# terms

id: GO:1901215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of neuron death (obsolete GO:1901215)","synonyms":[{"name":"down regulation of neuron cell death","type":"exact"},{"name":"down regulation of neuron death","type":"exact"},{"name":"down regulation of neuronal cell death","type":"exact"},{"name":"down-regulation of neuron cell death","type":"exact"},{"name":"down-regulation of neuron death","type":"exact"},{"name":"down-regulation of neuronal cell death","type":"exact"},{"name":"downregulation of neuron cell death","type":"exact"},{"name":"downregulation of neuron death","type":"exact"},{"name":"downregulation of neuronal cell death","type":"exact"},{"name":"inhibition of neuron cell death","type":"narrow"},{"name":"inhibition of neuron death","type":"narrow"},{"name":"inhibition of neuronal cell death","type":"narrow"},{"name":"negative regulation of neuron cell death","type":"exact"},{"name":"negative regulation of neuronal cell death","type":"exact"}],"termid":"GO:1901215"}


id: PBO:0017470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_after","termid":"PBO:0017470"}


id: PBO:0066357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 1","termid":"PBO:0066357"}


id: PBO:0054389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1785","termid":"PBO:0054389"}


id: PBO:0047221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member A","termid":"PBO:0047221"}


id: GO:1904340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopaminergic neuron differentiation.","definition_xrefs":["PMID:15522889","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"},{"relation_name":"positively_regulates","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopaminergic neuron differentiation","synonyms":[{"name":"activation of dopaminergic neuron differentiation","type":"narrow"},{"name":"up regulation of dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of dopaminergic neuron differentiation","type":"exact"}],"termid":"GO:1904340"}


id: PBO:0028332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_sorbitol","termid":"PBO:0028332"}


id: PBO:0076845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase","termid":"PBO:0076845"}


id: GO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism.","definition_xrefs":["GOC:fj","GOC:bf","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pore formation in membrane of another organism","synonyms":[{"name":"pore complex assembly in other organism","type":"exact"},{"name":"pore complex biogenesis in other organism","type":"exact"},{"name":"pore formation in membrane of other organism","type":"exact"},{"name":"pore formation in other organism","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0035915"}


id: GO:0030363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity required for the process of mRNA cleavage.","definition_xrefs":["GOC:mah","PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage factor activity (obsolete GO:0030363)","synonyms":[{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0030363"}


id: GO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.","definition_xrefs":["GOC:dph","PMID:10978835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"part_of","term_name":"auditory receptor cell morphogenesis","termid":"GO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell stereocilium organization","synonyms":[{"name":"auditory receptor cell stereocilium organisation","type":"exact"},{"name":"auditory receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060088"}


id: PBO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 5","termid":"PBO:0047714"}


id: PBO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 6","termid":"PBO:0044655"}


id: PBO:0086412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored protein; localized to the cell wall; involved in foam formation in sake mash by conferring hydrophobicity to the cell surface","termid":"PBO:0086412"}


id: MONDO:0011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic Infantile Neurological, Cutaneous, and Articular (CINCA) syndrome is characterized by skin rash, joint involvement, chronic meningitis with granulocytes and, in some cases, sensorineural hearing loss and ocular signs.","definition_xrefs":["Orphanet:1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CINCA syndrome","secondary_identifiers":["MEDGEN:98370","DOID:0090029","NANDO:1200468","GARD:1356","ICD9:759.89","SCTID:239826001","NANDO:2201066","OMIM:607115","NCIT:C116380","NORD:1496","UMLS:C0409818"],"synonyms":[{"name":"CINCA","type":"related"},{"name":"CINCA syndrome","type":"exact"},{"name":"CINCA/NOMID","type":"exact"},{"name":"Cryopyrin-associated periodic syndrome 3","type":"related"},{"name":"IOMID","type":"related"},{"name":"IOMID syndrome","type":"exact"},{"name":"NOMID","type":"exact"},{"name":"NOMID syndrome","type":"exact"},{"name":"Neonatal-Onset Multisystem Inflammatory Disease","type":"exact"},{"name":"Prieur Griscelli syndrome","type":"related"},{"name":"Prieur-Griscelli syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous and articular syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous articular syndrome","type":"exact"},{"name":"chronic neurologic cutaneous and articular syndrome","type":"exact"},{"name":"cryopyrin-associated periodic syndrome 3","type":"exact"},{"name":"infantile onset multisystem inflammatory disease","type":"related"},{"name":"infantile-onset multisystem inflammatory disease","type":"exact"},{"name":"multisystem inflammatory disease, neonatal-onset","type":"related"},{"name":"neonatal onset multisystem inflammatory disease","type":"related"},{"name":"neonatal-onset multisystem inflammatory disease","type":"exact"}],"termid":"MONDO:0011776","xrefs":{"Monarch":{"xref_id":"0011776"}}}


id: MONDO:0014323
data:
  {"annotated_genes":["SJAG_02150","SJAG_01998","SJAG_04296","SJAG_03827","SJAG_05342","SJAG_02947","SJAG_02946","SJAG_04637","SJAG_02955"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88433,88434,88435,88436,88437,88438,88439,88440,88441],"is_not":false,"summary":null,"term":"MONDO:0014323"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the SLC7A14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01998":null,"SJAG_02150":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03827":null,"SJAG_04296":null,"SJAG_04637":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 68","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H35.5","UMLS:C3810380","OMIM:615725","DOID:0110374","GARD:16004","MEDGEN:816710"],"synonyms":[{"name":"RP68","type":"exact"},{"name":"SLC7A14 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 68","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in SLC7A14","type":"exact"},{"name":"retinitis pigmentosa type 68","type":"exact"}],"termid":"MONDO:0014323","terms_by_termid":{"MONDO:0014323":null},"xrefs":{"Monarch":{"xref_id":"0014323"}}}


id: FYECO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Both M-factor and P-factor, endogenously produced by cells, were present in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000055 M and P factor produced (obsolete FYECO:0000055)","synonyms":[{"name":"presence of M-factor and P-factor","type":"exact"},{"name":"presence of mating pheromones","type":"exact"}],"termid":"FYECO:0000055"}


id: PBO:0006169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exists_during","termid":"PBO:0006169"}


id: GO:0048625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment","termid":"GO:0048625"}


id: GO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:dph","GOC:pr","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"negatively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006486"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein glycosylation","synonyms":[{"name":"negative regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060051"}


id: GO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of recombination within rDNA repeats (obsolete GO:0000020)","synonyms":[{"name":"negative regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0000020"}


id: MONDO:0012072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial partial lipodystrophy, Kobberling type, is a very rare form of familial partial lipodystrophy (FPLD) of unknown etiology characterized by lipoatrophy that is confined to the limbs and a normal or increased fat distribution of the face, neck, and trunk. Arterial hypertension and diabetes have also been associated. Inheritance is thought to be autosomal dominant.","definition_xrefs":["Orphanet:79084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial partial lipodystrophy, Kobberling type","secondary_identifiers":["MEDGEN:318591","OMIM:608600","SCTID:725035001","UMLS:C1720859","DOID:0070207","GARD:12598"],"synonyms":[{"name":"FPLD1","type":"exact"},{"name":"familial partial lipodystrophy type 1","type":"exact"},{"name":"familial partial lipodystrophy type Köbberling","type":"related"},{"name":"familial partial lipodystrophy, Köbberling type","type":"related"},{"name":"lipodystrophy, familial partial, Kobberling type","type":"related"},{"name":"lipodystrophy, familial partial, type 1","type":"related"}],"termid":"MONDO:0012072","xrefs":{"Monarch":{"xref_id":"0012072"}}}


id: MONDO:0007584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exostoses-anetodermia-brachydactyly type E syndrome is an association reported in a single kindred characterized by the variable presence of the following features: anetodermia (macular atrophy of the skin), multiple exostoses, and brachydactyly type E. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:1962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses-anetodermia-brachydactyly type E syndrome","secondary_identifiers":["MEDGEN:338695","MESH:C565034","OMIM:133690","GARD:2202","UMLS:C1851428"],"synonyms":[{"name":"exostoses with anetodermia and brachydactyly, type E","type":"related"}],"termid":"MONDO:0007584","xrefs":{"Monarch":{"xref_id":"0007584"}}}


id: PBO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA,poly(A)-bearing (predicted)","termid":"PBO:0000116"}


id: SO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of nucleotide bases in tRNA. It contains several dihydrouracil residues.","definition_xrefs":["ISBN:071671920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHU_loop","synonyms":[{"name":"D loop","type":"related"},{"name":"DHU loop","type":"exact"}],"termid":"SO:0001176"}


id: GO:0035301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that binds microtubules in a Hedgehog-dependent manner, and is required for signal transduction by members of the Hedgehog family of proteins. The core components of the complex are the serine/threonine protein kinase Fused, the kinesin motor protein Costal2 (Cos2), and a zinc finger transcription factor (Gli family members in humans, and Cubitus interruptus (Ci) in Drosophila).","definition_xrefs":["PMID:10825151","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Hedgehog signaling complex","synonyms":[{"name":"HSC","type":"exact"},{"name":"Hedgehog signalling complex","type":"exact"}],"termid":"GO:0035301"}


id: GO:0051048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of secretion","synonyms":[{"name":"down regulation of secretion","type":"exact"},{"name":"down-regulation of secretion","type":"exact"},{"name":"downregulation of secretion","type":"exact"},{"name":"inhibition of secretion","type":"narrow"}],"termid":"GO:0051048"}


id: GO:1905201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of gibberellin from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","GOC:TermGenie","PMID:27139299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gibberellin transmembrane transporter activity","termid":"GO:1905201"}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"alloparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"outparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: PBO:0045788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3C, pseudogene","termid":"PBO:0045788"}


id: FYPO:0004172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to heat","synonyms":[{"name":"decreased protein kinase activity during cellular response to heat stress","type":"exact"},{"name":"reduced protein kinase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0004172"}


id: PBO:0029623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydroxyurea","termid":"PBO:0029623"}


id: MONDO:0010306
data:
  {"annotated_genes":["SJAG_01540"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87983],"is_not":false,"summary":null,"term":"MONDO:0010306"}]},"cv_name":"mondo","definition":"X-linked intellectual disability, Cabezas type is characterized by intellectual deficit, muscle wasting, short stature, a prominent lower lip, small testes, kyphosis and joint hyperextensibility. An abnormal gait, tremor, decreased fine motor coordination and impaired speech are also present. The syndrome has been described in six boys from three generations of the same family. Transmission is X-linked and the causative gene has been localized to the q24-q25 region of the X chromosome.","definition_xrefs":["Orphanet:85293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Cabezas type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060822","OMIM:300354","GARD:13244","SCTID:719811001","MEDGEN:337334","UMLS:C1845861"],"synonyms":[{"name":"Cabezas syndrome","type":"exact"},{"name":"Cabezas syndrome; syndromic X-linked intellectual disability 15","type":"exact"},{"name":"Cabezas syndrome; syndromic X-linked mental retardation 15","type":"exact"},{"name":"Cabezas type of X-linked syndromic intellectual disability","type":"related"},{"name":"Cul4B-related X-linked intellectual disability","type":"related"},{"name":"MRSS","type":"exact"},{"name":"MRXS15","type":"exact"},{"name":"MRXSC","type":"exact"},{"name":"X-linked intellectual disability with short stature","type":"exact"},{"name":"X-linked intellectual disability with short stature, hypogonadism, and abnormal gait","type":"exact"},{"name":"X-linked intellectual disability, Cabezas type","type":"exact"},{"name":"X-linked mental retardation with short stature","type":"exact"},{"name":"X-linked mental retardation with short stature, hypogonadism, and abnormal gait","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 15","type":"related"},{"name":"intellectual disability, X-linked, syndromic 15 (Cabezas type)","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Cabezas type","type":"related"},{"name":"intellectual disability, X-linked, with short stature","type":"exact"},{"name":"intellectual disability, X-linked, with short stature, hypogonadism, and abnormal Gait","type":"related"},{"name":"mental retardation, X-linked, syndromic 15","type":"related"},{"name":"mental retardation, X-linked, syndromic 15 (Cabezas type)","type":"exact"},{"name":"mental retardation, X-linked, syndromic 15 (Cabezas type), X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Cabezas type","type":"related"},{"name":"mental retardation, X-linked, with short stature","type":"exact"},{"name":"mental retardation, X-linked, with short stature, hypogonadism, and abnormal Gait","type":"related"},{"name":"syndromic X-linked intellectual disability Cabezas type","type":"exact"}],"termid":"MONDO:0010306","terms_by_termid":{"MONDO:0010306":null},"xrefs":{"Monarch":{"xref_id":"0010306"}}}


id: GO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:14701881","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition","secondary_identifiers":["Reactome:R-HSA-9758919"],"synonyms":[{"name":"EMT","type":"exact"},{"name":"epithelial-mesenchymal transition","type":"exact"},{"name":"mesenchymal cell differentiation from epithelial cell","type":"exact"}],"termid":"GO:0001837"}


id: GO:0007529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process in which a synapse between a motor neuron and a muscle is initially formed.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of synaptic specificity at neuromuscular junction","termid":"GO:0007529"}


id: GO:1901804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucoside.","definition_xrefs":["PMID:16390337","Unipathway:UPA00237","PMID:15205427","GOC:yaf","GOC:TermGenie","PMID:8990303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside metabolic process","synonyms":[{"name":"beta-glucoside metabolism","type":"exact"}],"termid":"GO:1901804"}


id: PBO:0040930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 1","termid":"PBO:0040930"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: PBO:0030481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_GTP_binding","termid":"PBO:0030481"}


id: GO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of muscle cells is acquired and determined.","definition_xrefs":["GOC:go_curators","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate commitment","termid":"GO:0042693"}


id: GO:0004319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acyl-[acyl-carrier protein] + NADP+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["EC:1.3.1.10"],"gene_count":0,"genotype_count":0,"name":"obsolete enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity (obsolete GO:0004319)","synonyms":[{"name":"NADPH 2-enoyl Co A reductase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:NADP+ oxidoreductase (B-specific)","type":"related"},{"name":"enoyl acyl-carrier-protein reductase activity","type":"related"},{"name":"enoyl-ACP reductase (NADPH, B-specific) activity","type":"exact"},{"name":"enoyl-[acyl-carrier protein] reductase (NADPH, B-specific) activity","type":"exact"},{"name":"enoyl-acyl-carrier-protein reductase (NADPH, B-specific)","type":"related"},{"name":"enoyl-acyl-carrier-protein reductase (NADPH2, B-specific)","type":"related"},{"name":"reductase, enoyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0004319"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93091],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: PBO:0083308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps chromosome XII telomeric element core sequences","termid":"PBO:0083308"}


id: GO:0047097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + phylloquinone = 2,3-epoxyphylloquinone + A + H2O.","definition_xrefs":["RHEA:16745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phylloquinone monooxygenase (2,3-epoxidizing) activity","secondary_identifiers":["MetaCyc:1.14.99.20-RXN","EC:1.14.99.20","KEGG_REACTION:R03510"],"synonyms":[{"name":"phylloquinone epoxidase activity","type":"related"},{"name":"phylloquinone,hydrogen-donor:oxygen oxidoreductase (2,3-epoxidizing)","type":"related"},{"name":"vitamin K 2,3-epoxidase activity","type":"related"},{"name":"vitamin K epoxidase activity","type":"related"},{"name":"vitamin K1 epoxidase activity","type":"related"}],"termid":"GO:0047097"}


id: PBO:0084035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal and invasive growth, flocculation, and biofilm formation; major determinant of colony morphology; QTL that controls chronological life span; carries intragenic tandem repeats that are expanded in different strains; required for formation of fibrous interconnections between cells; role in co-flocculation with other yeast species; cleaved and shed from cells, contributing to their surface properties","termid":"PBO:0084035"}


id: PBO:0053323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 112","termid":"PBO:0053323"}


id: PBO:0083580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; substantially overlaps YMR295C; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0083580"}


id: MONDO:0007356
data:
  {"annotated_genes":["SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88209],"is_not":false,"summary":null,"term":"MONDO:0007356"}]},"cv_name":"mondo","definition":"Any Lynch syndrome in which the cause of the disease is a mutation in the MSH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0000426","MONDO:0004992"],"is_obsolete":false,"name":"Lynch syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:423615","MESH:C537261","OMIM:120435","UMLS:C2936783","NCIT:C6725","DOID:0070271","GARD:15052"],"synonyms":[{"name":"COCA1","type":"related"},{"name":"HNPCC1","type":"exact"},{"name":"Hereditary non-polyposis colon cancer type 1","type":"exact"},{"name":"LYNCH syndrome I","type":"related"},{"name":"Lynch 1 syndrome","type":"exact"},{"name":"Lynch syndrome 1","type":"exact"},{"name":"Lynch syndrome 2","type":"related"},{"name":"Lynch syndrome type 1","type":"exact"},{"name":"colon cancer, familial nonpolyposis, type 1","type":"related"},{"name":"colorectal cancer, hereditary nonpolyposis, type 1","type":"related"},{"name":"familial non-polyposis colon cancer type 1","type":"exact"},{"name":"hereditary nonpolyposis colorectal cancer type 1","type":"exact"}],"termid":"MONDO:0007356","terms_by_termid":{"MONDO:0007356":null},"xrefs":{"Monarch":{"xref_id":"0007356"}}}


id: PBO:0090323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein Nab3","termid":"PBO:0090323"}


id: PBO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A2","termid":"PBO:0048855"}


id: PBO:0067117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 162, pseudogene","termid":"PBO:0067117"}


id: GO:1903190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxal.","definition_xrefs":["GOC:TermGenie","PMID:22523093","PMID:23651081","GO_REF:0000068","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal catabolic process","synonyms":[{"name":"glyoxal breakdown","type":"exact"},{"name":"glyoxal catabolism","type":"exact"},{"name":"glyoxal degradation","type":"exact"}],"termid":"GO:1903190"}


id: GO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior cibarial plate are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"anterior cibarial plate development","termid":"GO:0048722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate morphogenesis","termid":"GO:0048717"}


