# terms

id: PBO:0078658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 11-1","termid":"PBO:0078658"}


id: MONDO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000817 (obsolete MONDO:0000817)","termid":"MONDO:0000817","xrefs":{"Monarch":{"xref_id":"0000817"}}}


id: PBO:0070132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 46 pseudogene","termid":"PBO:0070132"}


id: PBO:0116248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid raft associated CH-OH group oxidoreductase, implicated in lipid/sterol metabolism","termid":"PBO:0116248"}


id: PBO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_microtubule_end_during_mitotic_interphase","termid":"PBO:0035873"}


id: GO:0031227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of endoplasmic reticulum membrane (obsolete GO:0031227)","synonyms":[{"name":"intrinsic to endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0031227"}


id: PBO:0042111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC183 antisense RNA 1","termid":"PBO:0042111"}


id: PBO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENATAC divergent transcript","termid":"PBO:0042717"}


id: PBO:0066442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 3","termid":"PBO:0066442"}


id: PBO:0065310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 30, pseudogene","termid":"PBO:0065310"}


id: GO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}


id: MOD:01817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-oxo-L-tryptophan.","definition_xrefs":["PubMed:9461080","RESID:AA0543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of tryptophan to 2'-oxo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2'-oxo-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2-oxo-L-tryptophan","type":"exact"},{"name":"2-oxotryptophan","type":"exact"}],"termid":"MOD:01817"}


id: PBO:0089615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport protein Avl9","termid":"PBO:0089615"}


id: PBO:0041153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 8","termid":"PBO:0041153"}


id: PBO:0069038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 283, pseudogene","termid":"PBO:0069038"}


id: GO:1990562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An exosome complex that is assembled in the multivesicular body (MVB) membrane and chaperoned to the exosome by the ESCRT-III machinery.","definition_xrefs":["PMID:22660413","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular exosome complex","termid":"GO:1990563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"syndecan-syntenin-ALIX complex","synonyms":[{"name":"exosome complex","type":"broad"}],"termid":"GO:1990562"}


id: GO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-sulfoacetaldehyde + H2O = acetate + sulfite.","definition_xrefs":["MetaCyc:SULFOACETALDEHYDE-LYASE-RXN","EC:4.4.1.12"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfoacetaldehyde lyase activity (obsolete GO:0050312)","synonyms":[{"name":"sulphoacetaldehyde lyase activity","type":"exact"}],"termid":"GO:0050312"}


id: GO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0030947"}


id: GO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in cell wall organization or biogenesis (obsolete GO:0000198)","synonyms":[{"name":"activation of MAP kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKK activity","type":"exact"}],"termid":"GO:0000198"}


id: SOFP:keywords
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keywords","termid":"SOFP:keywords"}


id: PBO:0084042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase of the endoplasmic reticulum (ER); negatively regulates COPII vesicle formation; prevents production of vesicles with defective subunits; required for proper discrimination between resident ER proteins and Golgi-bound cargo molecules; functional ortholog of human PGAP1, mutation of which is associated with intellectual disability and encephalopathy","termid":"PBO:0084042"}


id: GO:0097205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which fluid circulating through the body is filtered through a barrier system.","definition_xrefs":["GOC:pr","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration","termid":"GO:0097205"}


id: PBO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 8","termid":"PBO:0071710"}


id: MONDO:0007776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypersensitivity pneumonitis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity pneumonitis, familial","secondary_identifiers":["GARD:8240","MESH:C536846","UMLS:C1840386","OMIM:145300","MEDGEN:326724"],"synonyms":[{"name":"hereditary hypersensitivity pneumonitis","type":"exact"},{"name":"hypersensitivity pneumonitis, familial","type":"exact"}],"termid":"MONDO:0007776","xrefs":{"Monarch":{"xref_id":"0007776"}}}


id: PBO:0070189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 107 pseudogene","termid":"PBO:0070189"}


id: GO:0016618
data:
  {"annotated_genes":["SJAG_00281","SJAG_01432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76919,77052],"is_not":false,"summary":null,"term":"GO:0016618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD(P)+ = 3-hydroxypyruvate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxypyruvate reductase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HYDROXYPYRUVATE-REDUCTASE-RXN"],"synonyms":[{"name":"D-glycerate dehydrogenase activity","type":"related"},{"name":"D-glycerate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"NADH:hydroxypyruvate reductase activity","type":"related"},{"name":"beta-hydroxypyruvate reductase activity","type":"related"},{"name":"hydroxypyruvate reductase activity","type":"broad"}],"termid":"GO:0016618","terms_by_termid":{"GO:0016618":null}}


id: MONDO:0010122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital thrombotic thrombocytopenic purpura is the hereditary form of thrombotic thrombocytopenic purpura (TTP) characterized by profound peripheral thrombocytopenia, microangiopathic hemolytic anemia (MAHA) and single or multiple organ failure of variable severity.","definition_xrefs":["Orphanet:93583"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"thrombotic thrombocytopenic purpura","termid":"MONDO:0018896"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"congenital thrombotic thrombocytopenic purpura","secondary_identifiers":["SCTID:373420004","ICD10CM:M31.3","NCIT:C131657","MEDGEN:224783","UMLS:C1268935","ICD9:287.33","GARD:9430","OMIM:274150","NANDO:1200317"],"synonyms":[{"name":"Microangiopathic hemolytic Anaemia","type":"related"},{"name":"Microangiopathic hemolytic Anemia","type":"related"},{"name":"Microangiopathic hemolytic Anemia, congenital","type":"related"},{"name":"Schulman-Upshaw syndrome","type":"related"},{"name":"TTP","type":"related"},{"name":"TTP, congenital","type":"related"},{"name":"USS","type":"related"},{"name":"Upshaw Factor, deficiency of","type":"related"},{"name":"Upshaw-Schulman syndrome","type":"exact"},{"name":"congenital ADAMTS-13 deficiency","type":"exact"},{"name":"congenital ADAMTS13 deficiency","type":"exact"},{"name":"congenital TTP","type":"exact"},{"name":"congenital thrombotic thrombocytopenic purpura","type":"exact"},{"name":"familial TTP","type":"exact"},{"name":"hereditary thrombotic thrombocytopenic purpura","type":"exact"},{"name":"thrombotic microangiopathy, familial","type":"related"},{"name":"thrombotic thrombocytopenic purpura, congenital","type":"related"},{"name":"thrombotic thrombocytopenic purpura, familial","type":"related"},{"name":"thrombotic thrombocytopenic purpura, hereditary","type":"exact"}],"termid":"MONDO:0010122","xrefs":{"Monarch":{"xref_id":"0010122"}}}


id: GO:1903205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced cell death (obsolete GO:1903205)","synonyms":[{"name":"protection against hydrogen peroxide-mediated cell death","type":"related"},{"name":"regulation of cell death in response to H2O2","type":"exact"},{"name":"regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1903205"}


id: PBO:0069782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1067, pseudogene","termid":"PBO:0069782"}


id: MONDO:0016595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute systemic infection caused by the inhalation of Bacillus anthracis spores (e.g. through infected animal products, bioterrorism) and characterized by an initial stage where patients present with non specific symptoms (fever, cough, chills, fatigue) that is followed by an acute phase during which hemorrhagic mediastinitis occurs that can progress into meningitis, gastrointestinal involvement, and refractory shock, that can be fatal, if left untreated.","definition_xrefs":["Orphanet:247257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthrax infection","termid":"MONDO:0005119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhalational anthrax","secondary_identifiers":["GARD:20657","MESH:C571912","DOID:0050160","ICD9:022.1","MEDGEN:57841","UMLS:C0155866","MedDRA:10035667","SCTID:11389007"],"synonyms":[{"name":"inhalation anthrax","type":"related"},{"name":"inhalation anthrax disease","type":"exact"},{"name":"pulmonary anthrax","type":"exact"},{"name":"respiratory anthrax","type":"exact"},{"name":"respiratory anthrax disease","type":"exact"},{"name":"wool-sorters' disease","type":"exact"},{"name":"woolsorters' disease","type":"exact"}],"termid":"MONDO:0016595","xrefs":{"Monarch":{"xref_id":"0016595"}}}


id: MONDO:0018230
data:
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id: MONDO:0013272
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id: PBO:0117133
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id: GO:0035130
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id: MONDO:0003229
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id: GO:2000009
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id: MONDO:0018051
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id: PBO:0078467
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id: MONDO:0009793
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id: FYPO:0007586
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id: GO:0070229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte apoptotic process","synonyms":[{"name":"down regulation of lymphocyte apoptosis","type":"exact"},{"name":"down-regulation of lymphocyte apoptosis","type":"exact"},{"name":"downregulation of lymphocyte apoptosis","type":"exact"},{"name":"inhibition of lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of lymphocyte apoptosis","type":"narrow"}],"termid":"GO:0070229"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["RHEA:16481","EC:2.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["KEGG_REACTION:R00075","MetaCyc:2.5.1.43-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: MOD:01223
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11710128","OMSSA:41","PubMed:957432","PubMed:3155470","Unimod:126#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-sulfanylpropanoyl (N-term and Lys)","termid":"MOD:00497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioacylation of primary amines - site N-term","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"Thioacyl","type":"related"},{"name":"ntermpeptioacetyl","type":"exact"},{"name":"thioacylation of primary amines (N-term and Lys)","type":"related"}],"termid":"MOD:01223"}


id: GO:0098839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic density. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic density membrane","termid":"GO:0098839"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: GO:0015799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 1,3-propanediol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Propanediol is a sweet colorless, viscous, hygroscopic liquid used as an antifreeze and in brake fluid; it is also as a humectant in cosmetics and personal care items, although it can be absorbed through the skin with harmful effects.","definition_xrefs":["PMID:24002752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"propane 1,3-diol transport","synonyms":[{"name":"1,3-propanediol transport","type":"exact"}],"termid":"GO:0015799"}


id: GO:0090448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in).","definition_xrefs":["PMID:22864417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"glucosinolate transmembrane transporter activity","termid":"GO:0141165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glucosinolate:proton symporter activity","synonyms":[{"name":"glucosinolate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0090448"}


id: GO:0018188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-proline to form trans-2,3-cis-3,4-dihydroxy-L-proline.","definition_xrefs":["RESID:AA0282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline hydroxylation","termid":"GO:0019511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline di-hydroxylation","termid":"GO:0018188"}


id: GO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to non-antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to non-antigenic stimulus","type":"exact"}],"termid":"GO:0002879"}


id: PBO:0081566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 491","termid":"PBO:0081566"}


id: PBO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 121","termid":"PBO:0044833"}


id: MONDO:0021520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the mouth floor.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"neoplasm of floor of mouth","termid":"MONDO:0021383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of floor of mouth","secondary_identifiers":["MEDGEN:102295","SCTID:92109005","UMLS:C0153934","NCIT:C3593","ICD10CM:D10.2","ICD9:210.3","icd11.foundation:1774137950"],"synonyms":[{"name":"benign floor of mouth neoplasm","type":"exact"},{"name":"benign floor of mouth tumor","type":"exact"},{"name":"benign floor of mouth tumour","type":"exact"},{"name":"benign floor of the mouth neoplasm","type":"exact"},{"name":"benign floor of the mouth tumor","type":"exact"},{"name":"benign floor of the mouth tumour","type":"exact"},{"name":"benign neoplasm of the floor of the mouth","type":"exact"},{"name":"benign tumor of floor of mouth","type":"exact"},{"name":"benign tumor of the floor of the mouth","type":"exact"},{"name":"benign tumour of floor of mouth","type":"exact"},{"name":"benign tumour of the floor of the mouth","type":"exact"},{"name":"mouth floor benign neoplasm","type":"exact"}],"termid":"MONDO:0021520","xrefs":{"Monarch":{"xref_id":"0021520"}}}


id: MONDO:1012504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, goat","secondary_identifiers":["OMIA:002053-9925"],"termid":"MONDO:1012504","xrefs":{"Monarch":{"xref_id":"1012504"}}}


id: PBO:0065673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRT antisense RNA 1","termid":"PBO:0065673"}


id: MONDO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuropathy, hereditary sensorimotor, with upper motor neuron, visual pathway and autonomic disturbance (obsolete MONDO:0008085)","secondary_identifiers":["MESH:C563517","OMIM:162380"],"synonyms":[{"name":"neuropathy, hereditary sensorimotor, with upper motor neuron, visual pathway and autonomic disturbance","type":"exact"}],"termid":"MONDO:0008085","xrefs":{"Monarch":{"xref_id":"0008085"}}}


id: PBO:0054379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1775","termid":"PBO:0054379"}


id: MONDO:0008368
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86888],"is_not":false,"summary":null,"term":"MONDO:0008368"}]},"cv_name":"mondo","definition":"Autosomal dominant distal renal tubular acidosis (AD dRTA) is an inherited form of distal renal tubular acidosis (dRTA) characterized by hyperchloremic metabolic acidosis often but not always associated with hypokalemia.","definition_xrefs":["Orphanet:93608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"distal renal tubular acidosis","termid":"MONDO:0015827"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant distal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4668","OMIM:179800"],"synonyms":[{"name":"AD dRTA","type":"exact"},{"name":"RTA, classic type","type":"related"},{"name":"RTA, distal type, autosomal dominant","type":"related"},{"name":"RTA, gradient type","type":"related"},{"name":"autosomal dominant SLC4A1-associated distal renal tubular acidosis","type":"related"},{"name":"autosomal dominant distal renal tubular acidosis (disease)","type":"exact"},{"name":"distal renal tubular acidosis (disease), autosomal dominant","type":"exact"},{"name":"distal renal tubular acidosis 1","type":"exact"},{"name":"renal tubular acidosis 1","type":"related"},{"name":"renal tubular acidosis, distal, autosomal dominant","type":"related"}],"termid":"MONDO:0008368","terms_by_termid":{"MONDO:0008368":null},"xrefs":{"Monarch":{"xref_id":"0008368"}}}


id: PBO:0028799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest","termid":"PBO:0028799"}


id: PBO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member F, pseudogene","termid":"PBO:0046899"}


id: PBO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli rusA and ruvC","termid":"PBO:0017769"}


id: PBO:0062687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 8 pseudogene","termid":"PBO:0062687"}


id: MOD:00155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4'-dihydroxyphenylalanine.","definition_xrefs":["ChEBI:141815","DeltaMass:0","OMSSA:194","Unimod:35#Y","OMSSA:64","PubMed:1610822","PubMed:3734192","PubMed:1903612","RESID:AA0146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4'-dihydroxyphenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(3,4-dihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4-Dihydroxy-Phenylalanine (from Tyrosine) (DOPA)","type":"exact"},{"name":"3HyTyr","type":"exact"},{"name":"L-3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"L-3'-hydroxytyrosine","type":"exact"},{"name":"L-DOPA","type":"exact"},{"name":"MOD_RES 3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"hydroxylationy","type":"exact"},{"name":"levodopa","type":"exact"},{"name":"mod194","type":"exact"}],"termid":"MOD:00155"}


id: MONDO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient bilateral swelling of breast tissue in a neonate that results from the waning influence of maternal estrogen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gynecomastia disorder","termid":"MONDO:0001571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infant gynecomastia","secondary_identifiers":["UMLS:C1449721","ICD10CM:P83.4","ICD9:778.7","SCTID:34831003","DOID:11603","MEDGEN:258541"],"synonyms":[{"name":"breast engorgement in newborn","type":"exact"},{"name":"neonatal gynaecomastia","type":"exact"}],"termid":"MONDO:0001323","xrefs":{"Monarch":{"xref_id":"0001323"}}}


id: PBO:0089970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-phosphoerythronate phosphastase/2-phosphoglycolate phophatase, involved in detoxification of glycolytic by-products","termid":"PBO:0089970"}


id: PBO:0039730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C1 pseudogene 1","termid":"PBO:0039730"}


id: GO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine in mRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine in mRNA.","definition_xrefs":["PMID:29072297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mRNA (adenine-N1-)-methyltransferase activity","termid":"GO:0061953"}


id: MONDO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-obesity-brain malformations-facial dysmorphism syndrome is a rare, syndromic intellectual disability primarily characterized by moderate to severe intellectual disability, true-to-relative microcephaly and brain abnormalities including a thin corpus callosum, cerebellar hypoplasia, cerebral white matter hypoplasia and multi-focal hyperintensity of cerebral white matter on MRI. Obesity and distinctive craniofacial dysmorphism (including brachycephaly, round face, straight eyebrows, synophrys, hypertelorism, epicanthus, wide and depressed nasal bridge, protruding ears with uplifted lobe, downslanting corners of the mouth) are additional features.","definition_xrefs":["Orphanet:352530"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","secondary_identifiers":["GARD:21521","MEDGEN:1644787","UMLS:C4706414"],"synonyms":[{"name":"autosomal recessive intellectual disability due to TRAPPC9 deficiency","type":"exact"},{"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018123","xrefs":{"Monarch":{"xref_id":"0018123"}}}


id: MONDO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the vulva and is composed of glandular epithelial cells. Representative examples include adenoma of the minor vestibular glands, Bartholin gland adenoma, and Bartholin gland adenocarcinoma.","definition_xrefs":["NCIT:C40292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar glandular neoplasm","secondary_identifiers":["UMLS:C1520082","MEDGEN:276991","DOID:2076"],"synonyms":[{"name":"mammalian vulva glandular cell neoplasm","type":"exact"},{"name":"vulvar glandular neoplasm","type":"exact"},{"name":"vulvar glandular tumor","type":"exact"},{"name":"vulvar glandular tumour","type":"exact"}],"termid":"MONDO:0002198","xrefs":{"Monarch":{"xref_id":"0002198"}}}


id: GO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type VI secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VI secretion system (obsolete GO:0044049)","termid":"GO:0044049"}


id: GO:0090014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaflet formation","termid":"GO:0090014"}


