# terms

id: GO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + calmodulin L-lysine = S-adenosyl-L-homocysteine + calmodulin N6-methyl-L-lysine.","definition_xrefs":["EC:2.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"calmodulin-lysine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.60-RXN","RHEA:21556","Reactome:R-HSA-6786205"],"synonyms":[{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:calmodulin-L-lysine N6-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:calmodulin (lysine) N-methyltransferase activity","type":"related"}],"termid":"GO:0018025"}


id: PBO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 2","termid":"PBO:0048631"}


id: PBO:0087189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC23; common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit","termid":"PBO:0087189"}


id: PBO:0038303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"date_version","termid":"PBO:0038303"}


id: PBO:0054109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1474","termid":"PBO:0054109"}


id: MONDO:0003292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm arising from the anus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum leiomyoma","termid":"MONDO:0004125"},{"relation_name":"is_a","term_name":"benign neoplasm of anus","termid":"MONDO:0021469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus leiomyoma","secondary_identifiers":["NCIT:C5608","UMLS:C1332266","DOID:5134","MEDGEN:231369"],"synonyms":[{"name":"anal leiomyoma","type":"exact"},{"name":"anus leiomyoma","type":"exact"},{"name":"leiomyoma of anus","type":"exact"},{"name":"leiomyoma of the anus","type":"exact"}],"termid":"MONDO:0003292","xrefs":{"Monarch":{"xref_id":"0003292"}}}


id: PBO:0074942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 107","termid":"PBO:0074942"}


id: PBO:0063020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase","termid":"PBO:0063020"}


id: GO:1904316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["PMID:9321918","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"response to PAF","type":"exact"},{"name":"response to platelet-activating factor","type":"exact"}],"termid":"GO:1904316"}


id: PBO:0114378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA binding protein, human SMAP ortholog, implicated in mRNA processing","termid":"PBO:0114378"}


id: GO:0007087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which nuclear pore complexes reform during mitotic cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore complex assembly","termid":"GO:0051292"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0065003","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear pore complex reassembly","termid":"GO:0007087"}


id: PBO:0051426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-4 (pseudogene)","termid":"PBO:0051426"}


id: GO:1904744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:TermGenie","GOC:nc","PMID:24415760","GO_REF:0000059","GOC:BHF","GOC:BHF_telomere"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric DNA binding (obsolete GO:1904744)","synonyms":[{"name":"activation of telomere binding","type":"narrow"},{"name":"activation of telomeric DNA binding","type":"narrow"},{"name":"activation of telomeric repeat binding","type":"narrow"},{"name":"positive regulation of telomere binding","type":"exact"},{"name":"positive regulation of telomeric repeat binding","type":"exact"},{"name":"up regulation of telomere binding","type":"exact"},{"name":"up regulation of telomeric DNA binding","type":"exact"},{"name":"up regulation of telomeric repeat binding","type":"exact"},{"name":"up-regulation of telomere binding","type":"exact"},{"name":"up-regulation of telomeric DNA binding","type":"exact"},{"name":"up-regulation of telomeric repeat binding","type":"exact"},{"name":"upregulation of telomere binding","type":"exact"},{"name":"upregulation of telomeric DNA binding","type":"exact"},{"name":"upregulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904744"}


id: GO:0050692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's DNA binding domain (DBD).","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"DNA binding domain binding","synonyms":[{"name":"DBD binding","type":"exact"}],"termid":"GO:0050692"}


id: GO:1902392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of exodeoxyribonuclease activity (obsolete GO:1902392)","termid":"GO:1902392"}


id: PBO:0084129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexokinase isoenzyme 1; a cytosolic protein that catalyzes phosphorylation of glucose during glucose metabolism; expression is highest during growth on non-glucose carbon sources; glucose-induced repression involves hexokinase Hxk2p; HXK1 has a paralog, HXK2, that arose from the whole genome duplication","termid":"PBO:0084129"}


id: PBO:0085897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the mitotic spindle; overexpression of YKR041W affects endocytic protein trafficking","termid":"PBO:0085897"}


id: SO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Describes the natural sequence variants due to polymorphisms, disease-associated mutations, RNA editing and variations between strains, isolates or cultivars.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"natural_variant_site","secondary_identifiers":["BS:00071"],"synonyms":[{"name":"natural_variant","type":"broad"},{"name":"sequence variation","type":"broad"},{"name":"variant","type":"broad"}],"termid":"SO:0001147"}


id: GO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"}


id: PBO:0031515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding","termid":"PBO:0031515"}


id: GO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell in response to the presence of vascular endothelial growth factor (VEGF).","definition_xrefs":["GOC:rph","GOC:BHF","PMID:21885851","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}


id: PBO:0049682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase","termid":"PBO:0049682"}


id: PBO:0081178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 28","termid":"PBO:0081178"}


id: PBO:0058386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4758","termid":"PBO:0058386"}


id: PBO:0076806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 3","termid":"PBO:0076806"}


id: PBO:0089175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23","termid":"PBO:0089175"}


id: MONDO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the common peroneal nerve or its branches, the deep and superficial peroneal nerves. Lesions of the deep peroneal nerve are associated with paralysis of dorsiflexion of the ankle and toes and loss of sensation from the web space between the first and second toe. Lesions of the superficial peroneal nerve result in weakness or paralysis of the peroneal muscles (which evert the foot) and loss of sensation over the dorsal and lateral surface of the leg. Traumatic injury to the common peroneal nerve near the head of the fibula is a relatively common cause of this condition. (From Joynt, Clinical Neurology, 1995, Ch51, p31)","definition_xrefs":["MESH:D020427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"peroneal neuropathy","secondary_identifiers":["DOID:4201","NCIT:C27596","UMLS:C0747533","MEDGEN:148182"],"synonyms":[{"name":"peroneal neuropathy","type":"exact"}],"termid":"MONDO:0002910","xrefs":{"Monarch":{"xref_id":"0002910"}}}


id: PATO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000736 dysfunctional value (obsolete PATO:0000736)","termid":"PATO:0000736"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: PBO:0068268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 4","termid":"PBO:0068268"}


id: PR:P22190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cox1 intron-2 37.2 kDa protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.03","synonyms":[{"name":"Spom972h-SPMIT.03","type":"exact"},{"name":"maturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22190"}


id: MONDO:0971116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline vascular tumor","secondary_identifiers":["Orphanet:673473","MEDGEN:1864024","UMLS:C5925087"],"termid":"MONDO:0971116","xrefs":{"Monarch":{"xref_id":"0971116"}}}


id: MONDO:0003474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of ependymoma, often found in the spinal cord, with tumor cells arranged in fascicles of variable width and cell density. Ependymal rosettes are generally absent, so this lesion must be distinguished from astrocytic neoplasms, but its EM characteristics are ependymal. (Adapted from WHO.)","definition_xrefs":["NCIT:C6903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tanycytic ependymoma","secondary_identifiers":["MEDGEN:237159","UMLS:C1370500","DOID:5504"],"synonyms":[{"name":"tanycytic ependymoma","type":"exact"}],"termid":"MONDO:0003474","xrefs":{"Monarch":{"xref_id":"0003474"}}}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_01787","SJAG_05001","SJAG_04771","SJAG_04483","SJAG_00218","SJAG_01255","SJAG_01171","SJAG_04659","SJAG_03705","SJAG_01290","SJAG_04462","SJAG_05285","SJAG_04668","SJAG_02192","SJAG_00876","SJAG_03587","SJAG_01835","SJAG_02222","SJAG_01453","SJAG_03123","SJAG_00610","SJAG_04666","SJAG_03646","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[74766,108074,93490,115173,72818,76285,117841,77638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104588,80008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[97014,103888,110047,103889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[89378,94313],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[69405,107309,92652,120072,107883,94297,119939],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: MONDO:0011983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to, 4","secondary_identifiers":["MEDGEN:334080","OMIM:608176","UMLS:C1842443"],"synonyms":[{"name":"AITD4","type":"related"},{"name":"autoimmune thyroid disease, susceptibility to, 4","type":"exact"},{"name":"autoimmune thyroid disease, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0011983","xrefs":{"Monarch":{"xref_id":"0011983"}}}


id: PBO:0060421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase like 2","termid":"PBO:0060421"}


id: GO:0010646
data:
  {"annotated_genes":["SJAG_03893","SJAG_01805","SJAG_01787","SJAG_02233","SJAG_01983","SJAG_01032","SJAG_00143","SJAG_04522","SJAG_02169","SJAG_03353","SJAG_03974","SJAG_02451","SJAG_00318","SJAG_02183","SJAG_01184","SJAG_02231","SJAG_03799","SJAG_03907","SJAG_04496","SJAG_03263","SJAG_04910","SJAG_00781","SJAG_06622","SJAG_03681","SJAG_06592","SJAG_03568","SJAG_03355","SJAG_01837","SJAG_01978","SJAG_03486","SJAG_02392","SJAG_03928","SJAG_03072","SJAG_02135","SJAG_02858","SJAG_01790","SJAG_00875","SJAG_01187","SJAG_03969","SJAG_06270","SJAG_03678","SJAG_02424","SJAG_03048","SJAG_01885","SJAG_00990","SJAG_00845","SJAG_00229","SJAG_00883","SJAG_03327","SJAG_00526","SJAG_00991","SJAG_00975","SJAG_00610","SJAG_04551","SJAG_01199","SJAG_02013","SJAG_03371","SJAG_04825","SJAG_00293","SJAG_02311","SJAG_01464","SJAG_02514","SJAG_04666","SJAG_03705","SJAG_05346","SJAG_01679","SJAG_00082","SJAG_01297","SJAG_04329","SJAG_02426","SJAG_00027","SJAG_03501","SJAG_05030","SJAG_00424","SJAG_02765","SJAG_04249","SJAG_01253","SJAG_00209","SJAG_03453","SJAG_03828","SJAG_04235","SJAG_00457","SJAG_00289","SJAG_02682","SJAG_00561","SJAG_00642","SJAG_03592","SJAG_01386","SJAG_01181","SJAG_06621","SJAG_03405","SJAG_02945","SJAG_03185","SJAG_05184","SJAG_06588","SJAG_03508","SJAG_01245","SJAG_02379","SJAG_03089","SJAG_01114","SJAG_04259","SJAG_04455","SJAG_00824","SJAG_01632","SJAG_00078","SJAG_02389","SJAG_02605","SJAG_02878","SJAG_03488","SJAG_02481","SJAG_04462","SJAG_03126","SJAG_04776","SJAG_02000","SJAG_01142","SJAG_03631","SJAG_01150","SJAG_03903","SJAG_02486","SJAG_00688","SJAG_00169","SJAG_02336","SJAG_04943","SJAG_01587","SJAG_04206","SJAG_03936","SJAG_00600","SJAG_00266","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105842,113964,116288,92604,109204,101518,115795,117922,110234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[109947,93982,118403,94643,102376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[102935,118150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[109585,101367,109017,97763,105750,120364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[104791,91315,104088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[96095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[119108,97885,96945,101369,120365,93558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[109110,90076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[95215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[74090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[94736,112161,74671,94821,95350,103215,109072,92608,97550,101520,109515,117925,107007,109205,93627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[93128,113714,107864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[74934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[75420,118151,119071,104960,101502,118507,109122,111258,100802,120268,120075,111665,98013,95221,81719,62862,75313,89888,107097,115992,103399,115168,116595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[112978,104091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[92650,94310,119938,89950,91316,69403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[115800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[110931,110929,120328,119400,110932,114489,110927,110930,110926,97171,113823,110928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[105651,90012,116643,117611,92731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[104333,89396,91882,112520,95703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[80213,62232,115449,115450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[74773,70926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[96215,75766,77681,112536,114871,90181,77168,74298,78221,78560,98014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[108967,99671,93082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[76490,82223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043408"},{"annotations":[103283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[71763,76644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[115377,91843,106458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"},{"annotations":[95949,94788,109824,117504,119826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":129,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00078":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00561":null,"SJAG_00600":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00688":null,"SJAG_00781":null,"SJAG_00824":null,"SJAG_00845":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01199":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01679":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02169":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02389":null,"SJAG_02392":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02486":null,"SJAG_02514":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03488":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03568":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03705":null,"SJAG_03799":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04496":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06270":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010646","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032007":null,"GO:0032008":null,"GO:0032483":null,"GO:0035024":null,"GO:0043408":null,"GO:0046580":null,"GO:0050850":null,"GO:0062038":null,"GO:0090029":null,"GO:0090267":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1900745":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903139":null,"GO:1903432":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null,"GO:1905325":null,"GO:1905326":null,"GO:2000639":null,"GO:2000640":null}}


id: MONDO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the ethmoid sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinus cancer","termid":"MONDO:0001763"},{"relation_name":"is_a","term_name":"paranasal sinus squamous cell carcinoma","termid":"MONDO:0044705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus squamous cell carcinoma","secondary_identifiers":["UMLS:C1333477","MEDGEN:272596","SCTID:707359008","DOID:2763","NCIT:C6065"],"synonyms":[{"name":"epidermoid carcinoma of ethmoid sinus","type":"exact"},{"name":"epidermoid carcinoma of ethmoidal sinus","type":"exact"},{"name":"epidermoid carcinoma of the ethmoid sinus","type":"exact"},{"name":"epidermoid carcinoma of the ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus epidermoid carcinoma","type":"exact"},{"name":"ethmoid sinus squamous cell carcinoma","type":"exact"},{"name":"ethmoidal sinus epidermoid carcinoma","type":"exact"},{"name":"ethmoidal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of ethmoid sinus","type":"exact"},{"name":"squamous cell carcinoma of ethmoidal sinus","type":"exact"},{"name":"squamous cell carcinoma of the ethmoid sinus","type":"exact"},{"name":"squamous cell carcinoma of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0002416","xrefs":{"Monarch":{"xref_id":"0002416"}}}


id: MONDO:0010438
data:
  {"annotated_genes":["SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88763],"is_not":false,"summary":null,"term":"MONDO:0010438"}]},"cv_name":"mondo","definition":"Any paroxysmal nocturnal hemoglobinuria in which the cause of the disease is a mutation in the PIGA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal nocturnal hemoglobinuria","termid":"MONDO:0100244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005570","MONDO:0002280","MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"paroxysmal nocturnal hemoglobinuria 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:813000","OMIM:300818","UMLS:C3806670"],"synonyms":[{"name":"PIGA paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"PNH1","type":"related"},{"name":"pIgA paroxysmal nocturnal hemoglobinuria","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria 1","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria caused by mutation in PIGA","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria caused by mutation in pIgA","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria type 1","type":"exact"},{"name":"paroxysmal nocturnal hemoglobinuria, somatic","type":"exact"}],"termid":"MONDO:0010438","terms_by_termid":{"MONDO:0010438":null},"xrefs":{"Monarch":{"xref_id":"0010438"}}}


id: FYPO:0006150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing etoposide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on etoposide","synonyms":[{"name":"normal cell population growth in presence of etoposide","type":"exact"},{"name":"normal cell population growth on etoposide","type":"exact"},{"name":"normal cellular response to etoposide","type":"related"},{"name":"normal vegetative cell population growth on etoposide","type":"exact"}],"termid":"FYPO:0006150"}


id: GO:0006009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into glucose 1-phosphate to produce glucose bisphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"glucose 1-phosphate metabolic process","termid":"GO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose 1-phosphate phosphorylation","termid":"GO:0006009"}


id: FYPO:0000368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal vacuolar morphology during vegetative growth","synonyms":[{"name":"abnormal vacuolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0000368"}


id: MONDO:0971033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma composed of groups of carcinoma cells with thymic epithelial differentiation.","definition_xrefs":["DOID:0081457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intrathyroid thymic carcinoma","secondary_identifiers":["MEDGEN:316474","UMLS:C1704613"],"termid":"MONDO:0971033","xrefs":{"Monarch":{"xref_id":"0971033"}}}


id: PBO:0083577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083577"}


id: PBO:0068231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 2","termid":"PBO:0068231"}


id: PATO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's having balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanced","termid":"PATO:0000757"}


id: MONDO:0100565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of alpha thalessemia spectrum that is caused by an inherited monogenomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha thalassemia spectrum","termid":"MONDO:0011399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monogenic alpha thalassemia spectrum","termid":"MONDO:0100565","xrefs":{"Monarch":{"xref_id":"0100565"}}}


id: FYPO:0000062
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121390,121385,121371,121392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[121241,121246,121249,121234,121233,121237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[121226],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"},{"relation_name":"output_of","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear morphology during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"secondary_identifiers":["FYPO:0000259"],"single_locus_annotated_genes":["SJAG_02763","SJAG_03449","SJAG_01745","SJAG_01906","SJAG_03940","SJAG_04464"],"single_locus_genotype_uniquenames":["ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","lem2delta","ned1delta","nem2delta","nem1delta"],"synonyms":[{"name":"abnormal nuclear morphology during mitotic cell cycle","type":"related"},{"name":"deformed nucleus during vegetative growth","type":"exact"},{"name":"nuclear morphology defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000062","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: PR:Q9UST3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 52 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.11","secondary_identifiers":["UniProtKB:Q9UST3"],"synonyms":[{"name":"Spom972h-VPS52","type":"exact"}],"termid":"PR:Q9UST3"}


id: PBO:0067214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 280, pseudogene","termid":"PBO:0067214"}


id: GO:0045092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-18; comprises an alpha and a beta subunit.","definition_xrefs":["PMID:12759435","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-18 receptor complex","synonyms":[{"name":"IL-18 receptor complex","type":"exact"}],"termid":"GO:0045092"}


id: MONDO:0019720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal or urinary tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic renal or urinary tract malformation (obsolete MONDO:0019720)","secondary_identifiers":["Orphanet:93546"],"synonyms":[{"name":"isolated congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"isolated renal or urinary tract malformation","type":"related"},{"name":"nonsyndromic congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"nonsyndromic renal or urinary tract malformation","type":"exact"}],"termid":"MONDO:0019720","xrefs":{"Monarch":{"xref_id":"0019720"}}}


id: MONDO:0009469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign recurrent intrahepatic cholestasis 1 (BRIC1) is characterized by episodes of liver dysfunction called cholestasis, during which the liver cells have a reduced ability to release a digestive fluid called bile. These episodes can last from weeks to months, and the time between them, during which there are usually no symptoms, can vary from weeks to years.Most people with BRIC1have their first episode of cholestasisintheir teens or twenties. Symptoms oftenpresent with severe itchiness, followed by yellowing of the skin and whites of the eyes (jaundice) a few weeks later. BRIC1 is caused by mutations in the ATP8B1 gene. This condition is inherited in an autosomal recessive pattern.BRIC1generally does not cause lasting damage to the liver. However, in rare cases, episodes of liver dysfunction may develop into a more severe, permanent form of liver disease known as progressive familial intrahepatic cholestasis (PFIC). BRIC and PFIC are sometimes considered to be part of a spectrum of intrahepatic cholestasis disorders of varying severity.","definition_xrefs":["GARD:0010028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"},{"relation_name":"is_a","term_name":"benign recurrent intrahepatic cholestasis","termid":"MONDO:0019008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"benign recurrent intrahepatic cholestasis type 1","secondary_identifiers":["MEDGEN:1637492","Orphanet:99960","UMLS:C4551899","OMIM:243300","DOID:0070231","GARD:10028"],"synonyms":[{"name":"ATP8B1 benign recurrent intrahepatic cholestasis","type":"exact"},{"name":"BRIC1","type":"exact"},{"name":"Bric type 1","type":"exact"},{"name":"Summerskill syndrome","type":"related"},{"name":"benign recurrent intrahepatic cholestasis 1","type":"related"},{"name":"benign recurrent intrahepatic cholestasis caused by mutation in ATP8B1","type":"exact"},{"name":"cholestasis, benign recurrent intrahepatic","type":"broad"},{"name":"cholestasis, benign recurrent intrahepatic 1","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic, 1","type":"related"},{"name":"cholestasis, benign recurrent intrahepatic, type 1","type":"exact"},{"name":"mild ATP8B1 deficiency","type":"related"},{"name":"recurrent familial intrahepatic cholestasis 1","type":"related"}],"termid":"MONDO:0009469","xrefs":{"Monarch":{"xref_id":"0009469"}}}