id: GO:0070824
data:
  {"annotated_genes":["SJAG_03844","SJAG_00934","SJAG_02778","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73420,110137,114108,115299],"is_not":false,"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex that contains a core of four proteins -- Clr1, Clr2, Clr3, and Mit1 in fission yeast -- and localizes to all heterochromatic regions in the genome as well as some euchromatic sites. The complex is involved in regulating nucleosome positioning to assemble higher-order chromatin structures.","definition_xrefs":["GOC:mah","PMID:17289569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuRD complex","termid":"GO:0016581"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005654","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SHREC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Snf2/HDAC containing repressor complex","type":"exact"},{"name":"Snf2/Hdac repressive complex","type":"exact"}],"termid":"GO:0070824","terms_by_termid":{"GO:0070824":null}}


id: PBO:0018288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho7 (predicted)","termid":"PBO:0018288"}


id: GO:1990397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process which produces queuosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:vw","PMID:24911101"],"gene_count":0,"genotype_count":0,"name":"obsolete queuosine salvage (obsolete GO:1990397)","termid":"GO:1990397"}


id: PBO:0076218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase upregulated non-coding 1","termid":"PBO:0076218"}


id: PBO:0040682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pre-mRNA processing factor","termid":"PBO:0040682"}


id: FYPO:0005861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which CCR4-NOT complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished CCR4-NOT complex binding","synonyms":[{"name":"CCR4-NOT complex binding abolished","type":"exact"}],"termid":"FYPO:0005861"}


id: PBO:0087314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-2; AP-2 is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex","termid":"PBO:0087314"}


id: PATO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000717 viability value (obsolete PATO:0000717)","termid":"PATO:0000717"}


id: MONDO:1011978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000867"],"termid":"MONDO:1011978","xrefs":{"Monarch":{"xref_id":"1011978"}}}


id: PBO:0081016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB47 and NKTR antisense RNA 1","termid":"PBO:0081016"}


id: PBO:0057670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1261","termid":"PBO:0057670"}


id: PBO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 2","termid":"PBO:0061694"}


id: PBO:0053813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1074","termid":"PBO:0053813"}


id: GO:0008460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O.","definition_xrefs":["RHEA:17221","EC:4.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dTDP-glucose 4,6-dehydratase activity","secondary_identifiers":["KEGG_REACTION:R06513","MetaCyc:DTDPGLUCDEHYDRAT-RXN"],"synonyms":[{"name":"TDP-glucose oxidoreductase activity","type":"related"},{"name":"dTDP-glucose 4,6-hydro-lyase (dTDP-4-dehydro-6-deoxy-D-glucose-forming)","type":"related"},{"name":"dTDP-glucose 4,6-hydro-lyase activity","type":"related"},{"name":"dTDPglucose 4,6-dehydratase activity","type":"related"},{"name":"dTDPglucose 4,6-hydro-lyase activity","type":"related"},{"name":"thymidine diphosphoglucose oxidoreductase activity","type":"related"}],"termid":"GO:0008460"}


id: PBO:0075770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 2","termid":"PBO:0075770"}


id: PBO:0070553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 19","termid":"PBO:0070553"}


id: GO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"T cell mediated cytotoxicity","termid":"GO:0001913"},{"relation_name":"part_of","term_name":"T cell activation involved in immune response","termid":"GO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytotoxic T cell degranulation","synonyms":[{"name":"cytotoxic T cell granule exocytosis","type":"exact"},{"name":"cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"cytotoxic T-cell degranulation","type":"exact"},{"name":"cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043316"}


id: PBO:0063985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 19","termid":"PBO:0063985"}


id: MONDO:0008797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia is an extreme developmental dental anomaly characterized by the complete absence of all teeth.","definition_xrefs":["Orphanet:99797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia","secondary_identifiers":["UMLS:C0399352","MedDRA:10002583","ICD9:520.0","MEDGEN:98313","MESH:D000848","GARD:5818","OMIM:206780","SCTID:16958000","icd11.foundation:413433873","ICD10CM:K00.0","DOID:13714"],"synonyms":[{"name":"absence of permanent teeth","type":"related"},{"name":"anodontia of permanent dentition","type":"related"},{"name":"complete absence of teeth","type":"exact"},{"name":"developmental absence of tooth","type":"exact"},{"name":"teeth, permanent, absence of","type":"related"},{"name":"total anodontia of permanent and deciduous teeth","type":"exact"}],"termid":"MONDO:0008797","xrefs":{"Monarch":{"xref_id":"0008797"}}}


id: GO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar part (obsolete GO:0044452)","synonyms":[{"name":"nucleolus component","type":"exact"}],"termid":"GO:0044452"}


id: PBO:0048965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1","termid":"PBO:0048965"}


id: GO:1904027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of collagen fibril organization.","definition_xrefs":["GO_REF:0000058","PMID:25451920","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"is_a","term_name":"regulation of collagen fibril organization","termid":"GO:1904026"},{"relation_name":"negatively_regulates","term_name":"collagen fibril organization","termid":"GO:0030199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen fibril organization","synonyms":[{"name":"down regulation of collagen fibril organisation","type":"exact"},{"name":"down regulation of collagen fibril organization","type":"exact"},{"name":"down regulation of fibrillar collagen organization","type":"exact"},{"name":"down-regulation of collagen fibril organisation","type":"exact"},{"name":"down-regulation of collagen fibril organization","type":"exact"},{"name":"down-regulation of fibrillar collagen organization","type":"exact"},{"name":"downregulation of collagen fibril organisation","type":"exact"},{"name":"downregulation of collagen fibril organization","type":"exact"},{"name":"downregulation of fibrillar collagen organization","type":"exact"},{"name":"inhibition of collagen fibril organisation","type":"narrow"},{"name":"inhibition of collagen fibril organization","type":"narrow"},{"name":"inhibition of fibrillar collagen organization","type":"narrow"},{"name":"negative regulation of collagen fibril organisation","type":"exact"},{"name":"negative regulation of fibrillar collagen organization","type":"exact"}],"termid":"GO:1904027"}


id: MONDO:0014940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset","secondary_identifiers":["UMLS:C4310693","OMIM:617145","MEDGEN:934660","DOID:0081364"],"synonyms":[{"name":"NADGP","type":"exact"},{"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset","type":"exact"},{"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset; NADGP","type":"exact"}],"termid":"MONDO:0014940","xrefs":{"Monarch":{"xref_id":"0014940"}}}


id: GO:0046341
data:
  {"annotated_genes":["SJAG_00426","SJAG_03563","SJAG_00168","SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81855,121538,115027,116695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate. It is a common intermediate in phospholipid biosynthesis.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol metabolism","type":"exact"}],"termid":"GO:0046341","terms_by_termid":{"GO:0016024":null}}


id: GO:1990616
data:
  {"annotated_genes":["SJAG_02484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77365],"is_not":false,"summary":null,"term":"GO:1990616"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium ions out of mitochondrial matrix into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:25585246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial magnesium ion transmembrane transport","termid":"GO:0045016"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"magnesium ion export from mitochondrion","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"magnesium ion efflux from mitochondrion","type":"exact"}],"termid":"GO:1990616","terms_by_termid":{"GO:1990616":null}}


id: MONDO:0015711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete specific antibody deficiency with normal immunoglobulin concentrations and normal numbers of B cells (obsolete MONDO:0015711)","secondary_identifiers":["NANDO:1200348","NANDO:2200721","Orphanet:169443","icd11.foundation:29897844"],"termid":"MONDO:0015711","xrefs":{"Monarch":{"xref_id":"0015711"}}}


id: GO:0031845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 neuropeptide Y receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 5 neuropeptide Y receptor binding","synonyms":[{"name":"type 5 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031845"}


id: PBO:0039592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 9","termid":"PBO:0039592"}


id: FYPO:0006160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates is lower than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:16532353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Rad51 foci during meiotic prophase I","synonyms":[{"name":"decreased number of Rad51 foci during prophase I","type":"exact"},{"name":"reduced number of Rad51 foci during prophase I","type":"exact"}],"termid":"FYPO:0006160"}


id: PBO:0091183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf307","termid":"PBO:0091183"}


id: PBO:0004268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic phosphate transporter (predicted)","termid":"PBO:0004268"}


id: FYPO:0004213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000138","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"abnormal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004213"}


id: MONDO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the spinal cord.","definition_xrefs":["NCIT:C3875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"ependymal tumor of spinal cord","termid":"MONDO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord ependymoma","secondary_identifiers":["MEDGEN:65968","SCTID:254949006","UMLS:C0238432","MONDO:0021544","DOID:5503"],"synonyms":[{"name":"ependymal neoplasm of the spinal cord","type":"exact"},{"name":"ependymoma of spinal cord","type":"exact"},{"name":"ependymoma of the spinal cord","type":"exact"},{"name":"spinal cord ependymoma","type":"exact"}],"termid":"MONDO:0003473","xrefs":{"Monarch":{"xref_id":"0003473"}}}


id: FYPO:0001468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases abnormally, or does not change, following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus","synonyms":[{"name":"abnormal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"abnormal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"abnormal steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001468"}


id: PBO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-I ortholog Mis6","termid":"PBO:0025431"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: MONDO:0015083
data:
  {"annotated_genes":["SJAG_01114","SJAG_04522","SJAG_04765","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87208,87207,87206,87205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"nuclear oculomotor paralysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:100932"],"termid":"MONDO:0015083","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0015083"}}}


id: FYPO:0007962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after nitrogen removal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency during nitrogen starvation","termid":"FYPO:0007962"}


id: GO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the aortic bodies.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003033"}


id: PBO:0076509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 9","termid":"PBO:0076509"}


id: PR:P62505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P62505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.16","synonyms":[{"name":"Spom972h-dad3","type":"exact"},{"name":"outer kinetochore protein dad3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P62505"}


id: MONDO:0007800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 18p refers to a chromosomal disorder resulting from the deletion of all or part of the short arm of chromosome 18.","definition_xrefs":["Orphanet:1598"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 18","termid":"MONDO:0016880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18p deletion syndrome","secondary_identifiers":["UMLS:C0432442","DOID:0060406","MEDGEN:96604","OMIM:146390","icd11.foundation:121037615","Orphanet:261974","NCIT:C84521","GARD:8631","ICD9:758.39","SCTID:270890001","MESH:C538309"],"synonyms":[{"name":"18p syndrome","type":"exact"},{"name":"18p-","type":"exact"},{"name":"De Grouchy syndrome","type":"exact"},{"name":"chromosome 18p deletion","type":"exact"},{"name":"chromosome 18p deletion syndrome","type":"exact"},{"name":"deletion 18p syndrome","type":"exact"},{"name":"monosomy 18p","type":"exact"},{"name":"monosomy type 18p","type":"exact"},{"name":"partial deletion of chromosome 18p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 18","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 18","type":"exact"},{"name":"partial monosomy of chromosome 18p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 18","type":"exact"}],"termid":"MONDO:0007800","xrefs":{"Monarch":{"xref_id":"0007800"}}}


id: GO:0090498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a Golgi membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["PMID:21337012","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of Golgi membrane","synonyms":[{"name":"extrinsic to Golgi membrane","type":"narrow"}],"termid":"GO:0090498"}


id: PBO:0086970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of acetolactate synthase; acetolactate synthase catalyzes the first step of branched-chain amino acid biosynthesis; enhances activity of the Ilv2p catalytic subunit, localizes to mitochondria","termid":"PBO:0086970"}


id: GO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the hollowing out of an epithelial rod or cord to form the central hole in a tube.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in tube lumen cavitation","synonyms":[{"name":"apoptosis involved in tube lumen cavitation","type":"narrow"}],"termid":"GO:0060609"}


id: FYPO:0007270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such regions containing transposons (Tf2 elements) are tethered to the centromere to a lower extent than normal.","definition_xrefs":["PMID:23084836","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased Tf body tethering to centromere","synonyms":[{"name":"decreased Tf body tethering to centromere during mitotic cell cycle","type":"related"},{"name":"decreased Tf body tethering to centromere during vegetative growth","type":"exact"},{"name":"decreased Tf2 body tethering to centromere","type":"exact"},{"name":"decreased centromere tethering of Tf2 bodies","type":"exact"},{"name":"reduced Tf body tethering to centromere","type":"exact"}],"termid":"FYPO:0007270"}


id: PBO:0090002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13","termid":"PBO:0090002"}


id: PATO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing two sides that are at the same continuous distance relative to each other.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallel-sided","termid":"PATO:0002485"}


id: PBO:0039000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin filament associated protein 1 like 1","termid":"PBO:0039000"}


id: PBO:0052075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1","termid":"PBO:0052075"}


id: FYPO:0002427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable spore with abnormal shape","synonyms":[{"name":"lethal; spore with abnormal shape","type":"exact"}],"termid":"FYPO:0002427"}


id: PBO:0071967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A6","termid":"PBO:0071967"}


id: MONDO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-speech impairment-severe cognitive delay syndrome (obsolete MONDO:0018297)","termid":"MONDO:0018297","xrefs":{"Monarch":{"xref_id":"0018297"}}}


id: PBO:0077807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4 pseudogene 1","termid":"PBO:0077807"}


id: PBO:0066163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBFA downstream neighbor","termid":"PBO:0066163"}


id: MOD:00368
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-carboxy-L-methionine.","definition_xrefs":["Unimod:299#M","RESID:AA0363","PubMed:12595263","PubMed:11120890","PubMed:8312270","PubMed:10368287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-methionine","synonyms":[{"name":"(S)-2-carboxyamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-carbamic-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-carbamic-4-(methylthio)butanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"N-carboxy-L-methionine","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:00368"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: GO:0048300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgD isotypes","termid":"GO:0048299"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgD isotypes","synonyms":[{"name":"down regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgD isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgD isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"negative regulation of class switching to IgD isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgD isotypes","type":"exact"}],"termid":"GO:0048300"}


id: MONDO:0040500
data:
  {"annotated_genes":["SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86914],"is_not":false,"summary":null,"term":"MONDO:0040500"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002525","MONDO:0006025","MONDO:0037792","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22577","OMIM:617816","DOID:0081223","MEDGEN:1628197","UMLS:C4540521"],"synonyms":[{"name":"GPIBD16","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 16","type":"exact"},{"name":"intellectual disability, autosomal recessive 62","type":"related"},{"name":"mental retardation, autosomal recessive 62","type":"related"}],"termid":"MONDO:0040500","terms_by_termid":{"MONDO:0040500":null},"xrefs":{"Monarch":{"xref_id":"0040500"}}}


id: PBO:0081559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 483","termid":"PBO:0081559"}


id: RO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x actively participates in y if and only if x participates in y and x realizes some active role","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actively_participates_in","termid":"RO:0002217"}


id: GO:0102071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-epoxy-18-hydroxystearate + H2O = 9,10,18-trihydroxystearate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-epoxy-18-hydroxystearate hydrolase activity (obsolete GO:0102071)","termid":"GO:0102071"}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: GO:0071965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotion in a multicellular organism, i.e. self-propelled movement of a multicellular organism from one location to another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal locomotion","termid":"GO:0071965"}


id: MONDO:0013590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Stickler syndrome in which the cause of the disease is a mutation in the COL9A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome","termid":"MONDO:0019354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"Stickler syndrome, type 4","secondary_identifiers":["OMIM:614134","UMLS:C3279941","MEDGEN:481571","GARD:18358"],"synonyms":[{"name":"COL9A1 autosomal recessive Stickler syndrome","type":"exact"},{"name":"STICKLER syndrome, type IV","type":"related"},{"name":"STL4","type":"related"},{"name":"autosomal recessive Stickler syndrome caused by mutation in COL9A1","type":"exact"}],"termid":"MONDO:0013590","xrefs":{"Monarch":{"xref_id":"0013590"}}}


id: GO:1904235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["GOC:TermGenie","PMID:25834989","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904235"}


id: GO:0015990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons against an electrochemical gradient, using energy from electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"electron transport coupled proton transport","termid":"GO:0015990"}


id: PBO:0039400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 5","termid":"PBO:0039400"}


id: MOD:00671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acylated residue","synonyms":[{"name":"OAcylRes","type":"exact"}],"termid":"MOD:00671"}


id: GO:0038031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, where the signal is passed on via the JNK cascade.","definition_xrefs":["PMID:19137009","PMID:20032469","GOC:BHF","GPC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:0038031)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:0038031"}


id: PBO:0054700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2109","termid":"PBO:0054700"}


id: GO:0071159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression.","definition_xrefs":["ISBN:0849327946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"NF-kappaB complex","termid":"GO:0071159"}


id: PBO:0110169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110169"}


id: GO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipoprotein lipid oxidation. Lipoprotein lipid oxidation is the modification of a lipoprotein by oxidation of the lipid group.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipoprotein oxidation","termid":"GO:0034443"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipoprotein lipid oxidation","termid":"GO:0060587"},{"relation_name":"negatively_regulates","term_name":"lipoprotein lipid oxidation","termid":"GO:0034439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipid oxidation","termid":"GO:0060588"}


id: PR:Q9P329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: pfl6/SPBC1348.08c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C1348.08c/C977.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.08c","synonyms":[{"name":"Spom972h-SPBC1348.08c","type":"exact"}],"termid":"PR:Q9P329"}


id: PBO:0040868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bcl2 modifying factor","termid":"PBO:0040868"}


id: GO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins.","definition_xrefs":["GOC:krc","PMID:19501669","GOC:cilia","ISBN:0824072820","GOC:pde","PMID:26574505","PMID:6771304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"photoreceptor cell cilium","termid":"GO:0097733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor outer segment","termid":"GO:0001750"}