id: PBO:0083265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 69% of ORF overlaps the uncharacterized ORF YKL075C","termid":"PBO:0083265"}


id: GO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by mitosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051329"}],"interesting_parent_ids":["GO:0008150","GO:0051329"],"is_obsolete":false,"name":"mitotic G1 phase","secondary_identifiers":["Reactome:R-HSA-69236"],"synonyms":[{"name":"G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000080"}


id: MONDO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation or presence of a blood clot (thrombus) in the lateral sinuses. This condition is often associated with ear infections (otitis media or mastoiditis) without antibiotic treatment. In developed nations, lateral sinus thrombosis can result from craniocerebral trauma; brain neoplasms; neurosurgical procedures; thrombophilia; and other conditions. Clinical features include headache; vertigo; and increased intracranial pressure.","definition_xrefs":["MESH:D020227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial sinus thrombosis","termid":"MONDO:0002692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral sinus thrombosis","secondary_identifiers":["MEDGEN:124359","UMLS:C0270639","DOID:3574","SCTID:192761004"],"synonyms":[{"name":"thrombosis of lateral venous sinus","type":"exact"},{"name":"thrombosis transverse sinus","type":"exact"}],"termid":"MONDO:0002693","xrefs":{"Monarch":{"xref_id":"0002693"}}}


id: GO:0021972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after decussation through the spinal cord in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through spinal cord","synonyms":[{"name":"corticospinal neuron axon pathfinding through spinal cord","type":"exact"}],"termid":"GO:0021972"}


id: PBO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 9","termid":"PBO:0071814"}


id: GO:0009448
data:
  {"annotated_genes":["SJAG_03293","SJAG_00674","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57130],"is_not":false,"summary":null,"term":"GO:0009448"},{"annotations":[89300,90292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"4-aminobutanoate metabolic process","type":"exact"},{"name":"4-aminobutanoate metabolism","type":"exact"},{"name":"4-aminobutyrate metabolic process","type":"exact"},{"name":"4-aminobutyrate metabolism","type":"exact"},{"name":"GABA metabolic process","type":"exact"},{"name":"GABA metabolism","type":"exact"},{"name":"gamma-aminobutyric acid metabolism","type":"exact"}],"termid":"GO:0009448","terms_by_termid":{"GO:0009448":null,"GO:0009450":null}}


id: MONDO:0971131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral diffuse uveal melanocytic proliferation disease","secondary_identifiers":["MEDGEN:1863858","UMLS:C5925078","Orphanet:674968"],"termid":"MONDO:0971131","xrefs":{"Monarch":{"xref_id":"0971131"}}}


id: GO:0004722
data:
  {"annotated_genes":["SJAG_00600","SJAG_03310","SJAG_02203","SJAG_04426","SJAG_02854","SJAG_01187","SJAG_03482","SJAG_03631","SJAG_01286","SJAG_02433","SJAG_01672","SJAG_00823","SJAG_02536","SJAG_03185","SJAG_03893","SJAG_01790","SJAG_02389","SJAG_01906","SJAG_03624","SJAG_00082","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62528,64624,74594,74705,74729,75304,75885,75921,76377,76654,81060,81310],"is_not":false,"summary":null,"term":"GO:0004722"},{"annotations":[77932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[81351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[119110,97887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[68671,81646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[97751,99113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[113972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01672":null,"SJAG_01790":null,"SJAG_01906":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02854":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03310":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03893":null,"SJAG_04426":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0004721","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0106307","Reactome:R-HSA-5694421","Reactome:R-HSA-199959","Reactome:R-HSA-9619430","Reactome:R-HSA-9686524","Reactome:R-HSA-9865226","GO:0000163","Reactome:R-HSA-3601585","GO:0015071","Reactome:R-HSA-5672957","Reactome:R-HSA-5675433","Reactome:R-HSA-5692754","Reactome:R-HSA-5693153","Reactome:R-HSA-9831948","Reactome:R-HSA-5679206","GO:0030361","Reactome:R-HSA-4088141","Reactome:R-HSA-8948139","GO:0004724","Reactome:R-HSA-1295632","GO:0030357","Reactome:R-HSA-6811504","Reactome:R-HSA-9912527","Reactome:R-HSA-9853385","Reactome:R-HSA-9619467","MetaCyc:3.1.3.16-RXN","GO:0030360","Reactome:R-HSA-5672961","Reactome:R-HSA-1638821","Reactome:R-HSA-9619449","Reactome:R-HSA-9660538","Reactome:R-HSA-163568","GO:0008600","Reactome:R-HSA-163689","Reactome:R-HSA-163750","GO:0000158","GO:0008598","GO:0030358","Reactome:R-HSA-2187401","Reactome:R-HSA-5675431","Reactome:R-HSA-9658445","Reactome:R-HSA-5683405","Reactome:R-HSA-6792863","Reactome:R-HSA-9865238","Reactome:R-HSA-201787","Reactome:R-HSA-74948","Reactome:R-HSA-199425","Reactome:R-HSA-209055","Reactome:R-HSA-201790","Reactome:R-HSA-9861725","EC:3.1.3.16","Reactome:R-HSA-2995388","GO:0106306","Reactome:R-HSA-429730","Reactome:R-HSA-3002811","Reactome:R-HSA-4419948","Reactome:R-HSA-5687758","Reactome:R-HSA-9660536","Reactome:R-HSA-380949"],"synonyms":[{"name":"magnesium-dependent protein serine/threonine phosphatase activity","type":"related"},{"name":"phosphatase I","type":"narrow"},{"name":"phosphatase II","type":"narrow"},{"name":"phosphatase III","type":"narrow"},{"name":"protein phosphatase type 1 activity","type":"narrow"},{"name":"protein phosphatase type 2A activity","type":"narrow"},{"name":"protein phosphatase type 2B activity","type":"narrow"},{"name":"protein phosphatase type 2C activity","type":"narrow"},{"name":"protein phosphatase-1","type":"narrow"},{"name":"protein phosphatase-2A","type":"narrow"},{"name":"protein phosphatase-2B","type":"narrow"},{"name":"protein phosphatase-2C","type":"narrow"},{"name":"protein serine phosphatase activity","type":"narrow"},{"name":"protein threonine phosphatase activity","type":"narrow"},{"name":"serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:0004722","terms_by_termid":{"GO:0004722":null,"GO:0004741":null,"GO:0008420":null,"GO:0033192":null,"GO:0180005":null,"GO:0180007":null,"GO:1990439":null}}


id: PBO:0043381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 11","termid":"PBO:0043381"}


id: PBO:0079226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 4","termid":"PBO:0079226"}


id: MONDO:0009158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndromes (EDS) form a heterogeneous group of inherited connective tissue disorders characterized by variable joint hypermobility and cutaneous hyperextensibility. Type X is distinguished by platelet dysfunction associated with a fibronectin abnormality. Type X EDS has been described in only one family so far. Age of onset is about 13-25 years. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:75501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, fibronectinemic type","secondary_identifiers":["OMIM:225310","MEDGEN:346497","UMLS:C1857038","SCTID:83586000","MESH:C565600"],"synonyms":[{"name":"EDS 10","type":"related"},{"name":"EDS X","type":"exact"},{"name":"EDS10 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 10","type":"exact"},{"name":"Ehlers-Danlos syndrome type 10 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome with platelet dysfunction from fibronectin abnormality","type":"exact"},{"name":"Ehlers-Danlos syndrome, dysfibronectinemic type","type":"related"},{"name":"Ehlers-Danlos syndrome, fibronectin-deficient","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 10","type":"related"},{"name":"Ehlers-Danlos syndrome, type X (formerly)","type":"related"},{"name":"FN Abnormality","type":"related"}],"termid":"MONDO:0009158","xrefs":{"Monarch":{"xref_id":"0009158"}}}


id: SO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Watson strand is the strand whose 5'-end is on the short arm of the chromosome. Of note, the term 'plus strand' is typically based on a reference sequence where it's preferred for the plus strand to be the Watson strand, but might not be and 'plus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Watson_strand","synonyms":[{"name":"Forward strand","type":"exact"},{"name":"Plus strand","type":"broad"},{"name":"Top strand","type":"exact"},{"name":"Watson strand","type":"exact"}],"termid":"SO:0002262"}


id: GO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in zymogen activation in another organism (obsolete GO:0044543)","synonyms":[{"name":"envenomation resulting in zymogen activation in other organism","type":"exact"}],"termid":"GO:0044543"}


id: PBO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily U member 1 pseudogene","termid":"PBO:0062198"}


id: MONDO:0016019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, progressive chronic inflammation of a single cerebral hemisphere that usually affects children. It is characterized by severe seizures, loss of motor skills and speech, hemiparesis, and dementia.","definition_xrefs":["NCIT:C125384"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune epilepsy","termid":"MONDO:0100028"},{"relation_name":"is_a","term_name":"postinfectious encephalitis","termid":"MONDO:0020068"},{"relation_name":"is_a","term_name":"variable-age epilepsy syndrome with developmental and/or epileptic encephalopathy or progressive neurological deterioration","termid":"MONDO:0800495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"Rasmussen subacute encephalitis","secondary_identifiers":["NANDO:2200900","SCTID:230191005","MEDGEN:418934","NORD:1649","NANDO:1200598","MESH:C535291","NANDO:2100246","Orphanet:1929","UMLS:C2930868","GARD:18752","ICD9:323.9"],"synonyms":[{"name":"CFE","type":"exact"},{"name":"RE","type":"related"},{"name":"Rasmussen Encephalitis","type":"exact"},{"name":"Rasmussen encephalitis","type":"exact"},{"name":"Rasmussen syndrome","type":"exact"},{"name":"Rasmussen’s encephalitis","type":"exact"},{"name":"Rasmussen’s syndrome","type":"exact"},{"name":"chronic focal encephalitis","type":"exact"}],"termid":"MONDO:0016019","xrefs":{"Monarch":{"xref_id":"0016019"}}}


id: MONDO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior dislocation of lens","secondary_identifiers":["ICD9:379.34","DOID:14199","icd11.foundation:516761725","MEDGEN:509942","SCTID:14169000","UMLS:C0155373"],"termid":"MONDO:0001906","xrefs":{"Monarch":{"xref_id":"0001906"}}}


id: GO:0019086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transcription of the final group of viral genes of the viral life cycle, following middle transcription, or where middle transcription doesn't occur, following early transcription. Involves the transcription of genes encoding structural proteins.","definition_xrefs":["GOC:bf","GOC:jh2","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late viral transcription","synonyms":[{"name":"late viral mRNA transcription","type":"related"}],"termid":"GO:0019086"}


id: GO:0102702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (+)-2-carene + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:10700382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-carene synthase activity","secondary_identifiers":["MetaCyc:RXN-5122"],"termid":"GO:0102702"}


id: GO:0140610
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106889],"is_not":false,"summary":null,"term":"GO:0140610"}]},"cv_name":"molecular_function","definition":"Binding to a specific RNA molecule to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:23334420","PMID:29084823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"RNA sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140610","terms_by_termid":{"GO:0140610":null}}


id: GO:0061024
data:
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id: MONDO:0800130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory syndrome characterized by onset of various autoimmune features usually in the first decades of life, although later onset has been reported. Typical features include autoimmune cytopenia, hemolytic anemia, thrombocytopenia, and lymphadenopathy. More variable features may include autoimmune thyroiditis, psoriasis or eczema, nephritis, hepatitis, and symptoms of systemic lupus erythematosus (SL). Some patients may have recurrent infections or exacerbation of the disease with acute infection. Laboratory studies show variable findings, often decreased numbers of naive B cells, lymphopenia with skewed subsets, hypogammaglobulinemia, presence of autoantibodies, and a hyperinflammatory state. The disorder shows autosomal dominant inheritance with incomplete penetrance.","definition_xrefs":["OMIM:619375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome with immunodeficiency","secondary_identifiers":["UMLS:C5543547","MEDGEN:1784363"],"termid":"MONDO:0800130","xrefs":{"Monarch":{"xref_id":"0800130"}}}


id: MONDO:0018214
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"A familial epilepsy syndrome in which family members display a seizure disorder from the generalized epilepsy with febrile seizures plus spectrum which ranges from simple febrile seizures (FS) to the more severe phenotype of myoclonic-astatic epilepsy (MAE) or Dravet syndrome (DS).","definition_xrefs":["Orphanet:36387"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"hereditary generalized epilepsy","termid":"MONDO:0100576"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:699688008","OMIMPS:604233","DOID:0060170","NCIT:C122811","MEDGEN:503203","UMLS:C3502809","MESH:C565808","GARD:18641"],"synonyms":[{"name":"GEFS+","type":"exact"},{"name":"epilepsy, generalized, with febrile seizures plus","type":"exact"},{"name":"generalised epilepsy with febrile seizures-plus","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus","type":"exact"},{"name":"genetic epilepsy with febrile seizures plus","type":"exact"},{"name":"genetic epilepsy with febrile seizures-plus","type":"exact"}],"termid":"MONDO:0018214","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0018214"}}}


id: MONDO:1010901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cats due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, domestic cat","termid":"MONDO:1011571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, domestic cat","secondary_identifiers":["OMIA:001962-9685"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, domestic cat","type":"related"}],"termid":"MONDO:1010901","xrefs":{"Monarch":{"xref_id":"1010901"}}}


id: GO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a drug that has originated internally within the cell or organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endogenous drug catabolic process (obsolete GO:0042739)","synonyms":[{"name":"endogenous drug breakdown","type":"exact"},{"name":"endogenous drug catabolism","type":"exact"},{"name":"endogenous drug degradation","type":"exact"}],"termid":"GO:0042739"}


id: GO:1900648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"positively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"activation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"activation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900648"}


id: PATO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to a delayed onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postdisplaced growth","termid":"PATO:0001750"}


id: MONDO:0013093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any malignant glioma in which the cause of the disease is a mutation in the BRCA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"},{"relation_name":"is_a","term_name":"BRCA2-related cancer predisposition","termid":"MONDO:0700269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 3","secondary_identifiers":["OMIM:613029","MEDGEN:442777","UMLS:C2751641"],"synonyms":[{"name":"BRCA2 malignant glioma","type":"exact"},{"name":"GLM3","type":"related"},{"name":"glioblastoma 3","type":"exact"},{"name":"glioma susceptibility 3","type":"exact"},{"name":"glioma susceptibility type 3","type":"exact"},{"name":"malignant glioma caused by mutation in BRCA2","type":"exact"}],"termid":"MONDO:0013093","xrefs":{"Monarch":{"xref_id":"0013093"}}}


id: SO:0001324
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylguanosine","secondary_identifiers":["RNAMOD:029"],"synonyms":[{"name":"1-methylguanosine","type":"exact"},{"name":"m1G","type":"exact"},{"name":"one methylguanosine","type":"exact"}],"termid":"SO:0001324"}


id: PBO:0027819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_pyrimidine_salvage_gene_mRNA_during_vegetative_growth","termid":"PBO:0027819"}


id: PATO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000814 taste acuity value (obsolete PATO:0000814)","termid":"PATO:0000814"}


id: PBO:0116974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA1 antisense RNA 2","termid":"PBO:0116974"}


id: PBO:0068364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 146","termid":"PBO:0068364"}


id: SO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified isoleucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_isoleucine","secondary_identifiers":["MOD:00910"],"synonyms":[{"name":"ModIle","type":"exact"},{"name":"modified L isoleucine","type":"exact"},{"name":"modified L-isoleucine","type":"exact"}],"termid":"SO:0001396"}


id: GO:0050549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclohexylformamide + H+ = cyclohexyl isocyanide + H2O.","definition_xrefs":["RHEA:18197","EC:4.2.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cyclohexyl-isocyanide hydratase activity","secondary_identifiers":["MetaCyc:4.2.1.103-RXN","UM-BBD_reactionID:r1029","KEGG_REACTION:R05771"],"synonyms":[{"name":"N-cyclohexylformamide hydro-lyase (cyclohexyl-isocyanide-forming)","type":"related"},{"name":"N-cyclohexylformamide hydro-lyase activity","type":"related"},{"name":"isonitrile hydratase activity","type":"related"}],"termid":"GO:0050549"}


id: PBO:0063993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 27","termid":"PBO:0063993"}


id: PR:O74453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p21-activated protein kinase-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.08c","secondary_identifiers":["UniProtKB:O74453"],"synonyms":[{"name":"Spom972h-PAK1IP1","type":"exact"}],"termid":"PR:O74453"}


id: GO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosomal protein stabilization (obsolete GO:0017029)","synonyms":[{"name":"lysosomal protein stabilization","type":"exact"}],"termid":"GO:0017029"}


id: MONDO:0016705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angiocentric glioma (AG) is an extremely rare slow-growing glial neoplasm of the central nervous system, usually arising in a superficial location in the cerebrum, affecting all ages and both sexes, and characterized by intractable seizures and headaches, with most cases being cured by surgical incision alone and therefore having a good prognosis.","definition_xrefs":["Orphanet:251671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiocentric glioma","secondary_identifiers":["NCIT:C92552","MEDGEN:453267","GARD:20714","ICDO:9431/1","ONCOTREE:ANGL","UMLS:C2363903","DOID:0081261"],"synonyms":[{"name":"ANGL","type":"related"},{"name":"Monomorphus angiocentric glioma","type":"exact"},{"name":"angiocentric glioma (WHO grade I)","type":"exact"},{"name":"angiocentric neuroepithelial tumor","type":"exact"},{"name":"angiocentric neuroepithelial tumour","type":"exact"}],"termid":"MONDO:0016705","xrefs":{"Monarch":{"xref_id":"0016705"}}}


