}


id: PBO:0062606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 1 pseudogene","termid":"PBO:0062606"}


id: MONDO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation or irritation of a synovial bursa, the fibrous sac that acts as a cushion between moving structures of bones, muscles, tendons or skin.","definition_xrefs":["MESH:D002062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"synovial bursa disorder","termid":"MONDO:0056802"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bursitis","secondary_identifiers":["MEDGEN:691","ICD9:727.3","UMLS:C0006444","DOID:2965","NCIT:C94407","icd11.foundation:1984620329","SCTID:84017003"],"synonyms":[{"name":"Bursitides","type":"related"},{"name":"Capsulitides","type":"related"},{"name":"Capsulitides, adhesive","type":"related"},{"name":"Capsulitides, shoulder adhesive","type":"related"},{"name":"adhesive Capsulitides","type":"related"},{"name":"adhesive Capsulitides, shoulder","type":"related"},{"name":"adhesive capsulitis","type":"related"},{"name":"adhesive capsulitis of the shoulder","type":"related"},{"name":"adhesive capsulitis, shoulder","type":"related"},{"name":"capsulitis","type":"related"},{"name":"capsulitis, adhesive","type":"related"},{"name":"capsulitis, shoulder adhesive","type":"related"},{"name":"frozen shoulder","type":"related"},{"name":"frozen shoulders","type":"related"},{"name":"inflammation of synovial bursa","type":"exact"},{"name":"shoulder adhesive Capsulitides","type":"related"},{"name":"shoulder adhesive capsulitis","type":"related"},{"name":"shoulder, frozen","type":"related"},{"name":"shoulders, frozen","type":"related"},{"name":"synovial bursa inflammation","type":"exact"}],"termid":"MONDO:0002471","xrefs":{"Monarch":{"xref_id":"0002471"}}}


id: FYPO:0007160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of nucleosomes on newly replicated DNA is abnormal.","definition_xrefs":["GO:0006335","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal DNA replication-dependent nucleosome assembly","synonyms":[{"name":"abnormal DNA replication-coupled nucleosome assembly","type":"exact"},{"name":"abnormal DNA replication-dependent nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"abnormal DNA replication-dependent nucleosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007160"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN","EC:3.5.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: PR:O94700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10245:SF1","PRO:DNx","OMA:SCHPO02913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: MONDO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PYCR2-related microcephaly-progressive leukoencephalopathy is a rare, genetic, syndromic intellectual disability disorder characterized by progressive postnatal microcephaly, cerebral hypomyelination and severe psychomotor developmental delayed with absent speech, as well as axial hypotonia, appendicular hypertonia with hyperextensibility of the wrists and ankles, hyperreflexia, severe muscle wasting and failure to thrive. Associated craniofacial dysmorphism includes triangular facies with bitemporal narrowing, down- or upslanting palpebral fissures, malar hypoplasia, large malformed ears with overfolded helices, upturned bulbous nose, long smooth philtrum and thin vermilion borders.","definition_xrefs":["Orphanet:481152"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYCR2-related microcephaly-progressive leukoencephalopathy","secondary_identifiers":["GARD:17873"],"termid":"MONDO:0018825","xrefs":{"Monarch":{"xref_id":"0018825"}}}


id: FYPO:0008099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the homologous chromosomes do not migrate toward the spindle pole in spindle elongation phase I (anaphase A).","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished homologous chromosome movement at anaphase A","termid":"FYPO:0008099"}


id: GO:0006931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions.","definition_xrefs":["PMID:11944043","PMID:14657486","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:0006931"}


id: PBO:0087930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to the maintenance of membrane lipid asymmetry in post-Golgi secretory vesicles; role in protein trafficking between the Golgi and endosomal system; localizes to the trans-Golgi network; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone","termid":"PBO:0087930"}


id: MONDO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic infection of the conjunctiva and cornea caused by chlamydia trachomatis.","definition_xrefs":["MESH:D014141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trachoma","secondary_identifiers":["icd11.foundation:372424530","DOID:11265","ICD9:076","SCTID:2576002","ICD9:076.9","ICD9:076.1","MEDGEN:52801","ICD9:076.0","UMLS:C0040592"],"synonyms":[{"name":"active stage trachoma","type":"exact"},{"name":"trachoma dubium","type":"exact"}],"termid":"MONDO:0001249","xrefs":{"Monarch":{"xref_id":"0001249"}}}