id: MONDO:0975839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic agenesis","termid":"MONDO:0009832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic agenesis 3","secondary_identifiers":["OMIM:620991"],"termid":"MONDO:0975839","xrefs":{"Monarch":{"xref_id":"0975839"}}}


id: MONDO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Death of pulp tissue with or without bacterial invasion. When the necrosis is due to ischemia with superimposed bacterial infection, it is referred to as pulp gangrene. When the necrosis is non-bacterial in origin, it is called pulp mummification.","definition_xrefs":["MESH:D003790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp necrosis","secondary_identifiers":["UMLS:C0011407","ICD10CM:K04.1","ICD9:522.1","MEDGEN:8306","DOID:11623","SCTID:42711005"],"synonyms":[{"name":"necrosis of pulp","type":"exact"},{"name":"necrosis of the pulp","type":"exact"},{"name":"necrotic pulp","type":"exact"},{"name":"pulp necrosis","type":"exact"}],"termid":"MONDO:0001326","xrefs":{"Monarch":{"xref_id":"0001326"}}}


id: PBO:0025487
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase deficiency","termid":"PBO:0025487"}


id: PBO:0039424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 4","termid":"PBO:0039424"}


id: PBO:0062964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 7","termid":"PBO:0062964"}


id: MONDO:0024348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pityriasis capitis (obsolete MONDO:0024348)","secondary_identifiers":["SCTID:400201008"],"synonyms":[{"name":"pityriasis capitis","type":"exact"}],"termid":"MONDO:0024348","xrefs":{"Monarch":{"xref_id":"0024348"}}}


id: FYPO:0001880
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[121280,121272,121273,121284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to cell division site","type":"exact"},{"name":"abolished protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abolished protein recruitment to cell division site","type":"related"},{"name":"protein localization to cell division site abolished","type":"exact"}],"termid":"FYPO:0001880","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: GO:0050067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + O2 = 5-aminopentanamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.2","RHEA:14601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lysine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00449","MetaCyc:LYSINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-lysine-2-monooxygenase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"lysine monooxygenase activity","type":"related"},{"name":"lysine oxygenase activity","type":"related"}],"termid":"GO:0050067"}


id: GO:0090023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil migration","termid":"GO:1902624"},{"relation_name":"positively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil chemotaxis","termid":"GO:0090023"}


id: PBO:0086967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit B of protein phosphatase 2A (PP2A); Zds1p/2p-dependent localization to cytoplasm promotes mitotic entry; localization to nucleus prevents mitotic exit; required for correct nuclear division, chromosome segregation during achiasmate meiosis; maintains nucleolar sequestration of Cdc14p in early meiosis; limits formation of PP2A-Rts1p holocomplexes to ensure timely dissolution of sister chromosome cohesion; controls phosphorylation and stability of Cln2p; homolog of mammalian B55","termid":"PBO:0086967"}


id: PBO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated proten Vts1 (predicted)","termid":"PBO:0001393"}


id: MONDO:0022482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein C 2i deficiency (obsolete MONDO:0022482)","termid":"MONDO:0022482","xrefs":{"Monarch":{"xref_id":"0022482"}}}


id: PBO:0072095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 26","termid":"PBO:0072095"}


id: FYPO:0008245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at one or more specific promoter elements is normal  (i.e. indistinguishable from wild type) during vegetative growth.","definition_xrefs":["PMID:27538348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at gene promoter region","termid":"FYPO:0008245"}


id: PBO:0060032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 20","termid":"PBO:0060032"}


id: MONDO:0007380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type I lattice corneal dystrophy (LCDI) is a frequent form of stromal corneal dystrophy characterized by a network of delicate interdigitating branching filamentous opacities within the cornea with progressive visual impairment and no systemic manifestations.","definition_xrefs":["Orphanet:98964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"lattice corneal dystrophy","termid":"MONDO:0004686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lattice corneal dystrophy type I","secondary_identifiers":["SCTID:419197009","UMLS:C1690006","MEDGEN:305533","MESH:C537881","GARD:9678","OMIM:122200"],"synonyms":[{"name":"Biber-Haab-Dimmer dystrophy","type":"exact"},{"name":"CDL1","type":"related"},{"name":"LCD","type":"related"},{"name":"LCD1","type":"exact"},{"name":"LCDI","type":"exact"},{"name":"Lcd1","type":"exact"},{"name":"classic lattice corneal dystrophy","type":"exact"},{"name":"corneal dystrophy, lattice type 1","type":"related"},{"name":"corneal dystrophy, lattice type I","type":"related"},{"name":"lattice corneal dystrophy type 1","type":"exact"},{"name":"lattice corneal dystrophy, type 1","type":"related"}],"termid":"MONDO:0007380","xrefs":{"Monarch":{"xref_id":"0007380"}}}


id: PBO:0048603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 4 homolog","termid":"PBO:0048603"}


id: PBO:0088974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas1","termid":"PBO:0088974"}


id: GO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate catabolic process","synonyms":[{"name":"purine ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034037"}


id: PBO:0030993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_salt_stress","termid":"PBO:0030993"}


id: FYPO:0002923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is normal (i.e. indistinguishable from wild type). Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"normal histone H2B conserved C-terminal lysine ubiquitination during vegetative growth","type":"exact"},{"name":"normal histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002923"}


id: PBO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldose reductase ARK13 family YakC","termid":"PBO:0002430"}


id: GO:0050209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polyvinyl alcohol + O2 = oxidized polyvinyl alcohol + H2O2.","definition_xrefs":["MetaCyc:POLYVINYL-ALCOHOL-OXIDASE-RXN","EC:1.1.3.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"polyvinyl-alcohol oxidase activity","secondary_identifiers":["RHEA:21688"],"synonyms":[{"name":"PVA oxidase activity","type":"related"},{"name":"dehydrogenase, polyvinyl alcohol","type":"related"},{"name":"polyvinyl-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050209"}


id: PBO:0065882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB32, member RAS oncogene family","termid":"PBO:0065882"}


id: MONDO:0020391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary artery coming from the aorta (PACA) is a cardiac malformation characterized by anomalous origin of one branch of the pulmonary arteries from the ascending aorta and a normal origin of the other pulmonary artery from the right ventricular outflow tract, and presenting with respiratory distress, congestive heart failure and failure to thrive within the first days/months of life.","definition_xrefs":["Orphanet:99050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery coming from the aorta","secondary_identifiers":["MEDGEN:824773","UMLS:C3838927","GARD:4586","NANDO:2200281"],"synonyms":[{"name":"abnormal origin of right or left pulmonary artery from the aorta","type":"exact"},{"name":"hemitruncus arteriosus","type":"exact"}],"termid":"MONDO:0020391","xrefs":{"Monarch":{"xref_id":"0020391"}}}


id: GO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: GO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate.","definition_xrefs":["EC:3.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"arylesterase activity","secondary_identifiers":["UM-BBD_reactionID:r0757","MetaCyc:ARYLESTERASE-RXN","RHEA:17309"],"synonyms":[{"name":"A-esterase activity","type":"broad"},{"name":"aromatic esterase","type":"narrow"},{"name":"aryl-ester hydrolase","type":"narrow"},{"name":"paraoxonase activity","type":"broad"}],"termid":"GO:0004064"}


id: RO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p directly activates q if and only if p is immediately upstream of q and p is the realization of a function to increase the rate or activity of q","direct_ancestors":[{"relation_name":"is_a","term_name":"positively_regulates","termid":"RO:0002213"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_activates","termid":"RO:0002407"}


id: PBO:0077527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 241","termid":"PBO:0077527"}


id: FYPO:0004255
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, is elongated, and is inviable.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"elongated mononucleate vegetative cell","termid":"FYPO:0001916"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable elongated mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate vegetative cell","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0004255","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: SO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A left handed helix is a region of peptide where the coiled conformation turns in an anticlockwise, left handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"left_handed_peptide_helix","secondary_identifiers":["BS:00222"],"synonyms":[{"name":"helix-l","type":"related"},{"name":"left handed helix","type":"exact"}],"termid":"SO:0001115"}


id: PBO:0040202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog 1","termid":"PBO:0040202"}


id: PBO:0077173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 2","termid":"PBO:0077173"}


id: MONDO:0018659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 19","termid":"MONDO:0016937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 19","secondary_identifiers":["GARD:21876","UMLS:C4518508","Orphanet:447985","MEDGEN:1380854"],"synonyms":[{"name":"partial duplication of chromosome 19p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 19","type":"exact"},{"name":"partial trisomy of chromosome 19p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 19","type":"exact"}],"termid":"MONDO:0018659","xrefs":{"Monarch":{"xref_id":"0018659"}}}


id: GO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host ethylene-mediated defense response (obsolete GO:0052076)","synonyms":[{"name":"activation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"positive regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"stimulation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052076"}


id: MONDO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervix small cell carcinoma (obsolete MONDO:0003981)","termid":"MONDO:0003981","xrefs":{"Monarch":{"xref_id":"0003981"}}}


id: MONDO:0031230
data:
  {"annotated_genes":["SJAG_07005","SJAG_01671","SJAG_02398","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030935"},{"annotations":[87420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030937"},{"annotations":[87392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030974"},{"annotations":[88040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100294"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex II deficiency, nuclear type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:252011"],"termid":"MONDO:0031230","terms_by_termid":{"MONDO:0030935":null,"MONDO:0030937":null,"MONDO:0030974":null,"MONDO:0100294":null},"xrefs":{"Monarch":{"xref_id":"0031230"}}}


id: PBO:0058759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6883","termid":"PBO:0058759"}


id: MONDO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis","secondary_identifiers":["OMIM:265500","MEDGEN:408291","UMLS:C1956257","GARD:10071","HP:0001642"],"synonyms":[{"name":"pulmonary stenosis","type":"exact"},{"name":"pulmonic stenosis","type":"exact"},{"name":"pulmonic stenosis (disease)","type":"exact"},{"name":"valvular pulmonic stenosis","type":"related"}],"termid":"MONDO:0009938","xrefs":{"Monarch":{"xref_id":"0009938"}}}


id: PBO:0067478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 610, pseudogene","termid":"PBO:0067478"}


id: GO:0022606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the polarity of a cell along its proximal/distal axis.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of monopolar cell polarity","termid":"GO:0061162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"}


id: PBO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh3","termid":"PBO:0002810"}


id: GO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide biosynthetic process","termid":"GO:0043607"}


id: MOD:01105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-bromobenzyloxycarbonyl","synonyms":[{"name":"BrZ","type":"exact"}],"termid":"MOD:01105"}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: PR:O74956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit S8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.10c","synonyms":[{"name":"Spom972h-mrps8","type":"exact"}],"termid":"PR:O74956"}


id: PBO:0028663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gross_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0028663"}


id: GO:0061213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mesonephros development. Mesonephros development is the process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesonephros development","termid":"GO:0061217"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesonephros development","termid":"GO:0061213"}


id: PBO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase like 1","termid":"PBO:0071972"}


id: PR:Q92377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm12 gene.","definition_xrefs":["UniProtKB:Q92377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.06c","synonyms":[{"name":"Spom972h-mdm12","type":"exact"},{"name":"mitochondrial inheritance component mdm12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92377"}


id: PBO:0062827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor family member 2","termid":"PBO:0062827"}


id: PBO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AS member 1","termid":"PBO:0062224"}


id: MONDO:0014962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MBOAT7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 57","secondary_identifiers":["MEDGEN:934640","DOID:0081219","GARD:22575","OMIM:617188","UMLS:C4310673"],"synonyms":[{"name":"MBOAT7 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT57","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MBOAT7","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 57","type":"exact"},{"name":"intellectual disability, autosomal recessive 57","type":"exact"},{"name":"intellectual disability, autosomal recessive type 57","type":"exact"},{"name":"mental retardation, autosomal recessive 57","type":"exact"},{"name":"mental retardation, autosomal recessive type 57","type":"exact"}],"termid":"MONDO:0014962","xrefs":{"Monarch":{"xref_id":"0014962"}}}


id: PBO:0055199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2624","termid":"PBO:0055199"}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: FYPO:0007874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which exocytosis occurs to a lower extent than normal at the shmoo tip.","definition_xrefs":["PMID:34382996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal exocytosis","termid":"FYPO:0007873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased exocytosis at shmoo tip","synonyms":[{"name":"decreased exocytosis at mating projection tip","type":"exact"},{"name":"decreased exocytosis at shmoo projection","type":"exact"},{"name":"reduced exocytosis at shmoo tip","type":"exact"}],"termid":"FYPO:0007874"}


id: PBO:0079731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 8 (pseudogene)","termid":"PBO:0079731"}


id: MOD:01629
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms cyclo[(prolylserin)-O-yl] cysteinate by the natural process of cross-linking an L-cysteine residue an L-proline residue, and an L-serine residue, or by effectively modifying a cysteine residue.","definition_xrefs":["PubMed:7961166","RESID:AA0489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01629"}


id: GO:0010187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of seed germination.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"negatively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed germination","synonyms":[{"name":"down regulation of seed germination","type":"exact"},{"name":"down-regulation of seed germination","type":"exact"},{"name":"downregulation of seed germination","type":"exact"},{"name":"inhibition of seed germination","type":"narrow"}],"termid":"GO:0010187"}


id: GO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.1","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine/arginine/lysine/ornithine porter activity (obsolete GO:0015597)","synonyms":[{"name":"histidine/arginine/lysine/ornithine porter activity","type":"exact"}],"termid":"GO:0015597"}


id: PBO:0088409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak1","termid":"PBO:0088409"}


id: PBO:0088304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element protein Mug20","termid":"PBO:0088304"}


id: PBO:0073042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleraxis bHLH transcription factor","termid":"PBO:0073042"}


id: GO:0097243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonoid, a compound containing two or more aromatic rings, each bearing at least one aromatic hydroxyl and connected with a carbon bridge.","definition_xrefs":["PMID:20599706","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavonoid binding","termid":"GO:0097243"}


id: MONDO:0012360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital hypothyroidism characterized by autosomal dominant inheritance of resistance to thyrotropin that has material basis in variation in the chromosome region 15q25.3-q26.1.","definition_xrefs":["DOID:0070127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"},{"relation_name":"is_a","term_name":"peripheral resistance to thyroid hormones","termid":"MONDO:0019995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nongoitrous hypothyroidism 3","secondary_identifiers":["MESH:C567935","MEDGEN:424853","UMLS:C2940785","OMIM:609893"],"synonyms":[{"name":"CHNG3","type":"exact"},{"name":"congenital nongoitrous hypothyroidism 3","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 3","type":"exact"},{"name":"resistance to thyrotropin","type":"related"},{"name":"thyrotropin resistance","type":"related"}],"termid":"MONDO:0012360","xrefs":{"Monarch":{"xref_id":"0012360"}}}


id: GO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic diphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inorganic diphosphate transport","synonyms":[{"name":"inorganic pyrophosphate transport","type":"exact"}],"termid":"GO:0030505"}


id: PBO:0042511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 5","termid":"PBO:0042511"}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: PBO:0030337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_nitrogen_starvation","termid":"PBO:0030337"}


id: PBO:0051113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-69","termid":"PBO:0051113"}


id: PR:Q9UUA1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUA1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23B6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.01c","synonyms":[{"name":"Spom972h-SPCC23B6.01c","type":"exact"}],"termid":"PR:Q9UUA1"}


id: GO:0052534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of induced systemic resistance in the symbiont organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of induced systemic resistance in symbiont (obsolete GO:0052534)","synonyms":[{"name":"positive regulation by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052534"}


id: GO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR1 chemokine receptor.","definition_xrefs":["GOC:ceb","PMID:11910892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-8 receptor binding","termid":"GO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CXCR1 chemokine receptor binding","synonyms":[{"name":"CXCR1 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0045237"}


id: GO:0015184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-cystine from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:go_curators","GOC:mtg_transport","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-cystine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5340130"],"synonyms":[{"name":"L-cystine transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015184"}


id: GO:0140474
data:
  {"annotated_genes":["SJAG_01305","SJAG_03710","SJAG_03416","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92789,107819,109500,109625],"is_not":false,"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and an ER membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:27875684","PMID:19556461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane adaptor activity","type":"exact"},{"name":"ER-mitochondrion membrane tether activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane adaptor activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane tether activity","type":"exact"},{"name":"mitochondrion-ER membrane adaptor activity","type":"exact"},{"name":"mitochondrion-ER membrane tether activity","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum membrane adaptor activity","type":"exact"}],"termid":"GO:0140474","terms_by_termid":{"GO:0140474":null}}


id: PBO:0017539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly protein Mug65 (predicted)","termid":"PBO:0017539"}


id: PBO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 1","termid":"PBO:0060795"}


id: MONDO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete haemophilus influenzae meningitis (obsolete MONDO:0006775)","termid":"MONDO:0006775","xrefs":{"Monarch":{"xref_id":"0006775"}}}


id: MONDO:0009302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gonadal dysgenesis with multiple anomalies is an association syndrome described only once in two sisters aged 1 1/2 and 8 1/2 years. They had a 46,XY karyotype, cleft lip and palate, preauricular pits, and a 'squashed down' appearance because of a short columella and small nares. Other anomalies included broad hands and feet, and a hypermuscular appearance. Cardiac, renal, musculoskeletal, and ectodermal anomalies were also present. Ectodermal defects included 'punched out scalp defects' and unusual positioning of hair whorls. They also had short stature, streak gonads, and mild developmental delay. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:1770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY type gonadal dysgenesis-associated anomalies syndrome","secondary_identifiers":["MESH:C565536","GARD:2541","MEDGEN:344696","UMLS:C1856272","OMIM:233430"],"synonyms":[{"name":"gonadal dysgenesis XY type associated anomalies","type":"related"},{"name":"gonadal dysgenesis, 10Y type, with associated anomalies","type":"related"},{"name":"gonadal dysgenesis, XY type, with associated anomalies","type":"related"}],"termid":"MONDO:0009302","xrefs":{"Monarch":{"xref_id":"0009302"}}}


id: MONDO:0100608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypophosphatasia in which the cause of the disease is a variant with a dominant negative effect or haploinsufficiency in the ALPL gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"ALPL-related autosomal dominant hypophosphatasia","termid":"MONDO:0100608","xrefs":{"Monarch":{"xref_id":"0100608"}}}