id: GO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phytoalexin biosynthetic process (obsolete GO:0052323)","synonyms":[{"name":"down regulation of phytoalexin biosynthesis","type":"exact"},{"name":"down-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"downregulation of phytoalexin biosynthesis","type":"exact"},{"name":"inhibition of phytoalexin biosynthesis","type":"narrow"},{"name":"negative regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052323"}


id: MONDO:0005997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or stricture of the tricuspid orifice of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve stenosis","secondary_identifiers":["NANDO:2200300","EFO:0007525","icd11.foundation:442626161","MEDGEN:21678","NCIT:C50783","SCTID:49915006","UMLS:C0040963","DOID:4078","HP:0010446","MESH:D014264"],"synonyms":[{"name":"tricuspid stenosis","type":"exact"}],"termid":"MONDO:0005997","xrefs":{"Monarch":{"xref_id":"0005997"}}}


id: MONDO:1012211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, sheep","secondary_identifiers":["OMIA:000789-9940"],"termid":"MONDO:1012211","xrefs":{"Monarch":{"xref_id":"1012211"}}}


id: PBO:0004881
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1-interacting protein 1","termid":"PBO:0004881"}


id: MONDO:0017752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"defect in V-ATPase","secondary_identifiers":["Orphanet:309778","GARD:21345","MEDGEN:1842740","UMLS:C5681038"],"termid":"MONDO:0017752","xrefs":{"Monarch":{"xref_id":"0017752"}}}


id: PBO:0108570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Las1","termid":"PBO:0108570"}


id: PBO:0056185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF transcriptional regulator RNA","termid":"PBO:0056185"}


id: MONDO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the skin. It is characterized by the presence of epithelioid endothelial cells.","definition_xrefs":["NCIT:C7393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"epithelioid hemangioma","termid":"MONDO:0021169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin epithelioid hemangioma","secondary_identifiers":["UMLS:C0002989","MEDGEN:297","SCTID:400131007","DOID:14308","MESH:D000796"],"synonyms":[{"name":"angiolymphoid cutaneous hyperplasia","type":"exact"},{"name":"angiolymphoid hyperplasia of skin","type":"exact"},{"name":"angiolymphoid hyperplasia of the skin","type":"exact"},{"name":"epithelioid hemangioma of skin","type":"exact"},{"name":"epithelioid hemangioma of the skin","type":"exact"},{"name":"histiocytoid hemangioma of skin","type":"exact"},{"name":"histiocytoid hemangioma of the skin","type":"exact"},{"name":"histiocytoid hemangioma of zone of skin","type":"exact"},{"name":"skin epithelioid hemangioma","type":"exact"},{"name":"zone of skin histiocytoid hemangioma","type":"exact"}],"termid":"MONDO:0001939","xrefs":{"Monarch":{"xref_id":"0001939"}}}


id: GO:0050535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranoside + H2O = 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranose + an alcohol.","definition_xrefs":["RHEA:24480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"beta-primeverosidase activity","secondary_identifiers":["MetaCyc:3.2.1.149-RXN","EC:3.2.1.149"],"synonyms":[{"name":"6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranoside 6-O-(beta-D-xylosyl)-beta-D-glucohydrolase activity","type":"related"},{"name":"b-primeverosidase activity","type":"exact"}],"termid":"GO:0050535"}


id: PBO:0060709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 6","termid":"PBO:0060709"}


id: PBO:0040260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 13","termid":"PBO:0040260"}


id: PBO:0038621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER2 pseudogene 1","termid":"PBO:0038621"}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_04464","SJAG_00244","SJAG_00514","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[73202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[117071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[91753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: PBO:0086937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles","termid":"PBO:0086937"}


id: FYPO:0000096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cadmium. Cells stop growing (and may die) at a concentration of cadmium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cadmium","synonyms":[{"name":"hypersensitive to cadmium","type":"exact"},{"name":"sensitive to cadmium during mitotic cell cycle","type":"related"},{"name":"sensitive to cadmium during vegetative growth","type":"exact"},{"name":"sensitive to cadmium ions","type":"exact"}],"termid":"FYPO:0000096"}


id: PBO:0034121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_interology_relationship_with","termid":"PBO:0034121"}


id: GO:0006619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The targeting of proteins to a membrane that occurs during translation and is independent of SRP and signal recognition.","definition_xrefs":["PMID:11101515","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete SRP-independent cotranslational protein-membrane targeting (obsolete GO:0006619)","synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-independent cotranslational membrane targeting","type":"exact"},{"name":"SRP-independent cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006619"}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: PBO:0084319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; involved in nuclear import and export of proteins, including import of replication protein A and export of Far1p and transcription factors Swi5p, Swi6p, Msn2p, and Pho4p; required for re-export of mature tRNAs after their retrograde import from the cytoplasm; exportin-5 homolog","termid":"PBO:0084319"}


id: PBO:0111888
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT hook protein","termid":"PBO:0111888"}


id: MONDO:0017387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant neoplasm of uncertain differentiation, characterized by the presence of epithelioid cells forming nodular patterns. The nodules often undergo central necrosis, resulting in a pseudogranulomatous growth pattern. It usually occurs in young adults. The most common sites of involvement are the extremities (distal-type epithelioid sarcoma), and less frequently the pelvis, perineum, and genital organs (proximal-type epithelioid sarcoma).","definition_xrefs":["NCIT:C3714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid sarcoma","secondary_identifiers":["DOID:6193","ICDO:8804/3","Orphanet:293202","MedDRA:10015099","ONCOTREE:EPIS","GARD:10181","MEDGEN:104753","UMLS:C0205944"],"synonyms":[{"name":"ES","type":"exact"},{"name":"epithelioid cell sarcoma","type":"exact"},{"name":"epithelioid sarcoma","type":"exact"}],"termid":"MONDO:0017387","xrefs":{"Monarch":{"xref_id":"0017387"}}}


id: GO:0005310
data:
  {"annotated_genes":["SJAG_00275","SJAG_00671","SJAG_02140","SJAG_00522","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114273,98487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[98488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"},{"annotations":[90286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[68909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[103603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[103604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[90287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[103606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dicarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005312","GO:0015365","Reactome:R-HSA-1614546","Reactome:R-HSA-372843"],"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"},{"name":"dicarboxylate carrier","type":"narrow"},{"name":"dicarboxylic acid permease activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005310","terms_by_termid":{"GO:0000515":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015366":null,"GO:0034658":null,"GO:0097434":null,"GO:1901239":null}}


id: _global:functionally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","secondary_identifiers":["RO:0002328"],"termid":"_global:functionally_related_to"}


id: PBO:0063990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 24","termid":"PBO:0063990"}


id: PBO:0090134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4196 and DUF4211, human CCDC82 ortholog","termid":"PBO:0090134"}


id: MONDO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular nystagmus (obsolete MONDO:0001872)","secondary_identifiers":["DOID:14070","ICD9:379.54","SCTID:46888001"],"synonyms":[{"name":"Nystagmus associated with disorder of the vestibular system","type":"exact"},{"name":"obsolete vestibular nystagmus (disease)","type":"exact"},{"name":"vestibular nystagmus","type":"exact"}],"termid":"MONDO:0001872","xrefs":{"Monarch":{"xref_id":"0001872"}}}


id: PBO:0002995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-galactosidase, melibiase","termid":"PBO:0002995"}


id: GO:0035574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from lysine at position 20 of the histone.","definition_xrefs":["GOC:sp","PMID:20622853"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 demethylation (obsolete GO:0035574)","termid":"GO:0035574"}


id: MONDO:0025956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ovarian remnant syndrome (ORS) is characterized by the presence of residual ovarian tissue after a woman has had surgery to remove one ovary or both ovaries (oophorectomy). Signs and symptoms may include pelvic pain, a pelvic mass, or the absence of menopause after oophorectomy. The condition may be caused by surgical factors leading to incomplete removal of ovarian tissue, including factors that limit surgical exposure of the ovary or compromise surgical technique. Factors may include pelvic adhesions (limiting ability to see the ovary or causing it to adhere to other tissues); anatomic variations; bleeding during surgery; or poor surgical technique. Treatment is indicated for people with symptoms and typically involves surgery to remove the residual tissue. Therapy for those who refuse surgery, cannot have surgery, or do not have a pelvic mass may include hormonal therapy to suppress ovarian function.","definition_xrefs":["GARD:0007297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian remnant syndrome","secondary_identifiers":["UMLS:C5886744","icd11.foundation:584962583","MEDGEN:1856973"],"termid":"MONDO:0025956","xrefs":{"Monarch":{"xref_id":"0025956"}}}


id: GO:0032355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["ISBN:0911910123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estradiol","synonyms":[{"name":"response to E2 stimulus","type":"exact"},{"name":"response to estradiol stimulus","type":"exact"}],"termid":"GO:0032355"}


id: PBO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 3","termid":"PBO:0043977"}


id: GO:0106212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres dissociate from the spindle pole body, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromere detachment from spindle pole body involved in meiotic chromosome organization","synonyms":[{"name":"centromere detachment from SPB involved in meiotic chromosome organization","type":"exact"},{"name":"centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106212"}


id: PBO:0040383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 1 like (pseudogene)","termid":"PBO:0040383"}


id: PBO:0041350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 86, pseudogene","termid":"PBO:0041350"}


id: PBO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_recombination","termid":"PBO:0031728"}


id: PR:Q10201
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- npg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.07c","synonyms":[{"name":"Spom972h-npg1","type":"exact"}],"termid":"PR:Q10201"}


id: PBO:0087743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087743"}


id: MONDO:0700065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal abnormality consisting of the presence of one chromosome in addition to the normal diploid number.","definition_xrefs":["NCIT:C3421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy","secondary_identifiers":["MEDGEN:21702","MESH:D014314","UMLS:C0041107"],"synonyms":[{"name":"chromosomal triplication","type":"related"}],"termid":"MONDO:0700065","xrefs":{"Monarch":{"xref_id":"0700065"}}}


id: GO:0061952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the midbody, the cytoplasmic bridge that connects the two prospective daughter cells, is severed at the end of mitotic cytokinesis, resulting in two separate daughter cells.","definition_xrefs":["PMID:29903934","PMID:12737809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"midbody abscission","synonyms":[{"name":"cell separation during cytokinesis","type":"exact"},{"name":"cytokinetic abscission","type":"exact"}],"termid":"GO:0061952"}


id: GO:1990949
data:
  {"annotated_genes":["SJAG_00666","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100616,102075],"is_not":false,"summary":null,"term":"GO:1990949"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis I.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_01515":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"first meiotic metaphase/anaphase transition","type":"related"},{"name":"meiosis I metaphase/anaphase transition","type":"exact"}],"termid":"GO:1990949","terms_by_termid":{"GO:1990949":null}}


id: PBO:0031138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_actomyosin_contractile_ring","termid":"PBO:0031138"}


id: PBO:0068304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 8","termid":"PBO:0068304"}


id: MONDO:0011069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical ribs, Sprengel anomaly, anal atresia, and urethral obstruction","secondary_identifiers":["MESH:C538072","MEDGEN:318617","OMIM:601389","UMLS:C1832391"],"synonyms":[{"name":"Frydman Cohen Ashkenazi syndrome","type":"related"},{"name":"cervical ribs, Sprengel anomaly, anal atresia, and urethral obstruction","type":"exact"},{"name":"cervical ribs, Sprengel anomaly, preaxial polydactyly, anal atresia, and urethral obstruction","type":"related"}],"termid":"MONDO:0011069","xrefs":{"Monarch":{"xref_id":"0011069"}}}


id: PBO:0085887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in maintenance of proper telomere length; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; forms nuclear foci upon DNA replication stress","termid":"PBO:0085887"}


id: MONDO:0014957
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89052],"is_not":false,"summary":null,"term":"MONDO:0014957"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"language delay and attention deficit-hyperactivity disorder/cognitive impairment with or without cardiac arrhythmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310678","MEDGEN:934645","OMIM:617182"],"synonyms":[{"name":"LADCI","type":"exact"},{"name":"language delay and ADHD/cognitive impairment with or without cardiac arrhythmia","type":"exact"},{"name":"language delay and attention Deficit-hyperactivity disorder/cognitive impairment with or without Cardiac arrhythmia","type":"exact"},{"name":"language delay and attention deficit-hyperactivity disorder/cognitive impairment with or without cardiac arrhythmia; LADCI","type":"exact"}],"termid":"MONDO:0014957","terms_by_termid":{"MONDO:0014957":null},"xrefs":{"Monarch":{"xref_id":"0014957"}}}


id: SO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_variant","termid":"SO:0001622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"5'UTR variant","type":"exact"},{"name":"5PRIME_UTR","type":"exact"},{"name":"ANNOVAR:UTR5","type":"related"},{"name":"Jannovar:5_prime_utr_variant","type":"exact"},{"name":"Seattleseq:5-prime-UTR","type":"exact"},{"name":"VAAST:5_prime_UTR_variant","type":"exact"},{"name":"VAAST:five_prime_UTR_variant","type":"exact"},{"name":"VEP:5_prime_UTR_variant","type":"exact"},{"name":"five prime UTR variant","type":"exact"},{"name":"snpEff:UTR_5_PRIME","type":"exact"},{"name":"untranslated-5","type":"exact"}],"termid":"SO:0001623"}


id: PBO:0053316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 32","termid":"PBO:0053316"}


id: GO:1902383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 11-oxo-beta-amyrin.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"11-oxo-beta-amyrin metabolic process","termid":"GO:1902381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"11-oxo-beta-amyrin biosynthetic process","synonyms":[{"name":"11-oxo-beta-amyrin anabolism","type":"exact"},{"name":"11-oxo-beta-amyrin biosynthesis","type":"exact"},{"name":"11-oxo-beta-amyrin formation","type":"exact"},{"name":"11-oxo-beta-amyrin synthesis","type":"exact"}],"termid":"GO:1902383"}


id: PBO:0092001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pc","termid":"PBO:0092001"}


id: PBO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 6","termid":"PBO:0048006"}


id: GO:0070678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a preprotein, the unprocessed form of a protein destined to undergo co- or post-translational processing.","definition_xrefs":["PMID:12914940","GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"preprotein binding","synonyms":[{"name":"unprocessed protein binding","type":"exact"}],"termid":"GO:0070678"}


id: PBO:0086784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086784"}


id: PBO:0056678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2C","termid":"PBO:0056678"}


id: GO:2000914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"positively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of galactoglucomannan catabolic process","synonyms":[{"name":"positive regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000914"}


id: PBO:0052866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-9","termid":"PBO:0052866"}


id: GO:0047278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin-glucuronoside = bilirubin + bilirubin-bisglucuronoside.","definition_xrefs":["RHEA:16885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"bilirubin-glucuronoside glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00062"],"synonyms":[{"name":"bilirubin glucuronoside glucuronosyltransferase activity","type":"exact"},{"name":"bilirubin monoglucuronide transglucuronidase activity","type":"exact"},{"name":"bilirubin-glucuronoside:bilirubin-glucuronoside D-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0047278"}


id: GO:0034483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + sulfated heparan sulfate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}


id: SO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is skipped during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_translational_frameshift","synonyms":[{"name":"plus 1 ribosomal frameshift","type":"exact"},{"name":"plus 1 translational frameshift","type":"exact"}],"termid":"SO:0001211"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: PBO:0043816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 7","termid":"PBO:0043816"}


id: GO:1901986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ketamine stimulus.","definition_xrefs":["PMID:11251190","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ketamine","termid":"GO:1901986"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117608],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: GO:1903603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thermospermine.","definition_xrefs":["GOC:TermGenie","PMID:24906355","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"thermospermine metabolic process","termid":"GO:1903601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine biosynthetic process","synonyms":[{"name":"thermospermine anabolism","type":"exact"},{"name":"thermospermine biosynthesis","type":"exact"},{"name":"thermospermine formation","type":"exact"},{"name":"thermospermine synthesis","type":"exact"}],"termid":"GO:1903603"}


id: MONDO:0100143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection that involves respiratory failure, septic shock, and/or multiple organ dysfunction.","gene_count":0,"genotype_count":0,"name":"obsolete critical COVID-19 infection (obsolete MONDO:0100143)","secondary_identifiers":["DOID:0081012"],"termid":"MONDO:0100143","xrefs":{"Monarch":{"xref_id":"0100143"}}}


id: PBO:0058339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4713","termid":"PBO:0058339"}


id: PBO:0039372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 like pseudogene 1","termid":"PBO:0039372"}


id: GO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-7 activity (obsolete GO:0004210)","synonyms":[{"name":"caspase-7 activity","type":"exact"}],"termid":"GO:0004210"}


id: PBO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member D, pseudogene","termid":"PBO:0047188"}


id: GO:0033310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of chlorophyll a.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll catabolic process","termid":"GO:0015996"},{"relation_name":"is_a","term_name":"chlorophyll a metabolic process","termid":"GO:0033304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a catabolic process","secondary_identifiers":["MetaCyc:PWY-5098"],"synonyms":[{"name":"chlorophyll a breakdown","type":"exact"},{"name":"chlorophyll a catabolism","type":"exact"},{"name":"chlorophyll a degradation","type":"exact"}],"termid":"GO:0033310"}


id: PBO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutral sphingomyelinase activation associated factor","termid":"PBO:0061528"}


id: PBO:0069506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 774, pseudogene","termid":"PBO:0069506"}


id: GO:0042910
data:
  {"annotated_genes":["SJAG_03363","SJAG_05213","SJAG_03951","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58766,64772],"is_not":false,"summary":null,"term":"GO:0042910"},{"annotations":[97988,119986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:go_curators","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"xenobiotic transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015238","GO:0015239","GO:0015559","GO:0015564","GO:0090484","Reactome:R-HSA-5625574","Reactome:R-HSA-597628"],"synonyms":[{"name":"drug transmembrane transporter activity","type":"related"},{"name":"drug transporter activity","type":"related"},{"name":"multidrug efflux pump activity","type":"related"},{"name":"multidrug transporter activity","type":"related"},{"name":"multidrug, alkane resistant pump activity","type":"related"},{"name":"xenobiotic transporter activity","type":"related"}],"termid":"GO:0042910","terms_by_termid":{"GO:0008559":null,"GO:0042910":null}}