id: GO:1902010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:10882126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"down regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"down regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"down regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of protein biosynthetic process involved in ER stress response","type":"narrow"},{"name":"inhibition of protein biosynthetic process involved in response to ER stress","type":"narrow"},{"name":"inhibition of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of protein anabolism involved in ER stress response","type":"exact"},{"name":"negative regulation of protein anabolism involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein anabolism involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in ER stress response","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein formation involved in ER stress response","type":"exact"},{"name":"negative regulation of protein formation involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein formation involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein synthesis involved in ER stress response","type":"exact"},{"name":"negative regulation of protein synthesis involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein synthesis involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of translation involved in ER stress response","type":"exact"},{"name":"negative regulation of translation involved in response to ER stress","type":"exact"},{"name":"protein biosynthesis inhibitor activity involved in ER stress response","type":"related"},{"name":"protein biosynthesis inhibitor activity involved in response to ER stress","type":"related"},{"name":"protein biosynthesis inhibitor activity involved in response to endoplasmic reticulum stress","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in ER stress response","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in response to ER stress","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in response to endoplasmic reticulum stress","type":"related"}],"termid":"GO:1902010"}


id: PBO:0086089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; involved in downregulation of the unfolded protein response (UPR), at least in part through dephosphorylation of Ire1p; dosage-dependent positive regulator of the G1/S phase transition through control of the timing of START; physically interacts with, dephosphorylates and destabilizes Sic1p; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0086089"}


id: MONDO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of mitochondrial genome maintenance.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA maintenance syndrome","secondary_identifiers":["GARD:21520","MEDGEN:1826064","UMLS:C5679930","Orphanet:352456"],"synonyms":[{"name":"inborn error of mitochondrial genome maintenance","type":"exact"},{"name":"inborn mitochondrial genome maintenance disorder","type":"exact"},{"name":"mtDNA maintenance syndrome","type":"exact"},{"name":"rare inborn error of mitochondrial genome maintenance","type":"exact"}],"termid":"MONDO:0018121","xrefs":{"Monarch":{"xref_id":"0018121"}}}


id: PBO:0062855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otolin 1","termid":"PBO:0062855"}


id: PBO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase (predicted)","termid":"PBO:0001620"}


id: PBO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC82 ortholog","termid":"PBO:0036279"}


id: FYPO:0001270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the separation of chromosomes into two distinct unequal masses, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0001985"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"complete but unequal mitotic chromosome segregation","type":"exact"},{"name":"complete but unequal mitotic sister chromatid separation","type":"related"},{"name":"complete but unequal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"complete but unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001270"}


id: MONDO:1011460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in degu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, degu","secondary_identifiers":["OMIA:000033-10160"],"termid":"MONDO:1011460","xrefs":{"Monarch":{"xref_id":"1011460"}}}


id: MONDO:0957278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 20","secondary_identifiers":["UMLS:C5830539","MEDGEN:1841175","OMIM:620383"],"termid":"MONDO:0957278","xrefs":{"Monarch":{"xref_id":"0957278"}}}


id: PBO:0062847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteocrin","termid":"PBO:0062847"}


id: PBO:0030067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_gluconate_carbon_source","termid":"PBO:0030067"}


id: MONDO:0032655
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88105],"is_not":false,"summary":null,"term":"MONDO:0032655"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"is_obsolete":false,"name":"visual impairment and progressive phthisis bulbi","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070356","MEDGEN:1648430","UMLS:C4748978","OMIM:618283"],"synonyms":[{"name":"VIPB","type":"related"},{"name":"VISUAL IMPAIRMENT AND PROGRESSIVE PHTHISIS BULBI","type":"related"}],"termid":"MONDO:0032655","terms_by_termid":{"MONDO:0032655":null},"xrefs":{"Monarch":{"xref_id":"0032655"}}}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["GOC:sjp","PMID:19730411","GOC:pr","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: PBO:0054984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2398","termid":"PBO:0054984"}


id: MONDO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PTEN hamartoma tumor syndrome (obsolete MONDO:0000900)","termid":"MONDO:0000900","xrefs":{"Monarch":{"xref_id":"0000900"}}}


id: GO:0102051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-tryptophan + ATP(4-) = H+ + indole-3-acetyl-tryptophan + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-tryptophan synthetase activity (obsolete GO:0102051)","termid":"GO:0102051"}


id: MONDO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, Czarny-Ratajczak type","secondary_identifiers":["GARD:21587","Orphanet:370019"],"termid":"MONDO:0018255","xrefs":{"Monarch":{"xref_id":"0018255"}}}


id: PBO:0076238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 1","termid":"PBO:0076238"}


id: MONDO:0013652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any narcolepsy in which the cause of the disease is a mutation in the MOG gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy-cataplexy syndrome","termid":"MONDO:0016158"},{"relation_name":"is_a","term_name":"hereditary narcolepsy","termid":"MONDO:0100554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy 7","secondary_identifiers":["UMLS:C3280266","GARD:15783","MEDGEN:481896","OMIM:614250"],"synonyms":[{"name":"MOG narcolepsy","type":"exact"},{"name":"NRCLP7","type":"related"},{"name":"narcolepsy 7","type":"exact"},{"name":"narcolepsy caused by mutation in MOG","type":"exact"},{"name":"narcolepsy type 7","type":"exact"}],"termid":"MONDO:0013652","xrefs":{"Monarch":{"xref_id":"0013652"}}}


id: MONDO:0006366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polyp that arises from the stomach and is characterized by the presence of smooth muscle branching bands, and hyperplasia with cystic dilatation of the foveolar epithelium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Peutz-Jeghers syndrome","termid":"MONDO:0008280"},{"relation_name":"is_a","term_name":"gastric hamartomatous polyp","termid":"MONDO:0006224"},{"relation_name":"is_a","term_name":"Peutz-Jeghers polyp","termid":"MONDO:0006365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Peutz-Jeghers polyp of the stomach","secondary_identifiers":["MEDGEN:233323","NCIT:C36205","UMLS:C1335398"],"synonyms":[{"name":"Gastric Peutz-Jeghers polyp","type":"exact"}],"termid":"MONDO:0006366","xrefs":{"Monarch":{"xref_id":"0006366"}}}


id: PBO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism (predicted)","termid":"PBO:0017565"}


id: PBO:0065554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 3","termid":"PBO:0065554"}


id: PBO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44 like","termid":"PBO:0050906"}


id: GO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting in cell death or dysfunction mediated by activation of the classical complement pathway or induction of effector cell phagocytosis, cytolysis mechanisms via complement or Fc receptors following the binding of antibodies to cell surface antigens on a target cell, or mediated by the direct binding of antibody to cellular receptors.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type II hypersensitivity","secondary_identifiers":["Wikipedia:Type_II_hypersensitivity"],"termid":"GO:0002445"}


id: MONDO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the stomach. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5696"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete gastrointestinal neuroendocrine benign tumor (obsolete MONDO:0002891)","termid":"MONDO:0002891"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine neoplasm","termid":"MONDO:0024503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine neoplasm","secondary_identifiers":["SCTID:721194008","GARD:19750","UMLS:C1333783","Orphanet:100075","DOID:4715","MEDGEN:232548"],"synonyms":[{"name":"NET of stomach","type":"exact"},{"name":"gastric neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine neoplasm of stomach","type":"exact"},{"name":"neuroendocrine neoplasm of the stomach","type":"exact"},{"name":"neuroendocrine tumor of stomach","type":"related"},{"name":"neuroendocrine tumor of the stomach","type":"exact"},{"name":"neuroendocrine tumour of stomach","type":"related"},{"name":"neuroendocrine tumour of the stomach","type":"exact"},{"name":"stomach NET","type":"exact"},{"name":"stomach neuroendocrine neoplasm","type":"exact"},{"name":"stomach neuroendocrine tumor","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"stomach neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003111","xrefs":{"Monarch":{"xref_id":"0003111"}}}


id: PBO:0078573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51G","termid":"PBO:0078573"}


id: FYPO:0005787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a normal (i.e. indistinguishable from wild type) distance from the break site. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PomBase:mah","GO:0000729","PMID:27729451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal spatial extent of double-strand break processing","synonyms":[{"name":"normal spatial extent of DSB processing","type":"exact"},{"name":"normal spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"normal spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0005787"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: MONDO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prenatal onset growth disorder with multiorgan manifestations.","definition_xrefs":["Orphanet:2576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"disorder of defective peroxisome oxidative status","termid":"MONDO:0100306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"mulibrey nanism","secondary_identifiers":["MEDGEN:99347","MESH:D050336","NORD:1465","ICD9:759.89","NCIT:C84906","OMIM:253250","SCTID:81604003","GARD:95","UMLS:C0524582","DOID:0050436","icd11.foundation:1167260635"],"synonyms":[{"name":"MUL","type":"exact"},{"name":"Perheentupa syndrome","type":"exact"},{"name":"mulibrey dwarfism","type":"exact"},{"name":"mulibrey nanism","type":"exact"},{"name":"muscle-liver-brain-eye nanism","type":"exact"},{"name":"pericardial constriction and Growth failure","type":"related"},{"name":"pericardial constriction and growth failure","type":"exact"},{"name":"pericardial constriction-growth failure syndrome","type":"exact"}],"termid":"MONDO:0009664","xrefs":{"Monarch":{"xref_id":"0009664"}}}


id: SO:0001313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_N6_2prime_O_trimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_N6_2_prime_O_trimethyladenosine","secondary_identifiers":["RNAMOD:089"],"synonyms":[{"name":"N6,N6,2'-O-trimethyladenosine","type":"exact"},{"name":"m62Am","type":"exact"}],"termid":"SO:0001313"}


id: PBO:0071010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 12","termid":"PBO:0071010"}


id: GO:1900396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kojic acid biosynthetic process","termid":"GO:1900394"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of kojic acid biosynthetic process","synonyms":[{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"activation of C6H6O4 anabolism","type":"related"},{"name":"activation of C6H6O4 biosynthesis","type":"related"},{"name":"activation of C6H6O4 biosynthetic process","type":"related"},{"name":"activation of C6H6O4 formation","type":"related"},{"name":"activation of C6H6O4 synthesis","type":"related"},{"name":"activation of kojic acid anabolism","type":"exact"},{"name":"activation of kojic acid biosynthesis","type":"exact"},{"name":"activation of kojic acid biosynthetic process","type":"narrow"},{"name":"activation of kojic acid formation","type":"exact"},{"name":"activation of kojic acid synthesis","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"positive regulation of C6H6O4 anabolism","type":"related"},{"name":"positive regulation of C6H6O4 biosynthesis","type":"related"},{"name":"positive regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"positive regulation of C6H6O4 formation","type":"related"},{"name":"positive regulation of C6H6O4 synthesis","type":"related"},{"name":"positive regulation of kojic acid anabolism","type":"exact"},{"name":"positive regulation of kojic acid biosynthesis","type":"exact"},{"name":"positive regulation of kojic acid formation","type":"exact"},{"name":"positive regulation of kojic acid synthesis","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"up regulation of C6H6O4 anabolism","type":"related"},{"name":"up regulation of C6H6O4 biosynthesis","type":"related"},{"name":"up regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"up regulation of C6H6O4 formation","type":"related"},{"name":"up regulation of C6H6O4 synthesis","type":"related"},{"name":"up regulation of kojic acid anabolism","type":"exact"},{"name":"up regulation of kojic acid biosynthesis","type":"exact"},{"name":"up regulation of kojic acid biosynthetic process","type":"exact"},{"name":"up regulation of kojic acid formation","type":"exact"},{"name":"up regulation of kojic acid synthesis","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"up-regulation of C6H6O4 anabolism","type":"related"},{"name":"up-regulation of C6H6O4 biosynthesis","type":"related"},{"name":"up-regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"up-regulation of C6H6O4 formation","type":"related"},{"name":"up-regulation of C6H6O4 synthesis","type":"related"},{"name":"up-regulation of kojic acid anabolism","type":"exact"},{"name":"up-regulation of kojic acid biosynthesis","type":"exact"},{"name":"up-regulation of kojic acid biosynthetic process","type":"exact"},{"name":"up-regulation of kojic acid formation","type":"exact"},{"name":"up-regulation of kojic acid synthesis","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"upregulation of C6H6O4 anabolism","type":"related"},{"name":"upregulation of C6H6O4 biosynthesis","type":"related"},{"name":"upregulation of C6H6O4 biosynthetic process","type":"related"},{"name":"upregulation of C6H6O4 formation","type":"related"},{"name":"upregulation of C6H6O4 synthesis","type":"related"},{"name":"upregulation of kojic acid anabolism","type":"exact"},{"name":"upregulation of kojic acid biosynthesis","type":"exact"},{"name":"upregulation of kojic acid biosynthetic process","type":"exact"},{"name":"upregulation of kojic acid formation","type":"exact"},{"name":"upregulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900396"}


id: PBO:0029585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_catabolic_process_during_vegetative_growth","termid":"PBO:0029585"}


id: PBO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb6","termid":"PBO:0002857"}


id: PBO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30, NatC catalytic subunit","termid":"PBO:0060409"}


id: GO:0031403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lithium ion (Li+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lithium ion binding","synonyms":[{"name":"Li+ ion binding","type":"exact"}],"termid":"GO:0031403"}


id: MONDO:0004761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urethral diverticulum (obsolete MONDO:0004761)","secondary_identifiers":["DOID:9341","ICD9:599.2"],"synonyms":[{"name":"obsolete urethral diverticulum (disease)","type":"exact"}],"termid":"MONDO:0004761","xrefs":{"Monarch":{"xref_id":"0004761"}}}


id: GO:0110072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in contraction of the apical end of a polarized columnar epithelial cell, contributing to formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction involved in gastrulation","termid":"GO:0003384"},{"relation_name":"part_of","term_name":"ventral furrow formation","termid":"GO:0007370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}


id: GO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"},{"relation_name":"negatively_regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte antigen processing and presentation","synonyms":[{"name":"down regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"down-regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"downregulation of monocyte antigen processing and presentation","type":"exact"},{"name":"inhibition of monocyte antigen processing and presentation","type":"narrow"}],"termid":"GO:0002614"}


id: GO:0098996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell capsule to allow entry into the host cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell glycocalyx","secondary_identifiers":["VZ:3938"],"synonyms":[{"name":"catabolism of host glycocalyx during viral entry","type":"exact"},{"name":"degradation of host capsule during virus entry","type":"exact"},{"name":"degradation of host glycocalyx during viral entry","type":"exact"},{"name":"disassembly of glycocalyx during viral entry","type":"exact"},{"name":"disruption of host cell glycocalyx during viral entry","type":"exact"},{"name":"symbiont entry into host cell by disruption of host cell capsule","type":"exact"}],"termid":"GO:0098996"}


id: PBO:0072830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sin3A associated protein 18","termid":"PBO:0072830"}


id: PBO:0116621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1","termid":"PBO:0116621"}


id: PBO:0007992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A, intrinsic regulator Rrd1 (predicted)","termid":"PBO:0007992"}


id: MONDO:0020473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dappled diaphyseal dysplasia","secondary_identifiers":["icd11.foundation:2067032637","MEDGEN:468529","Orphanet:99645","UMLS:C1300227","SCTID:389262009","ICD9:756.59"],"termid":"MONDO:0020473","xrefs":{"Monarch":{"xref_id":"0020473"}}}


id: PR:O59726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fnx2 gene.","definition_xrefs":["UniProtKB:O59726","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter fnx2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.06c","synonyms":[{"name":"Spom972h-fnx2","type":"exact"}],"termid":"PR:O59726"}


id: GO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the nuclear membrane during meiosis II.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane reassembly","termid":"GO:0051333"},{"relation_name":"part_of","term_name":"meiosis II","termid":"GO:0007135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0044085","GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"meiosis II nuclear membrane reassembly","synonyms":[{"name":"meiosis II nuclear envelope reassembly","type":"related"}],"termid":"GO:0051335"}


id: GO:0032827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell differentiation","termid":"GO:0032824"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation involved in immune response","termid":"GO:0032826"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"down regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"down-regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"downregulation of natural killer cell differentiation during immune response","type":"related"},{"name":"inhibition of natural killer cell differentiation during immune response","type":"narrow"},{"name":"negative regulation of NK cell differentiation during immune response","type":"related"},{"name":"negative regulation of natural killer cell development involved in immune response","type":"related"},{"name":"negative regulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032827"}


id: PBO:0089603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Sck1","termid":"PBO:0089603"}


id: PBO:0067137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 185, pseudogene","termid":"PBO:0067137"}


id: PBO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0002526"}


id: GO:0050790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an enzyme.","definition_xrefs":["GOC:ebc","GOC:vw","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of catalytic activity","secondary_identifiers":["GO:0048552"],"synonyms":[{"name":"regulation of enzyme activity","type":"exact"},{"name":"regulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0050790"}


id: PBO:0056125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 2","termid":"PBO:0056125"}


id: PBO:0081246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 17","termid":"PBO:0081246"}


id: GO:0046084
data:
  {"annotated_genes":["SJAG_01814","SJAG_03140","SJAG_02364","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72521,112357,119384],"is_not":false,"summary":null,"term":"GO:0046084"},{"annotations":[75705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"adenine metabolic process","termid":"GO:0046083"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"adenine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"adenine anabolism","type":"exact"},{"name":"adenine biosynthesis","type":"exact"},{"name":"adenine formation","type":"exact"},{"name":"adenine synthesis","type":"exact"}],"termid":"GO:0046084","terms_by_termid":{"GO:0006168":null,"GO:0046084":null}}


id: PBO:0057863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3174","termid":"PBO:0057863"}


id: GO:0033520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"phytol metabolic process","termid":"GO:0033306"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phytol biosynthetic process","synonyms":[{"name":"phytol anabolism","type":"exact"},{"name":"phytol biosynthesis","type":"exact"},{"name":"phytol formation","type":"exact"},{"name":"phytol synthesis","type":"exact"}],"termid":"GO:0033520"}


id: MONDO:1011067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, domestic guinea pig","secondary_identifiers":["OMIA:001033-10141"],"termid":"MONDO:1011067","xrefs":{"Monarch":{"xref_id":"1011067"}}}


id: PBO:0079660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 8","termid":"PBO:0079660"}