id: GO:0008812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + choline = AH(2) + betaine aldehyde.","definition_xrefs":["EC:1.1.99.1","RHEA:17433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"choline dehydrogenase activity","secondary_identifiers":["MetaCyc:CHD-RXN","Reactome:R-HSA-6797961","KEGG_REACTION:R01025"],"synonyms":[{"name":"choline oxidase activity","type":"broad"},{"name":"choline-cytochrome c reductase activity","type":"related"},{"name":"choline:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"choline:(acceptor) oxidoreductase activity","type":"related"},{"name":"choline:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0008812"}


id: GO:0090474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"arg-arg specific dibasic protein processing","termid":"GO:0090474"}


id: PBO:0039227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT1 substrate 1","termid":"PBO:0039227"}


id: PBO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago-nashi homolog (predicted)","termid":"PBO:0004764"}


id: PBO:0073151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog C, COPII coat complex component","termid":"PBO:0073151"}


id: MONDO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, acquired motor neuron disease characterized by a slowly progressive, unilateral, ascending or descending hemplegia, associated to unilateral or asymmetrical pyramidal signs and no sensory loss. It is a diagnosis of exclusion and contorversy exists regarding whether the presence of bulbar symptoms, sphincter disturbances, fasciculations or cognitive manifestations characterize the disease.","definition_xrefs":["Orphanet:94091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired motor neuron disease","termid":"MONDO:0020129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Mills syndrome","secondary_identifiers":["UMLS:C5191669","MEDGEN:1682801","GARD:19250"],"termid":"MONDO:0035892","xrefs":{"Monarch":{"xref_id":"0035892"}}}


id: GO:0014721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The twitch skeletal muscle responds to neurostimulations with a contraction followed by a relaxation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"twitch skeletal muscle contraction","termid":"GO:0014721"}


id: GO:0032565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dGMP, deoxyguanosine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl deoxyribonucleotide binding","termid":"GO:0032560"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dGMP binding","termid":"GO:0032565"}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: FYPO:0004869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Crb2 accumulates is lower than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:15226425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Crb2 foci during cellular response to ionizing radiation","synonyms":[{"name":"decreased number of Crb2 foci during cellular response to IR","type":"exact"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced number of Crb2 foci during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004869"}


id: PBO:0083680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein that interacts with phospholipid flippase Drs2p; interaction with Cdc50p is essential for Drs2p catalytic activity; mutations affect cell polarity and polarized growth; similar to Lem3p; CDC50 has a paralog, YNR048W, that arose from the whole genome duplication","termid":"PBO:0083680"}


id: PBO:0029638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_ubiquitination","termid":"PBO:0029638"}


id: PBO:0084560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Mba1p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with the mitochondrial large ribosomal subunit and nascent polypeptide chains; null mutant displays increased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084560"}


id: FYPO:0005463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a cytoplasmic microtubule during interphase of the mitotic cell cycle, does not continue until microtubules reach the ends of the cell.","definition_xrefs":["PMID:12894167","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased spatial extent of interphase microtubule polymerization","synonyms":[{"name":"decreased growth of interphase microtubules to cell end","type":"exact"},{"name":"decreased spatial extent of cytoplasmic microtubule polymerization during mitotic interphase","type":"exact"},{"name":"decreased spatial extent of interphase cytoplasmic microtubule polymerization","type":"exact"},{"name":"decreased spatial extent of interphase microtubule growth","type":"exact"},{"name":"decreased spatial extent of interphase microtubule polymerisation","type":"exact"},{"name":"decreased spatial extent of interphase microtubule polymerization","type":"related"}],"termid":"FYPO:0005463"}


id: FYPO:0005584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular diglyceride level","synonyms":[{"name":"decreased cellular DAG level","type":"exact"},{"name":"decreased cellular diacylglycerol level","type":"exact"},{"name":"decreased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"decreased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"decreased diglyceride accumulation","type":"related"},{"name":"reduced cellular diglyceride level","type":"exact"}],"termid":"FYPO:0005584"}


id: FYPO:0006713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of malonyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular malonyl-CoA level","synonyms":[{"name":"increased cellular malonyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular malonyl-CoA level during vegetative growth","type":"exact"},{"name":"increased malonyl-CoA accumulation","type":"related"}],"termid":"FYPO:0006713"}


id: GO:1901932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bicyclogermacrene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene metabolic process","synonyms":[{"name":"bicyclogermacrene metabolism","type":"exact"}],"termid":"GO:1901932"}


id: PBO:0057166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320c-2","termid":"PBO:0057166"}


id: PBO:0082817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial protein of unknown function; processed by both mitochondrial processing peptidase and mitochondrial octapeptidyl aminopeptidase; gene contains the nested antisense gene NAG1","termid":"PBO:0082817"}


id: MONDO:0022985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of rectum","termid":"MONDO:0021462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diffuse cavernous hemangioma of the rectum","synonyms":[{"name":"cavernous haemangioma of the rectum","type":"related"}],"termid":"MONDO:0022985","xrefs":{"Monarch":{"xref_id":"0022985"}}}


id: PBO:0066413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAD and GEM like GTPase 1","termid":"PBO:0066413"}


id: PBO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteome hyperlink","termid":"PBO:0001051"}


id: PBO:0085932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; completely overlaps the verified gene YJL077C/ICS3","termid":"PBO:0085932"}


id: PBO:0054894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2308","termid":"PBO:0054894"}


id: MONDO:0013573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the IFT43 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093","MONDO:0005497","MONDO:0005240"],"is_obsolete":false,"name":"cranioectodermal dysplasia 3","secondary_identifiers":["GARD:15757","OMIM:614099","UMLS:C3279807","DOID:0080805","MEDGEN:481437"],"synonyms":[{"name":"CED3","type":"related"},{"name":"CRANIOECTODERMAL dysplasia 3","type":"related"},{"name":"Cranioectodermal dysplasia type 3","type":"exact"},{"name":"IFT43 cranioectodermal dysplasia","type":"exact"},{"name":"cranioectodermal dysplasia 3","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in IFT43","type":"exact"}],"termid":"MONDO:0013573","xrefs":{"Monarch":{"xref_id":"0013573"}}}


id: PBO:0108943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 22","termid":"PBO:0108943"}


id: MONDO:0014187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the PRKG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 8","secondary_identifiers":["OMIM:615436","UMLS:C3809513","GARD:15966","MEDGEN:815843"],"synonyms":[{"name":"AAT8","type":"related"},{"name":"PRKG1 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 8","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 8","type":"exact"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in PRKG1","type":"exact"}],"termid":"MONDO:0014187","xrefs":{"Monarch":{"xref_id":"0014187"}}}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: FYPO:0003489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003489"}


id: FYPO:0003198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to osmotic stress. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered RNA level during cellular response to osmotic stress","synonyms":[{"name":"abnormal RNA level during cellular response to osmotic stress","type":"exact"},{"name":"altered RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"altered RNA level during osmotic stress","type":"exact"},{"name":"altered cellular RNA level during cellular response to osmotic stress","type":"exact"},{"name":"altered transcript level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0003198"}


id: MONDO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital muscular dystrophy with cerebellar involvement (obsolete MONDO:0018277)","secondary_identifiers":["Orphanet:370959"],"synonyms":[{"name":"CMD with cerebellar involvement","type":"exact"},{"name":"CMD-CRB","type":"exact"}],"termid":"MONDO:0018277","xrefs":{"Monarch":{"xref_id":"0018277"}}}


id: GO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion sodium and calcium ions in which influx of sodium ions to the cytosol drives the efflux of calcium ions from the cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:calcium exchange (obsolete GO:0030181)","synonyms":[{"name":"sodium:calcium exchange","type":"exact"}],"termid":"GO:0030181"}


id: PR:P78970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lag1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.09c","secondary_identifiers":["UniProtKB:P78970"],"synonyms":[{"name":"Spom972h-CERS1","type":"exact"},{"name":"longevity assurance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"longevity assurance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78970"}


id: PBO:0082305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082305"}


id: PBO:0056979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR29B2 and MIR29C host gene","termid":"PBO:0056979"}


id: GO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2 phase","termid":"GO:0051319"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051329"}],"interesting_parent_ids":["GO:0008150","GO:0051329"],"is_obsolete":false,"name":"mitotic G2 phase","synonyms":[{"name":"G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000085"}


id: MONDO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of a carcinomatous epithelial component and a sarcomatous mesenchymal component. Representative examples include malignant mixed mesodermal (Mullerian) tumor of the female reproductive system and carcinosarcoma of the salivary gland and the lung.","definition_xrefs":["NCIT:C3729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed neoplasm","secondary_identifiers":["UMLS:C0206625","MEDGEN:64618","DOID:154","ICDO:8940/3","EFO:1000356","MESH:D018198"],"synonyms":[{"name":"malignant mixed cancer","type":"exact"},{"name":"malignant mixed neoplasm","type":"exact"},{"name":"malignant mixed tumor","type":"exact"},{"name":"malignant mixed tumors","type":"related"},{"name":"malignant mixed tumour","type":"exact"},{"name":"malignant mixed tumours","type":"related"},{"name":"mixed cell type cancer","type":"broad"},{"name":"mixed neoplasm","type":"broad"},{"name":"mixed neoplasm, malignant","type":"exact"},{"name":"mixed tumor","type":"broad"},{"name":"mixed tumor, malignant","type":"exact"},{"name":"mixed tumor, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed tumor, malignant, NOS (morphologic abnormality)","type":"exact"},{"name":"mixed tumors, malignant","type":"related"},{"name":"mixed tumour","type":"broad"},{"name":"tumor, malignant mixed","type":"related"},{"name":"tumor, mixed, malignant","type":"exact"},{"name":"tumors, malignant mixed","type":"related"}],"termid":"MONDO:0005853","xrefs":{"Monarch":{"xref_id":"0005853"}}}


id: GO:0051728
data:
  {"annotated_genes":["SJAG_03048","SJAG_05288","SJAG_04332","SJAG_04813","SJAG_03486","SJAG_01401","SJAG_02404","SJAG_02723","SJAG_01311","SJAG_00145","SJAG_00457","SJAG_03371","SJAG_04682","SJAG_01956","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92224,97070],"is_not":false,"summary":null,"term":"GO:0051728"},{"annotations":[107941,111257,107776,108621,120414,104310,106396],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[120269,118508],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[96450,106882,111033,103569],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"}]},"cv_name":"biological_process","definition":"The process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:ai","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"cell cycle switching","termid":"GO:0060184"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01956":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042061"],"synonyms":[{"name":"cell cycle switching, mitosis to meiosis","type":"narrow"},{"name":"conversion to meiosis","type":"narrow"},{"name":"conversion to meiotic cell cycle","type":"exact"},{"name":"entry into meiosis","type":"narrow"},{"name":"entry into meiotic cell cycle","type":"exact"},{"name":"initiation of meiosis","type":"narrow"},{"name":"initiation of meiotic cell cycle","type":"exact"},{"name":"meiotic entry","type":"narrow"}],"termid":"GO:0051728","terms_by_termid":{"GO:0051728":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null}}


id: GO:0019542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"propionate biosynthetic process","synonyms":[{"name":"propionate anabolism","type":"exact"},{"name":"propionate biosynthesis","type":"exact"},{"name":"propionate formation","type":"exact"},{"name":"propionate synthesis","type":"exact"}],"termid":"GO:0019542"}


id: MONDO:0100423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly PTPN11 gene mutation. (Mutation of the protein tyrosine phosphatase, non-receptor type 11 gene. It is seen in cases of juvenile myelomonocytic leukemia.)","definition_xrefs":["NCIT:C82612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, PTPN11 gene mutation","synonyms":[{"name":"AML, BPTP3 Gene Mutation","type":"exact"},{"name":"AML, PTP-1D Gene Mutation","type":"exact"},{"name":"AML, PTP2C Gene Mutation","type":"exact"},{"name":"AML, PTPN11 gene mutation","type":"exact"},{"name":"AML, Protein Tyrosine Phosphatase Non-Receptor Type 11 Gene Mutation","type":"exact"},{"name":"AML, Protein Tyrosine Phosphatase, Non-Receptor Type 11 Gene Mutation","type":"exact"},{"name":"AML, SH-PTP2 Gene Mutation","type":"exact"},{"name":"AML, SHP-2 Gene Mutation","type":"exact"},{"name":"AML, SHP2 Gene Mutation","type":"exact"}],"termid":"MONDO:0100423","xrefs":{"Monarch":{"xref_id":"0100423"}}}


id: MONDO:0007706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cavernous hemangiomas of face-supraumbilical midline raphe syndrome","secondary_identifiers":["Orphanet:2124","MEDGEN:99171","OMIM:140850","SCTID:234140000","UMLS:C0472694","MESH:C538144"],"synonyms":[{"name":"hemangiomas cavernous of face supraumbilical midline raphe","type":"related"},{"name":"hemangiomas, cavernous, of face and supraumbilical MIDLINE raphe","type":"related"},{"name":"raphe, supraumbilical Midline, with cavernous Facial hemangiomas","type":"related"},{"name":"sternal nonunion with supraumbilical raphe","type":"related"},{"name":"supraumbilical midabdominal raphe and facial cavernous hemangiomas","type":"related"}],"termid":"MONDO:0007706","xrefs":{"Monarch":{"xref_id":"0007706"}}}


id: PBO:0053060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LASP1 neighbor","termid":"PBO:0053060"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: PBO:0011077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Rim20 (predicted)","termid":"PBO:0011077"}


id: GO:0071849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071849)","termid":"GO:0071849"}


id: PR:P87295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pep5-like zinc finger protein C16A10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.03c","synonyms":[{"name":"Spom972h-SPAC16A10.03c","type":"exact"}],"termid":"PR:P87295"}


id: GO:0106143
data:
  {"annotated_genes":["SJAG_04680","SJAG_04848"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59389,117736],"is_not":false,"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 7-methylguanine (at position 46 in certain tRNAs, such as tRNA(phe) and tRNA(met). In yeast, it is a heterotetramer of two subunits, Trm8 (catalytic) and Trm82 (WD repeat).","definition_xrefs":["PMID:18184583","GOC:vw","PMID:1738232","PMID:15811913","PMID:18164779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04680":null,"SJAG_04848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m7G46) methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Trm8-Trm82 complex","type":"exact"},{"name":"tRNA (m7G46) methyltransferase","type":"exact"},{"name":"tRNA m7G methylation complex","type":"exact"}],"termid":"GO:0106143","terms_by_termid":{"GO:0106143":null}}


id: MONDO:0011884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypotrichosis-osteolysis-periodontitis-palmoplantar keratoderma syndrome is an extremely rare ectodermal dysplasia syndrome characterized by hypotrichosis universalis with mild to severe scarring alopecia, acro-osteolysis, onychogryphosis, thin and tapered fingertips, periodontitis and caries leading to premature teeth loss, linear or reticular palmoplantar keratoderma and erythematous, scaling, psoriasis-like skin lesions on arms and legs. Lingua plicata and ventricular tachycardia have also been observed.","definition_xrefs":["Orphanet:307936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypotrichosis-osteolysis-periodontitis-palmoplantar keratoderma syndrome","secondary_identifiers":["MESH:C564357","SCTID:763658004","MEDGEN:375146","OMIM:607658","GARD:17384","UMLS:C1843285"],"synonyms":[{"name":"HOPP syndrome","type":"exact"},{"name":"Hopp syndrome","type":"related"},{"name":"hypotrichosis-osteolysis-periodontitis-palmoplantar hyperkeratosis syndrome","type":"exact"},{"name":"hypotrichosis-osteolysis-periodontitis-palmoplantar keratoderma syndrome","type":"exact"},{"name":"hypotrichosis-striate palmoplantar hyperkeratosis-acroosteolysis-periodontitis syndrome","type":"exact"},{"name":"hypotrichosis-striate palmoplantar keratoderma-acroosteolysis-periodontitis syndrome","type":"exact"}],"termid":"MONDO:0011884","xrefs":{"Monarch":{"xref_id":"0011884"}}}


id: FYPO:0002705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methionine. Cells stop growing (and may die) at a concentration of methionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to methionine","synonyms":[{"name":"hypersensitive to methionine","type":"exact"},{"name":"methionine inhibited","type":"exact"},{"name":"sensitive to methionine during mitotic cell cycle","type":"related"},{"name":"sensitive to methionine during vegetative growth","type":"exact"}],"termid":"FYPO:0002705"}


id: FYECO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which linolenic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ linolenic acid","termid":"FYECO:0000051"}


id: PBO:0076267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIM-type zinc finger 7 associated protein 1","termid":"PBO:0076267"}


id: _global:ecologically_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297)","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecologically_related_to","secondary_identifiers":["RO:0002321"],"termid":"_global:ecologically_related_to"}


id: MONDO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis of blepharophimosis robin type","termid":"MONDO:0022871","xrefs":{"Monarch":{"xref_id":"0022871"}}}


id: GO:0072442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether DNA replication is complete is received and converted into a molecular signal, contributing to a mitotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA replication checkpoint (obsolete GO:0072442)","synonyms":[{"name":"S-M checkpoint sensor mechanism","type":"related"},{"name":"S-M checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in S-M checkpoint","type":"related"},{"name":"mitotic DNA replication checkpoint sensor mechanism","type":"related"},{"name":"mitotic DNA replication checkpoint sensor process","type":"related"},{"name":"sensing involved in S-M checkpoint","type":"related"},{"name":"sensing involved in mitotic DNA replication checkpoint","type":"related"}],"termid":"GO:0072442"}


id: MONDO:0851102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery disease","secondary_identifiers":["DOID:60001"],"termid":"MONDO:0851102","xrefs":{"Monarch":{"xref_id":"0851102"}}}


id: PBO:0113515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB protein kinase-like family member; mitochondrial inner membrane protein that interacts with outer membrane proteins Por1p and Om14p to form a MICOS-independent mitochondrial contact site; role in mitochondrial organization; contributes to mitochondrial lipid homeostasis; controls the cellular distribution of coenzyme Q (CoQ); contains a potential mitochondrial targeting sequence and predicted transmembrane domain","termid":"PBO:0113515"}


id: MONDO:0021541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of retina","termid":"MONDO:0021453"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hemangioma of retina","secondary_identifiers":["UMLS:C0154051","ICD9:228.03","NCIT:C3634","SCTID:93470007","MEDGEN:102307"],"synonyms":[{"name":"angioma of retina","type":"exact"},{"name":"angioma of the retina","type":"exact"},{"name":"hemangioma of the retina","type":"exact"},{"name":"retina angioma","type":"exact"},{"name":"retina hemangioma","type":"exact"},{"name":"retinal angioma","type":"exact"},{"name":"retinal hemangioma","type":"exact"}],"termid":"MONDO:0021541","xrefs":{"Monarch":{"xref_id":"0021541"}}}