id: PBO:0063261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 7","termid":"PBO:0063261"}


id: PBO:0069332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 591, pseudogene","termid":"PBO:0069332"}


id: GO:1900629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanophenazine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanophenazine metabolic process","synonyms":[{"name":"methanophenazine metabolism","type":"exact"}],"termid":"GO:1900629"}


id: PBO:0090554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase complex subunit","termid":"PBO:0090554"}


id: MONDO:0007407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed cryoglobulinemia (MC) is a rare multisystem disease characterized by the presence of circulating cryoprecipitable immune complexes in the serum, manifested clinically by a classical triad of purpura, weakness and arthralgia.","definition_xrefs":["Orphanet:91138"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryoglobulinemic vasculitis","secondary_identifiers":["ICD9:273.2","GARD:6386","MESH:C565141","icd11.foundation:55133785","ICD10CM:D89.1","MEDGEN:343814","UMLS:C1852456","MedDRA:10027756","NORD:1452","OMIM:123550","SCTID:190815001"],"synonyms":[{"name":"MC","type":"exact"},{"name":"Meltzer syndrome","type":"related"},{"name":"Mixed Cryoglobulinemia","type":"exact"},{"name":"cryoglobulinemia, familial mixed","type":"related"},{"name":"essential cryoglobulinemia","type":"exact"},{"name":"essential mixed cryoglobulinemia","type":"exact"},{"name":"familial mixed cryoglobulinemia","type":"related"},{"name":"mixed cryoglobulinemia","type":"exact"},{"name":"primary cryoglobulinemia","type":"exact"}],"termid":"MONDO:0007407","xrefs":{"Monarch":{"xref_id":"0007407"}}}


id: GO:0033047
data:
  {"annotated_genes":["SJAG_02332","SJAG_04464","SJAG_00244","SJAG_00460","SJAG_00883","SJAG_01082","SJAG_01805","SJAG_03353","SJAG_04999","SJAG_04126","SJAG_03126","SJAG_05290","SJAG_02169","SJAG_02451","SJAG_02336","SJAG_01297","SJAG_04259","SJAG_01679","SJAG_03681","SJAG_03048","SJAG_04280","SJAG_01330","SJAG_01837","SJAG_04699","SJAG_00082","SJAG_04884","SJAG_04140","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116288,105842,113964,117922,110234,109204,115795,101518,92604],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[103743,116518,117579,111898,108289,101360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[104309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[105227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96095],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104317],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[107145,113965,118030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[118700],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[91880,104329,118703,95701,113203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[91881,96311],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902846"},{"annotations":[113438],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[113018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[117071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033047","terms_by_termid":{"GO:0007094":null,"GO:0032888":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:2000816":null}}


id: GO:0046979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP2 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TAP2 binding","termid":"GO:0046979"}


id: PBO:0067934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 236","termid":"PBO:0067934"}


id: PBO:0083112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA photolyase involved in photoreactivation; repairs pyrimidine dimers in the presence of visible light; induced by DNA damage; regulated by transcriptional repressor Rph1p","termid":"PBO:0083112"}


id: PBO:0003404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 1 (predicted)","termid":"PBO:0003404"}


id: PBO:0109598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transvar_coordinates","termid":"PBO:0109598"}


id: MONDO:1012253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic paresis, non-human animal","termid":"MONDO:1011859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paresis, cattle","secondary_identifiers":["OMIA:000928-9913"],"termid":"MONDO:1012253","xrefs":{"Monarch":{"xref_id":"1012253"}}}


id: GO:0140943
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119047],"is_not":false,"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl(20)-[histone H4] + 3 S-adenosyl-L-methionine = 3 H+ + N(6),N(6),N(6)-trimethyl-L-lysyl(20)-[histone H4] + 3 S-adenosyl-L-homocysteine. This reaction is the addition of three methyl groups to the lysine residue at position 20 of the histone H4 protein, producing histone H4K20me3.","definition_xrefs":["RHEA:64456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0140096","GO:0008276","GO:0003824"],"is_obsolete":false,"name":"histone H4K20 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.372"],"synonyms":[{"name":"histone H4K20 trimethylase activity","type":"exact"},{"name":"histone H4K20 trimethylation","type":"exact"},{"name":"histone lysine N-trimethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140943","terms_by_termid":{"GO:0140943":null}}


id: PR:O75011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CaM kinase-like vesicle-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase nak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.02","secondary_identifiers":["UniProtKB:O75011"],"synonyms":[{"name":"N-rich kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CAMKV","type":"exact"}],"termid":"PR:O75011"}


id: GO:0030522
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a receptor located within a cell.","definition_xrefs":["GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intracellular receptor signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9024446"],"synonyms":[{"name":"intracellular receptor mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0030522","terms_by_termid":{"GO:0009785":null}}


id: PBO:0108515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor, Clr6 and Rpd3L histone deacetylase subunit Pst3","termid":"PBO:0108515"}


id: MONDO:1010060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pheochromocytoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma, non-human animal","secondary_identifiers":["OMIA:001268"],"termid":"MONDO:1010060","xrefs":{"Monarch":{"xref_id":"1010060"}}}


id: PBO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 28","termid":"PBO:0072097"}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: GO:0016170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-15 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-15 receptor binding","synonyms":[{"name":"IL-15","type":"narrow"},{"name":"interleukin-15 receptor ligand","type":"narrow"}],"termid":"GO:0016170"}


id: GO:1905773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 8-hydroxy-2'-deoxyguanosine an oxidized purine residue found in damaged DNA.","definition_xrefs":["GO_REF:0000067","GOC:nc","GOC:TermGenie","GOC:BHF","PMID:19734539","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized purine DNA binding","termid":"GO:0032357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"8-hydroxy-2'-deoxyguanosine DNA binding","termid":"GO:1905773"}


id: PBO:0052621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRR1 pseudogene 1","termid":"PBO:0052621"}


id: GO:0090412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process (obsolete GO:0090412)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0090412"}


id: SO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the enhancer region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_binding_site","synonyms":[{"name":"enhancer binding site","type":"related"}],"termid":"SO:0001461"}


id: PBO:0062540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 9","termid":"PBO:0062540"}


id: MONDO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The excessive use of marijuana with associated psychological symptoms and impairment in social or occupational functioning.","definition_xrefs":["EFO:0004218"],"gene_count":0,"genotype_count":0,"name":"obsolete marijuana dependence (obsolete MONDO:0005353)","termid":"MONDO:0005353","xrefs":{"Monarch":{"xref_id":"0005353"}}}


id: PBO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAlv9 family protein, involved in post Golgi transport (predicted)","termid":"PBO:0001590"}


id: PR:Q09763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gef1 gene.","definition_xrefs":["UniProtKB:Q09763","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.09","synonyms":[{"name":"Spom972h-gef1","type":"exact"}],"termid":"PR:Q09763"}


id: PBO:0074200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 10","termid":"PBO:0074200"}


id: PBO:0066261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 1","termid":"PBO:0066261"}


id: GO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal tubule over time, from its formation to the mature structure. In mammals, the distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule development","termid":"GO:0072017"}


id: PBO:0116588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S small subunit processome assembly factor 1","termid":"PBO:0116588"}


id: PATO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000369 unidirectional (obsolete PATO:0000369)","termid":"PATO:0000369"}


id: MONDO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphatic system disease (obsolete MONDO:0004246)","termid":"MONDO:0004246","xrefs":{"Monarch":{"xref_id":"0004246"}}}


id: GO:1904198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulation of vascular smooth muscle cell membrane depolarization.","definition_xrefs":["PMID:20826763","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"regulation of vascular associated smooth muscle cell membrane depolarization","termid":"GO:1990736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulation of vascular associated smooth muscle cell membrane depolarization","synonyms":[{"name":"down regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"down-regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"downregulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"},{"name":"inhibition of regulation of vascular smooth muscle cell membrane depolarization","type":"narrow"},{"name":"negative regulation of regulation of vascular smooth muscle cell membrane depolarization","type":"exact"}],"termid":"GO:1904198"}


id: PBO:0006769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5S rRNA (predicted)","termid":"PBO:0006769"}


id: GO:1990481
data:
  {"annotated_genes":["SJAG_00319","SJAG_04065","SJAG_02978","SJAG_00088","SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72434,74716,77422,80271,82088],"is_not":false,"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an mRNA molecule.","definition_xrefs":["PMID:25192136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mRNA pseudouridylation","type":"exact"}],"termid":"GO:1990481","terms_by_termid":{"GO:1990481":null}}


id: SO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized outside of a lipid bilayer.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"extramembrane_polypeptide_region","secondary_identifiers":["BS:00154"],"synonyms":[{"name":"extramembrane","type":"related"},{"name":"extramembrane polypeptide region","type":"exact"},{"name":"extramembrane_region","type":"related"},{"name":"topo_dom","type":"related"}],"termid":"SO:0001072"}


id: PBO:0067255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 329, pseudogene","termid":"PBO:0067255"}


id: PBO:0052594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 3","termid":"PBO:0052594"}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: PBO:0038289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon_adaptation_index","termid":"PBO:0038289"}


id: MONDO:0014740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the HOMER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 68","secondary_identifiers":["UMLS:C4225240","MEDGEN:898808","GARD:18144","OMIM:616707","DOID:0110589"],"synonyms":[{"name":"DFNA68","type":"narrow"},{"name":"HOMER2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in HOMER2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 68","type":"narrow"},{"name":"deafness, autosomal dominant 68","type":"narrow"},{"name":"deafness, autosomal dominant type 68","type":"narrow"}],"termid":"MONDO:0014740","xrefs":{"Monarch":{"xref_id":"0014740"}}}


id: PBO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0000933"}


id: MONDO:0014794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the GMNN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 6","secondary_identifiers":["GARD:16163","UMLS:C4225188","DOID:0080517","MEDGEN:905079","OMIM:616835"],"synonyms":[{"name":"GMNN Meier-Gorlin syndrome","type":"exact"},{"name":"MGORS6","type":"exact"},{"name":"Meier-GORLIN syndrome 6","type":"related"},{"name":"Meier-Gorlin syndrome 6","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in GMNN","type":"exact"},{"name":"Meier-Gorlin syndrome type 6","type":"exact"}],"termid":"MONDO:0014794","xrefs":{"Monarch":{"xref_id":"0014794"}}}


id: MONDO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corpus callosum agenesis-neuropathy is a neurodegenerative disorder characterized by severe progressive sensorimotor neuropathy beginning in infancy with resulting hypotonia, areflexia, amyotrophy and variable degrees of dysgenesis of the corpus callosum. Additional features include mild-to-severe intellectual and developmental delays, and psychiatric manifestations that include paranoid delusions, depression, hallucinations, and \\\"autistic-like\\\" features. Affected individuals are usually wheelchair restricted in the second decade of life and die in the third decade of life. The disease is inherited as an autosomal recessive trait.","definition_xrefs":["Orphanet:1496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"agenesis of the corpus callosum with peripheral neuropathy","secondary_identifiers":["MESH:C536446","OMIM:218000","UMLS:C0795950","GARD:1537","MEDGEN:162893","DOID:0060600","DOID:0090003","SCTID:702439002"],"synonyms":[{"name":"ACCPN","type":"related"},{"name":"Andermann syndrome","type":"exact"},{"name":"Charlevoix disease","type":"exact"},{"name":"HMSN/ACC","type":"related"},{"name":"agenesis of corpus callosum with neuronopathy","type":"related"},{"name":"agenesis of corpus callosum with peripheral neuropathy","type":"related"},{"name":"agenesis of corpus callosum with polyneuropathy","type":"related"},{"name":"agenesis of the corpus callosum with peripheral neuropathy","type":"exact"},{"name":"corpus callosum agenesis neuronopathy","type":"related"},{"name":"corpus callosum agenesis-neuronopathy syndrome","type":"exact"},{"name":"corpus callosum, agenesis of, with neuronopathy","type":"related"},{"name":"hereditary motor and sensory neuropathy with agenesis of the corpus callosum","type":"exact"},{"name":"peripheral neuropathy associated with agenesis of the corpus callosum","type":"exact"},{"name":"polyneuropathy, sensorimotor, with or without agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0000902","xrefs":{"Monarch":{"xref_id":"0000902"}}}


id: GO:1901294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of DNA binding that results in negative regulation of a SREBP signaling pathway.","definition_xrefs":["PMID:22017871","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by negative regulation of DNA binding (obsolete GO:1901294)","synonyms":[{"name":"inhibition of SREBP-dependent transcription by blocking DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by negative regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signalling pathway by negative regulation of DNA binding","type":"exact"}],"termid":"GO:1901294"}


id: PBO:0088945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase","termid":"PBO:0088945"}


id: PBO:0049220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK3 antisense RNA 1","termid":"PBO:0049220"}


id: GO:1903197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:16731528","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of L-dopa biosynthetic process","synonyms":[{"name":"activation of L-dopa anabolism","type":"narrow"},{"name":"activation of L-dopa biosynthesis","type":"narrow"},{"name":"activation of L-dopa biosynthetic process","type":"narrow"},{"name":"activation of L-dopa formation","type":"narrow"},{"name":"activation of L-dopa synthesis","type":"narrow"},{"name":"positive regulation of L-dopa anabolism","type":"exact"},{"name":"positive regulation of L-dopa biosynthesis","type":"exact"},{"name":"positive regulation of L-dopa formation","type":"exact"},{"name":"positive regulation of L-dopa synthesis","type":"exact"},{"name":"up regulation of L-dopa anabolism","type":"exact"},{"name":"up regulation of L-dopa biosynthesis","type":"exact"},{"name":"up regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up regulation of L-dopa formation","type":"exact"},{"name":"up regulation of L-dopa synthesis","type":"exact"},{"name":"up-regulation of L-dopa anabolism","type":"exact"},{"name":"up-regulation of L-dopa biosynthesis","type":"exact"},{"name":"up-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up-regulation of L-dopa formation","type":"exact"},{"name":"up-regulation of L-dopa synthesis","type":"exact"},{"name":"upregulation of L-dopa anabolism","type":"exact"},{"name":"upregulation of L-dopa biosynthesis","type":"exact"},{"name":"upregulation of L-dopa biosynthetic process","type":"exact"},{"name":"upregulation of L-dopa formation","type":"exact"},{"name":"upregulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903197"}


id: PBO:0066300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 2","termid":"PBO:0066300"}


id: PBO:0052427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIT proto-oncogene, receptor tyrosine kinase","termid":"PBO:0052427"}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: GO:0061992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone, and dependent on ATP hydrolysis.","definition_xrefs":["PMID:18311152"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-dependent chaperone mediated protein folding (obsolete GO:0061992)","termid":"GO:0061992"}


id: PBO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 16A","termid":"PBO:0043297"}


id: GO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030442)","synonyms":[{"name":"inactivation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030442"}


id: GO:0060127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a prolactin secreting cell. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell differentiation","synonyms":[{"name":"epsilon-acidophil differentiation","type":"exact"},{"name":"lactotrope differentiation","type":"exact"},{"name":"lactotroph differentiation","type":"exact"},{"name":"lactotropic cell differentiation","type":"exact"},{"name":"mammotrope differentiation","type":"exact"},{"name":"mammotroph differentiation","type":"exact"},{"name":"mammotrophic cell differentiation","type":"exact"},{"name":"mammotropic cell differentiation","type":"exact"}],"termid":"GO:0060127"}


id: PBO:0029818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_without_cell_division_(obsolete_FYPO:0002419)","termid":"PBO:0029818"}


id: PBO:0004699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR61","termid":"PBO:0004699"}


id: PBO:0003573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Sol1","termid":"PBO:0003573"}


id: PBO:0062815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 6","termid":"PBO:0062815"}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: PBO:0031179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe","termid":"PBO:0031179"}


id: GO:1904715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:pad","GO_REF:0000058","GOC:PARL","PMID:20176123","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated autophagy","synonyms":[{"name":"down regulation of CMA","type":"related"},{"name":"down regulation of chaperone-mediated autophagy","type":"exact"},{"name":"down-regulation of CMA","type":"related"},{"name":"down-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"downregulation of CMA","type":"related"},{"name":"downregulation of chaperone-mediated autophagy","type":"exact"},{"name":"inhibition of CMA","type":"related"},{"name":"inhibition of chaperone-mediated autophagy","type":"narrow"},{"name":"negative regulation of CMA","type":"related"}],"termid":"GO:1904715"}


id: GO:0048344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}


id: PR:O74381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.06c","synonyms":[{"name":"Spom972h-pof9","type":"exact"}],"termid":"PR:O74381"}


id: MONDO:0968986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic spinal cord lipoma characterized by the lipomatous mass extending ventrally to the dorsal root entry zone, indicating a more severe malformation of the spinal cord. The diagnosis can be suggested on imaging but usually confirmed during surgery.","definition_xrefs":["Orphanet:645285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conus spinal cord lipoma","termid":"MONDO:0958350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chaotic conus spinal cord lipoma","secondary_identifiers":["MEDGEN:1853143","UMLS:C5816729"],"termid":"MONDO:0968986","xrefs":{"Monarch":{"xref_id":"0968986"}}}