id: MONDO:0014656
data:
  {"annotated_genes":["SJAG_06022"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86958],"is_not":false,"summary":null,"term":"MONDO:0014656"}]},"cv_name":"mondo","definition":"Any progressive external ophthalmoplegia with mitochondrial DNA deletions in which the cause of the disease is a mutation in the RNASEH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"adult-onset chronic progressive external ophthalmoplegia with mitochondrial myopathy","termid":"MONDO:0018002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002320","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616479","GARD:18450","UMLS:C4225312","MEDGEN:901897","DOID:0111515"],"synonyms":[{"name":"PEOB2","type":"related"},{"name":"RNASEH1 progressive external ophthalmoplegia with mitochondrial DNA deletions","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions caused by mutation in RNASEH1","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 2","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 2","type":"related"}],"termid":"MONDO:0014656","terms_by_termid":{"MONDO:0014656":null},"xrefs":{"Monarch":{"xref_id":"0014656"}}}


id: PBO:0082074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5,10-methenyltetrahydrofolate synthetase; involved in folic acid biosynthesis","termid":"PBO:0082074"}


id: MONDO:0013721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 4a deficiency","secondary_identifiers":["OMIM:614380","GARD:15798","MEDGEN:482272","UMLS:C3280642","DOID:0060297","MESH:C565167"],"synonyms":[{"name":"C4A classic complement early component deficiency","type":"exact"},{"name":"C4A deficiency","type":"related"},{"name":"C4AD","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C4A","type":"exact"},{"name":"complement component 4A deficiency","type":"related"},{"name":"complement component 4a deficiency","type":"exact"}],"termid":"MONDO:0013721","xrefs":{"Monarch":{"xref_id":"0013721"}}}


id: MONDO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deeah syndrome","secondary_identifiers":["OMIM:619004","UMLS:C5436579","MEDGEN:1756624"],"synonyms":[{"name":"DEEAH","type":"related"},{"name":"DEEAH SYNDROME","type":"related"},{"name":"Developmental Delay With Endocrine, Exocrine, Autonomic, and Hematologic Abnormalities","type":"related"}],"termid":"MONDO:0033561","xrefs":{"Monarch":{"xref_id":"0033561"}}}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: PATO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"old","termid":"PATO:0000308"}


id: PBO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Cwf23","termid":"PBO:0005175"}


id: GO:0046870
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99288],"is_not":false,"summary":null,"term":"GO:0046870"}]},"cv_name":"molecular_function","definition":"Binding to a cadmium ion (Cd).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cadmium ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cd ion binding","type":"exact"},{"name":"cadmium binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0046870","terms_by_termid":{"GO:0046870":null}}


id: PR:O14308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc4 gene.","definition_xrefs":["UniProtKB:O14308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.13c","synonyms":[{"name":"Spom972h-swc4","type":"exact"}],"termid":"PR:O14308"}


id: PBO:0029399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm","termid":"PBO:0029399"}


id: GO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-ketoglutarate and malate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate/malate transport (obsolete GO:0006840)","synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"exact"},{"name":"mitochondrial oxoglutarate/malate transport","type":"exact"}],"termid":"GO:0006840"}


id: MONDO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in heterozygous mutation in the CRYGC gene on chromosome 2q33.","definition_xrefs":["Orphanet:98984"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cataract","termid":"MONDO:0005129"},{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pulverulent cataract","secondary_identifiers":["icd11.foundation:1046743385","MEDGEN:318793","GARD:16884","Orphanet:98986","MESH:C565133","UMLS:C1833118"],"synonyms":[{"name":"Coppock-like cataract","type":"exact"},{"name":"dusty cataract","type":"exact"},{"name":"pulverulent cataract","type":"exact"}],"termid":"MONDO:0011430","xrefs":{"Monarch":{"xref_id":"0011430"}}}


id: GO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral transcription","synonyms":[{"name":"negative regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043922"}


id: GO:0000372
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100007],"is_not":false,"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","termid":"GO:0000376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group I intron splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000372","terms_by_termid":{"GO:0000372":null}}


id: GO:0060865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand and contributing to the decrease in the rate or frequency of floral organ abscission.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signaling pathway (obsolete GO:0060865)","synonyms":[{"name":"negative regulation of floral organ abscission by transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0060865"}


id: PBO:0071617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 35","termid":"PBO:0071617"}


id: PBO:0061253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 3","termid":"PBO:0061253"}


id: MONDO:0010218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX testicular disorder of sex development","termid":"MONDO:0100249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX sex reversal 2","secondary_identifiers":["OMIM:278850","DOID:0111763","GARD:15249","MEDGEN:411414","UMLS:C2749215"],"synonyms":[{"name":"46,XX SEX reversal 2","type":"related"},{"name":"46,XX Sex reversal type 2","type":"exact"},{"name":"46,XX sex reversal 2","type":"exact"},{"name":"46XX sex reversal 2","type":"exact"},{"name":"SRXX2","type":"related"},{"name":"chromosome 17Q24 Duplication syndrome","type":"related"}],"termid":"MONDO:0010218","xrefs":{"Monarch":{"xref_id":"0010218"}}}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: MONDO:0003669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising from the testis. It is believed that it is derived from the sexually undifferentiated embryonic gonad. Treatment with radiotherapy is highly successful when the tumor is diagnosed in localized stages, which represents the majority of presentations of seminoma.","definition_xrefs":["NCIT:C7328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular pure germ cell tumor","termid":"MONDO:0002874"},{"relation_name":"is_a","term_name":"seminoma","termid":"MONDO:0003001"},{"relation_name":"is_a","term_name":"malignant testicular germ cell tumor","termid":"MONDO:0003510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular seminoma","secondary_identifiers":["HP:0100617","MEDGEN:1790467","EFO:0003101","GARD:4792","UMLS:C5551428","SCTID:255107005","DOID:5842","ICD9:186.9","Orphanet:842"],"synonyms":[{"name":"seminoma of testis","type":"exact"},{"name":"seminoma of the testis","type":"exact"},{"name":"seminoma testis","type":"exact"},{"name":"seminomatous germ cell tumor of testis","type":"exact"},{"name":"seminomatous germ cell tumour of testis","type":"exact"},{"name":"testicular seminoma","type":"exact"},{"name":"testicular seminoma (disease)","type":"exact"},{"name":"testicular seminoma Pure","type":"exact"},{"name":"testicular seminomatous germ cell tumor","type":"exact"},{"name":"testicular seminomatous germ cell tumour","type":"exact"},{"name":"testis seminoma","type":"exact"}],"termid":"MONDO:0003669","xrefs":{"Monarch":{"xref_id":"0003669"}}}


id: GO:0006800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["PMID:12115731","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxygen and reactive oxygen species metabolic process (obsolete GO:0006800)","synonyms":[{"name":"oxygen and AOS metabolism","type":"exact"},{"name":"oxygen and ROI metabolism","type":"exact"},{"name":"oxygen and ROS metabolic process","type":"exact"},{"name":"oxygen and ROS metabolism","type":"exact"},{"name":"oxygen and active oxygen species metabolism","type":"exact"},{"name":"oxygen and reactive oxidative species metabolism","type":"exact"},{"name":"oxygen and reactive oxygen intermediate metabolism","type":"exact"},{"name":"oxygen and reactive oxygen species metabolic process","type":"exact"},{"name":"oxygen and reactive oxygen species metabolism","type":"exact"}],"termid":"GO:0006800"}


id: PBO:0065605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 pseudogene 1","termid":"PBO:0065605"}


id: PBO:0050127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 37","termid":"PBO:0050127"}


id: MONDO:0100246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing migraines with or without aura.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to","secondary_identifiers":["OMIMPS:157300"],"synonyms":[{"name":"migraine with or without aura, susceptibility","type":"exact"},{"name":"migraine with or without aura, susceptibility to","type":"exact"}],"termid":"MONDO:0100246","xrefs":{"Monarch":{"xref_id":"0100246"}}}


id: MONDO:0018709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-hypotonia-movement disorder syndrome","secondary_identifiers":["GARD:12715","MEDGEN:1814468","UMLS:C5681121","Orphanet:457260"],"termid":"MONDO:0018709","xrefs":{"Monarch":{"xref_id":"0018709"}}}


id: GO:0039008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron tubule are generated and organized from an epithelium. A pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron.","definition_xrefs":["ZFA:00001558","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"pronephric nephron morphogenesis","termid":"GO:0039007"},{"relation_name":"part_of","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"}


id: MONDO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypopituitarism is characterized by multiple pituitary hormone deficiency, including somatotroph, thyrotroph, lactotroph, corticotroph or gonadotroph deficiencies, due to mutations of pituitary transcription factors involved in pituitary ontogenesis. Congenital hypopituitarism is rare compared with the high incidence of hypopituitarism induced by pituitary adenomas, transsphenoidal surgery or radiotherapy.","definition_xrefs":["Orphanet:95494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hypopituitarism","termid":"MONDO:0005152"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"combined pituitary hormone deficiencies, genetic form","secondary_identifiers":["GARD:10602","MEDGEN:906592","SCTID:718182008","ICD10CM:E23.0","UMLS:C4273747","OMIMPS:613038"],"synonyms":[{"name":"pituitary hormone deficiency, combined","type":"exact"},{"name":"combined pituitary hormone deficiencies, genetic forms","type":"related"},{"name":"familial congenital hypopituitarism","type":"exact"},{"name":"familial hypopituitarism","type":"related"},{"name":"genetic hypopituitarism","type":"exact"},{"name":"multiple pituitary hormone deficiencies, genetic forms","type":"exact"}],"termid":"MONDO:0013099","xrefs":{"Monarch":{"xref_id":"0013099"}}}


id: MONDO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus carcinoma that occurs during childhood.","definition_xrefs":["NCIT:C124292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"choroid plexus carcinoma","termid":"MONDO:0016718"},{"relation_name":"is_a","term_name":"childhood choroid plexus neoplasm","termid":"MONDO:0024744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood choroid plexus carcinoma","secondary_identifiers":["DOID:3545","MEDGEN:901899","UMLS:C1510426"],"synonyms":[{"name":"childhood choroid plexus cancer","type":"related"},{"name":"childhood choroid plexus carcinoma","type":"exact"},{"name":"childhood choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus carcinoma of childhood","type":"exact"},{"name":"paediatric choroid plexus carcinoma","type":"exact"},{"name":"pediatric choroid plexus carcinoma","type":"exact"}],"termid":"MONDO:0002685","xrefs":{"Monarch":{"xref_id":"0002685"}}}


id: PATO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrophic growth","termid":"PATO:0001494"}


id: PBO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase, VTC complex subunit Vtc2/3 (predicted)","termid":"PBO:0018260"}


id: MONDO:0012581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the P3H1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 8","secondary_identifiers":["OMIM:610915","UMLS:C1970458","DOID:0110336","GARD:10152","MEDGEN:410075","MESH:C536049"],"synonyms":[{"name":"OI type VIII","type":"related"},{"name":"OI, type 8","type":"related"},{"name":"OI8","type":"exact"},{"name":"P3H1 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in P3H1","type":"exact"},{"name":"osteogenesis imperfecta type 8","type":"exact"},{"name":"osteogenesis imperfecta type VIII","type":"exact"},{"name":"osteogenesis imperfecta, type 8","type":"related"},{"name":"osteogenesis imperfecta, type VIII","type":"related"}],"termid":"MONDO:0012581","xrefs":{"Monarch":{"xref_id":"0012581"}}}


id: PBO:0087818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (19 kDa); involved in RNA polymerase II transcription initiation, similar to histone H4 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087818"}


id: GO:0061251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"}


id: GO:0097056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of selenocysteinyl-tRNA(Sec). This process occurs through the following steps: a unique serine-tRNA with a UGA recognizing anticodon is first aminoacylated with serine; this is then phosphorylated by phosphoseryl-tRNA[Ser]Sec kinase; lastly, selenium is swapped for the phosphate on the serine.","definition_xrefs":["GOC:yaf","PMID:15317934"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocysteinyl-tRNA(Sec) biosynthetic process (obsolete GO:0097056)","synonyms":[{"name":"selenocysteinyl-tRNA(Sec) anabolism","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) biosynthesis","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) formation","type":"exact"},{"name":"selenocysteinyl-tRNA(Sec) synthesis","type":"exact"}],"termid":"GO:0097056"}


id: PBO:0064277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H3","termid":"PBO:0064277"}


id: PBO:0062647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 1 (gene/pseudogene)","termid":"PBO:0062647"}


id: PBO:0084158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity tryptophan and tyrosine permease; overexpression confers FK506 and FTY720 resistance","termid":"PBO:0084158"}


id: MONDO:0000571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CD3zeta deficiency (obsolete MONDO:0000571)","termid":"MONDO:0000571","xrefs":{"Monarch":{"xref_id":"0000571"}}}


id: PBO:0086447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosidase involved in ER-associated protein degradation; localizes to the endoplasmic reticulum; sequence similarity with seven-hairpin glycosidase (GH47) family members, such as Mns1p and Mnl1p, that hydrolyze 1,2-linked alpha-D-mannose residues; non-essential gene","termid":"PBO:0086447"}


id: MONDO:0017192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic pheochromocytoma/secreting paraganglioma","termid":"MONDO:0017190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic secreting paraganglioma","secondary_identifiers":["Orphanet:276627"],"termid":"MONDO:0017192","xrefs":{"Monarch":{"xref_id":"0017192"}}}


id: GO:0097092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["PMID:19729090","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyacyltrehalose metabolic process","synonyms":[{"name":"polyacyltrehalose metabolism","type":"exact"}],"termid":"GO:0097092"}


id: MONDO:0016845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 21","termid":"MONDO:0016919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21q22.11q22.12 microdeletion syndrome","secondary_identifiers":["UMLS:C5192593","Orphanet:261323","GARD:20779","MEDGEN:1681958"],"synonyms":[{"name":"21q22.11-q22.12 microdeletion syndrome","type":"exact"},{"name":"Del(21)(q22.11q22.12)","type":"exact"},{"name":"monosomy 21q22.11-q22.12","type":"exact"},{"name":"monosomy 21q22.11q22.12","type":"exact"}],"termid":"MONDO:0016845","xrefs":{"Monarch":{"xref_id":"0016845"}}}


id: GO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues. The structure of this core oligosaccharide appears to be similar in closely related bacterial strains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"part_of","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide core region metabolic process","synonyms":[{"name":"LPS core region metabolic process","type":"exact"},{"name":"lipopolysaccharide core region metabolism","type":"exact"}],"termid":"GO:0046401"}


id: PBO:0005886
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cob intron","termid":"PBO:0005886"}


id: GO:0061781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin unloading (obsolete GO:0061781)","termid":"GO:0061781"}


id: PBO:0029560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Calcofluor_White","termid":"PBO:0029560"}


id: MONDO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade, and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the colon. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"colon neuroendocrine neoplasm","termid":"MONDO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon small cell neuroendocrine carcinoma","secondary_identifiers":["DOID:6727","UMLS:C1333099","MEDGEN:232087"],"synonyms":[{"name":"Oat cell carcinoma of colon","type":"exact"},{"name":"Oat cell carcinoma of the colon","type":"exact"},{"name":"Oat cell colon carcinoma","type":"exact"},{"name":"colon Oat cell carcinoma","type":"exact"},{"name":"colon small cell carcinoma","type":"exact"},{"name":"colon small cell neuroendocrine cancer","type":"exact"},{"name":"colon small cell neuroendocrine carcinoma","type":"exact"},{"name":"colonic Oat cell carcinoma","type":"exact"},{"name":"colonic small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of colon","type":"exact"},{"name":"small cell carcinoma of the colon","type":"exact"},{"name":"small cell colon carcinoma","type":"exact"}],"termid":"MONDO:0003978","xrefs":{"Monarch":{"xref_id":"0003978"}}}


id: FYECO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature followed by growth at low temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to low","termid":"FYECO:0000294"}


id: PBO:0011167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011167"}


id: PBO:0069483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 750, pseudogene","termid":"PBO:0069483"}


id: MONDO:0024624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A degenerative disorder that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete atrophy of lacrimal gland (obsolete MONDO:0024624)","secondary_identifiers":["SCTID:91951001"],"synonyms":[{"name":"atrophy of lacrimal gland","type":"exact"},{"name":"degenerative disorder of lacrimal gland","type":"exact"},{"name":"lacrimal atrophy","type":"related"},{"name":"lacrimal gland degenerative disorder","type":"exact"}],"termid":"MONDO:0024624","xrefs":{"Monarch":{"xref_id":"0024624"}}}


id: GO:0060836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a venous blood vessel endothelial cell acquires specialized features of a lymphatic vessel endothelial cell, a thin flattened cell that lines the inside surfaces of lymph vessels.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"},{"relation_name":"part_of","term_name":"lymph vessel development","termid":"GO:0001945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic endothelial cell differentiation","termid":"GO:0060836"}


id: PBO:0024809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_influences","termid":"PBO:0024809"}


id: PBO:0016916
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0016916"}


id: GO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte residing in the forebrain. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:cls","GOC:dgh","PMID:16226447","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte differentiation","termid":"GO:0021896"}


id: MONDO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a occipital lobe.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital lobe neoplasm","secondary_identifiers":["UMLS:C1263889","DOID:910","NCIT:C5574","ICD9:191.4","SCTID:126957005","ICD10CM:C71.4","MEDGEN:220389"],"synonyms":[{"name":"malignant neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of the occipital lobe","type":"exact"},{"name":"occipital lobe neoplasm","type":"exact"},{"name":"occipital lobe neoplasm (disease)","type":"exact"},{"name":"occipital lobe tumor","type":"exact"},{"name":"occipital lobe tumour","type":"exact"},{"name":"tumor of occipital lobe","type":"exact"},{"name":"tumor of the occipital lobe","type":"exact"},{"name":"tumour of occipital lobe","type":"exact"},{"name":"tumour of the occipital lobe","type":"exact"}],"termid":"MONDO:0004709","xrefs":{"Monarch":{"xref_id":"0004709"}}}


id: MONDO:0020192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of lacrimal apparatus disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare lacrimal system disease (obsolete MONDO:0020192)","secondary_identifiers":["Orphanet:98602"],"synonyms":[{"name":"rare lacrimal apparatus disease","type":"exact"}],"termid":"MONDO:0020192","xrefs":{"Monarch":{"xref_id":"0020192"}}}