id: MONDO:0011385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease of a degenerative nature that affects the intervertebral disk.","definition_xrefs":["NCIT:C26983"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete bone deterioration disease (obsolete MONDO:0000834)","termid":"MONDO:0000834"},{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disk degenerative disorder","secondary_identifiers":["MESH:D055959","ICD9:722.6","OMIM:603932","MEDGEN:102357","DOID:90","SCTID:77547008","EFO:0004994","UMLS:C0158266"],"synonyms":[{"name":"IDD","type":"exact"},{"name":"cervical disc degenerative disease","type":"narrow"},{"name":"cervical disk degenerative disease","type":"narrow"},{"name":"degenerative disc disease","type":"exact"},{"name":"degenerative disk disease","type":"exact"},{"name":"degenerative disorder of intervertebral disc","type":"exact"},{"name":"degenerative disorder of intervertebral disk","type":"exact"},{"name":"intervertebral Disc Degeneration","type":"exact"},{"name":"intervertebral Disc degenerative disease","type":"exact"},{"name":"intervertebral Disc degenerative disorder","type":"exact"},{"name":"intervertebral disc degeneration","type":"exact"},{"name":"intervertebral disc disease","type":"exact"},{"name":"intervertebral disk degeneration","type":"exact"},{"name":"intervertebral disk degenerative disorder","type":"exact"},{"name":"intervertebral disk disease","type":"exact"},{"name":"lumbar disc degeneration","type":"narrow"},{"name":"lumbar disk degeneration","type":"narrow"},{"name":"vertebral Disc degenerative disease","type":"exact"},{"name":"vertebral Disc degenerative disorder","type":"exact"},{"name":"vertebral disc disease","type":"exact"},{"name":"vertebral disk disease","type":"exact"}],"termid":"MONDO:0011385","xrefs":{"Monarch":{"xref_id":"0011385"}}}


id: FYPO:0004336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitochondrion","synonyms":[{"name":"abnormal protein localisation to mitochondrion","type":"exact"},{"name":"abnormal protein localization to mitochondria","type":"exact"},{"name":"abnormal protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004336"}


id: PBO:0056135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 6","termid":"PBO:0056135"}


id: FYPO:0009073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on lysine nitrogen source","synonyms":[{"name":"decreased growth on lysine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on lysine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with lysine nitrogen source","type":"related"},{"name":"reduced cell growth on lysine nitrogen source","type":"related"},{"name":"slow cell growth on lysine nitrogen source","type":"narrow"}],"termid":"FYPO:0009073"}


id: PBO:0049485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 1","termid":"PBO:0049485"}


id: GO:0007524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult visceral muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral muscle development","termid":"GO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult visceral muscle development","termid":"GO:0007524"}


id: PBO:0031768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_fermentation","termid":"PBO:0031768"}


id: MOD:00786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (2)H deuterium atoms for (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium substituted residue","synonyms":[{"name":"D(H)Res","type":"exact"}],"termid":"MOD:00786"}


id: PBO:0028860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0028860"}


id: PBO:0079941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usherin","termid":"PBO:0079941"}


id: FYPO:0004519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a DNA-directed DNA polymerase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0005447","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA-directed DNA polymerase activity","synonyms":[{"name":"abnormal DNA polymerase activity","type":"broad"}],"termid":"FYPO:0004519"}


id: GO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the cytoplasm of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic viral factory","termid":"GO:0039714"}


id: GO:0030408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + glycine = (6S)-5,6,7,8-tetrahydrofolate + N-formimidoylglycine.","definition_xrefs":["RHEA:24288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"glycine formimidoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02729","MetaCyc:GLYCINE-FORMIMINOTRANSFERASE-RXN","EC:2.1.2.4"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:glycine N-formimidoyltransferase activity","type":"related"},{"name":"FIG formiminotransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglycine formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glycine formiminotransferase activity","type":"exact"}],"termid":"GO:0030408"}


id: PBO:0047964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(X)(p22.31) B","termid":"PBO:0047964"}


id: MONDO:0003890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma that arises from the urinary bladder urothelium.","definition_xrefs":["NCIT:C27885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"},{"relation_name":"is_a","term_name":"infiltrating urothelial carcinoma","termid":"MONDO:0040678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma","secondary_identifiers":["DOID:6477","UMLS:C1334281","MEDGEN:233582"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma","type":"exact"},{"name":"infiltrating transitional cell carcinoma of the urinary bladder","type":"exact"},{"name":"invasive bladder transitional cell carcinoma","type":"exact"},{"name":"invasive bladder urothelial carcinoma","type":"exact"},{"name":"invasive transitional cell carcinoma of the urinary bladder","type":"exact"}],"termid":"MONDO:0003890","xrefs":{"Monarch":{"xref_id":"0003890"}}}


id: GO:1901533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"negatively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"down regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"downregulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of hematopoietic progenitor cell differentiation","type":"related"},{"name":"inhibition of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901533"}


id: GO:1903202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:TermGenie","PMID:24252804","GO_REF:0000058","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oxidative stress-induced cell death (obsolete GO:1903202)","synonyms":[{"name":"down regulation of cell death in response to oxidative stress","type":"exact"},{"name":"down-regulation of cell death in response to oxidative stress","type":"exact"},{"name":"downregulation of cell death in response to oxidative stress","type":"exact"},{"name":"inhibition of cell death in response to oxidative stress","type":"narrow"},{"name":"negative regulation of cell death in response to oxidative stress","type":"exact"},{"name":"protection against oxidative stress-induced cell death","type":"related"}],"termid":"GO:1903202"}


id: GO:0052403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont catalytic activity (obsolete GO:0052403)","synonyms":[{"name":"down regulation by host of symbiont enzyme activity","type":"exact"},{"name":"down regulation by host of symbiont protein function","type":"broad"},{"name":"down-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"down-regulation by host of symbiont protein function","type":"broad"},{"name":"downregulation by host of symbiont enzyme activity","type":"exact"},{"name":"downregulation by host of symbiont protein function","type":"broad"},{"name":"inhibition by host of symbiont enzyme activity","type":"narrow"},{"name":"inhibition by host of symbiont protein function","type":"narrow"},{"name":"inhibition of symbiont enzyme activity","type":"exact"},{"name":"inhibition of symbiont protein function","type":"broad"},{"name":"negative regulation by host of symbiont enzyme activity","type":"exact"},{"name":"negative regulation by host of symbiont molecular function","type":"broad"}],"termid":"GO:0052403"}


id: MONDO:0859527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 88","secondary_identifiers":["OMIM:620283","MEDGEN:1840991","UMLS:C5830355"],"termid":"MONDO:0859527","xrefs":{"Monarch":{"xref_id":"0859527"}}}


id: SO:1000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000126 sequence_variant_affecting_transcript_secondary_structure (obsolete SO:1000126)","synonyms":[{"name":"mutation affecting transcript secondary structure","type":"related"},{"name":"sequence variant affecting transcript secondary structure","type":"exact"}],"termid":"SO:1000126"}


id: GO:1990443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own threonine amino acid residues, or a threonine residue on an identical protein.","definition_xrefs":["PMID:7803855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine autophosphorylation","termid":"GO:1990443"}


id: GO:1905303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:pad","PMID:18691641","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pinocytosis","termid":"GO:0048549"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"positively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of macropinocytosis","synonyms":[{"name":"activation of macropinocytosis","type":"narrow"},{"name":"up regulation of macropinocytosis","type":"exact"},{"name":"up-regulation of macropinocytosis","type":"exact"},{"name":"upregulation of macropinocytosis","type":"exact"}],"termid":"GO:1905303"}


id: MONDO:0016132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary disease with peripheral neuropathy (obsolete MONDO:0016132)","secondary_identifiers":["Orphanet:207015"],"termid":"MONDO:0016132","xrefs":{"Monarch":{"xref_id":"0016132"}}}


id: MONDO:0011923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteoarthritis in which the cause of the disease is a mutation in the ASPN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 3","secondary_identifiers":["OMIM:607850","MEDGEN:382650","UMLS:C2675609"],"synonyms":[{"name":"ASPN osteoarthritis","type":"exact"},{"name":"OS3","type":"related"},{"name":"osteoarthritis caused by mutation in ASPN","type":"exact"},{"name":"osteoarthritis of knee/hip","type":"related"},{"name":"osteoarthritis susceptibility 3","type":"exact"},{"name":"osteoarthritis susceptibility type 3","type":"exact"}],"termid":"MONDO:0011923","xrefs":{"Monarch":{"xref_id":"0011923"}}}


id: GO:0001147
data:
  {"annotated_genes":["SJAG_02242","SJAG_04855","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76078,76166,104232],"is_not":false,"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["PMID:18391175","PMID:18280161","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"transcription termination site sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001145","GO:0001160","GO:0001146","GO:0001148"],"synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding","type":"narrow"},{"name":"transcription termination site DNA binding","type":"related"}],"termid":"GO:0001147","terms_by_termid":{"GO:0001147":null}}


id: PBO:0004550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv2","termid":"PBO:0004550"}


id: PBO:0060043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 31","termid":"PBO:0060043"}


id: FYPO:0006621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deacetylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type) when the cell is returned to glucose-rich medium following glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal H3-K4 deacetylation during recovery from glucose starvation","synonyms":[{"name":"normal H3-K4 deacetylation during recovery from glucose depletion","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose deprivation","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose limitation","type":"related"},{"name":"normal H3-K4 deacetylation following glucose starvation","type":"exact"},{"name":"normal H3K4 deacetylation during recovery from glucose starvation","type":"exact"}],"termid":"FYPO:0006621"}


id: PBO:0089286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase Hem15","termid":"PBO:0089286"}


id: PBO:0026801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026801"}


id: GO:0032419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of an lysosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of lysosome membrane (obsolete GO:0032419)","synonyms":[{"name":"extrinsic to lysosomal membrane","type":"exact"},{"name":"extrinsic to lysosome membrane","type":"exact"}],"termid":"GO:0032419"}


id: GO:0034241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage fusion","termid":"GO:0034239"},{"relation_name":"is_a","term_name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"},{"relation_name":"positively_regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage fusion","termid":"GO:0034241"}


id: PR:Q9P373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine protease ATG4A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine protease atg4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.08","secondary_identifiers":["UniProtKB:Q9P373"],"synonyms":[{"name":"SPAC19B12.08","type":"related"},{"name":"Spom972h-ATG4A","type":"exact"},{"name":"autophagy-related protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P373"}


id: GO:0046077
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dUDP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dUDP metabolism","type":"exact"}],"termid":"GO:0046077","terms_by_termid":{"GO:0006227":null}}


id: PBO:0063221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 1","termid":"PBO:0063221"}


id: GO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of deprivation of water.","definition_xrefs":["PMID:9797333","GOC:jp","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose metabolism in response to water deprivation (obsolete GO:0070416)","synonyms":[{"name":"trehalose metabolic process involved in response to water deprivation","type":"exact"}],"termid":"GO:0070416"}


id: PBO:0038801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 7","termid":"PBO:0038801"}


id: GO:0071659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of IP-10 production","termid":"GO:0071658"},{"relation_name":"negatively_regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of IP-10 production","synonyms":[{"name":"negative regulation of CXCL10 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071659"}


id: PBO:0003887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase 1 protein Trt1","termid":"PBO:0003887"}


id: PBO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal disorders","termid":"PBO:0004990"}


id: PBO:0053547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 554","termid":"PBO:0053547"}


id: GO:1901266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cephalosporin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cephalosporin metabolic process","termid":"GO:0043645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephalosporin C metabolic process","synonyms":[{"name":"cephalosporin C metabolism","type":"exact"}],"termid":"GO:1901266"}


id: PBO:0078106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 13","termid":"PBO:0078106"}


id: MONDO:0014328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Dravet syndrome","termid":"MONDO:0100135"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 19","secondary_identifiers":["DOID:0080431","NCIT:C142802","UMLS:C3810400","MEDGEN:816730","GARD:16008","OMIM:615744"],"synonyms":[{"name":"DEE19","type":"exact"},{"name":"EIEE19","type":"exact"},{"name":"Early Infantile epileptic encephalopathy 19","type":"exact"},{"name":"GABRA1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 19","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRA1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 19","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 19","type":"exact"}],"termid":"MONDO:0014328","xrefs":{"Monarch":{"xref_id":"0014328"}}}


id: PBO:0082420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and 1-acyl DHAP reductase; NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase involved in phosphatidic acid biosynthesis; lipid droplet triacylglycerol lipase involved in mobilization of non-polar lipids; found in lipid particles, endoplasmic reticulum and mitochondrial outer membrane; forms NADPH-regulated channel in mitochondrial outer membrane; required for spore germination; role in cell wall biosynthesis; capable of metabolizing steroid hormones","termid":"PBO:0082420"}


id: SO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_methylation_site","synonyms":[{"name":"H3K79 methylation site","type":"exact"}],"termid":"SO:0001735"}


id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0000641"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: FYPO:0005627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to ultraviolet (UV) light, when cells are exposed to UV during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0003445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"delayed DNA damage checkpoint deactivation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint after UV irradiation during S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"prolonged DNA damage checkpoint during cellular response to UV during mitotic S phase","type":"exact"}],"termid":"FYPO:0005627"}


id: GO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A constituent of the extracellular matrix that enables the matrix to resist compressive forces; often a proteoglycan.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix structural constituent conferring compression resistance","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030021"}


id: MOD:00115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-palmitoyl-L-cysteine.","definition_xrefs":["Unimod:47#C","PubMed:8824274","DeltaMass:303","PubMed:1872406","PubMed:8180229","PubMed:3166978","RESID:AA0106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-palmitoylated residue","termid":"MOD:00653"},{"relation_name":"is_a","term_name":"palmitoylated-L-cysteine","termid":"MOD:01684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-palmitoyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(hexadecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(hexadecanoylthio)propanoic acid","type":"exact"},{"name":"ACT_SITE S-palmitoyl cysteine intermediate","type":"exact"},{"name":"LIPID S-palmitoyl cysteine","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"S-hexadecanoylated L-cysteine","type":"exact"},{"name":"S-palmitoyl-L-cysteine","type":"exact"},{"name":"S-palmitoylated L-cysteine","type":"exact"},{"name":"S-palmityl Cystenyl","type":"exact"},{"name":"SPamCys","type":"exact"},{"name":"cysteine hexadecanoate thioester","type":"exact"},{"name":"cysteine palmitate thioester","type":"exact"}],"termid":"MOD:00115"}


id: MONDO:1012957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar ataxia that occurs in dogs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration, dog","termid":"MONDO:1011016"},{"relation_name":"is_a","term_name":"cerebellar ataxia, non-human animal","termid":"MONDO:1012956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, dog","termid":"MONDO:1012957","xrefs":{"Monarch":{"xref_id":"1012957"}}}


id: PBO:0041030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor pseudogene 1","termid":"PBO:0041030"}


id: GO:0140133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts cytokine production in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23083102"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host cytokine production (obsolete GO:0140133)","synonyms":[{"name":"negative regulation by symbiont of host cytokine production","type":"exact"},{"name":"suppression by symbiont of host cytokine production","type":"exact"},{"name":"suppression by symbiont of host cytokine secretion","type":"related"}],"termid":"GO:0140133"}


id: MONDO:0018889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of beta-myosin heavy chain (MYH7)","termid":"MONDO:0016195"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"hyaline body myopathy","secondary_identifiers":["DOID:0111267","icd11.foundation:352828432","Orphanet:53698","GARD:7148"],"synonyms":[{"name":"myosin storage myopathy","type":"exact"}],"termid":"MONDO:0018889","xrefs":{"Monarch":{"xref_id":"0018889"}}}


id: PBO:0040732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor like 1","termid":"PBO:0040732"}


id: PBO:0077243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 4","termid":"PBO:0077243"}


id: PBO:0068470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 47, pseudogene","termid":"PBO:0068470"}


id: FYPO:0008291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA present in the cell is higher than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular mtDNA level","synonyms":[{"name":"increased mitochondrial DNA content","type":"exact"},{"name":"increased mitochondrial DNA copy number","type":"related"},{"name":"increased mitochondrial genome copy number","type":"related"},{"name":"increased mtDNA level","type":"exact"}],"termid":"FYPO:0008291"}


id: PBO:0088093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase; catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), which is important in cell wall biosynthesis, protein N-glycosylation, and GPI anchor biosynthesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0088093"}


id: GO:0060862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of floral organ abscission","termid":"GO:0060862"}


id: GO:0009308
data:
  {"annotated_genes":["SJAG_03632","SJAG_04546","SJAG_05007","SJAG_03167","SJAG_04904","SJAG_04130","SJAG_00043","SJAG_03288","SJAG_04481","SJAG_01455","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70062,79014,75218,75946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[113175],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0170066"},{"annotations":[102709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006595"},{"annotations":[77525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[89268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"},{"annotations":[76765,79634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[72596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008216"},{"annotations":[104704,79633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03288":null,"SJAG_03632":null,"SJAG_04130":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_04904":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044106"],"synonyms":[{"name":"amine metabolism","type":"exact"},{"name":"cellular amine metabolic process","type":"exact"}],"termid":"GO:0009308","terms_by_termid":{"GO:0000162":null,"GO:0006595":null,"GO:0006597":null,"GO:0008216":null,"GO:0008295":null,"GO:0009447":null,"GO:0033387":null,"GO:0170066":null}}


id: GO:0004174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H+ + oxidized [electron-transfer flavoprotein].","definition_xrefs":["RHEA:24052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","termid":"GO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"electron-transferring-flavoprotein dehydrogenase activity","secondary_identifiers":["EC:1.5.5.1","MetaCyc:RXN66-550","Reactome:R-HSA-169270"],"synonyms":[{"name":"ETF dehydrogenase activity","type":"related"},{"name":"ETF-QO activity","type":"related"},{"name":"ETF-ubiquinone oxidoreductase activity","type":"related"},{"name":"ETF:ubiquinone oxidoreductase activity","type":"related"},{"name":"electron transfer flavoprotein Q oxidoreductase activity","type":"related"},{"name":"electron transfer flavoprotein dehydrogenase activity","type":"related"},{"name":"electron transfer flavoprotein reductase activity","type":"related"},{"name":"electron transfer flavoprotein-ubiquinone oxidoreductase activity","type":"related"},{"name":"electron-transferring-flavoprotein:ubiquinone oxidoreductase activity","type":"related"}],"termid":"GO:0004174"}


id: PBO:0056675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A","termid":"PBO:0056675"}


id: FYPO:0002710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which nuclei formed by the second meiotic nuclear division do not contain detectable spindle pole bodies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body absent from cell","termid":"FYPO:0002709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spindle pole body absent from cell after meiosis II","synonyms":[{"name":"SPB absent from cell after meiosis II","type":"exact"},{"name":"absent spindle pole body after meiosis II","type":"exact"},{"name":"absent spindle pole body after second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002710"}


id: MOD:00972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monobrominated L-phenylalanine, such as L-2'-bromophenylalanine.","definition_xrefs":["Unimod:340#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated L-phenylalanine","synonyms":[{"name":"Br1Phe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"bromination","type":"related"}],"termid":"MOD:00972"}


id: PBO:0066303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 5","termid":"PBO:0066303"}


id: MOD:01529
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01529"}


id: GO:1904016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroglobulin triiodothyronine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:7531505","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Thyroglobulin triiodothyronine","termid":"GO:1904016"}


id: MONDO:1011117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, sheep","secondary_identifiers":["OMIA:000243-9940"],"termid":"MONDO:1011117","xrefs":{"Monarch":{"xref_id":"1011117"}}}


id: GO:0004378
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61356],"is_not":false,"summary":null,"term":"GO:0004378"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP-alpha-D-mannose = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP + H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->3)-D-mannosyl-D-mannose linkage.","definition_xrefs":["EC:2.4.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,3-mannosyltransferase activity","termid":"GO:0000033"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-5462","RHEA:29515"],"synonyms":[{"name":"GDP-D-mannose:D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol 3-alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase II","type":"related"},{"name":"GDP-mannose:glycolipid 1,3-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 3-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid II mannosyltransferase activity","type":"related"},{"name":"mannosyltransferase II activity","type":"related"}],"termid":"GO:0004378","terms_by_termid":{"GO:0004378":null}}