id: MONDO:0004837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing encapsulated neoplasm arising from nerves in the esophagus. Morphologically, it is characterized by the presence of fibroblasts and Schwann cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neurofibroma of the esophagus","secondary_identifiers":["UMLS:C1333463","MEDGEN:232164","DOID:961","NCIT:C5704"],"synonyms":[{"name":"esophageal neurofibroma","type":"exact"},{"name":"esophagus neurofibroma","type":"exact"},{"name":"neurofibroma of esophagus","type":"exact"},{"name":"neurofibroma of oesophagus","type":"exact"},{"name":"neurofibroma of the esophagus","type":"exact"},{"name":"oesophagus neurofibroma","type":"exact"}],"termid":"MONDO:0004837","xrefs":{"Monarch":{"xref_id":"0004837"}}}


id: GO:0061755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:BHF","PMID:20570858","GOC:bf","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circulating fibrinogen levels","termid":"GO:0061755"}


id: MONDO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 1","secondary_identifiers":["DOID:0080345","OMIM:119580","MEDGEN:1632198","UMLS:C4551988"],"synonyms":[{"name":"BCD syndrome","type":"related"},{"name":"BCDS1","type":"related"},{"name":"CDH1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"Lagophthalmia with bilateral cleft 51P and palate","type":"related"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CDH1","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"related"},{"name":"blepharocheilodontic syndrome 1","type":"exact"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"ectropion, Inferior, with cleft 51P and/Or palate","type":"related"},{"name":"elschnig syndrome","type":"related"}],"termid":"MONDO:0054740","xrefs":{"Monarch":{"xref_id":"0054740"}}}


id: MONDO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overactivity of the thyroid gland resulting in overproduction of thyroid hormone and increased metabolic rate. Causes include diffuse hyperplasia of the thyroid gland (Graves' disease), single nodule in the thyroid gland, and thyroiditis. The symptoms are related to the increased metabolic rate and include weight loss, fatigue, heat intolerance, excessive sweating, diarrhea, tachycardia, insomnia, muscle weakness, and tremor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism","secondary_identifiers":["NCIT:C3123","NANDO:2200329","EFO:0009189","MEDGEN:6972","DOID:7998","ICD9:242.90","MESH:D006980","NANDO:2100119","SCTID:34486009","UMLS:C0020550"],"synonyms":[{"name":"overactive thyroid","type":"exact"}],"termid":"MONDO:0004425","xrefs":{"Monarch":{"xref_id":"0004425"}}}


id: PBO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine DNA glycosylase Myh1","termid":"PBO:0002002"}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: MONDO:0005299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diminished or absent blood supply to the brain caused by obstruction (thrombosis or embolism) of an artery resulting in neurologic damage.","definition_xrefs":["NCIT:C78394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain ischemia","secondary_identifiers":["ICD9:348.89","DOID:2316","MEDGEN:182975","MESH:D002545","SCTID:389100007","UMLS:C0917798"],"synonyms":[{"name":"brain ischaemic disease","type":"exact"},{"name":"brain ischemia","type":"exact"},{"name":"brain ischemic disease","type":"exact"},{"name":"cerebrovascular ischemia","type":"exact"},{"name":"ischaemic disease of brain","type":"exact"},{"name":"ischaemic encephalopathy","type":"exact"},{"name":"ischemia cerebrovascular","type":"exact"},{"name":"ischemic disease of brain","type":"exact"},{"name":"ischemic encephalopathy","type":"exact"}],"termid":"MONDO:0005299","xrefs":{"Monarch":{"xref_id":"0005299"}}}


id: GO:1904698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["PMID:9788538","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"negatively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acinar cell proliferation","synonyms":[{"name":"down regulation of acinar cell proliferation","type":"exact"},{"name":"down regulation of acinic cell proliferation","type":"exact"},{"name":"down regulation of acinous cell proliferation","type":"exact"},{"name":"down-regulation of acinar cell proliferation","type":"exact"},{"name":"down-regulation of acinic cell proliferation","type":"exact"},{"name":"down-regulation of acinous cell proliferation","type":"exact"},{"name":"downregulation of acinar cell proliferation","type":"exact"},{"name":"downregulation of acinic cell proliferation","type":"exact"},{"name":"downregulation of acinous cell proliferation","type":"exact"},{"name":"inhibition of acinar cell proliferation","type":"narrow"},{"name":"inhibition of acinic cell proliferation","type":"narrow"},{"name":"inhibition of acinous cell proliferation","type":"narrow"},{"name":"negative regulation of acinic cell proliferation","type":"exact"},{"name":"negative regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904698"}


id: PBO:0109616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 16, pseudogene","termid":"PBO:0109616"}


id: MOD:01971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-ornithine.","definition_xrefs":["RESID:AA0613","ChEBI:136763","PubMed:23434852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl N2-ornithine","synonyms":[{"name":"(2S)-5-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanoic acid","type":"exact"},{"name":"(2S)-5-amino-2-[(4S)-4-amino-4-carboxybutanamido]pentanoic acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-ketovaleric acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl N2-ornithine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-ornithine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-ornithine","type":"exact"},{"name":"N2-(gamma-glutamyl)ornithine","type":"exact"},{"name":"gamma-glutamylornithine","type":"exact"}],"termid":"MOD:01971"}


id: FYPO:0008141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the second meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:16272747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiosis II","synonyms":[{"name":"decreased RNA accumulation during meiosis II","type":"related"},{"name":"decreased RNA level during second meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis II","type":"exact"},{"name":"reduced RNA level during meiosis II","type":"exact"}],"termid":"FYPO:0008141"}


id: PBO:0113072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication, suppressing early firing of multicopy rDNA origins; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0113072"}


id: MONDO:0014335
data:
  {"annotated_genes":["SJAG_04482"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88464],"is_not":false,"summary":null,"term":"MONDO:0014335"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04482":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:404437","UMLS:C4014239","MEDGEN:862676","GARD:17672","OMIM:615760"],"synonyms":[{"name":"MSCCA","type":"related"},{"name":"diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome","type":"exact"},{"name":"microcephaly, progressive, seizures, and cerebral and cerebellar atrophy","type":"exact"},{"name":"microcephaly, progressive, with seizures and cerebral and cerebellar atrophy","type":"related"}],"termid":"MONDO:0014335","terms_by_termid":{"MONDO:0014335":null},"xrefs":{"Monarch":{"xref_id":"0014335"}}}


id: PBO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane","termid":"PBO:0036127"}


id: PBO:0053467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 430","termid":"PBO:0053467"}


id: PBO:0080634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 2","termid":"PBO:0080634"}


id: GO:0010391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucomannan, a polysaccharide composed of D-glucose and D-mannose. The mannose units form the backbone structure (a linear main chain) with the D-glucose as single side-units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucomannan metabolic process","synonyms":[{"name":"glucomannan metabolism","type":"exact"}],"termid":"GO:0010391"}


id: GO:1904598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:18245812","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement involved in inflammatory response wound healing","termid":"GO:1904596"},{"relation_name":"is_a","term_name":"positive regulation of connective tissue replacement","termid":"GO:1905205"},{"relation_name":"positively_regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"activation of connective tissue replacement during inflammatory response","type":"related"},{"name":"activation of connective tissue replacement involved in inflammatory response wound healing","type":"narrow"},{"name":"activation of fibrosis during inflammatory response","type":"narrow"},{"name":"positive regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"positive regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up-regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up-regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up-regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"upregulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"upregulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"upregulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904598"}


id: MONDO:1011247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, cattle","secondary_identifiers":["OMIA:000866-9913"],"termid":"MONDO:1011247","xrefs":{"Monarch":{"xref_id":"1011247"}}}


id: PBO:0077360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 100","termid":"PBO:0077360"}


id: SOFP:chromosome
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Name of chromosome the feature occurs on(?)","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome","termid":"SOFP:chromosome"}


id: PBO:0089108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein some similarity to proteases","termid":"PBO:0089108"}


id: PBO:0053823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1087","termid":"PBO:0053823"}


id: PBO:0059908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 31","termid":"PBO:0059908"}


id: PBO:0004732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP-25 homologue, t-SNARE component Sec9","termid":"PBO:0004732"}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: PBO:0072846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 1","termid":"PBO:0072846"}


id: MONDO:0019181
data:
  {"annotated_genes":["SJAG_01412","SJAG_04616","SJAG_02058","SJAG_03909","SJAG_02422","SJAG_04022","SJAG_03471","SJAG_00786","SJAG_00845","SJAG_01269","SJAG_01047","SJAG_02878","SJAG_05326","SJAG_02238"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010659"},{"annotations":[87742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026723"},{"annotations":[87868,87867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958200"},{"annotations":[87850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975828"},{"annotations":[87148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010497"},{"annotations":[87758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0049222"},{"annotations":[88759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010447"},{"annotations":[88908,88909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010361"},{"annotations":[88744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010451"},{"annotations":[88042,88043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010313"},{"annotations":[86864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010660"}]},"cv_name":"mondo","definition":"Nonspecific X-linked intellectual deficiencies (MRX) belong to the family of sex-linked intellectual deficiencies (XLMR). In contrast to syndromic or specific X-linked intellectual deficiencies (MRXS), which also present with associated physical, neurological and/or psychiatric manifestations, intellectual deficiency is the only symptom of MRX.","definition_xrefs":["Orphanet:777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic intellectual disability","termid":"MONDO:0000509"},{"relation_name":"is_a","term_name":"X-linked intellectual disability","termid":"MONDO:0100284"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_00845":null,"SJAG_01047":null,"SJAG_01269":null,"SJAG_01412":null,"SJAG_02058":null,"SJAG_02238":null,"SJAG_02422":null,"SJAG_02878":null,"SJAG_03471":null,"SJAG_03909":null,"SJAG_04022":null,"SJAG_04616":null,"SJAG_05326":null},"genotype_count":0,"is_obsolete":false,"name":"non-syndromic X-linked intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564490","MEDGEN:502019","DOID:0050776","OMIMPS:309530","GARD:18640","UMLS:C3501611"],"synonyms":[{"name":"X-linked non-specific intellectual disability","type":"exact"},{"name":"X-linked non-syndromic intellectual disability","type":"exact"},{"name":"intellectual disability, X-linked, nonsyndromic","type":"exact"},{"name":"intellectual disability, nonsyndromic, X-linked","type":"exact"},{"name":"isolated X-linked intellectual disability","type":"related"},{"name":"mental retardation, X-linked, nonsyndromic","type":"exact"},{"name":"mental retardation, nonsyndromic, X-linked","type":"exact"},{"name":"non-specific X-linked intellectual disability","type":"exact"},{"name":"non-specific X-linked mental retardation","type":"exact"},{"name":"non-syndromic X-linked intellectual disability","type":"exact"},{"name":"non-syndromic intellectual disability, X-linked","type":"exact"},{"name":"nonsyndromic X-linked intellectual disability","type":"exact"}],"termid":"MONDO:0019181","terms_by_termid":{"MONDO:0010313":null,"MONDO:0010361":null,"MONDO:0010447":null,"MONDO:0010451":null,"MONDO:0010497":null,"MONDO:0010659":null,"MONDO:0010660":null,"MONDO:0026723":null,"MONDO:0049222":null,"MONDO:0958200":null,"MONDO:0975828":null},"xrefs":{"Monarch":{"xref_id":"0019181"}}}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: GO:0042648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing chloroplast encoded genes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid chromosome","termid":"GO:0009508"},{"relation_name":"part_of","term_name":"chloroplast nucleoid","termid":"GO:0042644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast chromosome","termid":"GO:0042648"}


id: PBO:0039774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7","termid":"PBO:0039774"}


id: GO:0061131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specific region of the gut is delineated into the area in which the pancreas will develop.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"pancreatic bud formation","termid":"GO:0061130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas field specification","termid":"GO:0061131"}


id: PBO:0069692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 971, pseudogene","termid":"PBO:0069692"}


id: PBO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 5","termid":"PBO:0048493"}


id: PBO:0067190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 252, pseudogene","termid":"PBO:0067190"}


id: PBO:0024843
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"West syndrome","termid":"PBO:0024843"}


id: MONDO:0017299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute annular outer retinopathy","secondary_identifiers":["MEDGEN:1684428","Orphanet:284460","GARD:21121","UMLS:C5191002"],"synonyms":[{"name":"AAOR","type":"exact"}],"termid":"MONDO:0017299","xrefs":{"Monarch":{"xref_id":"0017299"}}}


id: PBO:0069482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 749, pseudogene","termid":"PBO:0069482"}


id: PBO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0000261"}


id: PBO:0056344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 3","termid":"PBO:0056344"}


id: MONDO:1012614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Form of glomerulonephritis that occurs in pigs, is characterized by glomerular hypercellularity and thickening of the glomerular capillary walls and glomerular basement membrane due to large amounts of dense deposits, and is caused by an absence of omplement regulator factor H.","definition_xrefs":["PMID:12466119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis, non-human animal","termid":"MONDO:1010258"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membranoproliferative glomerulonephritis, CFH-related, pig","secondary_identifiers":["OMIA:000636-9823"],"synonyms":[{"name":"hereditary factor H deficiency, pig","type":"related"},{"name":"membranoproliferative glomerulonephritis type II, pig","type":"exact"},{"name":"porcine dense deposit disease","type":"related"}],"termid":"MONDO:1012614","xrefs":{"Monarch":{"xref_id":"1012614"}}}


id: MONDO:0007748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercalciuria, absorptive, 2","secondary_identifiers":["MESH:C562790","OMIM:143870","SCTID:237886009","UMLS:C0342639","GARD:18583","ICD9:V18.19","MEDGEN:137974"],"synonyms":[{"name":"HCA2","type":"related"},{"name":"hypercalciuria, absorptive, 2","type":"exact"},{"name":"hypercalciuria, absorptive, susceptibility to","type":"exact"},{"name":"hypercalciuria, absorptive, type 2","type":"exact"},{"name":"hypercalciuria, familial idiopathic","type":"related"}],"termid":"MONDO:0007748","xrefs":{"Monarch":{"xref_id":"0007748"}}}


id: MONDO:1012251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital lethal spasms, non-human animal","termid":"MONDO:1011630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital lethal spasms, cattle","secondary_identifiers":["OMIA:000927-9913"],"termid":"MONDO:1012251","xrefs":{"Monarch":{"xref_id":"1012251"}}}


id: PBO:0065471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 2","termid":"PBO:0065471"}


id: PBO:0079963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 1","termid":"PBO:0079963"}


id: GO:1901697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of olivetolic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"olivetolic acid biosynthetic process","synonyms":[{"name":"olivetolic acid anabolism","type":"exact"},{"name":"olivetolic acid biosynthesis","type":"exact"},{"name":"olivetolic acid formation","type":"exact"},{"name":"olivetolic acid synthesis","type":"exact"}],"termid":"GO:1901697"}


id: GO:0099609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the side of a microtubule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008017","GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"microtubule lateral binding","termid":"GO:0099609"}


id: PBO:0074093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 8","termid":"PBO:0074093"}


id: PBO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase Sod1","termid":"PBO:0000718"}


id: MONDO:0009735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Netherton syndrome (NS) is a skin disorder characterized by congenital ichthyosiform erythroderma (CIE), a distinctive hair shaft defect (trichorrhexis invaginata; TI) and atopic manifestations.","definition_xrefs":["Orphanet:634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","termid":"MONDO:0020189"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005328","MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"Netherton syndrome","secondary_identifiers":["NANDO:1200619","NORD:1290","SCTID:312514006","GARD:7182","MESH:D056770","MedDRA:10062909","icd11.foundation:1797493665","SCTID:54336006","UMLS:C5574950","OMIM:256500","NANDO:2200993","NANDO:1200338","MEDGEN:1802991","NCIT:C84922","DOID:0050474"],"synonyms":[{"name":"Comel-Netherton syndrome","type":"related"},{"name":"Comèl-Netherton syndrome","type":"exact"},{"name":"Ichthyosis, Netherton Syndrome","type":"exact"},{"name":"NS","type":"exact"},{"name":"Netherton disease","type":"related"},{"name":"Netherton syndrome","type":"exact"},{"name":"bamboo hair syndrome","type":"exact"},{"name":"erythroderma, ichthyosiform, with hypotrichosis and hyper-IgE","type":"related"},{"name":"neth","type":"related"}],"termid":"MONDO:0009735","xrefs":{"Monarch":{"xref_id":"0009735"}}}


id: MOD:01715
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01715"}


id: GO:0033158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein import into nucleus, translocation (obsolete GO:0033158)","synonyms":[{"name":"regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033158"}


id: PBO:0041150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 5","termid":"PBO:0041150"}


id: PBO:0027838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027838"}


id: MONDO:1012981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anemia, non-human animal","termid":"MONDO:1012981","xrefs":{"Monarch":{"xref_id":"1012981"}}}


id: PBO:0086454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YLR046C has a paralog, RTA1, that arose from the whole genome duplication","termid":"PBO:0086454"}


id: MONDO:0023554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular failure, the cause of which is not present at birth.","definition_xrefs":["NCIT:C131091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired testicular failure","secondary_identifiers":["MEDGEN:588672","UMLS:C0403818","SCTID:236811002"],"synonyms":[{"name":"acquired testicular failure","type":"exact"}],"termid":"MONDO:0023554","xrefs":{"Monarch":{"xref_id":"0023554"}}}


id: GO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA-dependent DNA replication.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-dependent DNA replication DNA ligation (obsolete GO:0051104)","synonyms":[{"name":"DNA ligation during DNA-dependent DNA replication","type":"related"},{"name":"DNA ligation involved in DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0051104"}


id: PBO:0068182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 489","termid":"PBO:0068182"}


id: PBO:0042460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 2","termid":"PBO:0042460"}


id: GO:0019299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"rhamnose metabolic process","synonyms":[{"name":"rhamnose metabolism","type":"exact"}],"termid":"GO:0019299"}


id: MONDO:0971032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that is characterized by ethanol fermentation in the bladder and the absence of alcoholic intoxication.","definition_xrefs":["DOID:0081456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"bladder fermentation syndrome","termid":"MONDO:0971032","xrefs":{"Monarch":{"xref_id":"0971032"}}}