id: MONDO:0009189
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87585,87586],"is_not":false,"summary":null,"term":"MONDO:0009189"}]},"cv_name":"mondo","definition":"Multiple epiphyseal dysplasia type 4 is a multiple epiphyseal dysplasia with a late-childhood onset, characterized by joint pain involving hips, knees, wrists, and fingers with occasional limitation of joint movements, deformity of hands, feet, and knees (club foot, clinodactyly, brachydactyly), scoliosis and slightly reduced adult height. Radiographs display flat epiphyses with early arthritis of the hip, and double-layered patella. Multiple epiphyseal dysplasia type 4 follows an autosomal recessive mode of transmission. The disease is allelic to diastrophic dwarfism, atelosteogenesis type 2 and achondrogenesis type 1B with whom it forms a clinical continuum.","definition_xrefs":["Orphanet:93307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"SLC26A2-related skeletal dysplasia","termid":"MONDO:0100592"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715672007","DOID:0070300","GARD:9793","UMLS:C1847593","MEDGEN:376164","NORD:1881","MESH:C535504","ICD10CM:Q77.3","OMIM:226900","icd11.foundation:1927114777"],"synonyms":[{"name":"EDM4","type":"exact"},{"name":"MED4","type":"exact"},{"name":"Polyepiphyseal dysplasia type 4","type":"exact"},{"name":"Recessive Multiple Epiphyseal Dysplasia","type":"exact"},{"name":"SLC26A2 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"autosomal recessive multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple 4","type":"related"},{"name":"epiphyseal dysplasia, multiple, 4","type":"related"},{"name":"epiphyseal dysplasia, multiple, type 4","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in SLC26A2","type":"exact"},{"name":"multiple epiphyseal dysplasia 4","type":"related"},{"name":"multiple epiphyseal dysplasia with Bilayered patellae","type":"related"},{"name":"multiple epiphyseal dysplasia with clubfoot","type":"related"},{"name":"multiple epiphyseal dysplasia with double-layered patella","type":"related"},{"name":"multiple epiphyseal dysplasia, autosomal recessive","type":"related"},{"name":"rMED","type":"exact"}],"termid":"MONDO:0009189","terms_by_termid":{"MONDO:0009189":null},"xrefs":{"Monarch":{"xref_id":"0009189"}}}


id: PR:O74752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mas5 gene.","definition_xrefs":["UniProtKB:O74752","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein import protein mas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.11","synonyms":[{"name":"Spom972h-mas5","type":"exact"}],"termid":"PR:O74752"}


id: GO:1901405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole catabolic process","termid":"GO:1901404"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole catabolic process","synonyms":[{"name":"down regulation of tetrapyrrole breakdown","type":"exact"},{"name":"down regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole catabolism","type":"exact"},{"name":"down regulation of tetrapyrrole degradation","type":"exact"},{"name":"down-regulation of tetrapyrrole breakdown","type":"exact"},{"name":"down-regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole catabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole degradation","type":"exact"},{"name":"downregulation of tetrapyrrole breakdown","type":"exact"},{"name":"downregulation of tetrapyrrole catabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole catabolism","type":"exact"},{"name":"downregulation of tetrapyrrole degradation","type":"exact"},{"name":"inhibition of tetrapyrrole breakdown","type":"exact"},{"name":"inhibition of tetrapyrrole catabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole catabolism","type":"exact"},{"name":"inhibition of tetrapyrrole degradation","type":"exact"},{"name":"negative regulation of tetrapyrrole breakdown","type":"exact"},{"name":"negative regulation of tetrapyrrole catabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole degradation","type":"exact"}],"termid":"GO:1901405"}


id: GO:1990013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexagonal array of electron dense particles attached to the cytoplasmic face of the presynaptic membrane.","definition_xrefs":["ISBN:0716723808","NIF_Subcellular:sao1730664005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic grid","synonyms":[{"name":"pre-synaptic grid","type":"exact"}],"termid":"GO:1990013"}


id: MONDO:0003861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eccrine adenocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar eccrine adenocarcinoma","secondary_identifiers":["MEDGEN:384495","UMLS:C2202743","DOID:6339"],"synonyms":[{"name":"eccrine carcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva eccrine carcinoma","type":"exact"},{"name":"vulvar eccrine adenocarcinoma","type":"exact"}],"termid":"MONDO:0003861","xrefs":{"Monarch":{"xref_id":"0003861"}}}


id: PBO:0054078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1428","termid":"PBO:0054078"}


id: PR:Q9P7J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An EKC/KEOPS complex subunit TPRKB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit cgi121 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.12","secondary_identifiers":["UniProtKB:Q9P7J3"],"synonyms":[{"name":"SPCC24B10.12","type":"related"},{"name":"Spom972h-TPRKB","type":"exact"}],"termid":"PR:Q9P7J3"}


id: PBO:0084795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; member of the LYR protein family; mutations in human ortholog SDHAF1 are associated with infantile leukoencephalopathy","termid":"PBO:0084795"}


id: SO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified by manipulations in vitro.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_transposable_element","synonyms":[{"name":"engineered transposable element","type":"exact"}],"termid":"SO:0000798"}