id: GO:0032455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of a mature nerve growth factor (NGF) by proteolysis of a precursor.","definition_xrefs":["GOC:mah","PMID:8615794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"nerve growth factor processing","secondary_identifiers":["Reactome:R-HSA-167060"],"synonyms":[{"name":"NGF processing","type":"exact"},{"name":"beta-nerve growth factor processing","type":"exact"}],"termid":"GO:0032455"}


id: MONDO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 84","secondary_identifiers":["UMLS:C5394081","OMIM:618792","DOID:0112219","MEDGEN:1720141","NORD:102487"],"synonyms":[{"name":"DEE84","type":"exact"},{"name":"EIEE84","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 84","type":"exact"},{"name":"Jamuar Syndrome","type":"related"},{"name":"UGDH-Related Disorder","type":"exact"},{"name":"developmental and epileptic encephalopathy 84","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 84","type":"exact"}],"termid":"MONDO:0032918","xrefs":{"Monarch":{"xref_id":"0032918"}}}


id: SO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Common Type: A motif of six consecutive residues that contains two H-bonds in which: the main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+5) the main-chain CO of residue(i+1) is H-bonded to the main-chain NH of residue(i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schellmann_loop","termid":"SO:0001123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop_six","secondary_identifiers":["BS:00227"],"synonyms":[{"name":"schellmann loop six","type":"exact"},{"name":"six-residue schellmann loop","type":"exact"}],"termid":"SO:0001125"}


id: PATO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark orange","termid":"PATO:0001256"}


id: PBO:0057239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 429","termid":"PBO:0057239"}


id: PBO:0056923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis regulator for oocyte development","termid":"PBO:0056923"}


id: PBO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 35","termid":"PBO:0050218"}


id: PBO:0056961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 22","termid":"PBO:0056961"}


id: PBO:0052162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 10","termid":"PBO:0052162"}


id: GO:0032707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-23 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-23 production","termid":"GO:0032667"},{"relation_name":"negatively_regulates","term_name":"interleukin-23 production","termid":"GO:0032627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-23 production","secondary_identifiers":["GO:0045397"],"synonyms":[{"name":"down regulation of interleukin-23 production","type":"exact"},{"name":"down-regulation of interleukin-23 production","type":"exact"},{"name":"downregulation of interleukin-23 production","type":"exact"},{"name":"inhibition of interleukin-23 production","type":"narrow"},{"name":"negative regulation of IL-23 production","type":"exact"},{"name":"negative regulation of interleukin-23 biosynthetic process","type":"narrow"}],"termid":"GO:0032707"}


id: PBO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein","termid":"PBO:0000229"}


id: PBO:0079075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-3","termid":"PBO:0079075"}


id: PBO:0060018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 6","termid":"PBO:0060018"}


id: MONDO:0007783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any malignant hyperthermia of anesthesia in which the cause of the disease is a mutation in the RYR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant hyperthermia of anesthesia","termid":"MONDO:0018493"},{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 1","secondary_identifiers":["OMIM:145600","UMLS:C2930980","MEDGEN:443948","MESH:C535694","DOID:0080990"],"synonyms":[{"name":"King syndrome","type":"related"},{"name":"King-Denborough syndrome","type":"related"},{"name":"King-Denborough syndrome, included","type":"related"},{"name":"MHS","type":"related"},{"name":"MHS1","type":"related"},{"name":"RYR1 malignant hyperthermia of anaesthesia","type":"exact"},{"name":"RYR1 malignant hyperthermia of anesthesia","type":"exact"},{"name":"hyperpyrexia, malignant","type":"related"},{"name":"hyperpyrexia, malignant;MH KING syndrome, included","type":"related"},{"name":"hyperthermia of anaesthesia","type":"related"},{"name":"hyperthermia of anesthesia","type":"related"},{"name":"malignant hyperthermia of anaesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia of anesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia susceptibility 1","type":"exact"},{"name":"malignant hyperthermia susceptibility type 1","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 1","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to malignant hyperthermia 1","type":"related"}],"termid":"MONDO:0007783","xrefs":{"Monarch":{"xref_id":"0007783"}}}


id: PBO:0052040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunD proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052040"}


id: MONDO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:C6528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericytic neoplasm","secondary_identifiers":["MEDGEN:235473","UMLS:C1335392","DOID:3316"],"synonyms":[{"name":"Pericytic neoplasm","type":"exact"},{"name":"Pericytic tumor","type":"exact"},{"name":"Pericytic tumour","type":"exact"},{"name":"malignant perivascular cancer","type":"narrow"},{"name":"perivascular neoplasm","type":"exact"},{"name":"perivascular tumor","type":"exact"},{"name":"perivascular tumour","type":"exact"}],"termid":"MONDO:0002604","xrefs":{"Monarch":{"xref_id":"0002604"}}}


id: PBO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor like","termid":"PBO:0060380"}


id: MONDO:0021240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the tongue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tongue neoplasm","secondary_identifiers":["MEDGEN:52778","UMLS:C0040411","EFO:0003871","SCTID:126778001","NCIT:C3416"],"synonyms":[{"name":"neoplasm of the tongue","type":"exact"},{"name":"neoplasm of tongue","type":"exact"},{"name":"tongue neoplasm (disease)","type":"exact"},{"name":"tongue tumor","type":"exact"},{"name":"tongue tumour","type":"exact"},{"name":"tumor of the tongue","type":"exact"},{"name":"tumor of tongue","type":"exact"},{"name":"tumour of the tongue","type":"exact"},{"name":"tumour of tongue","type":"exact"}],"termid":"MONDO:0021240","xrefs":{"Monarch":{"xref_id":"0021240"}}}


id: GO:0047182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + 1-O-trans-cinnamoyl-beta-D-glucopyranose = beta-D-glucose + alkyl cinnamate.","definition_xrefs":["MetaCyc:2.3.1.152-RXN","EC:2.3.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"alcohol O-cinnamoyltransferase activity","secondary_identifiers":["RHEA:23524"],"synonyms":[{"name":"1-O-trans-cinnamoyl-beta-D-glucopyranose:alcohol O-cinnamoyltransferase activity","type":"related"}],"termid":"GO:0047182"}


id: GO:1904349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small intestine smooth muscle contraction.","definition_xrefs":["PMID:11991626","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"is_a","term_name":"regulation of small intestine smooth muscle contraction","termid":"GO:1904347"},{"relation_name":"positively_regulates","term_name":"small intestine smooth muscle contraction","termid":"GO:1990770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestine smooth muscle contraction","synonyms":[{"name":"activation of small intestine smooth muscle contraction","type":"narrow"},{"name":"up regulation of small intestine smooth muscle contraction","type":"exact"},{"name":"up-regulation of small intestine smooth muscle contraction","type":"exact"},{"name":"upregulation of small intestine smooth muscle contraction","type":"exact"}],"termid":"GO:1904349"}


id: PBO:0116430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone, Atp10","termid":"PBO:0116430"}


id: PBO:0004078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1/Prk1 family protein kinase Ppk29","termid":"PBO:0004078"}


id: GO:0030291
data:
  {"annotated_genes":["SJAG_01245","SJAG_03931","SJAG_01210","SJAG_03974"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110391,120077],"is_not":false,"summary":null,"term":"GO:0030291"},{"annotations":[72734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[110884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein serine/threonine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase inhibitor activity","termid":"GO:0004860"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01245":null,"SJAG_03931":null,"SJAG_03974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"protein serine/threonine kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030291","terms_by_termid":{"GO:0004861":null,"GO:0004862":null,"GO:0030291":null}}


id: PATO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acceleration","termid":"PATO:0001028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular acceleration","termid":"PATO:0001350"}


id: SO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 25S rRNA is an RNA component of the large subunit of cytosolic ribosomes most eukaryotes.","definition_xrefs":["PMID:15493135","RSC:cb","PMID:2100998"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_25S_gene","termid":"SO:0002242"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_25S_rRNA","synonyms":[{"name":"cytosolic 25S LSU rRNA","type":"exact"},{"name":"cytosolic 25S rRNA","type":"exact"},{"name":"cytosolic 25S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 25S","type":"exact"}],"termid":"SO:0001002"}


id: FYPO:0006052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PomBase:mah","PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"normal lipid droplet localization to FSM leading edge","type":"exact"},{"name":"normal lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"normal lipid particle localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006052"}


id: GO:0160216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-lactoyl-L-lysyl-[protein] = (S)-lactate + L-lysyl-[protein].","definition_xrefs":["PMID:35044827","RHEA:81387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein lysine delactylase activity","termid":"GO:0160216"}


id: GO:0043264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle","termid":"GO:0043228"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular membraneless organelle","synonyms":[{"name":"extracellular non-membrane-bounded organelle","type":"exact"},{"name":"extracellular non-membrane-enclosed organelle","type":"exact"}],"termid":"GO:0043264"}


id: PBO:0056538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylmalonyl-CoA epimerase","termid":"PBO:0056538"}


id: PBO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXS family protein","termid":"PBO:0000405"}


id: GO:0034236
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72732],"is_not":false,"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to one or both of the catalytic subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"},{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein kinase A catalytic subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PKA catalytic subunit binding","type":"exact"}],"termid":"GO:0034236","terms_by_termid":{"GO:0034236":null}}


id: GO:0090646
data:
  {"annotated_genes":["SJAG_00997","SJAG_00255","SJAG_04885","SJAG_00358","SJAG_04700","SJAG_00865","SJAG_00186","SJAG_02288","SJAG_01704","SJAG_02302","SJAG_04367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89602,82197,71823,119955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[79882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[120667,77249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[96161,108854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[78000,94689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group, in the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial tRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6785470"],"termid":"GO:0090646","terms_by_termid":{"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:1990180":null,"GO:1990799":null}}


id: PR:O43042
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.14c","synonyms":[{"name":"Spom972h-mrpl3","type":"exact"}],"termid":"PR:O43042"}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: GO:0140841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine.","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-acetylglucosaminyltransferase activity","termid":"GO:0097363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}


id: GO:0070972
data:
  {"annotated_genes":["SJAG_01282","SJAG_01759","SJAG_02588","SJAG_03315","SJAG_04129","SJAG_00064","SJAG_03411","SJAG_00959","SJAG_01001","SJAG_02456","SJAG_02208","SJAG_01782","SJAG_00603","SJAG_03737","SJAG_03396","SJAG_02867","SJAG_00360","SJAG_03244","SJAG_01840","SJAG_00175","SJAG_02354","SJAG_01750","SJAG_03955","SJAG_03684","SJAG_02330","SJAG_01496","SJAG_00284","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111618,81300,97647,111329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[74929,82042,110292,99973,99256],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[79980,72728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070973"},{"annotations":[94025],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006621"},{"annotations":[71373,70803,100286,100336,114569,89514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[67580,70548,96175,111619,74733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[116388,93524,117151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[77331,75390,74981,99975,104531,110294],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00284":null,"SJAG_00360":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01001":null,"SJAG_01282":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_02867":null,"SJAG_03244":null,"SJAG_03315":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03955":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in endoplasmic reticulum","type":"exact"},{"name":"protein localization in ER","type":"exact"},{"name":"protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:0070972","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006621":null,"GO:0031204":null,"GO:0045047":null,"GO:0070973":null}}


id: PBO:0081052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 10","termid":"PBO:0081052"}


id: MONDO:1010952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Embryonal rhabdomyosarcoma that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma, non-human animal","termid":"MONDO:1010216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal rhabdomyosarcoma, cattle","secondary_identifiers":["OMIA:001921-9913"],"termid":"MONDO:1010952","xrefs":{"Monarch":{"xref_id":"1010952"}}}


id: GO:0070721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a Stat1-Stat2 heterodimer and the IRF9 protein.","definition_xrefs":["PMID:8943351","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ISGF3 complex","synonyms":[{"name":"interferon-stimulated gene factor 3 transcription complex","type":"exact"}],"termid":"GO:0070721"}


id: GO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD+ = 2,3-dihydroxy-p-cumate + H+ + NADH.","definition_xrefs":["EC:1.3.1.58","RHEA:23772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-665","KEGG_REACTION:R05240","UM-BBD_reactionID:r0396"],"synonyms":[{"name":"cis-2,3-dihydroxy-2,3-dihydro-p-cumate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018511"}


id: PBO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine hydroxymethyltransferase (predicted)","termid":"PBO:0001867"}


id: PBO:0089518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, minus-end directed microtubule motor Dhc1","termid":"PBO:0089518"}


id: GO:0075074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont spore digests parts of its own cytoplasm, occurring when the appressorium forms on or near the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spore autophagy involved in appressorium formation on or near host (obsolete GO:0075074)","synonyms":[{"name":"autophagy of spores during appressorium formation on or near host","type":"exact"},{"name":"spore autophagy during appressorium formation on or near host","type":"related"}],"termid":"GO:0075074"}


id: GO:0032301
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71580,74378],"is_not":false,"summary":null,"term":"GO:0032301"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6.","definition_xrefs":["PMID:11005803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MutSalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MMR complex","type":"broad"},{"name":"MSH2/MSH6 complex","type":"exact"}],"termid":"GO:0032301","terms_by_termid":{"GO:0032301":null}}


id: PBO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nucleotide exchange factor synembryn family","termid":"PBO:0012285"}


id: PBO:0091168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa","termid":"PBO:0091168"}


id: PBO:0085603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p; required for multiple vacuolar sorting pathways; human homolog VTI1A can complement yeast null mutant","termid":"PBO:0085603"}


id: GO:0043235
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"receptor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0043235","terms_by_termid":{"GO:0038038":null}}


id: PBO:0086031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, abundance changes with carbon source","termid":"PBO:0086031"}


id: GO:0010772
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109637,112295],"is_not":false,"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0065003","GO:0044085","GO:0140013","GO:0008150","GO:0006281","GO:0006310"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010772","terms_by_termid":{"GO:0010772":null}}


id: GO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of strand invasion","termid":"GO:0060542"}


id: PBO:0047439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 10","termid":"PBO:0047439"}


id: PR:Q9Y800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug97 gene.","definition_xrefs":["UniProtKB:Q9Y800","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 97 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.11c","synonyms":[{"name":"Spom972h-mug97","type":"exact"},{"name":"meiotic expression up-regulated protein 33 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y800"}


id: PBO:0029619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029619"}


id: MONDO:0020766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuropathy, congenital hypomelinating","termid":"MONDO:0033352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002320"],"is_obsolete":false,"name":"neuropathy, congenital hypomyelinating, 3","secondary_identifiers":["UMLS:C4748608","MEDGEN:1648417","OMIM:618186","GARD:18567"],"synonyms":[{"name":"CHN3","type":"exact"},{"name":"NEUROPATHY, CONGENITAL HYPOMYELINATING, 3","type":"exact"},{"name":"hypomyelinating neuropathy, congenital, 3","type":"exact"}],"termid":"MONDO:0020766","xrefs":{"Monarch":{"xref_id":"0020766"}}}


id: PBO:0065909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB GTPase activating protein 1","termid":"PBO:0065909"}


id: MONDO:0021280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland mucoepidermoid carcinoma","termid":"MONDO:0006286"},{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"mucoepidermoid carcinoma of parotid gland","secondary_identifiers":["icd11.foundation:135568040","MEDGEN:277506","UMLS:C1335363","NCIT:C5938","SCTID:423793008"],"synonyms":[{"name":"mucoepidermoid carcinoma of parotid","type":"exact"},{"name":"mucoepidermoid carcinoma of the parotid","type":"exact"},{"name":"mucoepidermoid carcinoma of the parotid gland","type":"exact"},{"name":"parotid gland mucoepidermoid carcinoma","type":"exact"},{"name":"parotid mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0021280","xrefs":{"Monarch":{"xref_id":"0021280"}}}


id: PR:Q09784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs33 gene.","definition_xrefs":["UniProtKB:Q09784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.05c","synonyms":[{"name":"Spom972h-trs33","type":"exact"}],"termid":"PR:Q09784"}


id: PBO:0065361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 2","termid":"PBO:0065361"}


id: FYPO:0002375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0002375)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002375"}


id: GO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP catabolic process (obsolete GO:0006200)","secondary_identifiers":["Wikipedia:ATP_hydrolysis"],"synonyms":[{"name":"ATP breakdown","type":"exact"},{"name":"ATP catabolism","type":"exact"},{"name":"ATP degradation","type":"exact"},{"name":"ATP hydrolysis","type":"narrow"}],"termid":"GO:0006200"}


id: PBO:0039382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase","termid":"PBO:0039382"}


id: PBO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 antisense RNA 1","termid":"PBO:0045804"}


id: GO:1903954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:25281747","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (obsolete GO:1903954)","synonyms":[{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"narrow"},{"name":"positive regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:1903954"}


id: PBO:0066988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 291","termid":"PBO:0066988"}


id: GO:0008772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-[isocitrate dehydrogenase] = ADP + H+ + O-phospho-L-seryl-[isocitrate dehydrogenase].","definition_xrefs":["RHEA:43540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine kinase activity","termid":"GO:0106310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0003674","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"[isocitrate dehydrogenase (NADP+)] kinase activity","secondary_identifiers":["MetaCyc:PHOSICITDEHASE-RXN","EC:2.7.11.5"],"synonyms":[{"name":"ATP:isocitrate dehydrogenase (NADP+) phosphotransferase activity","type":"related"},{"name":"ICDH kinase/phosphatase activity","type":"broad"},{"name":"IDH kinase activity","type":"related"},{"name":"IDH kinase/phosphatase activity","type":"broad"},{"name":"IDH-K/P","type":"related"},{"name":"IDHK/P","type":"broad"},{"name":"isocitrate dehydrogenase (NADP) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase (NADP+) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase (phosphorylating) activity","type":"related"},{"name":"isocitrate dehydrogenase kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase/phosphatase activity","type":"broad"}],"termid":"GO:0008772"}


id: GO:1905540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-7 (IL-7) and that consists of, at a minimum, an interleukin, an alpha and a gamma chain as well as optional additional kinase subunits. The alpha chain binds IL-7 with high affinity and subsequently binds the cytokine receptor common gamma chain that forms part of multiple interleukin receptors.","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","PMID:19141282","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-7 receptor complex","synonyms":[{"name":"IL-7 receptor complex","type":"exact"},{"name":"IL-7-receptor complex","type":"exact"},{"name":"IL7 receptor complex","type":"exact"},{"name":"IL7-receptor complex","type":"exact"}],"termid":"GO:1905540"}


id: MOD:00931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other - BHTOH is formed upon metabolism of BHT with P450 enzymes. The BHTOH is further metabolized to its quinone methide (electrophile) which reacts with -SH and -NH2 groups","definition_xrefs":["Unimod:498","PubMed:11085420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michael addition of t-butyl hydroxylated BHT (BHTOH) to C, H or K","synonyms":[{"name":"BHTOH","type":"related"},{"name":"Michael addition of t-butyl hydroxylated BHT (BHTOH) to C, H or K","type":"related"}],"termid":"MOD:00931"}


id: PBO:0114491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane flippase required for the translocation of Man5GlcNac2-PP-Dol; catalyzes the translocation of the lipid-linked oligosaccharide Man5GlcNac2-PP-Dol across the ER lipid bilayer from the cytoplasmic face to the lumen; mutation is suppressed by expression of human p53 protein; human ortholog RFT1 complements the yeast null mutant","termid":"PBO:0114491"}