id: PBO:0055194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2619","termid":"PBO:0055194"}


id: PBO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMP deaminase family/ methyltransferase bifunctional enzyme involved in riboflavin biosynthesis and tRNA pseudouridine biosynthesis Rib2 (predicted)","termid":"PBO:0018286"}


id: PBO:0044368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 1","termid":"PBO:0044368"}


id: MONDO:0043247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by upper gastrointestinal tract bleeding caused by longitudinal mucosal tears in the gastroesophageal junction. The tears result from retching or forceful coughing. It was initially described in alcoholics.","definition_xrefs":["NCIT:C84881"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mallory-Weiss syndrome","secondary_identifiers":["SCTID:35265002","MEDGEN:44265","UMLS:C0024633","MESH:D008309"],"synonyms":[{"name":"Lacerations-gastroesophageal junction, mucosal","type":"related"},{"name":"Lacerations-gastroesophageal junctions, mucosal","type":"related"},{"name":"Mallory Weiss laceration","type":"related"},{"name":"Mallory Weiss syndrome","type":"related"},{"name":"Mallory Weiss tear","type":"related"},{"name":"Mallory-Weiss laceration","type":"related"},{"name":"Mallory-Weiss syndrome","type":"exact"},{"name":"Mallory-Weiss tear","type":"related"},{"name":"gastro-esophageal laceration-hemorrhage syndrome","type":"related"},{"name":"gastroesophageal laceration haemorrhage","type":"related"},{"name":"gastroesophageal laceration hemorrhage","type":"related"},{"name":"gastroesophageal laceration-hemorrhage","type":"related"},{"name":"gastroesophageal laceration-hemorrhage syndrome","type":"related"},{"name":"gastroesophageal laceration-hemorrhages","type":"related"},{"name":"junction, mucosal Lacerations-gastroesophageal","type":"related"},{"name":"junctions, mucosal Lacerations-gastroesophageal","type":"related"},{"name":"laceration, Mallory-Weiss","type":"related"},{"name":"laceration-hemorrhage, gastroesophageal","type":"related"},{"name":"laceration-hemorrhages, gastroesophageal","type":"related"},{"name":"mucosal Lacerations gastroesophageal junction","type":"related"},{"name":"mucosal Lacerations-gastroesophageal junction","type":"related"},{"name":"mucosal Lacerations-gastroesophageal junctions","type":"related"},{"name":"mucosal lacerations - gastroesophageal junction","type":"related"},{"name":"syndrome, Mallory-Weiss","type":"related"}],"termid":"MONDO:0043247","xrefs":{"Monarch":{"xref_id":"0043247"}}}


id: GO:1900495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"down regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"negative regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900495"}


id: PBO:0083115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair methyltransferase (6-O-methylguanine-DNA methylase); involved in protection against DNA alkylation damage","termid":"PBO:0083115"}


id: GO:0034717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin6, Gemin7, and unrip (STRAP), and can bind to snRNAs; may play a role in snRNP assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Gemin6-Gemin7-unrip complex","termid":"GO:0034717"}


id: GO:1990042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which glycerol is converted into glycerone and NAD+ or NADP is reduced.","definition_xrefs":["PMID:22979944"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerol dehydrogenase [NAD(P)+] activity (obsolete GO:1990042)","synonyms":[{"name":"glycerol dehydrogenase activity, NAD or NADP as acceptor","type":"exact"}],"termid":"GO:1990042"}


id: GO:2000246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Ftsz-dependent cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokinesis","termid":"GO:0032467"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of FtsZ-dependent cytokinesis","termid":"GO:2000244"},{"relation_name":"positively_regulates","term_name":"FtsZ-dependent cytokinesis","termid":"GO:0043093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of FtsZ-dependent cytokinesis","synonyms":[{"name":"positive regulation of prokaryote-type cytokinesis","type":"related"},{"name":"positive regulation of prokaryotic fission","type":"related"}],"termid":"GO:2000246"}


id: GO:0006207
data:
  {"annotated_genes":["SJAG_00694","SJAG_00779","SJAG_03164","SJAG_00197","SJAG_00444","SJAG_05024","SJAG_00392","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57777,71488,71730,73363,73667,75087,75826,89652],"is_not":false,"summary":null,"term":"GO:0006207"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.","definition_xrefs":["ISBN:0716720094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"'de novo' pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' pyrimidine base anabolism","type":"exact"},{"name":"'de novo' pyrimidine base biosynthesis","type":"exact"},{"name":"'de novo' pyrimidine base biosynthetic process","type":"exact"},{"name":"'de novo' pyrimidine base formation","type":"exact"},{"name":"'de novo' pyrimidine base synthesis","type":"exact"}],"termid":"GO:0006207","terms_by_termid":{"GO:0006207":null}}


id: PBO:0088794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GRASP protein family Golgi protein","termid":"PBO:0088794"}


id: MONDO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sucrose intolerance disease (obsolete MONDO:0045021)","secondary_identifiers":["ICD9:271.3","SCTID:190753003"],"synonyms":[{"name":"sucrose intolerance","type":"exact"}],"termid":"MONDO:0045021","xrefs":{"Monarch":{"xref_id":"0045021"}}}


id: MONDO:0020464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Euryblepharon is a rare congenital eyelid anomaly of unknown etiology characterized by the bilateral horizontal enlargement of the palpebral fissure with vertically shortened eyelids, lateral canthus malpositioning and lateral ectropion. It may be isolated or associated with other ocular anomalies (e.g. strabismus or telecanthus) or systemic anomalies (e.g. blepharo-cheilo-odontic syndrome). In severe cases, it may result in lagophthalmos and exposure keratopathy, requiring surgical treatment.","definition_xrefs":["Orphanet:99172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"euryblepharon","secondary_identifiers":["icd11.foundation:2086603843","SCTID:400954002","MEDGEN:724511","UMLS:C1303001","GARD:19674"],"termid":"MONDO:0020464","xrefs":{"Monarch":{"xref_id":"0020464"}}}


id: PBO:0031146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_polysaccharide_level","termid":"PBO:0031146"}


id: PBO:0088760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase Pcs60","termid":"PBO:0088760"}


id: GO:0052249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of RNA levels in other organism involved in symbiotic interaction (obsolete GO:0052249)","synonyms":[{"name":"modulation of RNA levels in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052249"}


id: GO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-histidine + ATP = carnosine + ADP + phosphate + H+.","definition_xrefs":["RHEA:19297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"carnosine synthase activity","secondary_identifiers":["MetaCyc:CARNOSINE-SYNTHASE-RXN","Reactome:R-HSA-6786245","EC:6.3.2.11"],"synonyms":[{"name":"L-histidine:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"carnosine synthetase activity","type":"related"},{"name":"carnosine-anserine synthetase activity","type":"related"},{"name":"carnosine-homocarnosine synthetase activity","type":"related"},{"name":"homocarnosine-carnosine synthetase activity","type":"related"}],"termid":"GO:0047730"}


id: PBO:0026709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_binding","termid":"PBO:0026709"}


id: GO:0045516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-19 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-19 receptor binding","synonyms":[{"name":"IL-19","type":"narrow"},{"name":"interleukin-19 receptor ligand","type":"narrow"}],"termid":"GO:0045516"}


id: MONDO:0025061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute disease of young pigs that is usually associated with weaning. It is characterized clinically by paresis and subcutaneous edema.","definition_xrefs":["MESH:D004488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edema disease of swine","synonyms":[{"name":"swine edema disease","type":"related"},{"name":"swine edema diseases","type":"related"},{"name":"swine oedema disease","type":"related"},{"name":"swine oedema diseases","type":"related"}],"termid":"MONDO:0025061","xrefs":{"Monarch":{"xref_id":"0025061"}}}


id: FYPO:0009005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which microtubule-based movement oscillations occur at a faster speed than normal in a daughter cell that inherits no mitochondria.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased interphase nuclear movement velocity in daughter cell without mitochondria","synonyms":[{"name":"increased interphase nuclear oscillation velocity in daughter cell without mitochondria","type":"exact"}],"termid":"FYPO:0009005"}


id: GO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclopropanecarboxylate + CoASH = cyclopropanecarboxyl-CoA + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclopropanecarboxylate-CoA ligase activity (obsolete GO:0034793)","termid":"GO:0034793"}


id: PBO:0045398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 3","termid":"PBO:0045398"}


id: MOD:01978
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using either free L-asparagine and releasing ammonia or using a peptidyl L-aspartic acid residue and releasing water.","definition_xrefs":["PubMed:8706862","RESID:AA0525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01978"}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: MONDO:0025353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 90","secondary_identifiers":["DOID:0070381","UMLS:C5542345","OMIM:301058","GARD:15286","MEDGEN:1786502"],"synonyms":[{"name":"DEE90","type":"exact"},{"name":"developmental and epileptic encephalopathy 90","type":"exact"},{"name":"developmental and epileptic encephalopathy 90, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0025353","xrefs":{"Monarch":{"xref_id":"0025353"}}}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0063517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 2, pseudogene","termid":"PBO:0063517"}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: PBO:0063884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class N","termid":"PBO:0063884"}


id: MONDO:1011469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in domestic goose.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, domestic goose","secondary_identifiers":["OMIA:000037-8843"],"termid":"MONDO:1011469","xrefs":{"Monarch":{"xref_id":"1011469"}}}


id: GO:1990161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homohexameric protein complex that possesses DNA helicase activity; functions during DNA replication and repair.","definition_xrefs":["PMID:17947583","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DnaB helicase complex","synonyms":[{"name":"DnaB hexamer","type":"exact"}],"termid":"GO:1990161"}


id: PBO:0083175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps origin of replication ARS918, partially overlaps ORF RPB3/YIL021W","termid":"PBO:0083175"}


id: GO:1901378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic heteropentacyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic heteropentacyclic compound biosynthetic process (obsolete GO:1901378)","synonyms":[{"name":"organic heteropentacyclic compound anabolism","type":"exact"},{"name":"organic heteropentacyclic compound biosynthesis","type":"exact"},{"name":"organic heteropentacyclic compound formation","type":"exact"},{"name":"organic heteropentacyclic compound synthesis","type":"exact"}],"termid":"GO:1901378"}


id: PBO:0089317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body associated protein Pby1","termid":"PBO:0089317"}


id: PBO:0111066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cnt5","termid":"PBO:0111066"}


id: PR:O13784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2401 gene.","definition_xrefs":["UniProtKB:O13784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.06","synonyms":[{"name":"Spom972h-rps2401","type":"exact"}],"termid":"PR:O13784"}


id: PBO:0040097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 3 (inactive)","termid":"PBO:0040097"}


id: GO:1902756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sulfurated eukaryotic molybdenum cofactor(2-).","definition_xrefs":["GOC:TermGenie","PMID:18258600","GO_REF:0000068","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolic process","termid":"GO:1902755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5963"],"synonyms":[{"name":"sulfurated eukaryotic molybdenum cofactor(2-) anabolism","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthesis","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) formation","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) synthesis","type":"exact"}],"termid":"GO:1902756"}


id: GO:0099243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"synaptic membrane","termid":"GO:0097060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of synaptic membrane","termid":"GO:0099243"}


id: PATO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001103 relative stiffness value (obsolete PATO:0001103)","termid":"PATO:0001103"}


id: FYPO:0004654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal and does not extend over the entire cell division site.","definition_xrefs":["PomBase:mah","PMID:25473118"],"direct_ancestors":[{"relation_name":"has_part","term_name":"decreased secondary cell septum thickness","termid":"FYPO:0004651"},{"relation_name":"is_a","term_name":"decreased secondary cell septum thickness","termid":"FYPO:0004651"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"thin, incomplete secondary cell septum","synonyms":[{"name":"incomplete secondary cell septum with decreased thickness","type":"exact"},{"name":"incomplete secondary cell septum with reduced thickness","type":"exact"},{"name":"thin, discontinuous secondary septum","type":"exact"},{"name":"thin, incomplete secondary cell septum during mitotic cell cycle","type":"related"},{"name":"thin, incomplete secondary cell septum during vegetative growth","type":"exact"},{"name":"thin, incomplete secondary septum","type":"exact"}],"termid":"FYPO:0004654"}


id: MONDO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of the inferior vena cava","secondary_identifiers":["ICD9:747.49","SCTID:81577001","UMLS:C0265932","Orphanet:95499","MEDGEN:539592","GARD:19276"],"synonyms":[{"name":"congenital anomaly of the IVC","type":"exact"},{"name":"congenital anomaly of the inferior caval vein","type":"exact"}],"termid":"MONDO:0019830","xrefs":{"Monarch":{"xref_id":"0019830"}}}


id: PBO:0085616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early pre-mRNA splicing; component of the pre-mRNA-U1 snRNP complex, the commitment complex; interacts with Msl5p/BBP splicing factor and Sub2p; similar to metazoan splicing factor U2AF65","termid":"PBO:0085616"}


id: GO:0003754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct non-covalent assembly of polypeptide-containing structures in vivo, but is not a component of these assembled structures when they are performing their normal biological function.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone activity (obsolete GO:0003754)","synonyms":[{"name":"chaperone activity","type":"exact"}],"termid":"GO:0003754"}


id: PATO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark red","termid":"PATO:0001261"}


id: MOD:02065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"}


id: GO:0030050
data:
  {"annotated_genes":["SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118205],"is_not":false,"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Movement of a vesicle along an actin filament, mediated by motor proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle transport along actin filament","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030050","terms_by_termid":{"GO:0030050":null}}


id: PBO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-64 (pseudogene)","termid":"PBO:0051474"}


id: MONDO:0018392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility with spermatogenesis disorder due to single gene mutation (obsolete MONDO:0018392)","secondary_identifiers":["Orphanet:399786"],"termid":"MONDO:0018392","xrefs":{"Monarch":{"xref_id":"0018392"}}}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: PBO:0073252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN4 antisense RNA 1","termid":"PBO:0073252"}


id: GO:2000082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"regulation of L-ascorbic acid formation","type":"exact"},{"name":"regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"regulation of ascorbate biosynthesis","type":"exact"},{"name":"regulation of ascorbate biosynthetic process","type":"exact"},{"name":"regulation of vitamin C biosynthesis","type":"exact"},{"name":"regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000082"}


id: MONDO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular dystrophy (obsolete MONDO:0004912)","termid":"MONDO:0004912","xrefs":{"Monarch":{"xref_id":"0004912"}}}


id: PBO:0076450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tafazzin, phospholipid-lysophospholipid transacylase","termid":"PBO:0076450"}


id: GO:0102725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 24-methyldesmosterol + NADPH = campesterol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 24-methyldesmosterol reductase activity (obsolete GO:0102725)","termid":"GO:0102725"}


id: PBO:0049974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1C","termid":"PBO:0049974"}


id: MONDO:0005916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The clinical condition in which any part of the placenta invades and is inseparable from the uterine wall. (reVITALize)","definition_xrefs":["NCIT:C26856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta accreta","secondary_identifiers":["icd11.foundation:298160226","SCTID:70129008","EFO:0007440","Orphanet:662721","MESH:D010921","DOID:4744","UMLS:C0032044","MEDGEN:10780"],"synonyms":[{"name":"Increta, placenta","type":"related"},{"name":"Percreta, placenta","type":"related"},{"name":"accreta, placenta","type":"related"},{"name":"placenta Increta","type":"related"},{"name":"placenta Percreta","type":"related"}],"termid":"MONDO:0005916","xrefs":{"Monarch":{"xref_id":"0005916"}}}


id: PBO:0086668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational 'guilt by association' analysis","termid":"PBO:0086668"}


id: GO:1902008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of toxin transport.","definition_xrefs":["PMID:22792315","GOC:dph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of toxin transport (obsolete GO:1902008)","synonyms":[{"name":"down regulation of toxin transport","type":"exact"},{"name":"down-regulation of toxin transport","type":"exact"},{"name":"downregulation of toxin transport","type":"exact"},{"name":"inhibition of toxin transport","type":"narrow"}],"termid":"GO:1902008"}


id: PBO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-Pck2-signaling pathway","termid":"PBO:0001551"}


id: PBO:0080676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 3","termid":"PBO:0080676"}


id: MONDO:1011002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, rabbit","secondary_identifiers":["OMIA:000965-9986"],"termid":"MONDO:1011002","xrefs":{"Monarch":{"xref_id":"1011002"}}}


id: GO:1901664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of NAD+ ADP-ribosyltransferase activity (obsolete GO:1901664)","synonyms":[{"name":"regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901664"}


id: PATO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000099 plant growth hormone sensitivity (obsolete PATO:0000099)","termid":"PATO:0000099"}


id: GO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a lung lobe from unspecified parts. This process begins with the specific processes that contribute to the appearance of the lobe and ends when the structural rudiment is recognizable. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"lung lobe morphogenesis","termid":"GO:0060463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe formation","termid":"GO:0060464"}


id: PBO:0048660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 2","termid":"PBO:0048660"}


id: PBO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO3B antisense RNA 1","termid":"PBO:0060333"}


id: MONDO:0015093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nodular neuronal heterotopia","termid":"MONDO:0016292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-cortical nodular heterotopia","secondary_identifiers":["GARD:19775","Orphanet:101029","UMLS:C5681805","MEDGEN:1843064","icd11.foundation:1683302159"],"termid":"MONDO:0015093","xrefs":{"Monarch":{"xref_id":"0015093"}}}


id: PBO:0112485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex/ ATP synthase assembly protein Mra2","termid":"PBO:0112485"}