id: GO:0097432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hippocampal pyramidal neuron, a pyramidal cell of the hippocampus.","definition_xrefs":["PMID:19342486","CL:1001571","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"},{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampal pyramidal neuron differentiation","termid":"GO:0097432"}


id: GO:0030843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"negatively_regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate filament depolymerization","synonyms":[{"name":"down regulation of intermediate filament depolymerization","type":"exact"},{"name":"down-regulation of intermediate filament depolymerization","type":"exact"},{"name":"downregulation of intermediate filament depolymerization","type":"exact"},{"name":"inhibition of intermediate filament depolymerization","type":"narrow"},{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030843"}


id: PBO:0084464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase of the HOG signaling pathway; activated under severe osmotic stress; mitophagy-specific regulator; plays a role in regulating Ty1 transposition","termid":"PBO:0084464"}


id: PBO:0017066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111 (predicted)","termid":"PBO:0017066"}


id: PR:Q9P6M0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.06c","synonyms":[{"name":"Spom972h-slx4","type":"exact"},{"name":"synthetic lethal of unknown function protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6M0"}


id: PBO:0003536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotate phosphoribosyltransferase Ura5","termid":"PBO:0003536"}


id: GO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + formaldehyde = glyceraldehyde 3-phosphate + glycerone.","definition_xrefs":["EC:2.2.1.3","MetaCyc:FORMALDEHYDE-TRANSKETOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016744","GO:0016740"],"is_obsolete":false,"name":"formaldehyde transketolase activity","secondary_identifiers":["RHEA:24264"],"synonyms":[{"name":"D-xylulose-5-phosphate:formaldehyde glycolaldehydetransferase activity","type":"related"},{"name":"DHAS activity","type":"related"},{"name":"dihydroxyacetone synthase activity","type":"related"},{"name":"glycerone synthase activity","type":"related"}],"termid":"GO:0047896"}


id: MONDO:0005976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial infection caused by the spirochete Treponema pallidum. It is a sexually transmitted disorder, although it can also be transmitted from the mother to the fetus in utero. Typically, it is initially manifested with a single sore which heals without treatment. If the infection is left untreated, the initial stage is followed by skin rash and mucous membrane lesions. A late stage follows, which is characterized by damage of the internal organs, including the nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syphilis","secondary_identifiers":["NCIT:C35055","DOID:4166","MESH:D013587","UMLS:C0039128","EFO:0007504","MedDRA:10062120","SCTID:76272004","MEDGEN:21447","ICD9:097.9","icd11.foundation:455894495"],"synonyms":[{"name":"Treponema pallidum caused disease or disorder","type":"exact"},{"name":"Treponema pallidum disease or disorder","type":"exact"},{"name":"Treponema pallidum infectious disease","type":"exact"},{"name":"syphilitic chancre","type":"exact"}],"termid":"MONDO:0005976","xrefs":{"Monarch":{"xref_id":"0005976"}}}


id: GO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lyxose = D-xylulose.","definition_xrefs":["RHEA:14201","EC:5.3.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"D-lyxose ketol-isomerase activity","secondary_identifiers":["MetaCyc:D-LYXOSE-KETOL-ISOMERASE-RXN","KEGG_REACTION:R01898"],"synonyms":[{"name":"D-lyxose aldose-ketose-isomerase activity","type":"related"},{"name":"D-lyxose isomerase activity","type":"related"}],"termid":"GO:0047828"}


id: MONDO:0044621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p12.1p12.3 triplication syndrome is a rare chromosomal anomaly syndrome resulting from the partial duplication of the short arm of chromosome 16 characterized by global developmental delay, pre- or post-natal growth delay and distinctive craniofacial features, including short palpebral fissures, epicanthal folds, bulbous nose, thin upper vermillion border, apparently low-set ears and large ear lobes. Variable clinical features that have been reported include congenital heart disease, genitourinary abnormalities, visual anomalies or, less commonly, infantile hepatic disease. Patients are also reported to have tapered fingers.","definition_xrefs":["Orphanet:485405"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p12.1p12.3 triplication syndrome","secondary_identifiers":["UMLS:C5680097","GARD:21993","MEDGEN:1814451"],"synonyms":[{"name":"tetrasomy 16p12.1-p12.3","type":"exact"},{"name":"tetrasomy 16p12.1p12.3","type":"exact"},{"name":"trip(16)(p12.1p12.3)","type":"exact"}],"termid":"MONDO:0044621","xrefs":{"Monarch":{"xref_id":"0044621"}}}


id: GO:0047066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroperoxy polyunsaturated fatty acid + 2 glutathione = a hydroxy polyunsaturated fatty acid + glutathione disulfide + H2O.","definition_xrefs":["RHEA:19057","PMID:8617728","PMID:3978121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phospholipid-hydroperoxide glutathione peroxidase activity","secondary_identifiers":["Reactome:R-HSA-9018895","EC:1.11.1.12","Reactome:R-HSA-9020271","MetaCyc:1.11.1.12-RXN","Reactome:R-HSA-9018868","Reactome:R-HSA-9020273"],"synonyms":[{"name":"hydroperoxide glutathione peroxidase activity","type":"related"},{"name":"peroxidation-inhibiting protein activity","type":"related"},{"name":"phospholipid hydroperoxide glutathione peroxidase activity","type":"related"}],"termid":"GO:0047066"}


id: GO:0170039
data:
  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ummary":null,"term":"GO:0000162"},{"annotations":[81617,77837,58873,65024,78813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[74853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"},{"annotations":[115462,65303,98278,76800,65968,71922,78012,78448,79240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[113974,73616,72673,76322,80852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[64052,112663,114715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"},{"annotations":[77525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[113975,65477,71421,62028,78784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[80533,78449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic 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amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"proteinogenic amino acid 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id: FYPO:0003699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the intramolecular conversion of uridine to pseudouridine does not occur at a specific site in an rRNA molecule that is normally modified.","definition_xrefs":["GO:0000454","PMID:15716270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"snoRNA guided rRNA pseudouridine synthesis abolished at specific site","termid":"FYPO:0003699"}


id: GO:1900774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline catabolic process (obsolete GO:1900774)","synonyms":[{"name":"fumiquinazoline breakdown","type":"exact"},{"name":"fumiquinazoline catabolism","type":"exact"},{"name":"fumiquinazoline degradation","type":"exact"},{"name":"fumiquinazolines breakdown","type":"related"},{"name":"fumiquinazolines catabolic process","type":"related"},{"name":"fumiquinazolines catabolism","type":"related"},{"name":"fumiquinazolines degradation","type":"related"}],"termid":"GO:1900774"}


id: PBO:0065388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 2","termid":"PBO:0065388"}


id: GO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"regulation of juvenile hormone catabolic process","termid":"GO:0045952"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone catabolic process","termid":"GO:0006719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone catabolic process","synonyms":[{"name":"down regulation of juvenile hormone catabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone catabolic process","type":"exact"},{"name":"downregulation of juvenile hormone catabolic process","type":"exact"},{"name":"inhibition of juvenile hormone catabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone breakdown","type":"exact"},{"name":"negative regulation of juvenile hormone catabolism","type":"exact"},{"name":"negative regulation of juvenile hormone degradation","type":"exact"}],"termid":"GO:0045970"}


id: GO:0006036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cuticle chitin catabolic process (obsolete GO:0006036)","synonyms":[{"name":"cuticle chitin breakdown","type":"exact"},{"name":"cuticle chitin catabolism","type":"exact"},{"name":"cuticle chitin degradation","type":"exact"}],"termid":"GO:0006036"}


id: PBO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 2","termid":"PBO:0052234"}


id: PBO:0057774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2277","termid":"PBO:0057774"}


id: PBO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn5","termid":"PBO:0001871"}


id: PBO:0090439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec67","termid":"PBO:0090439"}


id: MONDO:0060611
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86945,86946],"is_not":false,"summary":null,"term":"MONDO:0060611"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"is_obsolete":false,"name":"combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540434","MEDGEN:1615364","OMIM:617780","Orphanet:658813"],"synonyms":[{"name":"CIMAH","type":"related"},{"name":"combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia","type":"exact"},{"name":"methylenetetrahydrofolate dehydrogenase 1 deficiency","type":"related"}],"termid":"MONDO:0060611","terms_by_termid":{"MONDO:0060611":null},"xrefs":{"Monarch":{"xref_id":"0060611"}}}


id: PBO:0078425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-6","termid":"PBO:0078425"}


id: FYPO:0007953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the chromosome than normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly","termid":"FYPO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}


id: MONDO:0800366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 4","secondary_identifiers":["DOID:0070020","MEDGEN:815132","UMLS:C3808802"],"synonyms":[{"name":"DKCA4","type":"exact"}],"termid":"MONDO:0800366","xrefs":{"Monarch":{"xref_id":"0800366"}}}


id: PBO:0049377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 1","termid":"PBO:0049377"}


id: PBO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase","termid":"PBO:0001460"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: GO:0033887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 4-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["EC:3.1.6.9","RHEA:11444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondro-4-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R03517","MetaCyc:CHONDRO-4-SULFATASE-RXN"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-4-sulfate 4-sulfohydrolase activity","type":"related"}],"termid":"GO:0033887"}


id: PBO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-28","termid":"PBO:0051332"}


id: PBO:0052251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 20","termid":"PBO:0052251"}


id: PBO:0028091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_glucose_starvation","termid":"PBO:0028091"}


id: GO:0102973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 malonyl-CoA + 5 H+ + a hexanoyl-[acyl-carrier-protein] = norsolorinate anthrone + 7 coenzyme A + 7 carbon dioxide + 2 H2O + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.221","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"norsolorinate anthrone synthase activity","secondary_identifiers":["MetaCyc:RXN-9479","RHEA:35179"],"synonyms":[{"name":"norsolorinic acid synthase","type":"exact"}],"termid":"GO:0102973"}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Upon ligand binding, the receptor  forms a complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.","definition_xrefs":["GOC:hjd","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor signaling pathway","synonyms":[{"name":"anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1990262"}


id: GO:0071327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to trehalose","termid":"GO:0010353"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trehalose stimulus","termid":"GO:0071327"}


id: MONDO:0033046
data:
  {"annotated_genes":["SJAG_01354"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87247],"is_not":false,"summary":null,"term":"MONDO:0033046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479655","DOID:0080255","OMIM:617564","MEDGEN:1390366"],"synonyms":[{"name":"MGORS8","type":"related"},{"name":"Meier-Gorlin syndrome 8","type":"exact"}],"termid":"MONDO:0033046","terms_by_termid":{"MONDO:0033046":null},"xrefs":{"Monarch":{"xref_id":"0033046"}}}


id: PBO:0062134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 1 pseudogene","termid":"PBO:0062134"}


id: PBO:0066902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 203","termid":"PBO:0066902"}


id: MONDO:0045016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of cholesterol catabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolism disease","termid":"MONDO:0045008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cholesterol catabolic process disease","secondary_identifiers":["UMLS:C0342825","MEDGEN:575238","SCTID:238032002"],"synonyms":[{"name":"cholesterol catabolism disease","type":"exact"},{"name":"disorder of cholesterol catabolic process","type":"exact"},{"name":"disorder of cholesterol catabolism","type":"exact"}],"termid":"MONDO:0045016","xrefs":{"Monarch":{"xref_id":"0045016"}}}


id: GO:0140750
data:
  {"annotated_genes":["SJAG_02698","SJAG_04755","SJAG_01878","SJAG_05313","SJAG_01938","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72092,74020,74651,75126,81749,115311],"is_not":false,"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A histone octamer slider activity that spaces nucleosomes along chromosomal DNA. This activity is involved in assembling chromatin in uniform nucleosome arrays to regulate transcription by RNA polymerases I, II, and III, as well as DNA replication, recombination and repair.","definition_xrefs":["PMID:16468993","PMID:11683384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone octamer slider activity","termid":"GO:0140751"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03982":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"nucleosome array spacer activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleosome array spacing activity","type":"exact"}],"termid":"GO:0140750","terms_by_termid":{"GO:0140750":null}}


id: MONDO:1010643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, dog","secondary_identifiers":["OMIA:000438-9615"],"termid":"MONDO:1010643","xrefs":{"Monarch":{"xref_id":"1010643"}}}


id: PR:O94642
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11079:SF9","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase subunit tad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.10","secondary_identifiers":["UniProtKB:O94642"],"synonyms":[{"name":"SPBC16D10.10","type":"related"},{"name":"Spom972h-ADAT2","type":"exact"},{"name":"tRNA-specific adenosine-34 deaminase subunit tad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94642"}


id: PR:Q9UUE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.03c","secondary_identifiers":["UniProtKB:Q9UUE6"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KARS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE6"}


id: MONDO:1012779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in dogs due to a mutation in the KRT5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, KRT5-related, dog","secondary_identifiers":["OMIA:002081-9615"],"termid":"MONDO:1012779","xrefs":{"Monarch":{"xref_id":"1012779"}}}


id: FYPO:0001703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is normal (i.e. indistinguishable from wild type). A cell cycle checkpoint controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events.","definition_xrefs":["GO:0000075","GO:0007093","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000631","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle checkpoint","synonyms":[{"name":"normal cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001703"}


id: PBO:0012216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-imports","termid":"PBO:0012216"}


id: PBO:0078709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-4","termid":"PBO:0078709"}


id: GO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from choline","synonyms":[{"name":"N-trimethylglycine biosynthesis from choline","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from choline","type":"exact"},{"name":"choline oxidation","type":"exact"},{"name":"glycine betaine anabolism from choline","type":"exact"},{"name":"glycine betaine formation from choline","type":"exact"},{"name":"glycine betaine synthesis from choline","type":"exact"}],"termid":"GO:0019285"}


id: MONDO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial bent bone dysplasia syndrome","termid":"MONDO:0031615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent bone dysplasia syndrome 1","secondary_identifiers":["GARD:10965","Orphanet:313855","OMIM:614592","MEDGEN:482877","UMLS:C3281247"],"synonyms":[{"name":"BBDS","type":"related"},{"name":"FGFR2-related bent bone dysplasia","type":"exact"},{"name":"bent bone dysplasia (BBD)-FGFR2 type","type":"related"},{"name":"bent bone dysplasia syndrome","type":"related"},{"name":"perinatal lethal bent bone dysplasia","type":"exact"}],"termid":"MONDO:0013815","xrefs":{"Monarch":{"xref_id":"0013815"}}}


id: FYPO:0002379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","termid":"FYPO:0000313"},{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002379"}


id: PBO:0090634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1","termid":"PBO:0090634"}


id: PBO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Fep1","termid":"PBO:0003818"}


id: MONDO:0014609
data:
  {"annotated_genes":["SJAG_02238"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87121],"is_not":false,"summary":null,"term":"MONDO:0014609"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02238":null},"genotype_count":0,"is_obsolete":false,"name":"cognitive impairment - coarse facies - heart defects - obesity - pulmonary involvement - short stature - skeletal dysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616368","UMLS:C4085597","GARD:12845","Orphanet:444077","SCTID:764455002","MEDGEN:894554"],"synonyms":[{"name":"CHOPS","type":"related"},{"name":"CHOPS syndrome","type":"exact"},{"name":"cognitive impairment, coarse facies, heart defects, obesity, pulmonary involvement, short stature, and skeletal dysplasia","type":"related"}],"termid":"MONDO:0014609","terms_by_termid":{"MONDO:0014609":null},"xrefs":{"Monarch":{"xref_id":"0014609"}}}


id: MONDO:0006811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduction of cerebrospinal fluid pressure characterized clinically by headache which is maximal in an upright posture and occasionally by an abducens nerve palsy (see abducens nerve diseases), neck stiffness, hearing loss (see deafness); nausea; and other symptoms. This condition may be spontaneous or secondary to spinal puncture; neurosurgical procedures; dehydration; uremia; trauma (see also craniocerebral trauma); and other processes. Chronic hypotension may be associated with subdural hematomas (see hematoma, subdural) or hygromas. (From Semin Neurol 1996 Mar;16(1):5-10; Adams et al., Principles of Neurology, 6th ed, pp637-8)","definition_xrefs":["MESH:D019585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial hypotension","secondary_identifiers":["UMLS:C0524812","ICD9:349.89","DOID:4723","icd11.foundation:363695674","MEDGEN:141851","EFO:1000993","SCTID:433691000124104","MedDRA:10049977"],"termid":"MONDO:0006811","xrefs":{"Monarch":{"xref_id":"0006811"}}}


id: PBO:0034764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","termid":"PBO:0034764"}


id: PBO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 1","termid":"PBO:0048577"}


id: PBO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0000766"}


id: PATO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000550 red light sensitivity value (obsolete PATO:0000550)","termid":"PATO:0000550"}


id: GO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: PBO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22 (predicted)","termid":"PBO:0017038"}


id: PBO:0039244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1A3 antisense RNA 1","termid":"PBO:0039244"}


id: PBO:0066367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDH10 antisense RNA 1","termid":"PBO:0066367"}


id: PBO:0083827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of U3-containing 90S preribosome; involved in production of 18S rRNA and assembly of small ribosomal subunit; also part of pre-40S ribosome and required for its export into cytoplasm; binds RNA and contains pumilio domain","termid":"PBO:0083827"}


id: MONDO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopyon","termid":"MONDO:0001036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypopyon ulcer","secondary_identifiers":["DOID:10442","ICD9:370.04","MEDGEN:509768","UMLS:C0155070","SCTID:6395007"],"termid":"MONDO:0001035","xrefs":{"Monarch":{"xref_id":"0001035"}}}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: GO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sodium ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular sodium ion homeostasis","synonyms":[{"name":"cellular sodium ion homeostasis","type":"exact"}],"termid":"GO:0006883"}


id: PBO:0111813
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0111813"}


id: PBO:0064892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''alpha","termid":"PBO:0064892"}


id: GO:0010930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"negatively_regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of auxin mediated signaling pathway","synonyms":[{"name":"negative regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010930"}


id: MONDO:1010010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000160"],"termid":"MONDO:1010010","xrefs":{"Monarch":{"xref_id":"1010010"}}}