id: FYPO:0000797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tert-butyl hydroperoxide (TBHP or t-BOOH). Cells stop growing (and may die) at a concentration of tert-butyl hydroperoxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tert-butyl hydroperoxide","synonyms":[{"name":"hypersensitive to tert-butyl hydroperoxide","type":"exact"},{"name":"sensitive to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"sensitive to TBHP","type":"exact"},{"name":"sensitive to t-BOOH","type":"exact"},{"name":"sensitive to tert-butyl hydroperoxide during mitotic cell cycle","type":"related"},{"name":"sensitive to tert-butyl hydroperoxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000797"}


id: GO:0140025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a contractile vacuole membrane and a site of discharge in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to docking and fusion.","definition_xrefs":["PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"contractile vacuole discharge","termid":"GO:0070177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"contractile vacuole tethering involved in discharge","synonyms":[{"name":"contractile vacuole tethering to plasma membrane","type":"narrow"}],"termid":"GO:0140025"}


id: PBO:0084811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; mCherry fusion protein localizes to the vacuole","termid":"PBO:0084811"}


id: PBO:0000994
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi anemia","termid":"PBO:0000994"}


id: FYPO:0000810
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121390,121392,121371,121385],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[121232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[121265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003973"},{"annotations":[121559,121558,121565,121566,121338,121372,121346,121339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[121249,121246,121234,121233,121237,121241],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[121226],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus organization is abnormal. Nucleus organization results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["GO:0006997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01374":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":17,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleus organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_04284","SJAG_05207","SJAG_03940","SJAG_03892","SJAG_01906","SJAG_01745","SJAG_04464","SJAG_03449","SJAG_01374","SJAG_01242","SJAG_03891"],"single_locus_genotype_uniquenames":["lem2delta","cmp7delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","nem1delta","ned1delta","nem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","nup61delta","vps4delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","nup132delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","alx1delta","vps32delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal nuclear organization","type":"exact"},{"name":"abnormal nucleus organisation","type":"exact"},{"name":"abnormal nucleus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000810","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0030891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_stress_during_vegetative_growth","termid":"PBO:0030891"}


id: MONDO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile dermatomyositis (obsolete MONDO:0005054)","termid":"MONDO:0005054","xrefs":{"Monarch":{"xref_id":"0005054"}}}


id: PBO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-clumped_colony_morphology_(obsolete_FYPO:0000153)","termid":"PBO:0031277"}


id: GO:0150088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from multiple dendrites.","definition_xrefs":["GOC:bc","PMID:22028887","PMID:10586883","PMID:11248111","PMID:7482800","PMID:8366344","GOC:aruk","PMID:24487234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting multiple dendrites","synonyms":[{"name":"MSB2","type":"exact"},{"name":"type 2 multi-synapse bouton","type":"exact"},{"name":"type 2 multi-synaptic bouton","type":"exact"},{"name":"type 2 multiple spine synapse bouton","type":"exact"},{"name":"type 2 multiple-synapse bouton","type":"exact"},{"name":"type 2 multisynapse bouton","type":"exact"},{"name":"type 2 multisynaptic bouton","type":"exact"}],"termid":"GO:0150088"}


id: FYPO:0001617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular isoleucine level","synonyms":[{"name":"decreased cellular L-isoleucine level","type":"exact"},{"name":"decreased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"decreased level of isoleucine in cell","type":"exact"},{"name":"reduced cellular isoleucine level","type":"exact"},{"name":"reduced level of isoleucine in cell","type":"exact"}],"termid":"FYPO:0001617"}


id: GO:0042731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PH domain (pleckstrin homology) of a protein, a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signaling or as constituents of the cytoskeleton.","definition_xrefs":["Pfam:PF00169","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"PH domain binding","termid":"GO:0042731"}


id: PBO:0042124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 197","termid":"PBO:0042124"}


id: PBO:0069201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 455, pseudogene","termid":"PBO:0069201"}


id: FYECO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amitrole (3-amino-1,2,4-triazole) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amitrole","synonyms":[{"name":"+ 3-AT","type":"exact"},{"name":"+ 3-amino-1,2,4-triazole","type":"exact"},{"name":"+ 3AT","type":"exact"}],"termid":"FYECO:0000251"}


id: MONDO:0012510
data:
  {"annotated_genes":["SJAG_02324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87815],"is_not":false,"summary":null,"term":"MONDO:0012510"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 2 is a rare mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by severe intrauterine growth retardation, neonatal limb edema and redundant skin on the neck (hydrops), developmental brain defects (corpus callosum agenesis, ventriculomegaly), brachydactyly, dysmorphic facial features with low set ears, severe intractable neonatal lactic acidosis with lethargy, hypotonia, absent spontaneous movements and fatal outcome. Markedly decreased activity of complex I, II + III and IV in muscle and liver have been determined.","definition_xrefs":["Orphanet:254920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17232","MEDGEN:400626","OMIM:610498","UMLS:C1864843","MESH:C566468","DOID:0111483","SCTID:764943000"],"synonyms":[{"name":"COXPD2","type":"exact"},{"name":"MRPS16 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 2","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPS16","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 2","type":"exact"},{"name":"corpus callosum, agenesis of, with Dysmorphism and fatal lactic acidosis","type":"related"}],"termid":"MONDO:0012510","terms_by_termid":{"MONDO:0012510":null},"xrefs":{"Monarch":{"xref_id":"0012510"}}}


id: MONDO:0028743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with brachydactyly with extraskeletal manifestations (obsolete MONDO:0028743)","termid":"MONDO:0028743","xrefs":{"Monarch":{"xref_id":"0028743"}}}


id: GO:0140968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of various organic cations in exchange for a proton, according to the reaction: H+(out) + organic cation(in) = H+(in) + organic cation(out). The transported substrates are usually toxic molecules, drugs and xenobiotics.","definition_xrefs":["PMID:17047166","PMID:17509534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"polyspecific organic cation:proton antiporter activity","secondary_identifiers":["TC:2.A.66.1.20"],"synonyms":[{"name":"proton:polyspecific organic cation antiporter activity","type":"related"}],"termid":"GO:0140968"}


id: FYPO:0006108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly is abnormal. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin fusion focus assembly","synonyms":[{"name":"abnormal actin fusion focus formation","type":"exact"}],"termid":"FYPO:0006108"}


id: PBO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 54, pseudogene","termid":"PBO:0044427"}


id: PR:C6Y4B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.14","synonyms":[{"name":"Spom972h-SPAC27E2.14","type":"exact"}],"termid":"PR:C6Y4B0"}


id: FYPO:0005495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription from CRE promoter","synonyms":[{"name":"expression of CRE target genes increased","type":"related"},{"name":"increased transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005495"}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17564681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


id: MONDO:1011645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, non-human animal","secondary_identifiers":["OMIA:001040"],"termid":"MONDO:1011645","xrefs":{"Monarch":{"xref_id":"1011645"}}}


id: PBO:0079555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 8","termid":"PBO:0079555"}


id: PBO:0069980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1275, pseudogene","termid":"PBO:0069980"}


id: GO:2000422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"}


id: GO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:14675537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"polyubiquitinated protein transport","synonyms":[{"name":"polyubiquitylated protein transport","type":"exact"}],"termid":"GO:0070844"}


id: PBO:0112002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, unknown specificity, implicated in vesicle fusion, possibly multiple pathways","termid":"PBO:0112002"}


id: PBO:0041384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 24","termid":"PBO:0041384"}


id: PR:O59856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl33 gene.","definition_xrefs":["UniProtKB:O59856","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L33, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.08c","synonyms":[{"name":"Spom972h-mrpl33","type":"exact"}],"termid":"PR:O59856"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: PBO:0038423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A2M antisense RNA 1","termid":"PBO:0038423"}


id: GO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ascorbate from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198870"],"synonyms":[{"name":"L-ascorbate transporter activity","type":"exact"},{"name":"vitamin C transporter activity","type":"exact"}],"termid":"GO:0015229"}


id: PBO:0058174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4469","termid":"PBO:0058174"}


id: GO:0035583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Confining TGFbeta to the extracellular matrix (ECM) such that it is separated from other components of the signaling pathway, including its cell surface receptor. TGFbeta is secreted as part of a latent complex that is targeted to the extracellular matrix through latent-TGFbeta-binding protein (LTBP)-mediated association with matrix proteins.","definition_xrefs":["GOC:signaling","PMID:20855508","GOC:bf","GOC:BHF","PMID:12482908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0030512"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"is_a","term_name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of TGFbeta in extracellular matrix","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signaling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"negative regulation of transforming growth factor beta receptor signalling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"sequestering of TGFbeta LLC in extracellular matrix","type":"exact"},{"name":"sequestering of TGFbeta large latency complex in extracellular matrix","type":"exact"}],"termid":"GO:0035583"}


id: PBO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 1","termid":"PBO:0060171"}


id: MONDO:0008991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Verloove Vanhorick-Brubakk syndrome is a multiple congenital anomalies/dysmorphic syndrome characterized by multiple skeletal malformations (short femora and humeri, bilateral absence of metatarsal and metacarpal bone in hands and feet, bilateral partial syndactyly of fingers and toes or oligopolysyndactyly, deformed lumbosacral spine), congenital heart disease (truncus arteriosus), lung and urogenital malformations (bilateral bilobar lungs, horseshoe kidney, cryptorchidism), and facial malformations (bilateral cleft lip and palate, micrognathia, small, low-set ears without external meatus). It is lethal in the neonatal period. There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:3429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Verloove Vanhorick-Brubakk syndrome","secondary_identifiers":["OMIM:215850","MESH:C536541","UMLS:C1859082","GARD:5482","SCTID:764697003","MEDGEN:395171"],"synonyms":[{"name":"Clh syndrome","type":"related"},{"name":"Verloove Vanhorick Brubakk syndrome","type":"related"},{"name":"cleft limb heart malformation syndrome","type":"related"},{"name":"cleft lip-limb and heart malformations syndrome","type":"exact"},{"name":"cleft-limb-heart malformation syndrome","type":"related"},{"name":"cleft-limb-heart malformation syndrome syndrome","type":"exact"}],"termid":"MONDO:0008991","xrefs":{"Monarch":{"xref_id":"0008991"}}}


id: PBO:0068821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 59, pseudogene","termid":"PBO:0068821"}


id: PBO:0073232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 5","termid":"PBO:0073232"}


id: GO:0033378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protease to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to T cell secretory granule","termid":"GO:0033376"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of protease localization to T cell secretory granule","synonyms":[{"name":"establishment of protease localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protease localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033378"}


id: PBO:0004222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein Ubr1","termid":"PBO:0004222"}


id: PBO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup124","termid":"PBO:0000781"}


id: PBO:0073814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 16","termid":"PBO:0073814"}


id: PBO:0078041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 31","termid":"PBO:0078041"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_03086","SJAG_01993","SJAG_00677","SJAG_02700","SJAG_01384","SJAG_02245","SJAG_01268","SJAG_00279","SJAG_01894","SJAG_02566","SJAG_04100","SJAG_04479","SJAG_00521","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66029,67872,95719,99647,100763],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[77320,81987,94217,80930],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[78514,79158,68635,81230,69535],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010","GO:0065003"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0051016":null}}


id: PBO:0114110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"much shorter than S. c Ina22, butpicked up by Jackhmmr with good score/motif conservation","termid":"PBO:0114110"}


id: MONDO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial 9q22.3 microdeletion is associated with a phenotype including macrocephaly, overgrowth and trigonocephaly. Psychomotor delay, hyperactivity and distinctive facial features were also observed. It has been described in two unrelated children.","definition_xrefs":["Orphanet:77301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 9q22.3","secondary_identifiers":["MESH:C579873","SCTID:724098008","UMLS:C3711390","GARD:18934","MEDGEN:777998"],"synonyms":[{"name":"microdeletion 9q22.3","type":"exact"}],"termid":"MONDO:0019179","xrefs":{"Monarch":{"xref_id":"0019179"}}}


id: GO:1904775
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91069],"is_not":false,"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquinone biosynthetic process.","definition_xrefs":["PMID:8125303","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of ubiquinone biosynthetic process","termid":"GO:0010795"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006744"],"is_obsolete":false,"name":"positive regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of coenzyme Q biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone anabolism","type":"narrow"},{"name":"activation of ubiquinone biosynthesis","type":"narrow"},{"name":"activation of ubiquinone biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone formation","type":"narrow"},{"name":"activation of ubiquinone synthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"positive regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"positive regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"positive regulation of ubiquinone anabolism","type":"exact"},{"name":"positive regulation of ubiquinone biosynthesis","type":"exact"},{"name":"positive regulation of ubiquinone formation","type":"exact"},{"name":"positive regulation of ubiquinone synthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up regulation of ubiquinone anabolism","type":"exact"},{"name":"up regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up regulation of ubiquinone formation","type":"exact"},{"name":"up regulation of ubiquinone synthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up-regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up-regulation of ubiquinone anabolism","type":"exact"},{"name":"up-regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up-regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up-regulation of ubiquinone formation","type":"exact"},{"name":"up-regulation of ubiquinone synthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"upregulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"upregulation of ubiquinone anabolism","type":"exact"},{"name":"upregulation of ubiquinone biosynthesis","type":"exact"},{"name":"upregulation of ubiquinone biosynthetic process","type":"exact"},{"name":"upregulation of ubiquinone formation","type":"exact"},{"name":"upregulation of ubiquinone synthesis","type":"exact"}],"termid":"GO:1904775","terms_by_termid":{"GO:1904775":null}}


id: PBO:0066784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 82","termid":"PBO:0066784"}


id: PBO:0120007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 64, pseudogene","termid":"PBO:0120007"}


id: MONDO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal pathological resorption of tooth","secondary_identifiers":["DOID:13239","ICD9:521.41","SCTID:52994003","MEDGEN:540237","UMLS:C0266880"],"synonyms":[{"name":"internal granuloma of pulp","type":"related"},{"name":"internal pathologic resorption","type":"exact"},{"name":"internal pathological resorption","type":"related"},{"name":"internal resorption of crown of tooth","type":"related"},{"name":"internal resorption of tooth","type":"exact"},{"name":"pathological tooth resorption - internal","type":"related"},{"name":"pink spot lesion of tooth","type":"related"},{"name":"pink tooth of mummery","type":"related"}],"termid":"MONDO:0001668","xrefs":{"Monarch":{"xref_id":"0001668"}}}


id: MONDO:0017845
data:
  {"annotated_genes":["SJAG_01179","SJAG_00721","SJAG_01417","SJAG_16456","SJAG_00797","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958009"},{"annotations":[88590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012651"},{"annotations":[87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012664"},{"annotations":[88922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013354"},{"annotations":[88513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013776"},{"annotations":[87633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00721":null,"SJAG_00773":null,"SJAG_00797":null,"SJAG_01179":null,"SJAG_01417":null,"SJAG_16456":null},"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:108600","MESH:C564815","UMLS:C1849156","GARD:21401","ICD10CM:G11.4","Orphanet:316226","DOID:0050952","MEDGEN:376528"],"synonyms":[{"name":"SPAX","type":"exact"}],"termid":"MONDO:0017845","terms_by_termid":{"MONDO:0012651":null,"MONDO:0012664":null,"MONDO:0013354":null,"MONDO:0013776":null,"MONDO:0014803":null,"MONDO:0958009":null},"xrefs":{"Monarch":{"xref_id":"0017845"}}}


id: MONDO:0011671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease-like 2 (HDL2) is a severe neurodegenerative disorder considered part of the neuroacanthocytosis syndromes characterized by a triad of movement, psychiatric, and cognitive abnormalities.","definition_xrefs":["Orphanet:98934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroacanthocytosis","termid":"MONDO:0016987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like 2","secondary_identifiers":["SCTID:721228006","OMIM:606438","MESH:C564708","DOID:0090104","MEDGEN:341120","GARD:16874","UMLS:C1847987"],"synonyms":[{"name":"HDL2","type":"exact"},{"name":"Huntington disease-like 2","type":"exact"},{"name":"Huntington disease-like type 2","type":"exact"},{"name":"Huntington's disease-like 2","type":"related"}],"termid":"MONDO:0011671","xrefs":{"Monarch":{"xref_id":"0011671"}}}


id: PBO:0042221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 2","termid":"PBO:0042221"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:12709052","RESID:AA0271","PubMed:9237682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: GO:0050249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + Renilla luciferin = adenosine 3',5'-diphosphate + H+ + luciferyl sulfate.","definition_xrefs":["EC:2.8.2.10","RHEA:20481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"Renilla-luciferin sulfotransferase activity","secondary_identifiers":["MetaCyc:RENILLA-LUCIFERIN-SULFOTRANSFERASE-RXN","KEGG_REACTION:R03138"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:Renilla luciferin sulfotransferase activity","type":"related"},{"name":"Renilla-luciferin sulphotransferase activity","type":"exact"},{"name":"luciferin sulfokinase (3'-phosphoadenylyl sulfate:luciferin sulfotransferase)","type":"related"},{"name":"luciferin sulfokinase activity","type":"related"},{"name":"luciferin sulfotransferase activity","type":"broad"}],"termid":"GO:0050249"}


id: PBO:0054473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1873","termid":"PBO:0054473"}


id: PBO:0082418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional HMG aldolase/oxaloacetate decarboxylase; requires divalent metal ions for activity; competitively inhibited by oxalate; forms a ring-shaped homotrimer; similar to members of the prokaryotic RraA family of class II (divalent metal ion dependent) pyruvate aldolases from the meta cleavage pathways of protocatechuate and gallate","termid":"PBO:0082418"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: PBO:0084339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore protein; associated with the essential kinetochore proteins Nnf1p and Spc24p; phosphorylated by Clb5-Cdk1, Mps1p, Ipl1p and to a lesser extent by Clb2-Cdk1; localizes to the lower region of the Ndc80 complex during anaphase and regulates KMN activity by inhibiting the Mtw1 and Spc105 complexes from binding to the Ndc80 complex; similar to metazoan CENP-T","termid":"PBO:0084339"}


id: PATO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of whether the bearer exhibits the ability to move spontaneously.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular motility","termid":"PATO:0001488"}


id: MONDO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the lungs, abdominal viscera, bones and or central nervous system.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic mycosis","secondary_identifiers":["DOID:0050136","MEDGEN:639956","SCTID:399314004","ICD9:117.9","UMLS:C0553576"],"synonyms":[{"name":"systemic fungal infection","type":"related"}],"termid":"MONDO:0000256","xrefs":{"Monarch":{"xref_id":"0000256"}}}


id: GO:1990250
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of identifying lesions in DNA on the actively transcribed strand of the DNA duplex as well as a small subset of lesions not recognized by the general nucleotide-excision repair pathway. The wide range of substrate specificity suggests that the repair complex recognizes distortions in the DNA helix. It subsequently recruits a nucleotide-excision repair, preincision complex.","definition_xrefs":["GOC:bhm","PMID:22331906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990250"}


id: PBO:0036061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_eMTOC_during_vegetative_growth","termid":"PBO:0036061"}


id: PBO:0018135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A transmembrane transporter Bfr1","termid":"PBO:0018135"}