id: MONDO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2Y (LGMD2Y) is a form of limb-girdle muscular dystrophy, presenting in the first or second decades of life, characterized by slowly progressive proximal and distal muscle weakness and atrophy. Additional manifestations include contractures of the proximal and distal interphalangeal hand joints, rigid spine, restricted pulmonary function, and mild cardiomyopathy.","definition_xrefs":["Orphanet:424261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"TOR1AIP1-related myopathy","termid":"MONDO:0100582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2Y","secondary_identifiers":["NCIT:C181000","MEDGEN:1385152","OMIM:617072","DOID:0110289","SCTID:725907002","UMLS:C4511482","GARD:17708"],"synonyms":[{"name":"LGMD2Y","type":"exact"},{"name":"TOR1AIP1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TOR1AIP1","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to LAP1B deficiency","type":"exact"},{"name":"autosomal recessive muscular dystrophy due to Torsin-1A-interacting protein 1 deficiency","type":"exact"},{"name":"muscular dystrophy with progressive weakness, distal contractures and rigid spine","type":"exact"},{"name":"muscular dystrophy, autosomal recessive, with rigid spine and distal joint contractures","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Y","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2y","type":"exact"}],"termid":"MONDO:0014900","xrefs":{"Monarch":{"xref_id":"0014900"}}}


id: MONDO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Crigler-Najjar syndrome (obsolete MONDO:0016084)","termid":"MONDO:0016084","xrefs":{"Monarch":{"xref_id":"0016084"}}}


id: PBO:0028649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mRNA_splicing,_via_spliceosome","termid":"PBO:0028649"}


id: MONDO:1012233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"quaking, non-human animal","termid":"MONDO:1011629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaking, golden hamster","secondary_identifiers":["OMIA:000846-10036"],"termid":"MONDO:1012233","xrefs":{"Monarch":{"xref_id":"1012233"}}}


id: PBO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Vps71","termid":"PBO:0003878"}


id: FYPO:0004914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit differs from normal.","definition_xrefs":["PMID:18157152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomeric repeat sequence","termid":"FYPO:0004914"}


id: GO:1902981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in mitotic DNA replication (obsolete GO:1902981)","synonyms":[{"name":"synthesis of RNA primer involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902981"}


id: PR:Q9Y7K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- san1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7K6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2A9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.04c","synonyms":[{"name":"Spom972h-san1","type":"exact"}],"termid":"PR:Q9Y7K6"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: PBO:0041719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 4, pseudogene","termid":"PBO:0041719"}


id: PBO:0080089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 50","termid":"PBO:0080089"}


id: PBO:0064528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit GL","termid":"PBO:0064528"}


id: MONDO:0007596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete factor VIII deficiency (obsolete MONDO:0007596)","termid":"MONDO:0007596","xrefs":{"Monarch":{"xref_id":"0007596"}}}


id: PBO:0080147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 3","termid":"PBO:0080147"}


id: PBO:0091747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter Sul1","termid":"PBO:0091747"}


id: MONDO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cyst","secondary_identifiers":["MEDGEN:14540","MESH:D010048","ICD9:620.2","HP:0000138","SCTID:79883001","UMLS:C0029927","DOID:5119"],"synonyms":[{"name":"corpus luteum cyst","type":"related"},{"name":"corpus luteum cysts","type":"related"},{"name":"cyst, corpus luteum","type":"related"},{"name":"cyst, ovarian","type":"related"},{"name":"cysts, corpus luteum","type":"related"},{"name":"cysts, ovarian","type":"related"},{"name":"ovarian cyst","type":"exact"},{"name":"ovarian cyst (disease)","type":"exact"}],"termid":"MONDO:0003282","xrefs":{"Monarch":{"xref_id":"0003282"}}}


id: GO:0008481
data:
  {"annotated_genes":["SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a sphingoid base + ATP = a sphingoid 1-phosphate + ADP + H+.","definition_xrefs":["RHEA:51496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingosine kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SPHINGANINE-KINASE-RXN","GO:0001728","EC:2.7.1.91"],"synonyms":[{"name":"ATP:sphinganine 1-phosphotransferase activity","type":"related"},{"name":"dihydrosphingosine kinase (phosphorylating)","type":"related"},{"name":"dihydrosphingosine kinase activity","type":"related"},{"name":"sphinganine kinase activity","type":"related"},{"name":"sphingosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0008481","terms_by_termid":{"GO:0017050":null}}


id: PBO:0027600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027600"}


id: MONDO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hodgkin's paragranuloma (obsolete MONDO:0004626)","secondary_identifiers":["NCIT:C26956","DOID:8642"],"synonyms":[{"name":"Hodgkin paragranuloma","type":"exact"}],"termid":"MONDO:0004626","xrefs":{"Monarch":{"xref_id":"0004626"}}}


id: PBO:0025422
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid metabolism disorders","termid":"PBO:0025422"}


id: PBO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 9","termid":"PBO:0051901"}


id: PATO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entitity by natural process.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shedability","termid":"PATO:0001729"}


id: GO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming an alpha-beta T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell lineage commitment","termid":"GO:0002360"},{"relation_name":"part_of","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell lineage commitment","synonyms":[{"name":"alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"alpha-beta T-cell lineage commitment","type":"exact"},{"name":"alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002363"}


id: PBO:0085916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication","termid":"PBO:0085916"}


id: PBO:0042357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule pseudogene 1","termid":"PBO:0042357"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: PBO:0091574
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human HUS1","termid":"PBO:0091574"}


id: PBO:0068500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 86, pseudogene","termid":"PBO:0068500"}


id: GO:0140829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(in) + HCO3-(out) = solute(out) + HCO3-(in).","definition_xrefs":["PMID:12440690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"bicarbonate:monoatomic anion antiporter activity","secondary_identifiers":["TC:2.A.31.1.1"],"synonyms":[{"name":"bicarbonate:anion antiporter activity","type":"broad"},{"name":"hydrogencarbonate:monoatomic anion antiporter activity","type":"exact"}],"termid":"GO:0140829"}


id: MOD:01950
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-isoglutamyl histamine.","definition_xrefs":["PubMed:23022564","RESID:AA0596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl histamine","synonyms":[{"name":"(2S)-2-amino-5-([2-(1H-imidazol-5-yl)ethyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"(gamma-glutamyl)histamine","type":"exact"},{"name":"L-isoglutamyl histamine","type":"exact"}],"termid":"MOD:01950"}


id: PBO:0088892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A","termid":"PBO:0088892"}


id: MONDO:1040011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A human disorder which results from a tear in one of the major cervicocerebral arteries, allowing blood to enter the wall of the artery and split its layers. Pathogenesis typically leads to either stenosis or aneurysmal dilatation of the vessel.","definition_xrefs":["PMID:19096659","PMID:28722857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical artery dissection","termid":"MONDO:0006061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery dissection","synonyms":[{"name":"VAD","type":"exact"}],"termid":"MONDO:1040011","xrefs":{"Monarch":{"xref_id":"1040011"}}}


id: GO:0097621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RCH2NHR' + H2O + O2 = RCHO + R'NH2 + H2O2.","definition_xrefs":["PMID:15279562","GOC:pr","PMID:16129825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"monoamine oxidase activity","secondary_identifiers":["EC:1.4.3.4"],"synonyms":[{"name":"amine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0097621"}


id: GO:0047027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzyl (2R,3S)-2-methyl-3-hydroxybutanoate + NADP+ = benzyl 2-methyl-3-oxobutanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.217","RHEA:16405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzyl-2-methyl-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.217-RXN","KEGG_REACTION:R04370"],"synonyms":[{"name":"benzyl 2-methyl-3-hydroxybutyrate dehydrogenase activity","type":"related"},{"name":"benzyl-(2R,3S)-2-methyl-3-hydroxybutanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047027"}


id: SO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the five_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_coding_region","synonyms":[{"name":"five prime exon coding region","type":"exact"}],"termid":"SO:0000196"}


id: MONDO:0005561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathology involving the thoracic, thoracoabdominal, or abdominal aorta (including aneurysms). (ACC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic disorder","secondary_identifiers":["NCIT:C101253","DOID:520","SCTID:47040006","ICD9:447.9","MESH:D001018","EFO:0005775","UMLS:C0003493","MEDGEN:1618"],"synonyms":[{"name":"aorta disease","type":"exact"},{"name":"aorta disease or disorder","type":"exact"},{"name":"aortic disorder","type":"exact"},{"name":"disease of aorta","type":"exact"},{"name":"disease or disorder of aorta","type":"exact"},{"name":"disorder of aorta","type":"exact"},{"name":"disorder of the aorta","type":"exact"}],"termid":"MONDO:0005561","xrefs":{"Monarch":{"xref_id":"0005561"}}}


id: PBO:0072056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 26","termid":"PBO:0072056"}


id: GO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a heart valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve formation","termid":"GO:0003188"}


id: PBO:0081961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida binding protein","termid":"PBO:0081961"}


id: GO:0018725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-3,4-dihydrodiolphenanthrene + 2 X-SO3(-) = 2 HX + phenanthrene-3,4-dihydrodiolsulfate conjugate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-3,4-dihydrodiolphenanthrene sulfotransferase activity (obsolete GO:0018725)","synonyms":[{"name":"trans-3,4-dihydrodiolphenanthrene sulphotransferase activity","type":"exact"}],"termid":"GO:0018725"}


id: PBO:0113799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase Alg6","termid":"PBO:0113799"}


id: GO:0002128
data:
  {"annotated_genes":["SJAG_02352","SJAG_01269","SJAG_04649"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116841],"is_not":false,"summary":null,"term":"GO:0002128"},{"annotations":[99774,104839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null,"SJAG_04649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA nucleoside ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002128","terms_by_termid":{"GO:0002128":null,"GO:0002130":null}}


id: MONDO:0007459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilution, pigmentary","secondary_identifiers":["OMIM:126070","SCTID:23006000","UMLS:C1876214","MEDGEN:406294","MESH:C566872"],"synonyms":[{"name":"Albinoidism, oculocutaneous, autosomal dominant","type":"related"},{"name":"albinism, partial","type":"related"},{"name":"dilution, pigmentary","type":"exact"},{"name":"hypomelanotic disorder","type":"related"},{"name":"hypopigmentation","type":"related"}],"termid":"MONDO:0007459","xrefs":{"Monarch":{"xref_id":"0007459"}}}


id: GO:0006638
data:
  {"annotated_genes":["SJAG_02683","SJAG_02100","SJAG_02763","SJAG_03162","SJAG_03609","SJAG_02907","SJAG_03604","SJAG_02543","SJAG_04041","SJAG_02089","SJAG_02487","SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116202,114065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[76115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[91914,76335,73136,78838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[93789,100391,119613,73248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[95564,91994,93790,116810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"neutral lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid metabolism","type":"exact"}],"termid":"GO:0006638","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null,"GO:0046339":null,"GO:0046461":null}}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["UMLS:C0155120","DOID:11164","ICD9:371.43","MESH:C562399","NCIT:C118765","icd11.foundation:184627034","SCTID:35055000","OMIM:217500","MEDGEN:56354"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: GO:0043450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:jl","Wikipedia:Alkene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkene biosynthetic process","synonyms":[{"name":"alkene anabolism","type":"exact"},{"name":"alkene biosynthesis","type":"exact"},{"name":"alkene formation","type":"exact"},{"name":"alkene synthesis","type":"exact"}],"termid":"GO:0043450"}


id: PBO:0052000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAZF zinc finger 1","termid":"PBO:0052000"}


id: PBO:0027316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle","termid":"PBO:0027316"}


id: PBO:0085283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; receptor for the C-terminal tripeptide signal sequence (PTS1) of peroxisomal matrix proteins; required for peroxisomal matrix protein import; also proposed to have PTS1-receptor independent functions","termid":"PBO:0085283"}


id: GO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + dihydrosanguinarine = H2O2 + sanguinarine.","definition_xrefs":["EC:1.5.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydrobenzophenanthridine oxidase activity","secondary_identifiers":["RHEA:16621","MetaCyc:1.5.3.12-RXN"],"synonyms":[{"name":"dihydrobenzophenanthridine:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047132"}


id: PBO:0055175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2599","termid":"PBO:0055175"}


id: PBO:0051470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-68 (pseudogene)","termid":"PBO:0051470"}


id: FYPO:0000313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal morphology (i.e. size, shape, or structure), and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","synonyms":[{"name":"inviable after spore germination, undivided cell with abnormal germ tube morphology","type":"exact"},{"name":"inviable following spore germination, without cell division with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0000313"}


id: GO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silver (Ag+) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"silver ion transmembrane transporter activity","synonyms":[{"name":"silver transporter activity","type":"exact"}],"termid":"GO:0015080"}


id: GO:0097665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Mdm30 in S. cerevisiae.","definition_xrefs":["PMID:14747994","GOC:vw","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Mdm30 ubiquitin ligase complex","termid":"GO:0097665"}


id: PBO:0076022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17b","termid":"PBO:0076022"}


id: GO:1904401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroid stimulating hormone stimulus.","definition_xrefs":["PMID:11238928","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to Thyroid stimulating hormone","termid":"GO:1904400"},{"relation_name":"is_a","term_name":"cellular response to glycoprotein","termid":"GO:1904588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Thyroid stimulating hormone","termid":"GO:1904401"}


id: PBO:0060521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF intronic transcript 1","termid":"PBO:0060521"}


id: GO:0062096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a kinetochore into its constituent components.","definition_xrefs":["GOC:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetochore organization","termid":"GO:0051383"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore disassembly","termid":"GO:0062096"}


id: MONDO:0009115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital lactase deficiency is a rare severe gastrointestinal disorder in newborns primarily reported in Finland and characterized clinically by watery diarrhea on feeding with breast-milk or lactose-containing formula.","definition_xrefs":["Orphanet:53690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"congenital lactase deficiency","secondary_identifiers":["GARD:12311","ICD10CM:E73.0","MESH:C562600","icd11.foundation:2109252471","ICD9:271.3","UMLS:C0268179","DOID:0111646","MEDGEN:120617","OMIM:223000","SCTID:5388008"],"synonyms":[{"name":"Alactasia, congenital","type":"related"},{"name":"congenital lactase deficiency","type":"exact"},{"name":"disaccharide intolerance 2","type":"related"},{"name":"lactase deficiency, congenital","type":"related"}],"termid":"MONDO:0009115","xrefs":{"Monarch":{"xref_id":"0009115"}}}


id: MONDO:0016961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 10","termid":"MONDO:0016931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 10","secondary_identifiers":["GARD:20881","MONDO:0042978","Orphanet:262914","icd11.foundation:2004070452","UMLS:C0265437","MEDGEN:539251"],"synonyms":[{"name":"partial duplication of chromosome 10q","type":"exact"},{"name":"partial trisomy of chromosome 10q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 10","type":"exact"}],"termid":"MONDO:0016961","xrefs":{"Monarch":{"xref_id":"0016961"}}}


id: MONDO:0044776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature ovarian failure-10 (POF10) represents a syndrome characterized by primary amenorrhea, hypergonadotropic ovarian insufficiency, and genomic instability in somatic cells.nnFor a general phenotypic description and discussion of genetic heterogeneity of premature ovarian failure, see POF1 (OMIM:311360).nnFor a discussion of genetic heterogeneity of age at natural menopause, see MENOQ1 (OMIM:300488).","definition_xrefs":["OMIM:612885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 10","secondary_identifiers":["MEDGEN:898849","UMLS:C4225402","DOID:0080867"],"synonyms":[{"name":"Pof10","type":"related"},{"name":"menopause, natural, Age At, quantitative trait locus 3","type":"related"},{"name":"premature ovarian failure 10","type":"exact"}],"termid":"MONDO:0044776","xrefs":{"Monarch":{"xref_id":"0044776"}}}


id: GO:0071503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heparin","termid":"GO:0071503"}


id: PR:O59819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.10 gene.","definition_xrefs":["UniProtKB:O59819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP--glucose-1-phosphate uridylyltransferase-like protein Ugp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.10","synonyms":[{"name":"Spom972h-SPCC794.10","type":"exact"},{"name":"UDP-glucose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UDPGP (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UGPase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O59819"}


id: GO:0030437
data:
  {"annotated_genes":["SJAG_01662","SJAG_02248","SJAG_04853","SJAG_04922","SJAG_03483","SJAG_04271","SJAG_00993","SJAG_05309","SJAG_02529","SJAG_00974","SJAG_02169","SJAG_00971","SJAG_04080","SJAG_03536","SJAG_03915","SJAG_04859","SJAG_03013","SJAG_01483","SJAG_04275","SJAG_04615","SJAG_02712","SJAG_03746","SJAG_04483","SJAG_03557","SJAG_04184","SJAG_04868","SJAG_02241","SJAG_03587","SJAG_03057","SJAG_01321","SJAG_01531","SJAG_04781","SJAG_00826","SJAG_00114","SJAG_00486","SJAG_04236","SJAG_04901","SJAG_00405","SJAG_04470","SJAG_00821","SJAG_02320","SJAG_01769","SJAG_03688","SJAG_03090","SJAG_04010","SJAG_03250","SJAG_04140","SJAG_00663","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98443,98859,102665,107088,113512,114720],"is_not":false,"summary":null,"term":"GO:0030437"},{"annotations":[96363],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90575,90081,92127,93665],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[119811,119819,116098,111059,106120],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[74765,93391,106941],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[107253,97285,99477,103655,112107,120583,115945,100754,101837,121067,120884,109360,93180,99514],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[108805,94183,106078,98793,101767,109691,99478,101766,115946,104867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[113200],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[104236],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92609],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94079],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[117992,101769,107983,101768,96411,102056],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which cells that are products of meiosis acquire the specialized features of ascospores. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota).","definition_xrefs":["PMID:16339736","GOC:mcc","GOC:di","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"ascospore formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007151"],"synonyms":[{"name":"ascospore biosynthesis","type":"exact"},{"name":"spore formation","type":"broad"},{"name":"sporulation","type":"broad"}],"termid":"GO:0030437","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0056651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 18","termid":"PBO:0056651"}