id: SO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that includes the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric","termid":"SO:0001518"}


id: PR:Q10490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.13c","secondary_identifiers":["UniProtKB:Q10490"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10490"}


id: PBO:0002914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse6","termid":"PBO:0002914"}


id: PBO:0012266
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric reductase in pombe","termid":"PBO:0012266"}


id: MONDO:0032573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow failure syndrome 5","secondary_identifiers":["OMIM:618165","UMLS:C4748488","MEDGEN:1648380"],"synonyms":[{"name":"BMFS5","type":"related"},{"name":"BONE MARROW FAILURE SYNDROME 5","type":"related"}],"termid":"MONDO:0032573","xrefs":{"Monarch":{"xref_id":"0032573"}}}


id: GO:0140677
data:
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id: FYPO:0006184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to osmotic stress measured in a cell differs from normal (i.e. is higher or lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"altered level of osmotic stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"abnormal level of osmotic stress responsive gene mRNA during vegetative growth","type":"exact"},{"name":"altered level of cellular response to osmotic stress responsive gene mRNA","type":"exact"},{"name":"altered level of osmotic stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"altered level of osmotic stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"altered level of osmotic stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"altered mRNA level of osmotic stress responsive genes during vegetative growth","type":"exact"},{"name":"altered osmotic stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006184"}


id: FYPO:0007039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible in one or a few foci or dots in the cytoplasm.","definition_xrefs":["PMID:30181366","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"decreased protein localisation to mitochondrion, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"decreased protein localization to mitochondrion, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"}],"termid":"FYPO:0007039"}


id: FYPO:0002960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle, and that contain determinant of selective removal (DSR) sequences, measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah","PMID:23980030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of DSR-containing meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased DSR-containing meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of DSR-containing meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of DSR-containing meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of DSR-containing meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of DSR-containing meiotic nuclear division gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002960"}


id: PR:O94523
data:
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id: PBO:0117234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine transmembrane transporter family","termid":"PBO:0117234"}


id: SO:0001411
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id: MONDO:0010035
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id: GO:0032936
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id: PBO:0079600
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E3 divergent transcript","termid":"PBO:0079600"}


id: PBO:0080087
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 48","termid":"PBO:0080087"}


id: FYPO:0003270
data:
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id: GO:0050425
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id: GO:1905065
data:
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id: GO:1901885
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: MONDO:1012717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal dystrophy that occurs in the Bengal breed of domestic cats characterized as early-onset primary photoreceptor disorder that leads to blindness within the ﬁrst year of age.","definition_xrefs":["PMID:21923821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophy, domestic cat","termid":"MONDO:1012243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset retinal dystrophy, Bengal, domestic cat","secondary_identifiers":["OMIA:001613-9685"],"termid":"MONDO:1012717","xrefs":{"Monarch":{"xref_id":"1012717"}}}


id: GO:0060951
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neural crest cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}


id: PBO:0035998
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035998"}


id: FYPO:0004460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of mitotic cell cycle RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Regulation of mitotic cell cycle RNAs are transcribed from genes whose products are involved in regulation of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of mitotic cell cycle regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased regulation of mitotic cell cycle gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004460"}


id: PBO:0017546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42 (predicted)","termid":"PBO:0017546"}


id: PBO:0053063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linker for activation of T cells family member 2","termid":"PBO:0053063"}


id: MONDO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Graves' disease is an autoimmune disorder that leads to overactivity of the thyroid gland (hyperthyroidism).It is caused by an abnormal immune system response that causes the thyroid gland to produce too much thyroid hormones. Graves disease is the most common cause of hyperthyroidism andoccurs mostoften in women over age 20. However, the disorder may occur at any age and may affect males as well.Treatmentmayinclude radioiodine therapy, antithyroid drugs, and/or thyroid surgery.","definition_xrefs":["GARD:0006549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic diffuse goiter","termid":"MONDO:0001104"},{"relation_name":"is_a","term_name":"autoimmune thyroid disease","termid":"MONDO:0005623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Graves disease","secondary_identifiers":["MESH:D006111","ICD9:242.0","NANDO:2200328","MEDGEN:6677","EFO:0004237","NCIT:C3071","SCTID:353295004","DOID:12361","UMLS:C0018213"],"synonyms":[{"name":"Basedow disease","type":"related"},{"name":"Basedow's disease","type":"related"},{"name":"Graves disease","type":"exact"},{"name":"Graves' disease","type":"related"},{"name":"Graves' hyperthyroidism","type":"related"},{"name":"exophthalmic goiter","type":"exact"},{"name":"exophthalmic goitre","type":"exact"},{"name":"grave's disease","type":"exact"},{"name":"parry disease","type":"related"}],"termid":"MONDO:0005364","xrefs":{"Monarch":{"xref_id":"0005364"}}}


id: PBO:0062951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABIR family member 2","termid":"PBO:0062951"}


id: PBO:0086700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located adjacent to ARS503 and the telomere on the left arm of chromosome V; regulated by inositol/choline","termid":"PBO:0086700"}


id: PBO:0084535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; homolog of Drosophila crooked neck protein; interacts with U1 snRNP proteins","termid":"PBO:0084535"}


id: PBO:0086429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hydrolase acting on ester bonds","termid":"PBO:0086429"}


id: PBO:0002975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WW domain binding protein-2 ortholog","termid":"PBO:0002975"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: FYPO:0002788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles during vegetative growth","synonyms":[{"name":"decreased vacuole size during vegetative growth","type":"exact"},{"name":"reduced vacuole size during vegetative growth","type":"exact"},{"name":"small vacuoles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002788"}


id: GO:0102243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,6E,10E)-geranylgeraniol + ATP = (2E,6E,10E)-geranylgeranyl phosphate + ADP + H+.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP:geranylgeraniol kinase activity (obsolete GO:0102243)","secondary_identifiers":["RHEA:61664"],"synonyms":[{"name":"ATP:geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0102243"}


id: PBO:0077403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 138","termid":"PBO:0077403"}


id: PBO:0064317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 6","termid":"PBO:0064317"}


id: MONDO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Bartter disease that has material basis in simultaneous mutation in both the CLCNKA and CLCNKB genes.","definition_xrefs":["PMID:15044642","DOID:0110146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome type 4","termid":"MONDO:0019524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 4B","secondary_identifiers":["OMIM:613090","MEDGEN:934772","UMLS:C4310805","GARD:15612"],"synonyms":[{"name":"BARTS4B","type":"exact"},{"name":"Bartter disease type 4B","type":"exact"},{"name":"Bartter syndrome, infantile, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, type 4B","type":"exact"},{"name":"Bartter syndrome, type 4B, neonatal, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, type 4b, digenic","type":"exact"},{"name":"neonatal Bartter syndrome type 4B with sensorineural deafness","type":"exact"}],"termid":"MONDO:0000909","xrefs":{"Monarch":{"xref_id":"0000909"}}}


id: FYPO:0004054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to salt stress","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to salt stress","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during salt stress","type":"exact"},{"name":"nuclear exclusion during cellular response to salt stress","type":"related"},{"name":"nuclear protein exclusion during cellular response to salt stress","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004054"}


id: MONDO:0100116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral respiratory infection that is caused by the MERS coronavirus (MERS-CoV), which most often manifests with moderate to severe respiratory symptoms, including productive cough and shortness of breath, which can progress to pneumonia and acute respiratory distress syndrome.","definition_xrefs":["NCIT:C128424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"Orthocoronavirinae infectious disease","termid":"MONDO:0020753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Middle East respiratory syndrome","secondary_identifiers":["icd11.foundation:1840423014","UMLS:C3694279","DOID:0080642","GARD:22321","MEDGEN:811327","Orphanet:576074"],"synonyms":[{"name":"MERS","type":"exact"},{"name":"camel flu","type":"exact"}],"termid":"MONDO:0100116","xrefs":{"Monarch":{"xref_id":"0100116"}}}


id: FYPO:0001012
data:
  {"alleles_by_uniquename":{"SJAG_03164:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03164","name":"ura4delta","uniquename":"SJAG_03164:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121217],"is_not":false,"summary":null,"term":"FYPO:0001012"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize uracil, and therefore requires uracil in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03164":null},"genotype_count":1,"genotypes_by_uniquename":{"ura4delta":{"display_name":"ura4delta","display_uniquename":"ura4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03164:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for uracil","references_by_uniquename":{"PMID:19330769":null},"single_locus_annotated_genes":["SJAG_03164"],"single_locus_genotype_uniquenames":["ura4delta"],"synonyms":[{"name":"growth auxotrophic for uracil during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for uracil during vegetative growth","type":"exact"},{"name":"uracil auxotrophy","type":"exact"}],"termid":"FYPO:0001012","terms_by_termid":{"FYPO:0001012":null}}


id: PBO:0091982
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective Meiosis and Sporulation","termid":"PBO:0091982"}


id: PBO:0057035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-1","termid":"PBO:0057035"}


id: GO:0004525
data:
  {"annotated_genes":["SJAG_04019","SJAG_03689","SJAG_02156","SJAG_04527","SJAG_01463"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60023,60935,69236,75317,78471],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:11157775","PMID:15242644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-203862","EC:3.1.26.3","Reactome:R-HSA-426464","Reactome:R-HSA-203893","MetaCyc:3.1.26.3-RXN","Reactome:R-HSA-9708292","Reactome:R-HSA-9820840","Reactome:R-HSA-9708408"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: PBO:0089420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA binding protein, human KNOP1 ortholog, implicated in mRNA processing","termid":"PBO:0089420"}


id: PBO:0087193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA splicing factor; required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain","termid":"PBO:0087193"}


id: PBO:0042010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 66","termid":"PBO:0042010"}


id: GO:0004674
data:
  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-HSA-9815501","Reactome:R-HSA-112342","Reactome:R-HSA-170076","Reactome:R-HSA-8877691","Reactome:R-HSA-9645535","Reactome:R-HSA-9825704","Reactome:R-HSA-9633742","Reactome:R-HSA-9839363","Reactome:R-HSA-9619515","Reactome:R-HSA-4411402","Reactome:R-HSA-5693575","Reactome:R-HSA-2399988","Reactome:R-HSA-937022","Reactome:R-HSA-5684887","Reactome:R-HSA-5693609","Reactome:R-HSA-200143","Reactome:R-HSA-9627089","Reactome:R-HSA-9705323","Reactome:R-HSA-451152","Reactome:R-HSA-6804276","Reactome:R-HSA-2399992","Reactome:R-HSA-5672010","Reactome:R-HSA-198371","Reactome:R-HSA-399939","Reactome:R-HSA-5693536","Reactome:R-HSA-170087","Reactome:R-HSA-450222","Reactome:R-HSA-198613","Reactome:R-HSA-5624473","Reactome:R-HSA-9824994","Reactome:R-HSA-3772435","Reactome:R-HSA-442739","Reactome:R-HSA-5672008","Reactome:R-HSA-9022314","Reactome:R-HSA-8878050","Reactome:R-HSA-9861642","Reactome:R-HSA-975160","GO:0004700","Reactome:R-HSA-166245","Reactome:R-HSA-6802933","Reactome:R-HSA-198270","Reactome:R-HSA-8856813","Reactome:R-HSA-2574840","Reactome:R-HSA-5683425","Reactome:R-HSA-199298","Reactome:R-HSA-5610722","Reactome:R-HSA-975180","Reactome:R-HSA-5228811","Reactome:R-HSA-6810233","Reactome:R-HSA-5679205","Reactome:R-HSA-187688","Reactome:R-HSA-5668984","Reactome:R-HSA-198731","Reactome:R-HSA-9632868","Reactome:R-HSA-5665868","Reactome:R-HSA-399952","Reactome:R-HSA-5672978","Reactome:R-HSA-3239014","Reactome:R-HSA-3228469","Reactome:R-HSA-419197","Reactome:R-HSA-4332388","Reactome:R-HSA-5218906","Reactome:R-HSA-5686578","Reactome:R-HSA-2060328","Reactome:R-HSA-5687101","Reactome:R-HSA-69604","Reactome:R-HSA-5692775","Reactome:R-HSA-9612980","Reactome:R-HSA-4088134","Reactome:R-HSA-2399996","Reactome:R-HSA-6804266","Reactome:R-HSA-5578777","Reactome:R-HSA-936951","Reactome:R-HSA-9734547","Reactome:R-HSA-201677","Reactome:R-HSA-448955","Reactome:R-HSA-5682598","Reactome:R-HSA-5693598","Reactome:R-HSA-5610730","Reactome:R-HSA-1358791","Reactome:R-HSA-9729318","Reactome:R-HSA-9626880","Reactome:R-HSA-3132737","Reactome:R-HSA-165758","Reactome:R-HSA-5687090","Reactome:R-HSA-195275","Reactome:R-HSA-374696","Reactome:R-HSA-8863014","Reactome:R-HSA-1592233","Reactome:R-HSA-2562526","Reactome:R-HSA-202222","Reactome:R-HSA-9610153","Reactome:R-HSA-450474","Reactome:R-HSA-9834945","Reactome:R-HSA-2028598","Reactome:R-HSA-168140","Reactome:R-HSA-199299","Reactome:R-HSA-933525","Reactome:R-HSA-9796081","Reactome:R-HSA-6801666","Reactome:R-HSA-6805640","Reactome:R-HSA-2396007","Reactome:R-HSA-5687086","Reactome:R-HSA-1445144","Reactome:R-HSA-5684096","Reactome:R-HSA-188350","Reactome:R-HSA-2028673","Reactome:R-HSA-199917","Reactome:R-HSA-5693551","Reactome:R-HSA-9619843","Reactome:R-HSA-5607732","Reactome:R-HSA-1168641","Reactome:R-HSA-9008822","Reactome:R-HSA-399944","Reactome:R-HSA-9673346","Reactome:R-HSA-166286","Reactome:R-HSA-166119","Reactome:R-HSA-6800490","Reactome:R-HSA-198599","Reactome:R-HSA-2214351","Reactome:R-HSA-156678","Reactome:R-HSA-1454699","Reactome:R-HSA-9648883","Reactome:R-HSA-9729260","Reactome:R-HSA-2168079","Reactome:R-HSA-167098","Reactome:R-HSA-5685242","Reactome:R-HSA-163010","Reactome:R-HSA-2399982","Reactome:R-HSA-9860292","Reactome:R-HSA-3858480","Reactome:R-HSA-5672828","Reactome:R-HSA-5674496","Reactome:R-HSA-380272","Reactome:R-HSA-1458463","Reactome:R-HSA-2028670","Reactome:R-HSA-8863011","Reactome:R-HSA-9612501","Reactome:R-HSA-2430535","Reactome:R-HSA-5635841","Reactome:R-HSA-8863007","Reactome:R-HSA-6805103","Reactome:R-HSA-5218854","Reactome:R-HSA-211164","Reactome:R-HSA-6801675","Reactome:R-HSA-2176475","Reactome:R-HSA-2399981","Reactome:R-HSA-6802926","Reactome:R-HSA-201691","Reactome:R-HSA-3857328","Reactome:R-HSA-165777","Reactome:R-HSA-2028284","Reactome:R-HSA-2294580","Reactome:R-HSA-9796067","Reactome:R-HSA-165162","Reactome:R-HSA-8854908","Reactome:R-HSA-8948146","Reactome:R-HSA-201717","Reactome:R-HSA-165766","Reactome:R-HSA-5692768","Reactome:R-HSA-5675198","Reactome:R-HSA-199839","Reactome:R-HSA-9653503","Reactome:R-HSA-5682983","Reactome:R-HSA-9773803","Reactome:R-HSA-5357472","Reactome:R-HSA-9013978","Reactome:R-HSA-9662823","Reactome:R-HSA-170977","Reactome:R-HSA-4411383","Reactome:R-HSA-349426","Reactome:R-HSA-4332363","Reactome:R-HSA-199863","Reactome:R-HSA-5672948","Reactome:R-HSA-5082387","Reactome:R-HSA-5685156","Reactome:R-HSA-6802943","Reactome:R-HSA-109860","Reactome:R-HSA-163418","Reactome:R-HSA-6805285","Reactome:R-HSA-446701","Reactome:R-HSA-2399985","Reactome:R-HSA-3371435","Reactome:R-HSA-69608","Reactome:R-HSA-5218821","Reactome:R-HSA-8939963","Reactome:R-HSA-9009208","Reactome:R-HSA-3928625","Reactome:R-HSA-8932322","Reactome:R-HSA-9758486","Reactome:R-HSA-9656215","Reactome:R-HSA-9832782","Reactome:R-HSA-450499","Reactome:R-HSA-419087","Reactome:R-HSA-9648089","Reactome:R-HSA-2470508","MetaCyc:PROTEIN-KINASE-RXN","Reactome:R-HSA-5218916","Reactome:R-HSA-1181355","Reactome:R-HSA-1168635","Reactome:R-HSA-3000310","Reactome:R-HSA-5607742","Reactome:R-HSA-5683792","Rea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serine kinase activity","type":"narrow"},{"name":"protein serine-threonine kinase activity","type":"related"},{"name":"protein threonine kinase activity","type":"narrow"},{"name":"protein-serine kinase activity","type":"narrow"},{"name":"serine kinase activity","type":"narrow"},{"name":"serine protein kinase activity","type":"narrow"},{"name":"serine(threonine) protein kinase activity","type":"related"},{"name":"serine-specific protein kinase activity","type":"narrow"},{"name":"serine/threonine protein kinase activity","type":"related"},{"name":"threonine-specific protein kinase activity","type":"narrow"}],"termid":"GO:0004674","terms_by_termid":{"GO:0004674":null,"GO:0004676":null,"GO:0004683":null,"GO:0004691":null,"GO:0004693":null,"GO:0004694":null,"GO:0004697":null,"GO:0004699":null,"GO:0004707":null,"GO:0004709":null,"GO:0004711":null,"GO:0004740":null,"GO:0008349":null,"GO:0008353":null,"GO:0035175":null,"GO:0072354":null,"GO:0072371":null,"GO:0140834":null,"GO:0140836":null}}