id: MONDO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the anal canal or anal margin. Representative examples of benign neoplasms include squamous papilloma and papillary hidradenoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and melanoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus neoplasm","secondary_identifiers":["DOID:4551","MEDGEN:360","EFO:0003835","MESH:D001005","NCIT:C2877","SCTID:126849006","UMLS:C0003463"],"synonyms":[{"name":"anal neoplasm","type":"exact"},{"name":"anal neoplasms, benign and malignant","type":"exact"},{"name":"anal tumor","type":"exact"},{"name":"anal tumors","type":"exact"},{"name":"anal tumour","type":"exact"},{"name":"anal tumours","type":"exact"},{"name":"anus neoplasm","type":"exact"},{"name":"anus neoplasm (disease)","type":"exact"},{"name":"anus tumor","type":"exact"},{"name":"anus tumour","type":"exact"},{"name":"neoplasm of anus","type":"exact"},{"name":"neoplasm of the anus","type":"exact"},{"name":"tumor of anus","type":"exact"},{"name":"tumor of the anus","type":"exact"},{"name":"tumour of anus","type":"exact"},{"name":"tumour of the anus","type":"exact"}],"termid":"MONDO:0003046","xrefs":{"Monarch":{"xref_id":"0003046"}}}


id: MONDO:0007540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia Type 1 (MEN1) is a frequent form of MEN, a rare inherited cancer syndrome, characterized by the development of neuroendocrine tumors of the parathyroid, pancreas, and anterior pituitary gland, and less commonly the adrenal cortical gland, with other non-endocrine tumors in some patients.","definition_xrefs":["Orphanet:652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial primary hyperparathyroidism","termid":"MONDO:0016365"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia","termid":"MONDO:0017169"},{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple endocrine neoplasia type 1","secondary_identifiers":["SCTID:30664006","UMLS:C0025267","MEDGEN:9957","icd11.foundation:1638765741","ICD9:237.4","GARD:3829","MedDRA:10028190","MESH:D018761","ICD9:258.01","NCIT:C3225","NANDO:2200405","NORD:1466","DOID:10017","OMIM:131100"],"synonyms":[{"name":"MEA 1","type":"related"},{"name":"MEA type 1","type":"exact"},{"name":"MEA type I","type":"exact"},{"name":"MEN1","type":"exact"},{"name":"MEN1 multiple endocrine neoplasia","type":"exact"},{"name":"MEN1 somatic mutations","type":"related"},{"name":"MEN1 syndrome","type":"exact"},{"name":"Wermer syndrome","type":"exact"},{"name":"Wermer's syndrome","type":"exact"},{"name":"endocrine adenomatosis multiple","type":"related"},{"name":"endocrine adenomatosis, multiple","type":"related"},{"name":"men 1","type":"exact"},{"name":"men type 1","type":"exact"},{"name":"men type I","type":"exact"},{"name":"multiple endocrine adenomatosis","type":"broad"},{"name":"multiple endocrine adenomatosis type 1","type":"exact"},{"name":"multiple endocrine adenomatosis type I","type":"exact"},{"name":"multiple endocrine adenomatosis, type I","type":"exact"},{"name":"multiple endocrine neoplasia 1","type":"exact"},{"name":"multiple endocrine neoplasia caused by mutation in MEN1","type":"exact"},{"name":"multiple endocrine neoplasia type 1","type":"exact"},{"name":"multiple endocrine neoplasia type 1 syndrome","type":"exact"},{"name":"multiple endocrine neoplasia type I","type":"exact"},{"name":"multiple endocrine neoplasia, type 1","type":"related"},{"name":"multiple endocrine neoplasia, type I","type":"exact"}],"termid":"MONDO:0007540","xrefs":{"Monarch":{"xref_id":"0007540"}}}


id: PBO:0056955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19a","termid":"PBO:0056955"}


id: PBO:0088703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP4 subunit Gfh1","termid":"PBO:0088703"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:148","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: MONDO:0020725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia due to a disorder that is persistent or long-standing in nature.","definition_xrefs":["NCIT:C35659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia due to chronic disorder","secondary_identifiers":["UMLS:C0002873","MEDGEN:507442","ICD9:285.29","SCTID:234347009"],"synonyms":[{"name":"Secondary anaemia","type":"related"},{"name":"Secondary anemia","type":"related"},{"name":"anaemia due to Chronic Disorder","type":"related"},{"name":"anaemia of chronic disease","type":"exact"},{"name":"anaemia of chronic disorder","type":"related"},{"name":"anaemia of chronic illness","type":"exact"},{"name":"anaemia of chronic inflammation","type":"exact"},{"name":"anaemia of systemic disease","type":"related"},{"name":"anemia due to Chronic Disorder","type":"related"},{"name":"anemia due to chronic disorder","type":"exact"},{"name":"anemia of chronic disease","type":"exact"},{"name":"anemia of chronic disorder","type":"related"},{"name":"anemia of chronic illness","type":"exact"},{"name":"anemia of chronic inflammation","type":"exact"},{"name":"anemia of systemic disease","type":"related"}],"termid":"MONDO:0020725","xrefs":{"Monarch":{"xref_id":"0020725"}}}


id: PATO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conspicuous","synonyms":[{"name":"distinct","type":"related"}],"termid":"PATO:0000463"}


id: PBO:0080401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B late endosome and lysosome associated","termid":"PBO:0080401"}


id: GO:1903920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament severing.","definition_xrefs":["PMID:23325791","GOC:als","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"positively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament severing","synonyms":[{"name":"activation of F-actin severing","type":"narrow"},{"name":"activation of actin filament severing","type":"narrow"},{"name":"activation of actin filament severing activity","type":"related"},{"name":"activation of barbed-end actin capping/severing activity","type":"related"},{"name":"positive regulation of F-actin severing","type":"exact"},{"name":"positive regulation of actin filament severing activity","type":"related"},{"name":"positive regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"up regulation of F-actin severing","type":"exact"},{"name":"up regulation of actin filament severing","type":"exact"},{"name":"up regulation of actin filament severing activity","type":"related"},{"name":"up regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"up-regulation of F-actin severing","type":"exact"},{"name":"up-regulation of actin filament severing","type":"exact"},{"name":"up-regulation of actin filament severing activity","type":"related"},{"name":"up-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"upregulation of F-actin severing","type":"exact"},{"name":"upregulation of actin filament severing","type":"exact"},{"name":"upregulation of actin filament severing activity","type":"related"},{"name":"upregulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903920"}


id: MONDO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiglic acidemia","secondary_identifiers":["UMLS:C1848793","MEDGEN:376443","ICD9:270.8","OMIM:275190","MESH:C536921","SCTID:444755001"],"synonyms":[{"name":"disorder of isoleucine metabolism","type":"related"},{"name":"tiglic acidemia","type":"exact"}],"termid":"MONDO:0010141","xrefs":{"Monarch":{"xref_id":"0010141"}}}


id: PBO:0113304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; binds and transfers parental H3-H4 to Pol32p facilitating the transfer of parental histones to the lagging strand via Pol1p during DNA replication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0113304"}


id: PBO:0076928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Dp-2","termid":"PBO:0076928"}


id: GO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-vacuole transport vesicle (obsolete GO:0005809)","synonyms":[{"name":"Golgi-vacuole transport vesicle","type":"exact"}],"termid":"GO:0005809"}


id: PBO:0064800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 catalytic subunit beta","termid":"PBO:0064800"}


id: GO:0060012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of glycine from a presynapse, across a chemical synapse, the subsequent activation of glycine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic transmission, glycinergic","synonyms":[{"name":"glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060012"}


id: PBO:0075870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 10","termid":"PBO:0075870"}


id: PBO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase (predicted)","termid":"PBO:0005558"}


id: GO:0106077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of an succinyl group.","definition_xrefs":["PMID:29211711"],"gene_count":0,"genotype_count":0,"name":"obsolete histone succinylation (obsolete GO:0106077)","termid":"GO:0106077"}


id: MONDO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to sperm disorder (obsolete MONDO:0018390)","secondary_identifiers":["Orphanet:399771"],"termid":"MONDO:0018390","xrefs":{"Monarch":{"xref_id":"0018390"}}}


id: GO:0016841
data:
  {"annotated_genes":["SJAG_00830","SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008721"},{"annotations":[79265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.1.-"],"termid":"GO:0016841","terms_by_termid":{"GO:0004794":null,"GO:0008721":null}}


id: GO:1900758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of D-amino-acid oxidase activity (obsolete GO:1900758)","synonyms":[{"name":"down regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down regulation of new yellow enzyme","type":"related"},{"name":"down-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down-regulation of new yellow enzyme","type":"related"},{"name":"downregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"downregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"downregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"downregulation of new yellow enzyme","type":"related"},{"name":"inhibition of D-amino-acid oxidase activity","type":"narrow"},{"name":"inhibition of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"inhibition of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"inhibition of new yellow enzyme","type":"related"},{"name":"negative regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"negative regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"negative regulation of new yellow enzyme","type":"related"}],"termid":"GO:1900758"}


id: MONDO:1012362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor dysplasia, non-human animal","termid":"MONDO:1011987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor dysplasia, dog","secondary_identifiers":["OMIA:001311-9615"],"termid":"MONDO:1012362","xrefs":{"Monarch":{"xref_id":"1012362"}}}