id: GO:0018911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2,4-trichlorobenzene, a derivative of benzene with chlorine atoms attached to positions 1, 2 and 4 of the ring. It is a colorless liquid used as a solvent in chemical manufacturing, in dyes and intermediates, dielectric fluid, synthetic transformer oils, lubricants, heat-transfer medium and insecticides.","definition_xrefs":["PMID:1987135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2,4-trichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tbz"],"synonyms":[{"name":"1,2,4-trichlorobenzene metabolic process","type":"broad"},{"name":"1,2,4-trichlorobenzene metabolism","type":"broad"}],"termid":"GO:0018911"}


id: PBO:0054997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2412","termid":"PBO:0054997"}


id: PATO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000995 viscosity value (obsolete PATO:0000995)","termid":"PATO:0000995"}


id: _global:is_active_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","secondary_identifiers":["RO:0002432"],"synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"_global:is_active_in"}


id: MONDO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired Fanconi syndrome","termid":"MONDO:0060779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Preeyasombat-Varavithya syndrome","secondary_identifiers":["UMLS:C2930859","MESH:C535269","MEDGEN:443919","GARD:4476"],"synonyms":[{"name":"Fanconi syndrome caused by degraded tetracycline","type":"related"}],"termid":"MONDO:0060781","xrefs":{"Monarch":{"xref_id":"0060781"}}}


id: GO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075206)","synonyms":[{"name":"positive regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075206"}


id: GO:0035456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["PMID:9561374","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interferon-beta","synonyms":[{"name":"response to beta-1 interferon","type":"related"},{"name":"response to fiblaferon","type":"exact"},{"name":"response to fibroblast interferon","type":"exact"},{"name":"response to interferon beta","type":"exact"}],"termid":"GO:0035456"}


id: PR:Q9Y7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.06 gene.","definition_xrefs":["UniProtKB:Q9Y7S5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C569.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.06","synonyms":[{"name":"Spom972h-SPCC569.06","type":"exact"}],"termid":"PR:Q9Y7S5"}


id: SO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_right_handed_three","synonyms":[{"name":"catmat-3r","type":"exact"}],"termid":"SO:0100006"}


id: GO:0033956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid + H2O = a 7-hydroxyisoflavonoid + beta-D-apiofuranosyl-(1->6)-D-glucose.","definition_xrefs":["EC:3.2.1.161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"beta-apiosyl-beta-glucosidase activity","secondary_identifiers":["RHEA:21488","MetaCyc:RXN-9156"],"synonyms":[{"name":"7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid beta-D-apiofuranosyl-(1->6)-D-glucohydrolase activity","type":"related"},{"name":"furcatin hydrolase activity","type":"related"},{"name":"isoflavonoid 7-O-beta-apiosyl-glucoside beta-glucosidase activity","type":"related"},{"name":"isoflavonoid-7-O-beta[D-apiosyl-(1->6)-beta-D-glucoside] disaccharidase activity","type":"related"}],"termid":"GO:0033956"}


id: GO:0140173
data:
  {"annotated_genes":["SJAG_01205"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111311],"is_not":false,"summary":null,"term":"GO:0140173"}]},"cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H2A phosphorylated at serine 128.","definition_xrefs":["PMID:20679485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A reader activity","termid":"GO:0140054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0140566","GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"histone H2AS128phos reader activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140173","terms_by_termid":{"GO:0140173":null}}


id: PBO:0040771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 6","termid":"PBO:0040771"}


id: PBO:0040193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 6","termid":"PBO:0040193"}


id: GO:0097300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["PMID:21760595","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death","secondary_identifiers":["Reactome:R-HSA-5218859"],"synonyms":[{"name":"programmed cell death by necrosis","type":"exact"},{"name":"regulated necrosis","type":"broad"}],"termid":"GO:0097300"}


id: GO:0097649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complete microtubule with 13 protofilaments that fuses with an incomplete microtubule called B tubule (containing 10 protofilaments only) to form an axonemal outer doublet. Inner and outer dynein arms, as well as the radial spoke, are attached to the A tubule.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"A axonemal microtubule","synonyms":[{"name":"A tubule","type":"broad"}],"termid":"GO:0097649"}


id: MONDO:1012895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited macrothrombocytopenia that occurs in dogs due to a mutation in the TUBB1 gene.","definition_xrefs":["PMID:18466252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, dog","termid":"MONDO:1010659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, TUBB1-related, dog","secondary_identifiers":["OMIA:002434-9615"],"termid":"MONDO:1012895","xrefs":{"Monarch":{"xref_id":"1012895"}}}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: PBO:0080412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS39 divergent transcript","termid":"PBO:0080412"}


id: GO:1904959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["PMID:26734017","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cytochrome-c oxidase activity","synonyms":[{"name":"regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"regulation of cytochrome a3 activity","type":"narrow"},{"name":"regulation of cytochrome aa3 activity","type":"narrow"},{"name":"regulation of cytochrome c oxidase activity","type":"exact"},{"name":"regulation of cytochrome oxidase activity","type":"related"},{"name":"regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"regulation of indophenol oxidase","type":"narrow"},{"name":"regulation of indophenolase","type":"narrow"},{"name":"regulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1904959"}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000059","PMID:22995177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: PBO:0088037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin conjugating enzyme; involved in the ER-associated protein degradation (ERAD) pathway and in the inner nuclear membrane-associated degradation (INMAD) pathway; requires Cue1p for recruitment to the ER membrane; proposed to be involved in chromatin assembly","termid":"PBO:0088037"}


id: MONDO:0002951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of basal cell carcinoma morphologically characterized by the presence of thin strands of basaloid cells forming a reticulate pattern.","definition_xrefs":["NCIT:C27535"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tonsil cancer","termid":"MONDO:0006998"},{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin adenoid basal cell carcinoma","secondary_identifiers":["DOID:4294","ICDO:8098/3","SCTID:402525008","MEDGEN:266272","UMLS:C1304296"],"synonyms":[{"name":"adenoid basal cell carcinoma","type":"exact"},{"name":"skin adenoid basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002951","xrefs":{"Monarch":{"xref_id":"0002951"}}}


id: MOD:01774
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-octanoyl-L-lysine.","definition_xrefs":["PubMed:2215217","PubMed:12591875","RESID:AA0527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoylated residue","termid":"MOD:00666"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-octanoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(octanoylamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-octanoyllysine","type":"exact"},{"name":"N6-(1-oxooctyl)-L-lysine","type":"exact"},{"name":"N6-octanoyl-L-lysine","type":"exact"},{"name":"epsilon-octanoyllysine","type":"exact"}],"termid":"MOD:01774"}


id: PBO:0028480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cables_absent_from_cell","termid":"PBO:0028480"}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: GO:0097305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["PMID:24014527","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alcohol","secondary_identifiers":["GO:1990335"],"synonyms":[{"name":"process resulting in tolerance to alcohol","type":"narrow"}],"termid":"GO:0097305"}


id: PBO:0049913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM P-TEFb complex subunit 1","termid":"PBO:0049913"}


id: PBO:0089254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme synthase Met8","termid":"PBO:0089254"}


id: PBO:0089321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, Zds1","termid":"PBO:0089321"}


id: MONDO:0011016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 14q24.3-q31.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","PMID:8617492","DOID:0110750"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 11","secondary_identifiers":["OMIM:601208","MESH:C563371","UMLS:C1832605","MEDGEN:321994"],"synonyms":[{"name":"IDDM11","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 11","type":"related"},{"name":"insulin-dependent diabetes mellitus 11","type":"exact"}],"termid":"MONDO:0011016","xrefs":{"Monarch":{"xref_id":"0011016"}}}


id: PBO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 2","termid":"PBO:0061075"}


id: PBO:0035745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_absent_from_cell","termid":"PBO:0035745"}


id: MONDO:0024555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","secondary_identifiers":["UMLS:C5779875","MEDGEN:1826136","DOID:0080316","OMIM:604004"],"synonyms":[{"name":"Lvm","type":"related"},{"name":"MLC1","type":"related"},{"name":"VL","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"related"},{"name":"Van Der Knaap disease","type":"related"},{"name":"leukoencephalopathy with swelling and cysts","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts","type":"broad"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"exact"}],"termid":"MONDO:0024555","xrefs":{"Monarch":{"xref_id":"0024555"}}}


id: PBO:0034242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determines","termid":"PBO:0034242"}


id: MONDO:1012053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital copper deficiency, non-human animal","termid":"MONDO:1011838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, goat","secondary_identifiers":["OMIA:000226-9925"],"termid":"MONDO:1012053","xrefs":{"Monarch":{"xref_id":"1012053"}}}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: MONDO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder characterized by formation of bullae without traumatic origin, alopecia, hyperpigmentation, acrocyanosis, short stature, microcephaly, intellectual deficit, tapering fingers and nail abnormalities. Two families (one of whom was Dutch and the other Italian) have been described up to now, in which only males were affected. Transmission is X-linked recessive. The bullous dystrophy locus has been mapped to Xq26.3 in the Italian family and to Xq27.3 in the Dutch family.","definition_xrefs":["Orphanet:1867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous dystrophy, macular type","secondary_identifiers":["MEDGEN:167089","GARD:1038","UMLS:C0795974","MESH:C563065","OMIM:302000"],"synonyms":[{"name":"EBM","type":"related"},{"name":"bullous dystrophy hereditary macular type","type":"related"},{"name":"bullous dystrophy, hereditary macular type","type":"related"},{"name":"epidermolysis bullosa macular type","type":"related"},{"name":"epidermolysis bullosa, macular type","type":"related"}],"termid":"MONDO:0010540","xrefs":{"Monarch":{"xref_id":"0010540"}}}


id: GO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitter receptors.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor biosynthetic process (obsolete GO:0045212)","synonyms":[{"name":"neurotransmitter receptor anabolism","type":"exact"},{"name":"neurotransmitter receptor biosynthesis","type":"exact"},{"name":"neurotransmitter receptor formation","type":"exact"},{"name":"neurotransmitter receptor synthesis","type":"exact"}],"termid":"GO:0045212"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_00722","SJAG_02830","SJAG_04818","SJAG_03789","SJAG_00897","SJAG_02547","SJAG_02993","SJAG_03745","SJAG_04188","SJAG_04369","SJAG_02250","SJAG_00854","SJAG_04321","SJAG_04916","SJAG_03179","SJAG_04006","SJAG_00955","SJAG_01551","SJAG_01521","SJAG_04289","SJAG_02275","SJAG_03952","SJAG_00081","SJAG_01818","SJAG_00772","SJAG_06613","SJAG_04582","SJAG_04524","SJAG_04153","SJAG_02374","SJAG_00965","SJAG_03796","SJAG_04824","SJAG_03425","SJAG_04174","SJAG_00882","SJAG_01623","SJAG_04084","SJAG_04492","SJAG_02553","SJAG_01581","SJAG_02644","SJAG_03234","SJAG_02861","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62173,63769,80000,80519,99902],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[96870,106064,93591,73287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[73671,116220,72982,106516,76296,98712,107623,117326,105075,80084,98422,74680,107622,72111,106734,110991,115500,120642,60813,96615,117414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[73085,100867,72383,73380,91857,104024,79470,81247,74209,99162,76848,109428,117904,108437,117464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[109429],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02861":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: GO:0098973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic actin cytoskeleton","termid":"GO:0098973"}


id: PBO:0064678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 14","termid":"PBO:0064678"}


id: MONDO:0032643
data:
  {"annotated_genes":["SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88095],"is_not":false,"summary":null,"term":"MONDO:0032643"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:611256","MEDGEN:1648343","OMIM:618266","DOID:0112327","GARD:18030","UMLS:C4748873"],"synonyms":[{"name":"COASY-related pontocerebellar hypoplasia","type":"exact"},{"name":"PCH12","type":"exact"},{"name":"PONTOCEREBELLAR HYPOPLASIA, TYPE 12","type":"exact"}],"termid":"MONDO:0032643","terms_by_termid":{"MONDO:0032643":null},"xrefs":{"Monarch":{"xref_id":"0032643"}}}


id: GO:0048520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of behavior","synonyms":[{"name":"activation of behavior","type":"narrow"},{"name":"stimulation of behavior","type":"narrow"},{"name":"up regulation of behavior","type":"exact"},{"name":"up-regulation of behavior","type":"exact"},{"name":"upregulation of behavior","type":"exact"}],"termid":"GO:0048520"}


id: MONDO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal carcinosarcoma (obsolete MONDO:0001755)","termid":"MONDO:0001755","xrefs":{"Monarch":{"xref_id":"0001755"}}}


id: MONDO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete germ cell tumor of testis (obsolete MONDO:0018196)","termid":"MONDO:0018196","xrefs":{"Monarch":{"xref_id":"0018196"}}}


id: PBO:0046292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 2","termid":"PBO:0046292"}


id: GO:0042704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sloughing of the endometrium and blood vessels during menstruation that results from a drop in progesterone levels.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine wall breakdown","termid":"GO:0042704"}


id: GO:2000158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-specific protease activity","synonyms":[{"name":"positive regulation of UBP","type":"related"},{"name":"positive regulation of UCH2","type":"related"},{"name":"positive regulation of deubiquitinase activity","type":"exact"},{"name":"positive regulation of ubiquitin hydrolase activity","type":"exact"}],"termid":"GO:2000158"}


id: PBO:0046122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 1","termid":"PBO:0046122"}


id: MONDO:0005046
data:
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id: FYPO:0006523
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase following arrest at the mitotic G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PMID:11598020","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability following cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0006522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability in stationary phase following entry from mitotic G2 phase","synonyms":[{"name":"decreased viability in stationary phase following entry from mitotic G2 phase","type":"exact"},{"name":"loss of cell population viability in stationary phase following entry from mitotic G2 phase","type":"exact"},{"name":"loss of viability following mitotic G2 arrest and stationary phase entry","type":"exact"},{"name":"loss of viability in stationary phase following entry from mitotic G2/M phase transition","type":"exact"},{"name":"loss of viability of following entry into stationary phase from mitotic G2 phase","type":"exact"},{"name":"reduced viability in stationary phase following entry from mitotic G2 phase","type":"related"}],"termid":"FYPO:0006523"}


id: PBO:0081609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 532","termid":"PBO:0081609"}


id: PBO:0063353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOLCE antisense RNA 1","termid":"PBO:0063353"}


id: PBO:0068108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 415","termid":"PBO:0068108"}


id: GO:0032916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta3 production","termid":"GO:0032910"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta production","termid":"GO:0071636"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta3 production","synonyms":[{"name":"activation of transforming growth factor-beta3 production","type":"narrow"},{"name":"positive regulation of TGF-B3 production","type":"exact"},{"name":"positive regulation of TGFB3 production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"stimulation of transforming growth factor-beta3 production","type":"narrow"},{"name":"up regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"up-regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"upregulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032916"}


id: FYPO:0004503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is greater than normal.","definition_xrefs":["PMID:16149916","PMID:8247131","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"accumulation of HMW ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular mass ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular weight ubiquitin conjugates","type":"exact"},{"name":"increased HMW ubiquitin conjugate accumulation","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004503"}


id: GO:0007317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"regulates","term_name":"pole plasm oskar mRNA localization","termid":"GO:0045451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pole plasm oskar mRNA localization","synonyms":[{"name":"regulation of oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"regulation of pole plasm oskar mRNA localisation","type":"exact"}],"termid":"GO:0007317"}


id: PBO:0066003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein catalytic subunit alpha 2","termid":"PBO:0066003"}


id: GO:0090115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule that contributes to chromatin silencing.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete C-5 methylation on cytosine involved in chromatin silencing (obsolete GO:0090115)","termid":"GO:0090115"}


id: GO:0072283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the metanephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}


id: MONDO:0850098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of male infertility that is characterized by a combination of low number or oligozoospermia, poor motility or asthenozoospermia, and abnormal shape or teratozoospermia of sperms. OAT is the most common cause of male subfertility.","definition_xrefs":["DOID:0070311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oligoasthenoteratozoospermia","termid":"MONDO:0850098","xrefs":{"Monarch":{"xref_id":"0850098"}}}


id: PBO:0046734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EWS RNA binding protein 1","termid":"PBO:0046734"}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: MONDO:0008864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Biemond syndrome type 2 (BS2) is a rare genetic neurological and developmental disorder reported in a very small number of patients with a poorly defined phenotype which includes iris coloboma, short stature, obesity, hypogonadism, postaxial polydactyly, and intellectual disability. Hydrocephalus and facial dysostosis were also reported. BS2 shares features with Bardet-Biedl syndrome. There have been no further descriptions in the literature since 1997.","definition_xrefs":["Orphanet:141333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Biemond syndrome type 2","secondary_identifiers":["SCTID:717887003","GARD:882","MESH:C565902","MEDGEN:347159","OMIM:210350","UMLS:C1859487"],"synonyms":[{"name":"BIEMOND syndrome II","type":"related"},{"name":"BS2","type":"related"},{"name":"Biemond syndrome 2","type":"related"},{"name":"Biemond syndrome type 2","type":"exact"},{"name":"hypogonadism-short stature-coloboma-preaxial polydactyly syndrome","type":"exact"},{"name":"iris coloboma, intellectual disability, obesity, hypogenitalism, and postaxial polydactyly","type":"related"},{"name":"iris coloboma, mental retardation, obesity, hypogenitalism, and postaxial polydactyly","type":"related"}],"termid":"MONDO:0008864","xrefs":{"Monarch":{"xref_id":"0008864"}}}


id: GO:0046521
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91712,110808],"is_not":false,"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingoid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid breakdown","type":"exact"},{"name":"sphingoid catabolism","type":"exact"},{"name":"sphingoid degradation","type":"exact"}],"termid":"GO:0046521","terms_by_termid":{"GO:0046521":null}}