id: GO:0001401
data:
  {"annotated_genes":["SJAG_02355","SJAG_01951","SJAG_01780","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62573,71697,75143,92250],"is_not":false,"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"A large complex of the mitochondrial outer membrane that mediates sorting of some imported proteins to the outer membrane and their assembly in the membrane; functions after import of incoming proteins by the mitochondrial outer membrane translocase complex.","definition_xrefs":["PMID:12891361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01780":null,"SJAG_01951":null,"SJAG_02355":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"SAM complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TOB complex","type":"exact"},{"name":"mitochondrial sorting and assembly machinery complex","type":"exact"}],"termid":"GO:0001401","terms_by_termid":{"GO:0001401":null}}


id: GO:1903394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to kinetochore that is involved in kinetochore assembly.","definition_xrefs":["GOC:TermGenie","PMID:15369671","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"},{"relation_name":"part_of","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein localization to kinetochore involved in kinetochore assembly","synonyms":[{"name":"condensin localization to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"condensin localization to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"condensin localization to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"condensin localization to kinetochore involved in kinetochore assembly","type":"narrow"},{"name":"condensin localization to kinetochore involved in kinetochore formation","type":"related"},{"name":"protein localisation to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"protein localisation to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"protein localisation to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"protein localisation to kinetochore involved in kinetochore assembly","type":"exact"},{"name":"protein localisation to kinetochore involved in kinetochore formation","type":"related"},{"name":"protein localization to kinetochore involved in centromere and kinetochore complex maturation","type":"narrow"},{"name":"protein localization to kinetochore involved in centromere/kinetochore complex maturation","type":"narrow"},{"name":"protein localization to kinetochore involved in chromosome-kinetochore attachment","type":"narrow"},{"name":"protein localization to kinetochore involved in kinetochore formation","type":"related"}],"termid":"GO:1903394"}


id: PBO:0027467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_endocytosis_during_meiotic_cell_cycle","termid":"PBO:0027467"}


id: PBO:0077295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 38A","termid":"PBO:0077295"}


id: PBO:0082145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA-binding protein; transports newly synthesized acyl-CoA esters from fatty acid synthetase (Fas1p-Fas2p) to acyl-CoA-consuming processes; subject to starvation-induced, Grh1p-mediated unconventional secretion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082145"}


id: PBO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Spk1","termid":"PBO:0001833"}


id: FYPO:0001788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cytoplasm","synonyms":[{"name":"normal protein localisation to cytoplasm","type":"exact"},{"name":"normal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0001788"}


id: GO:1903352
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of L-ornithine across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903352","terms_by_termid":{"GO:1990575":null}}


id: PBO:0113360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs; required for the thiolation of uridine at the wobble position of Gln, Lys, and Glu tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae; localizes to cytosol and peroxisomes","termid":"PBO:0113360"}


id: PBO:0043478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 1","termid":"PBO:0043478"}


id: PBO:0057590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892c","termid":"PBO:0057590"}


id: FYPO:0008349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-nucleotidase activity is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}


id: PBO:0058669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6797","termid":"PBO:0058669"}


id: MONDO:0025003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the domestic or wild goat of the genus Capra.","definition_xrefs":["MESH:D015511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goat disease","synonyms":[{"name":"caprine disease","type":"related"},{"name":"caprine diseases","type":"related"},{"name":"disease, caprine","type":"related"},{"name":"disease, goat","type":"related"},{"name":"diseases, caprine","type":"related"},{"name":"diseases, goat","type":"related"},{"name":"goat disease","type":"exact"}],"termid":"MONDO:0025003","xrefs":{"Monarch":{"xref_id":"0025003"}}}


id: MONDO:0017131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary cardiac anomaly (obsolete MONDO:0017131)","secondary_identifiers":["Orphanet:271853"],"synonyms":[{"name":"genetic cardiac anomaly","type":"exact"}],"termid":"MONDO:0017131","xrefs":{"Monarch":{"xref_id":"0017131"}}}


id: MOD:01025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-bromo-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated tyrosine","termid":"MOD:01000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-bromo-L-tyrosine","synonyms":[{"name":"3'-BrTyr","type":"exact"}],"termid":"MOD:01025"}


id: GO:1902243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of copal-8-ol diphosphate(3-).","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) biosynthetic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) anabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) biosynthesis","type":"exact"},{"name":"copal-8-ol diphosphate(3-) formation","type":"exact"},{"name":"copal-8-ol diphosphate(3-) synthesis","type":"exact"}],"termid":"GO:1902243"}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: PBO:0085385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane G protein coupled receptor (GPCR); interacts with the heterotrimeric G protein alpha subunit, Gpa2p, and with Plc1p; sensor that integrates nutritional signals with the modulation of cell fate via PKA and cAMP synthesis","termid":"PBO:0085385"}


id: MONDO:0007189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete B-cell growth factor (obsolete MONDO:0007189)","secondary_identifiers":["OMIM:109540"],"synonyms":[{"name":"B-cell growth Factor 1","type":"related"},{"name":"B-cell growth factor","type":"exact"},{"name":"BCGF","type":"related"}],"termid":"MONDO:0007189","xrefs":{"Monarch":{"xref_id":"0007189"}}}


id: FYPO:0002511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein palmitoylation during meiosis","synonyms":[{"name":"abolished protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"protein palmitoylation abolished during meiosis","type":"exact"},{"name":"protein palmitoylation absent during meiosis","type":"exact"}],"termid":"FYPO:0002511"}


id: PBO:0059567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1J, pseudogene","termid":"PBO:0059567"}


id: PBO:0088744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0088744"}


id: GO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dATP biosynthetic process","synonyms":[{"name":"dATP anabolism","type":"exact"},{"name":"dATP biosynthesis","type":"exact"},{"name":"dATP formation","type":"exact"},{"name":"dATP synthesis","type":"exact"}],"termid":"GO:0006175"}


id: MONDO:0007524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The autosomal dominant form of the vascular type of Ehlers-Danlos syndrome. vEDS is almost always inherited in an autosomal dominant manner but rare examples of biallelic inheritance have been reported.","definition_xrefs":["MONDO:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, vascular type","termid":"MONDO:0017314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Ehlers-Danlos syndrome, vascular type","secondary_identifiers":["MEDGEN:541286","UMLS:C0268339","DOID:14756","OMIM:130050"],"synonyms":[{"name":"EDS 4","type":"broad"},{"name":"EDSVASC","type":"related"},{"name":"Ehlers-Danlos syndrome, Ecchymotic type","type":"related"},{"name":"Ehlers-Danlos syndrome, arterial type","type":"related"},{"name":"Ehlers-Danlos syndrome, sack-Barabas type","type":"related"},{"name":"Ehlers-Danlos syndrome, type IV, autosomal dominant","type":"exact"},{"name":"Ehlers-Danlos syndrome, vascular type","type":"broad"},{"name":"Ehlers-Danlos syndrome, vascular type, autosomal dominant","type":"exact"},{"name":"autosomal dominant Ehlers-Danlos syndrome, vascular type","type":"exact"},{"name":"autosomal dominant type IV Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0007524","xrefs":{"Monarch":{"xref_id":"0007524"}}}


id: FYPO:0001360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased amino acid import during vegetative growth","synonyms":[{"name":"decreased amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased amino acid import during mitotic cell cycle","type":"related"},{"name":"decreased amino acid import into cell during vegetative growth","type":"exact"},{"name":"decreased amino acid uptake during vegetative growth","type":"exact"},{"name":"reduced amino acid import during vegetative growth","type":"exact"}],"termid":"FYPO:0001360"}


id: PBO:0058948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67","termid":"PBO:0058948"}


id: GO:1904872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["GOC:nc","PMID:25467444","GOC:TermGenie","GOC:BHF_telomere","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"}


id: PBO:0091529
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RHO1","termid":"PBO:0091529"}


id: GO:0033147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of intracellular estrogen receptor signaling pathway","termid":"GO:0033146"},{"relation_name":"negatively_regulates","term_name":"estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"negative regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"negative regulation of estrogen receptor signalling pathway","type":"exact"}],"termid":"GO:0033147"}


id: PBO:0075261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 14","termid":"PBO:0075261"}


id: FYPO:0004552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation exposure during mitotic G2 phase is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic G2 phase","synonyms":[{"name":"normal cell cycle delay following ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"normal cell cycle regulation during cellular response to ionizing radiation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ionizing radiation during G2 phase","type":"exact"}],"termid":"FYPO:0004552"}


id: PBO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2","termid":"PBO:0046179"}


id: PBO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 179 pseudogene","termid":"PBO:0070239"}


id: MONDO:0004763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spontaneous or traumatic separation of the layers of the carotid artery wall. It manifests with headache, neck pain, temporary vision loss, and/or ischemic stroke.","definition_xrefs":["NCIT:C125662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid artery dissection","secondary_identifiers":["ICD9:443.21","ICD10CM:I77.71","DOID:9348","UMLS:C0338585","SCTID:720626009","MEDGEN:488844"],"synonyms":[{"name":"dissection of carotid artery","type":"exact"}],"termid":"MONDO:0004763","xrefs":{"Monarch":{"xref_id":"0004763"}}}


id: PBO:0087245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich protein of unknown function; predicted to be palmitoylated; overproduction suppresses growth inhibition caused by exposure to immunosuppressant leflunomide; MLF3 has a paralog, VHS2, that arose from the whole genome duplication","termid":"PBO:0087245"}


id: GO:0006563
data:
  {"annotated_genes":["SJAG_01880","SJAG_00582","SJAG_01766","SJAG_04305","SJAG_02791","SJAG_04449","SJAG_02313","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77927,67692,60971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[75098,73838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[118935,81377,61498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02791":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-serine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-serine metabolism","type":"exact"}],"termid":"GO:0006563","terms_by_termid":{"GO:0006535":null,"GO:0006564":null,"GO:0019264":null}}


id: PBO:0017894
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dis1 Suppressing protein Kinase","termid":"PBO:0017894"}


id: FYPO:0007514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to manumycin A. Cells stop growing (and may die) at a concentration of manumycin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to manumycin A","synonyms":[{"name":"hypersensitive to manumycin A","type":"exact"},{"name":"sensitive to manu-A","type":"exact"},{"name":"sensitive to manumycin A during mitotic cell cycle","type":"related"},{"name":"sensitive to manumycin A during vegetative growth","type":"exact"}],"termid":"FYPO:0007514"}


id: PBO:0057566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 761","termid":"PBO:0057566"}


id: FYPO:0003907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to okadaic acid. Cells stop growing (and may die) at a concentration of okadaic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to okadaic acid","synonyms":[{"name":"hypersensitive to okadaic acid","type":"exact"},{"name":"sensitive to okadaic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to okadaic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003907"}


id: GO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.","definition_xrefs":["ISBN:0201090910","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (NAD+) activity (obsolete GO:0034604)","termid":"GO:0034604"}


id: PBO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0319 like","termid":"PBO:0052308"}


id: GO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of FAT10 to a substrate protein via the reaction X-FAT10 + S = X + S-FAT10, where X is either an E2 or E3 enzyme, the X-FAT10 linkage is a thioester bond, and the S-FAT10 linkage is an isopeptide bond between the C-terminal glycine of FAT10 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAT10 transferase activity","termid":"GO:0019775"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0019787","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"FAT10 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061661"}


id: PATO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001174 urine composition (obsolete PATO:0001174)","termid":"PATO:0001174"}


id: PBO:0086634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; proposed to be involved in resistance to streptozotocin and camptothecin","termid":"PBO:0086634"}


id: PATO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration of temperature which is greater relative to the normal or average in respect to the quality of temperature of enduring or continuing in time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased duration","termid":"PATO:0000498"},{"relation_name":"is_a","term_name":"duration of temperature","termid":"PATO:0001310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration of temperature","synonyms":[{"name":"high duration of temperature","type":"exact"}],"termid":"PATO:0001312"}


id: GO:1905407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of creatine transmembrane transporter activity.","definition_xrefs":["GOC:PARL","PMID:25531585","GO_REF:0000059","GOC:bc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of creatine transmembrane transporter activity (obsolete GO:1905407)","termid":"GO:1905407"}


id: PBO:0043685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 1","termid":"PBO:0043685"}


id: PBO:0049510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 17","termid":"PBO:0049510"}


id: GO:0009465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble cytochrome b562 (obsolete GO:0009465)","synonyms":[{"name":"soluble cytochrome b562","type":"exact"}],"termid":"GO:0009465"}


id: PBO:0064680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 16","termid":"PBO:0064680"}


id: SO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_cyano_7_deazaguanosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_cyano_seven_deazaguanosine","secondary_identifiers":["RNAMOD:047"],"synonyms":[{"name":"7-cyano-7-deazaguanosine","type":"exact"},{"name":"preQ0","type":"exact"},{"name":"seven cyano seven deazaguanosine","type":"exact"}],"termid":"SO:0001321"}


id: PBO:0047059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A","termid":"PBO:0047059"}


id: PBO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-26 (pseudogene)","termid":"PBO:0051441"}


id: MONDO:0023203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuchs atrophia gyrata chorioideae et retinae","secondary_identifiers":["UMLS:C2931721","MEDGEN:444126","MESH:C538071"],"termid":"MONDO:0023203","xrefs":{"Monarch":{"xref_id":"0023203"}}}


id: GO:0035148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube formation","synonyms":[{"name":"lumen formation in an anatomical structure","type":"related"},{"name":"tube lumen formation","type":"exact"}],"termid":"GO:0035148"}


id: PBO:0076277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 1","termid":"PBO:0076277"}


id: MONDO:1010908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, American mink","secondary_identifiers":["OMIA:000679-452646"],"termid":"MONDO:1010908","xrefs":{"Monarch":{"xref_id":"1010908"}}}


id: PR:O14109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- maf1 gene.","definition_xrefs":["UniProtKB:O14109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III transcription maf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.12c","synonyms":[{"name":"Spom972h-maf1","type":"exact"}],"termid":"PR:O14109"}


id: GO:0015880
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The directed movement of coenzyme A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"coenzyme A transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015880","terms_by_termid":{"GO:1990559":null}}


id: GO:0045593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cumulus cell differentiation","synonyms":[{"name":"down regulation of cumulus cell differentiation","type":"exact"},{"name":"down-regulation of cumulus cell differentiation","type":"exact"},{"name":"downregulation of cumulus cell differentiation","type":"exact"},{"name":"inhibition of cumulus cell differentiation","type":"narrow"},{"name":"negative regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045593"}


id: MONDO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sclerosis-ichthyosis-factor VIII deficiency syndrome is characterized by the association of multiple sclerosis with lamellar ichthyosis and hematological anomalies (beta thalassemia minor and a quantitative deficit of factor VIII-von Willebrand complex). Other clinical manifestations may include eye involvement (optic atrophy, diplopia), neuromuscular involvement (ataxia, pyramidal syndrome, gait disturbance) and sensory disorder. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:3151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"multiple sclerosis-ichthyosis-factor VIII deficiency syndrome","secondary_identifiers":["UMLS:C4518551","GARD:18787","MEDGEN:1391655"],"termid":"MONDO:0017837","xrefs":{"Monarch":{"xref_id":"0017837"}}}


id: MONDO:0020796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silver-Russell syndrome 1","secondary_identifiers":["MEDGEN:1718472","OMIM:180860","UMLS:C5393125"],"synonyms":[{"name":"SRS1","type":"exact"}],"termid":"MONDO:0020796","xrefs":{"Monarch":{"xref_id":"0020796"}}}


id: PBO:0086293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in maintaining mitochondrial morphology; also involved in maintaining normal cardiolipin levels; mitochondrial inner membrane protein; proposed to be involved in N-acylethanolamine metabolism; related to mammalian N-acylPE-specific phospholipase D","termid":"PBO:0086293"}


id: MONDO:0010824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome with 46,XY disorder of sex development characterized by variable degrees of intellectual disability, short stature, severe genital anomalies resulting in sexual ambiguity (such as pseudovaginal perineoscrotal hypospadias and persistence of Müllerian structures), and ocular anomalies (microphthalmia, coloboma). Craniofacial peculiarities (coarse features, deep set eyes), spina bifida, imperforate anus, and sensorineural hearing loss were also described. No new cases have been reported since 1994.","definition_xrefs":["Orphanet:2983"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of sex development-intellectual disability syndrome","secondary_identifiers":["UMLS:C1838611","GARD:4550","MEDGEN:325469","SCTID:719450007","OMIM:600122","MESH:C535693"],"synonyms":[{"name":"Male pseudohermaphroditism intellectual disability syndrome, Verloes type","type":"related"},{"name":"Verloes Gillerot Fryns syndrome","type":"related"},{"name":"Verloes syndrome","type":"related"},{"name":"Verloes-Gillerot-Fryns syndrome","type":"exact"},{"name":"disorder of sex development intellectual disability","type":"related"},{"name":"male pseudohermaphroditism/intellectual disability syndrome, Verloes type","type":"related"},{"name":"male pseudohermaphroditism/mental retardation syndrome, Verloes type","type":"related"},{"name":"pseudohermaphroditism-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0010824","xrefs":{"Monarch":{"xref_id":"0010824"}}}


id: MONDO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8-derived supernumerary ring/marker is a rare chromosomal anomaly comprising variable parts of chromosome 8. The phenotype of mosaic or non-mosaic supernumerary r(8)/mar(8) ranges from almost normal to variable degrees of minor abnormalities, and growth and mental retardation overlapping with the well-known mosaic trisomy 8 syndrome.","definition_xrefs":["Orphanet:1450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 8 disorder","termid":"MONDO:0700015"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8-derived supernumerary ring/marker","secondary_identifiers":["NCIT:C121988","UMLS:C4274902","SCTID:715983001","GTR:AN0101480","MESH:C537824","GARD:1347","GTR:AN0101479","MEDGEN:895673"],"synonyms":[{"name":"R8","type":"related"},{"name":"Ring 8","type":"exact"},{"name":"Ring chromosome 8 syndrome","type":"related"},{"name":"chromosome 8 ring","type":"related"},{"name":"r(8) syndrome","type":"exact"},{"name":"ring chromosome 8","type":"exact"},{"name":"rose cluster 8","type":"exact"},{"name":"supernumerary ring/marker 8","type":"exact"}],"termid":"MONDO:0015443","xrefs":{"Monarch":{"xref_id":"0015443"}}}


id: MONDO:0859189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital hearing loss, and ovarian insufficiency syndrome","secondary_identifiers":["MEDGEN:1794190","UMLS:C5561980","OMIM:619518"],"termid":"MONDO:0859189","xrefs":{"Monarch":{"xref_id":"0859189"}}}


id: GO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ammonium ions from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transepithelial transport","termid":"GO:0070633"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transepithelial ammonium transport","termid":"GO:0070634"}


id: GO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans.","definition_xrefs":["EC:3.2.1.89","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"arabinogalactan endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.89-RXN"],"synonyms":[{"name":"arabinogalactan 4-beta-D-galactanohydrolase activity","type":"related"},{"name":"arabinogalactanase activity","type":"exact"},{"name":"endo-1,4-beta-galactanase activity","type":"exact"},{"name":"galactanase activity","type":"exact"}],"termid":"GO:0031218"}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: GO:0140536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription corepressor activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Nuclear receptor corepressors often act by altering chromatin structure and modifications. For example, one class of transcription nuclear receptor corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:7566114","PMID:7566126","PMID:9238851"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor corepressor activity (obsolete GO:0140536)","synonyms":[{"name":"nuclear corepressor activity","type":"broad"}],"termid":"GO:0140536"}


id: PBO:0075144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C","termid":"PBO:0075144"}


id: PBO:0071811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 6","termid":"PBO:0071811"}


id: PATO:0001600
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the rear of organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteriorly rotated","termid":"PATO:0001600"}


id: PBO:0062364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily X member 1","termid":"PBO:0062364"}


id: MONDO:0020068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious encephalitis","secondary_identifiers":["Orphanet:98253","DOID:10993","MEDGEN:581376","SCTID:192727001","UMLS:C0393459","ICD9:323.6","MedDRA:10057235"],"termid":"MONDO:0020068","xrefs":{"Monarch":{"xref_id":"0020068"}}}


id: GO:0102148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + an N-acetyl-beta-D-galactosalaminyl-[glycan] = N-acetyl-beta-D-galactosamine + a glycan.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acetyl-beta-D-galactosaminidase activity (obsolete GO:0102148)","termid":"GO:0102148"}


id: GO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic enzymatic conversion of D-xylose to ethanol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-xylose fermentation (obsolete GO:0044836)","termid":"GO:0044836"}


id: FYPO:0007928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethylenediaminetetraacetic acid (EDTA). Cells stop growing (and may die) at a concentration of ethylenediaminetetraacetic acid (EDTA) that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to ethylenediaminetetraacetic acid","synonyms":[{"name":"sensitive to EDTA","type":"exact"}],"termid":"FYPO:0007928"}


id: PBO:0027045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_2-oxoglutarate_dioxygenase_activity","termid":"PBO:0027045"}


id: GO:1990775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a endothelin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Endothelins are endothelium-derived vasoactive peptides involved in a variety of biological functions.","definition_xrefs":["PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"endothelin production","synonyms":[{"name":"EDN1 production","type":"narrow"},{"name":"EDN2 production","type":"narrow"},{"name":"EDN3 production","type":"narrow"},{"name":"endothelin secretion","type":"narrow"},{"name":"endothelin-1 secretion","type":"narrow"},{"name":"endothelin-2 production","type":"narrow"},{"name":"endothelin-3 production","type":"narrow"}],"termid":"GO:1990775"}


id: PBO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 26","termid":"PBO:0061366"}


id: MONDO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A infectious disease involving the Bacteria.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial infectious disease (obsolete MONDO:0001026)","synonyms":[{"name":"Bacteria infection","type":"exact"},{"name":"infections, Bacteria","type":"related"}],"termid":"MONDO:0001026","xrefs":{"Monarch":{"xref_id":"0001026"}}}


id: MONDO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mechanical entropion","secondary_identifiers":["MEDGEN:509838","DOID:13112","ICD9:374.02","SCTID:38683003","UMLS:C0155189"],"termid":"MONDO:0001636","xrefs":{"Monarch":{"xref_id":"0001636"}}}


id: MONDO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete West Nile encephalitis (obsolete MONDO:0006016)","termid":"MONDO:0006016","xrefs":{"Monarch":{"xref_id":"0006016"}}}


id: GO:0033132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hexokinase activity","termid":"GO:1903300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucokinase activity","synonyms":[{"name":"down regulation of glucokinase activity","type":"exact"},{"name":"down-regulation of glucokinase activity","type":"exact"},{"name":"downregulation of glucokinase activity","type":"exact"},{"name":"glucokinase inhibitor","type":"narrow"},{"name":"inhibition of glucokinase activity","type":"narrow"}],"termid":"GO:0033132"}


id: MONDO:0100201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vertebral column disorder caused by degeneration of intervertebral disks of the lumbar spine. One of the most common musculoskeletal disorders, it has strong genetic determinants.","definition_xrefs":["OMIM:603932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar disk disease","secondary_identifiers":["MEDGEN:67462","UMLS:C0221775"],"termid":"MONDO:0100201","xrefs":{"Monarch":{"xref_id":"0100201"}}}


id: PBO:0045703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 2","termid":"PBO:0045703"}


id: GO:0016347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-independent cell adhesion molecule activity (obsolete GO:0016347)","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"exact"}],"termid":"GO:0016347"}


id: FYPO:0001001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition, instead of the normal G1 phase, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","termid":"FYPO:0000710"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen depletion","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen deprivation","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during nitrogen starvation","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during nitrogen starvation","type":"related"},{"name":"advanced nitrogen deprivation-induced G1 arrest","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"mitotic G2/M phase transition arrest during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001001"}


id: GO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that passes through a lipid bilayer membrane.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transmembrane collagen trimer","synonyms":[{"name":"MACIT","type":"exact"}],"termid":"GO:0030936"}


id: MONDO:0009794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 4 is characterized by lingual hamartoma, postaxial polysyndactyly of hands and feet, and mesomelic shortening of the legs with supinate equinovarus feet.","definition_xrefs":["Orphanet:2753"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome IV","secondary_identifiers":["GARD:816","MESH:C537133","OMIM:258860","DOID:0060374","SCTID:239031000","UMLS:C0406727","MEDGEN:98358"],"synonyms":[{"name":"Baraitser-Burn syndrome","type":"exact"},{"name":"Mohr-Majewski syndrome","type":"exact"},{"name":"OFD syndrome 4","type":"related"},{"name":"OFD4","type":"exact"},{"name":"Ofd syndrome with tibial defects","type":"related"},{"name":"Ofd syndrome, Baraitser-Burn type","type":"related"},{"name":"Ofds 4","type":"related"},{"name":"oral facial digital syndrome 4","type":"related"},{"name":"oral facial digital syndrome type 4","type":"related"},{"name":"oral-Facial-digital syndrome, type 4","type":"related"},{"name":"oral-facial-digital syndrome type 4","type":"exact"},{"name":"orofaciodigital syndrome 4","type":"related"},{"name":"orofaciodigital syndrome IV","type":"exact"},{"name":"orofaciodigital syndrome type 4","type":"exact"},{"name":"orofaciodigital syndrome type IV","type":"exact"},{"name":"orofaciodigital syndrome with tibial dysplasia","type":"related"}],"termid":"MONDO:0009794","xrefs":{"Monarch":{"xref_id":"0009794"}}}


id: PBO:0088016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein with a J domain; required to preserve the folding capacity of the endoplasmic reticulum; loss of the non-essential ERJ5 gene leads to a constitutively induced unfolded protein response","termid":"PBO:0088016"}


id: GO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to absence of light","termid":"GO:0009646"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to absence of light","synonyms":[{"name":"cellular response to darkness","type":"related"}],"termid":"GO:0071485"}


id: PBO:0070138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 52 pseudogene","termid":"PBO:0070138"}


id: PR:O94399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- twf1 gene.","definition_xrefs":["UniProtKB:O94399","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.06","synonyms":[{"name":"Spom972h-twf1","type":"exact"}],"termid":"PR:O94399"}


id: PBO:0067548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 697, pseudogene","termid":"PBO:0067548"}


id: SO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of a codon causing the substitution of a non conservative amino acid for another in the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid_substitution","termid":"SO:0001606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_conservative_amino_acid_substitution","synonyms":[{"name":"non conservative amino acid substitution","type":"exact"}],"termid":"SO:0001608"}


id: MONDO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant epithelial neoplasm that is usually cystic and arises from the exocrine pancreas. It is characterized by the presence of neoplastic epithelial cells that produce fluid similar to serum. Representative examples include serous cystadenoma and serous cystadenocarcinoma.","definition_xrefs":["NCIT:C41248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic exocrine neoplasm","termid":"MONDO:0021076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic serous cystic neoplasm","secondary_identifiers":["UMLS:C1518875","DOID:3919","MEDGEN:274122"],"synonyms":[{"name":"pancreatic serous cystic neoplasm","type":"exact"},{"name":"pancreatic serous neoplasm","type":"exact"}],"termid":"MONDO:0002810","xrefs":{"Monarch":{"xref_id":"0002810"}}}


id: PR:O14154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase mde5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.09","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mde5","type":"exact"},{"name":"mei4-dependent protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14154"}


id: PBO:0068753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 8, pseudogene","termid":"PBO:0068753"}


id: PBO:0116275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic gamma-glutamyl phosphate reductase; catalyzes the second step in proline biosynthesis","termid":"PBO:0116275"}


id: PBO:0080247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 10 pseudogene","termid":"PBO:0080247"}


id: GO:0022840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narrow pore channel activity","termid":"GO:0022842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"leak channel activity","termid":"GO:0022840"}


id: MONDO:0016240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemimelia is a limb malformation characterized by the absence or gross shortening of the lower portion of one or more of the limbs. The condition is designated according to which bone of the distal arm or leg is absent or defective and includes fibular, radial, tibial, or ulnar hemimelia. Hemimelia ranges in severity.","definition_xrefs":["Orphanet:2130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hemimelia","secondary_identifiers":["NCIT:C34674","SCTID:33076008","GARD:18761","MedDRA:10019464","MEDGEN:9194","UMLS:C0018987"],"synonyms":[{"name":"longitudinal meromelia","type":"exact"}],"termid":"MONDO:0016240","xrefs":{"Monarch":{"xref_id":"0016240"}}}


id: GO:0170036
data:
  {"annotated_genes":["SJAG_03650","SJAG_03577","SJAG_01924","SJAG_00543","SJAG_04984","SJAG_00626","SJAG_04588","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78523,81282],"is_not":false,"summary":null,"term":"GO:0170036"},{"annotations":[100148,71827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[102179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170046"},{"annotations":[109882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[63729,78704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"},{"annotations":[92498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the cytosol into the mitochondrion.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null,"SJAG_01924":null,"SJAG_03577":null,"SJAG_03650":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"import into the mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0170036","terms_by_termid":{"GO:0006850":null,"GO:0140300":null,"GO:0160256":null,"GO:0170036":null,"GO:0170046":null,"GO:1904983":null}}


id: PBO:0056435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 8","termid":"PBO:0056435"}


id: GO:0120322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target lipid.","definition_xrefs":["PMID:34012115","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid modification by small protein conjugation","termid":"GO:0120322"}


id: PBO:0091078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase","termid":"PBO:0091078"}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: GO:0009174
data:
  {"annotated_genes":["SJAG_04709","SJAG_04354","SJAG_00533","SJAG_04713","SJAG_03164","SJAG_00197","SJAG_00964","SJAG_00694","SJAG_00444","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62652,59783,57241,61647,59408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[69601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[90322,89324,93865,94864,69602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009174","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: PBO:0084677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aspartyl-tRNA synthetase; required for acylation of aspartyl-tRNA; yeast and bacterial aspartyl-, asparaginyl-, and lysyl-tRNA synthetases contain regions with high sequence similarity, suggesting a common ancestral gene","termid":"PBO:0084677"}


id: GO:0019022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of ribonucleic acid. This results in genome replication and expression of genetic information being inextricably linked.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA viral genome (obsolete GO:0019022)","termid":"GO:0019022"}


id: GO:0030187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melatonin (N-acetyl-5-methoxytryptamine).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin metabolic process","termid":"GO:0030186"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melatonin biosynthetic process","synonyms":[{"name":"melatonin anabolism","type":"exact"},{"name":"melatonin biosynthesis","type":"exact"},{"name":"melatonin formation","type":"exact"},{"name":"melatonin synthesis","type":"exact"}],"termid":"GO:0030187"}


id: PBO:0046856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 6","termid":"PBO:0046856"}


id: PBO:0043250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 9","termid":"PBO:0043250"}


id: PBO:0064989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC1 antisense RNA 1","termid":"PBO:0064989"}


id: PBO:0075926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 18","termid":"PBO:0075926"}


id: MONDO:0020319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloblastic leukemia without maturation (obsolete MONDO:0020319)","termid":"MONDO:0020319","xrefs":{"Monarch":{"xref_id":"0020319"}}}


id: PR:O13724
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein ZPR1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01538","PRO:DNx","PANTHER:PTHR10876:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zpr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.04c","secondary_identifiers":["UniProtKB:O13724"],"synonyms":[{"name":"Spom972h-ZNF259","type":"exact"}],"termid":"PR:O13724"}


id: PBO:0016560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase Nus1","termid":"PBO:0016560"}


id: PATO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000518 chemical sensitivity value (obsolete PATO:0000518)","termid":"PATO:0000518"}


id: GO:1900533
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"palmitic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900533","terms_by_termid":{"GO:1900535":null}}


id: PBO:0064997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM4 antisense RNA 1","termid":"PBO:0064997"}


id: PBO:0070321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 10","termid":"PBO:0070321"}


id: PBO:0064406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 1","termid":"PBO:0064406"}


id: PBO:0079683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3D","termid":"PBO:0079683"}


id: PBO:0085229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of the CCR4-NOT transcriptional regulatory complex; involved in controlling mRNA initiation, elongation, and degradation; contains a PH-like domain; CAF120 has a paralog, SKG3, that arose from the whole genome duplication","termid":"PBO:0085229"}


id: PBO:0036431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary septum and spore wall linear 1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0036431"}


id: FYPO:0006315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation does not occur. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["PMID:29259000","PomBase:mah","GO:0045143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished homologous chromosome segregation","synonyms":[{"name":"abolished chromosome segregation during meiosis I","type":"exact"},{"name":"homologous chromosome segregation abolished","type":"exact"}],"termid":"FYPO:0006315"}


id: PBO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 3","termid":"PBO:0070446"}


id: PBO:0116609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3135","termid":"PBO:0116609"}


id: GO:0098815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory postsynaptic potential (EPSP). EPSP is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: PBO:0028509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028509"}


id: PBO:0080769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactive specific transcript","termid":"PBO:0080769"}


id: PBO:0017966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 gamma subunit","termid":"PBO:0017966"}


id: MONDO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pulmonary systemic sclerosis","secondary_identifiers":["ICD9:517.2","UMLS:C0339904","MEDGEN:573414","SCTID:196133001","DOID:1578"],"synonyms":[{"name":"lung disease with systemic sclerosis","type":"exact"},{"name":"lung involvement in systemic sclerosis","type":"exact"},{"name":"scleroderma lung disease","type":"exact"},{"name":"scleroderma of lung","type":"related"}],"termid":"MONDO:0002047","xrefs":{"Monarch":{"xref_id":"0002047"}}}


id: FYPO:0008190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at the centromere central core is increased during the meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere central core during meiotic prophase I","termid":"FYPO:0008190"}


id: MONDO:0024251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological syndrome caused by severe mercury poisoning.","definition_xrefs":["Wikipedia:Minamata_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mercury poisoning","termid":"MONDO:0018020"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minamata disease","secondary_identifiers":["SCTID:39640004","UMLS:C0086626","MEDGEN:43368"],"synonyms":[{"name":"Chisso-Minamata disease","type":"exact"}],"termid":"MONDO:0024251","xrefs":{"Monarch":{"xref_id":"0024251"}}}


id: MONDO:0015096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hypofibrinogenemia is a coagulation disorder characterized by mild bleeding symptoms following trauma or surgery due to a reduced plasma fibrinogen concentration.","definition_xrefs":["Orphanet:101041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital afibrinogenemia","termid":"MONDO:0008737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial hypofibrinogenemia","secondary_identifiers":["GARD:2887","UMLS:C5681803","MEDGEN:1826143"],"synonyms":[{"name":"hypofibrinogenemia, familial","type":"related"}],"termid":"MONDO:0015096","xrefs":{"Monarch":{"xref_id":"0015096"}}}


id: PBO:0065724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 1","termid":"PBO:0065724"}


id: GO:0019833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of ice crystals in extracellular fluid at relatively high temperatures (up to -2 degrees Celsius) to protect the organism from damage by intracellular ice formation. This process is commonly found in certain bacteria, such as Pseudomonas syringae, and plays roles in environmental adaptation and plant pathogenesis.","definition_xrefs":["GOC:cjm","UniProt:KW-0387","PMID:35551271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ice binding","termid":"GO:0050825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ice nucleation activity","secondary_identifiers":["TC:9.B.133.1.1"],"termid":"GO:0019833"}


id: PBO:0060742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 7","termid":"PBO:0060742"}


id: GO:0044616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism induces paralysis in another organism via the action of a venom. Paralysis is the loss of the ability to voluntarily control muscles. This can occur by blocking nerve signals at the neuromuscular junction or by directly interfering with muscle contraction.","definition_xrefs":["PMID:36668869","PMID:28422078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of nervous system process","termid":"GO:0140136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated paralysis","synonyms":[{"name":"envenomation resulting in paralysis in another organism","type":"exact"},{"name":"modulation of relaxation of muscle in another organism","type":"related"},{"name":"modulation of relaxation of muscle in other organism","type":"exact"},{"name":"regulation of relaxation of muscle in other organism","type":"exact"}],"termid":"GO:0044616"}