id: GO:0032559
data:
  {"annotated_genes":["SJAG_02610","SJAG_04537","SJAG_01419","SJAG_03141","SJAG_01159","SJAG_03846","SJAG_03660","SJAG_03320","SJAG_03567","SJAG_03892","SJAG_01571","SJAG_00243","SJAG_02498","SJAG_01618","SJAG_02897","SJAG_04566","SJAG_03345","SJAG_01383","SJAG_05025","SJAG_00583","SJAG_01047","SJAG_04287","SJAG_01245","SJAG_03386","SJAG_04469","SJAG_04001","SJAG_00332","SJAG_00855","SJAG_01351","SJAG_04230","SJAG_03811","SJAG_04755","SJAG_01435","SJAG_02796","SJAG_03886","SJAG_00898","SJAG_00412","SJAG_02690","SJAG_03077","SJAG_01837","SJAG_01400","SJAG_02394","SJAG_04147","SJAG_02721","SJAG_00443","SJAG_03224","SJAG_02720","SJAG_03798","SJAG_04468","SJAG_01240","SJAG_03129","SJAG_01489","SJAG_04125","SJAG_03669","SJAG_01010","SJAG_01186","SJAG_04114","SJAG_03676","SJAG_00887","SJAG_02545","SJAG_01575","SJAG_02460","SJAG_01677","SJAG_00337","SJAG_01680","SJAG_04355","SJAG_04232","SJAG_04126","SJAG_00757","SJAG_03237","SJAG_02236","SJAG_02286","SJAG_01344","SJAG_04507","SJAG_01616","SJAG_04760","SJAG_00999","SJAG_04745","SJAG_01499","SJAG_01352","SJAG_04772","SJAG_01644","SJAG_00488","SJAG_01297","SJAG_05022","SJAG_02619","SJAG_02760","SJAG_01807","SJAG_03785","SJAG_04461","SJAG_04280","SJAG_01942","SJAG_03160","SJAG_02183","SJAG_02421","SJAG_04210","SJAG_00039","SJAG_01805","SJAG_03438","SJAG_04693","SJAG_01179","SJAG_03209","SJAG_01148","SJAG_01611","SJAG_03570","SJAG_03585","SJAG_00403","SJAG_00475","SJAG_00604","SJAG_01615","SJAG_00878","SJAG_01500","SJAG_03140","SJAG_02082","SJAG_01081","SJAG_00358","SJAG_01877","SJAG_06642","SJAG_04206","SJAG_03909","SJAG_04094","SJAG_03451","SJAG_02604","SJAG_04845","SJAG_02564","SJAG_01315","SJAG_00533","SJAG_03950","SJAG_00669","SJAG_04480","SJAG_03689","SJAG_01546","SJAG_04486","SJAG_00114","SJAG_03626","SJAG_01176","SJAG_03545","SJAG_00420","SJAG_00106","SJAG_02342","SJAG_00661","SJAG_01577","SJAG_01402","SJAG_02077","SJAG_02348","SJAG_02887","SJAG_03832","SJAG_03850","SJAG_03355","SJAG_00815","SJAG_03011","SJAG_02723","SJAG_04482","SJAG_02738","SJAG_00004","SJAG_03728","SJAG_00447","SJAG_00610","SJAG_02226","SJAG_03780","SJAG_03421","SJAG_05173","SJAG_03193","SJAG_02748","SJAG_02287","SJAG_01791","SJAG_00293","SJAG_01944","SJAG_00704","SJAG_04372","SJAG_01070","SJAG_03967","SJAG_04665","SJAG_02206","SJAG_04064","SJAG_02399","SJAG_01762","SJAG_03496","SJAG_00436","SJAG_01724","SJAG_04577","SJAG_03592","SJAG_03145","SJAG_01024","SJAG_00649","SJAG_02872","SJAG_04156","SJAG_00198","SJAG_01669","SJAG_02457","SJAG_04552","SJAG_01831","SJAG_06597","SJAG_01653","SJAG_04473","SJAG_03157","SJAG_02267","SJAG_03495","SJAG_01311","SJAG_02563","SJAG_05290","SJAG_01878","SJAG_04974","SJAG_04465","SJAG_04634","SJAG_01354","SJAG_00208","SJAG_00381","SJAG_03362","SJAG_01544","SJAG_01084","SJAG_04622","SJAG_04599","SJAG_01799","SJAG_00633","SJAG_00933","SJAG_00042","SJAG_03708","SJAG_00857","SJAG_03932","SJAG_03409","SJAG_04970","SJAG_01131","SJAG_01797","SJAG_04544","SJAG_00993","SJAG_02875","SJAG_03471","SJAG_00938","SJAG_00653","SJAG_00330","SJAG_00718","SJAG_01718","SJAG_04597","SJAG_02575","SJAG_02713","SJAG_01510","SJAG_03257","SJAG_02926","SJAG_02428","SJAG_00605","SJAG_04154","SJAG_02618","SJAG_04849","SJAG_01405","SJAG_03658","SJAG_00871","SJAG_02708","SJAG_03486","SJAG_01259","SJAG_03896","SJAG_05276","SJAG_02294","SJAG_00353","SJAG_00529","SJAG_00464","SJAG_02906","SJAG_01704","SJAG_01679","SJAG_02725","SJAG_02596","SJAG_03363","SJAG_04187","SJAG_03277","SJAG_04285","SJAG_00984","SJAG_05313","SJAG_04650","SJAG_01181","SJAG_02712","SJAG_00980","SJAG_03479","SJAG_01587","SJAG_03709","SJAG_01938","SJAG_02199","SJAG_00541","SJAG_04573","SJAG_03927","SJAG_00947","SJAG_00956","SJAG_01620","SJAG_00786","SJAG_02889","SJAG_04409","SJAG_03557","SJAG_02736","SJAG_02517","SJAG_00995","SJAG_04258","SJAG_04167","SJAG_02431","SJAG_01000","SJAG_02997","SJAG_01082","SJAG_05340","SJAG_00169","SJAG_03336","SJAG_02680","SJAG_01859","SJAG_00931","SJAG_03534","SJAG_04655","SJAG_04840","SJAG_03061","SJAG_04150","SJAG_00996","SJAG_02835","SJAG_01373","SJAG_00390","SJAG_00986","SJAG_04700","SJAG_03449","SJAG_04118","SJAG_04121","SJAG_00136","SJAG_04549","SJAG_04589","SJAG_03071","SJAG_04276","SJAG_03497","SJAG_01918","SJAG_02879","SJAG_01684","SJAG_02950","SJAG_01471","SJAG_03384","SJAG_03720","SJAG_02838","SJAG_05295","SJAG_02392","SJAG_04762","SJAG_00516","SJAG_05018","SJAG_00650","SJAG_03813","SJAG_01885","SJAG_03887","SJAG_02295","SJAG_01595","SJAG_00597","SJAG_02382","SJAG_02878","SJAG_01254","SJAG_04457","SJAG_02571","SJAG_00851","SJAG_05194","SJAG_00690","SJAG_03436","SJAG_01530","SJAG_04277","SJAG_00773","SJAG_03096","SJAG_01522","SJAG_00044","SJAG_03703","SJAG_00150","SJAG_03036","SJAG_00963","SJAG_01964","SJAG_02038","SJAG_00331","SJAG_00729","SJAG_04394","SJAG_03349","SJAG_05372","SJAG_00342","SJAG_02370","SJAG_03526","SJAG_00402","SJAG_04334","SJAG_00845","SJAG_02592","SJAG_04612","SJAG_00084","SJAG_03866","SJAG_03213","SJAG_01376","SJAG_03679","SJAG_01447","SJAG_05019","SJAG_04055","SJAG_01863","SJAG_04734","SJAG_01474","SJAG_02923","SJAG_00638","SJAG_04320","SJAG_00779","SJAG_00300","SJAG_02686","SJAG_02336","SJAG_04511","SJAG_02061","SJAG_02643","SJAG_01080","SJAG_01613","SJAG_00798","SJAG_03659","SJAG_03475","SJAG_02022","SJAG_00881","SJAG_00766","SJAG_04657","SJAG_05024","SJAG_04312","SJAG_00111","SJAG_00378","SJAG_02242","SJAG_01018","SJAG_04203","SJAG_02378","SJAG_01182","SJAG_04692","SJAG_02084","SJAG_03533","SJAG_05105","SJAG_03987","SJAG_04747","SJAG_02104","SJAG_05304","SJAG_04288","SJAG_04282","SJAG_03613","SJAG_05010","SJAG_02426","SJAG_02429","SJAG_03897","SJAG_04268","SJAG_00103","SJAG_02704","SJAG_00359","SJAG_00244","SJAG_02468","SJAG_03946","SJAG_01052","SJAG_00875","SJAG_03313","SJAG_03501","SJAG_00392","SJAG_03898","SJAG_03457","SJAG_02558","SJAG_04669","SJAG_04189","SJAG_03730","SJAG_02015","SJAG_03048","SJAG_03982","SJAG_02785","SJAG_04757","SJAG_04038","SJAG_02527","SJAG_00616","SJAG_05353","SJAG_04477","SJAG_01855","SJAG_00884","SJAG_02249","SJAG_03376","SJAG_01787","SJAG_03789","SJAG_00790","SJAG_02187","SJAG_05213","SJAG_01002","SJAG_04865","SJAG_03017","SJAG_00486","SJAG_00964","SJAG_02182","SJAG_00930","SJAG_00712","SJAG_02602","SJAG_03069","SJAG_02994","SJAG_03854","SJAG_04183","SJAG_04761","SJAG_04052","SJAG_00678","SJAG_00500","SJAG_01197","SJAG_00636","SJAG_01410","SJAG_01937","SJAG_01129","SJAG_03948","SJAG_04857","SJAG_01664","SJAG_03206","SJAG_02895","SJAG_02808","SJAG_02420","SJAG_03923","SJAG_16456","SJAG_01221","SJAG_00863","SJAG_01268","SJAG_00427","SJAG_05231","SJAG_00252","SJAG_01874","SJAG_02521","SJAG_03753","SJAG_03067","SJAG_04081","SJAG_16455","SJAG_01731","SJAG_04738","SJAG_00256","SJAG_02825","SJAG_01825","SJAG_04777","SJAG_02977","SJAG_00356","SJAG_02058","SJAG_01152","SJAG_02074","SJAG_04856","SJAG_01198","SJAG_01164","SJAG_05209","SJAG_03174","SJAG_02200","SJAG_04435","SJAG_02615","SJAG_00599","SJAG_02400","SJAG_01816","SJAG_01040","SJAG_01953","SJAG_00564","SJAG_03602","SJAG_05249","SJAG_02991","SJAG_02741","SJAG_03529","SJAG_04882","SJAG_01235","SJAG_04946","SJAG_00364","SJAG_00988","SJAG_00853","SJAG_04551","SJAG_00048","SJAG_02822","SJAG_00609","SJAG_04495","SJAG_02364","SJAG_03799","SJAG_01945","SJAG_00168","SJAG_02598","SJAG_00329","SJAG_04874","SJAG_02698","SJAG_04980","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91095,94748,74500,71714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043531"},{"annotations":[70354,75704,90760,71768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016208"},{"annotations":[112529,57164,71270,59564,62383,67993,114964,61591,68014,61279,59028,65614,68962,66828,57364,66287,61314,58304,57459,68410,70189,65130,59129,58223,70604,58913,57572,64859,60744,68823,67325,61641,68983,61571,62586,67534,69524,61729,69834,94040,60593,65640,57474,63636,57676,65220,67218,70667,70361,74501,63332,58823,59621,64129,100725,67486,67446,57536,57002,66104,60300,58737,64316,70348,63591,106601,58654,57730,64857,66835,116076,61790,63517,67171,106274,59409,64216,115188,57410,59192,64880,64148,64742,68179,69001,58614,57958,60824,70532,62919,62497,59645,64357,66506,59000,62197,60000,69632,68090,62666,65874,66056,69351,63668,64719,78241,68102,70838,57029,62771,91097,57618,58486,116535,60422,59655,61840,69813,95594,68880,70863,63417,61705,69006,60210,119957,66672,66679,67841,68710,58944,62045,65354,68394,115602,59011,59864,71311,70747,66300,67672,60631,67862,69450,62425,67735,69086,59272,61377,70871,79564,61607,58490,59857,69114,66531,57861,90954,69371,60922,67527,62052,68815,61755,62548,70861,61694,64405,62008,57072,62615,71061,67927,74214,67723,59666,64849,58830,70005,71317,102033,115099,63832,63146,69604,57940,71191,66147,58268,66275,63082,67815,70711,61666,66436,64568,70660,98411,59330,60996,57906,114963,61085,60038,69438,57380,69719,57660,110487,70043,93447,63770,61372,57589,67428,69492,60759,65788,60438,65997,71260,62711,65993,70403,66172,57930,57718,63400,64694,67366,57505,69149,67519,69585,66388,67969,71120,70501,63308,67145,68463,69790,57280,64057,70328,57188,60548,57329,58509,58638,62031,64390,66468,74434,67915,61688,58183,61480,64799,60637,70997,65214,62635,58628,58137,64980,59353,66639,68325,105272,116130,66154,64046,63077,59199,70979,61101,71512,71485,67263,58954,59517,63945,59867,71129,61300,63199,69562,68343,70157,59598,65694,59476,64327,117721,62026,59216,60454,60135,67822,60293,107201,62055,60309,60527,70228,59257,59321,64242,70081,57356,67399,63017,58703,58935,60945,113083,66476,71715,62486,93051,68975,69597,66431,66808,59161,91727,62437,60131,61971,65241,61026,57271,61307,74718,70576,59771,61156,65230,59444,90252,66016,107462,71153,60482,105775,64164,68241,59751,70087,68499,101271,70449,73864,57770,66992,69126,82012,110529,60787,120018,63645,62767,57120,110147,107560,57832,117786,58536,114967,61058,57756,71276,58784,64545,68850,60400,58540,65893,67309,60058,69393,67506,63043,59342,59420,70427,57918,71516,76095,69581,66409,69778,69460,57469,60357,65724,62836,63575,64578,62213,66773,67002,58343,63526,65706,63550,67507,109922,58253,64866,62999,67020,68266,69067,103046,63009,64209,71137,71263,75862,68286,91380,70639,68367,61125,70330,69540,67891,62332,62039,60096,68056,66894,66605,71499,71398,57415,57495,59065,65556,59579,57654,66442,69776,62274,66085,65093,65766,60702,68543,69346,58307,68035,68600,69933,60658,69021,101621,59286,59041,60155,67656,115433,71416,58430,58856,70471,58585,67135,65070,63071,67381,59345,57196,61273,59874,66838,118043,65588,64230,67149,62183,64949,65383,66935,59619,69567,73485,60317,58334,58968,70707,65806,69850,68787,58076,64123,70309,69217,104618,65043,63459,66239,79215,65330,58711,65395,104209,66582,58893,63995,70300,63541,57523,71163,70946,65583,61224,64434,69861,59662,62501,67718,68256,65539,58761,60174,69435,60725,58661,63463,63676,69037,69726,62854,64625,59155,64378,57671,60022,70358,70164,58154,61855,57435,60273,62359,58082,90679,59053,113389,66390,70069,99422,67237,101070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005524"},{"annotations":[72736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030552"}]},"cv_name":"molecular_function","definition":"Binding to an adenyl ribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"}],"gene_count":560,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00039":null,"SJAG_00042":null,"SJAG_00044":null,"SJAG_00048":null,"SJAG_00084":null,"SJAG_00103":null,"SJAG_00106":null,"SJAG_00111":null,"SJAG_00114":null,"SJAG_00136":null,"SJAG_00150":null,"SJAG_00168":null,"SJAG_00169":null,"SJAG_00198":null,"SJAG_00208":null,"SJAG_00243":null,"SJAG_00244":null,"SJAG_00252":null,"SJAG_00256":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00329":null,"SJAG_00330":null,"SJAG_00331":null,"SJAG_00332":null,"SJAG_00337":null,"SJAG_00342":null,"SJAG_00353":null,"SJAG_00356":null,"SJAG_00358":null,"SJAG_00359":null,"SJAG_00364":null,"SJAG_00378":null,"SJAG_00381":null,"SJAG_00390":null,"SJAG_00392":null,"SJAG_00402":null,"SJAG_00403":null,"SJAG_00412":null,"SJAG_00420":null,"SJAG_00427":null,"SJAG_00436":null,"SJAG_00443":null,"SJAG_00447":null,"SJAG_00464":null,"SJAG_00475":null,"SJAG_00486":null,"SJAG_00488":null,"SJAG_00500":null,"SJAG_00516":null,"SJAG_00529":null,"SJAG_00533":null,"SJAG_00541":null,"SJAG_00564":null,"SJAG_00583":null,"SJAG_00597":null,"SJAG_00599":null,"SJAG_00604":null,"SJAG_00605":null,"SJAG_00609":null,"SJAG_00610":null,"SJAG_00616":null,"SJAG_00633":null,"SJAG_00636":null,"SJAG_00638":null,"SJAG_00649":null,"SJAG_00650":null,"SJAG_00653":null,"SJAG_00661":null,"SJAG_00669":null,"SJAG_00678":null,"SJAG_00690":null,"SJAG_00704":null,"SJAG_00712":null,"SJAG_00718":null,"SJAG_00729":null,"SJAG_00757":null,"SJAG_00766":null,"SJAG_00773":null,"SJAG_00779":null,"SJAG_00786":null,"SJAG_00790":null,"SJAG_00798":null,"SJAG_00815":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00853":null,"SJAG_00855":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00871":null,"SJAG_00875":null,"SJAG_00878":null,"SJAG_00881":null,"SJAG_00884":null,"SJAG_00887":null,"SJAG_00898":null,"SJAG_00930":null,"SJAG_00931":null,"SJAG_00933":null,"SJAG_00938":null,"SJAG_00947":null,"SJAG_00956":null,"SJAG_00963":null,"SJAG_00964":null,"SJAG_00980":null,"SJAG_00984":null,"SJAG_00986":null,"SJAG_00988":null,"SJAG_00993":null,"SJAG_00995":null,"SJAG_00996":null,"SJAG_00999":null,"SJAG_01000":null,"SJAG_01002":null,"SJAG_01010":null,"SJAG_01018":null,"SJAG_01024":null,"SJAG_01040":null,"SJAG_01047":null,"SJAG_01052":null,"SJAG_01070":null,"SJAG_01080":null,"SJAG_01081":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01129":null,"SJAG_01131":null,"SJAG_01148":null,"SJAG_01152":null,"SJAG_01159":null,"SJAG_01164":null,"SJAG_01176":null,"SJAG_01179":null,"SJAG_01181":null,"SJAG_01182":null,"SJAG_01186":null,"SJAG_01197":null,"SJAG_01198":null,"SJAG_01221":null,"SJAG_01235":null,"SJAG_01240":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01259":null,"SJAG_01268":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01315":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01352":null,"SJAG_01354":null,"SJAG_01373":null,"SJAG_01376":null,"SJAG_01383":null,"SJAG_01400":null,"SJAG_01402":null,"SJAG_01405":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01474":null,"SJAG_01489":null,"SJAG_01499":null,"SJAG_01500":null,"SJAG_01510":null,"SJAG_01522":null,"SJAG_01530":null,"SJAG_01544":null,"SJAG_01546":null,"SJAG_01571":null,"SJAG_01575":null,"SJAG_01577":null,"SJAG_01587":null,"SJAG_01595":null,"SJAG_01611":null,"SJAG_01613":null,"SJAG_01615":null,"SJAG_01616":null,"SJAG_01618":null,"SJAG_01620":null,"SJAG_01644":null,"SJAG_01653":null,"SJAG_01664":null,"SJAG_01669":null,"SJAG_01677":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01684":null,"SJAG_01704":null,"SJAG_01718":null,"SJAG_01724":null,"SJAG_01731":null,"SJAG_01762":null,"SJAG_01787":null,"SJAG_01791":null,"SJAG_01797":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_01807":null,"SJAG_01816":null,"SJAG_01825":null,"SJAG_01831":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01859":null,"SJAG_01863":null,"SJAG_01874":null,"SJAG_01877":null,"SJAG_01878":null,"SJAG_01885":null,"SJAG_01918":null,"SJAG_01937":null,"SJAG_01938":null,"SJAG_01942":null,"SJAG_01944":null,"SJAG_01945":null,"SJAG_01953":null,"SJAG_01964":null,"SJAG_02015":null,"SJAG_02022":null,"SJAG_02038":null,"SJAG_02058":null,"SJAG_02061":null,"SJAG_02074":null,"SJAG_02077":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_02104":null,"SJAG_02182":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02206":null,"SJAG_02226":null,"SJAG_02236":null,"SJAG_02242":null,"SJAG_02249":null,"SJAG_02267":null,"SJAG_02286":null,"SJAG_02287":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02348":null,"SJAG_02364":null,"SJAG_02370":null,"SJAG_02378":null,"SJAG_02382":null,"SJAG_02392":null,"SJAG_02394":null,"SJAG_02399":null,"SJAG_02400":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02426":null,"SJAG_02428":null,"SJAG_02429":null,"SJAG_02431":null,"SJAG_02457":null,"SJAG_02460":null,"SJAG_02468":null,"SJAG_02498":null,"SJAG_02517":null,"SJAG_02521":null,"SJAG_02527":null,"SJAG_02545":null,"SJAG_02558":null,"SJAG_02563":null,"SJAG_02564":null,"SJAG_02571":null,"SJAG_02575":null,"SJAG_02592":null,"SJAG_02596":null,"SJAG_02598":null,"SJAG_02602":null,"SJAG_02604":null,"SJAG_02610":null,"SJAG_02615":null,"SJAG_02618":null,"SJAG_02619":null,"SJAG_02643":null,"SJAG_02680":null,"SJAG_02686":null,"SJAG_02690":null,"SJAG_02698":null,"SJAG_02704":null,"SJAG_02708":null,"SJAG_02712":null,"SJAG_02713":null,"SJAG_02720":null,"SJAG_02721":null,"SJAG_02723":null,"SJAG_02725":null,"SJAG_02736":null,"SJAG_02738":null,"SJAG_02741":null,"SJAG_02748":null,"SJAG_02760":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02808":null,"SJAG_02822":null,"SJAG_02825":null,"SJAG_02835":null,"SJAG_02838":null,"SJAG_02858":null,"SJAG_02872":null,"SJAG_02875":null,"SJAG_02878":null,"SJAG_02879":null,"SJAG_02887":null,"SJAG_02889":null,"SJAG_02895":null,"SJAG_02897":null,"SJAG_02906":null,"SJAG_02923":null,"SJAG_02926":null,"SJAG_02950":null,"SJAG_02977":null,"SJAG_02991":null,"SJAG_02994":null,"SJAG_02997":null,"SJAG_03011":null,"SJAG_03017":null,"SJAG_03036":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03069":null,"SJAG_03071":null,"SJAG_03077":null,"SJAG_03096":null,"SJAG_03129":null,"SJAG_03140":null,"SJAG_03141":null,"SJAG_03145":null,"SJAG_03157":null,"SJAG_03160":null,"SJAG_03174":null,"SJAG_03193":null,"SJAG_03206":null,"SJAG_03209":null,"SJAG_03213":null,"SJAG_03224":null,"SJAG_03237":null,"SJAG_03257":null,"SJAG_03277":null,"SJAG_03313":null,"SJAG_03320":null,"SJAG_03336":null,"SJAG_03345":null,"SJAG_03349":null,"SJAG_03355":null,"SJAG_03362":null,"SJAG_03363":null,"SJAG_03376":null,"SJAG_03384":null,"SJAG_03386":null,"SJAG_03409":null,"SJAG_03421":null,"SJAG_03436":null,"SJAG_03438":null,"SJAG_03449":null,"SJAG_03451":null,"SJAG_03457":null,"SJAG_03471":null,"SJAG_03475":null,"SJAG_03479":null,"SJAG_03486":null,"SJAG_03495":null,"SJAG_03496":null,"SJAG_03497":null,"SJAG_03501":null,"SJAG_03526":null,"SJAG_03529":null,"SJAG_03533":null,"SJAG_03534":null,"SJAG_03545":null,"SJAG_03557":null,"SJAG_03567":null,"SJAG_03570":null,"SJAG_03585":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03613":null,"SJAG_03626":null,"SJAG_03658":null,"SJAG_03659":null,"SJAG_03660":null,"SJAG_03669":null,"SJAG_03676":null,"SJAG_03679":null,"SJAG_03689":null,"SJAG_03703":null,"SJAG_03708":null,"SJAG_03709":null,"SJAG_03720":null,"SJAG_03728":null,"SJAG_03730":null,"SJAG_03753":null,"SJAG_03780":null,"SJAG_03785":null,"SJAG_03789":null,"SJAG_03798":null,"SJAG_03799":null,"SJAG_03811":null,"SJAG_03813":null,"SJAG_03832":null,"SJAG_03846":null,"SJAG_03850":null,"SJAG_03854":null,"SJAG_03866":null,"SJAG_03886":null,"SJAG_03887":null,"SJAG_03892":null,"SJAG_03896":null,"SJAG_03897":null,"SJAG_03898":null,"SJAG_03909":null,"SJAG_03923":null,"SJAG_03927":null,"SJAG_03932":null,"SJAG_03946":null,"SJAG_03948":null,"SJAG_03950":null,"SJAG_03967":null,"SJAG_03982":null,"SJAG_03987":null,"SJAG_04001":null,"SJAG_04038":null,"SJAG_04052":null,"SJAG_04055":null,"SJAG_04064":null,"SJAG_04081":null,"SJAG_04094":null,"SJAG_04114":null,"SJAG_04118":null,"SJAG_04121":null,"SJAG_04125":null,"SJAG_04126":null,"SJAG_04147":null,"SJAG_04150":null,"SJAG_04154":null,"SJAG_04156":null,"SJAG_04167":null,"SJAG_04183":null,"SJAG_04187":null,"SJAG_04189":null,"SJAG_04203":null,"SJAG_04206":null,"SJAG_04210":null,"SJAG_04230":null,"SJAG_04232":null,"SJAG_04258":null,"SJAG_04268":null,"SJAG_04276":null,"SJAG_04277":null,"SJAG_04280":null,"SJAG_04282":null,"SJAG_04285":null,"SJAG_04287":null,"SJAG_04288":null,"SJAG_04312":null,"SJAG_04320":null,"SJAG_04334":null,"SJAG_04355":null,"SJAG_04372":null,"SJAG_04394":null,"SJAG_04409":null,"SJAG_04435":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04465":null,"SJAG_04468":null,"SJAG_04469":null,"SJAG_04473":null,"SJAG_04477":null,"SJAG_04480":null,"SJAG_04482":null,"SJAG_04486":null,"SJAG_04495":null,"SJAG_04507":null,"SJAG_04511":null,"SJAG_04537":null,"SJAG_04544":null,"SJAG_04549":null,"SJAG_04551":null,"SJAG_04552":null,"SJAG_04566":null,"SJAG_04573":null,"SJAG_04577":null,"SJAG_04589":null,"SJAG_04597":null,"SJAG_04599":null,"SJAG_04612":null,"SJAG_04622":null,"SJAG_04634":null,"SJAG_04650":null,"SJAG_04655":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04669":null,"SJAG_04692":null,"SJAG_04693":null,"SJAG_04700":null,"SJAG_04734":null,"SJAG_04738":null,"SJAG_04745":null,"SJAG_04747":null,"SJAG_04755":null,"SJAG_04757":null,"SJAG_04760":null,"SJAG_04761":null,"SJAG_04762":null,"SJAG_04772":null,"SJAG_04777":null,"SJAG_04840":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_04856":null,"SJAG_04857":null,"SJAG_04865":null,"SJAG_04874":null,"SJAG_04882":null,"SJAG_04946":null,"SJAG_04970":null,"SJAG_04974":null,"SJAG_04980":null,"SJAG_05010":null,"SJAG_05018":null,"SJAG_05019":null,"SJAG_05022":null,"SJAG_05024":null,"SJAG_05025":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05194":null,"SJAG_05209":null,"SJAG_05213":null,"SJAG_05231":null,"SJAG_05249":null,"SJAG_05276":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05304":null,"SJAG_05313":null,"SJAG_05340":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_06597":null,"SJAG_06642":null,"SJAG_16455":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenyl ribonucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0032559","terms_by_termid":{"GO:0005524":null,"GO:0016208":null,"GO:0030552":null,"GO:0043531":null}}


id: PBO:0059371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 4","termid":"PBO:0059371"}


id: PBO:0066374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 1","termid":"PBO:0066374"}


id: MONDO:0011557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"radiation sensitivity/chromosome instability syndrome, autosomal dominant","secondary_identifiers":["MESH:C565326","MEDGEN:343082","OMIM:605463","UMLS:C1854244"],"synonyms":[{"name":"radiation sensitivity/chromosome instability syndrome, autosomal dominant","type":"exact"}],"termid":"MONDO:0011557","xrefs":{"Monarch":{"xref_id":"0011557"}}}


id: MOD:00307
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an L-asparagine residue to form a carboxyl-terminal L-aspartimide.","definition_xrefs":["DeltaMass:18","PubMed:2378679","PubMed:9309583","Unimod:23#N","PubMed:7662664","PubMed:7988548","PubMed:12771378","RESID:AA0302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartimide","synonyms":[{"name":"(3S)-3-amino-2,5-pyrrolidinedione","type":"exact"},{"name":"2-amino-butanimide","type":"exact"},{"name":"ASI","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"L-2-aminosuccinimide","type":"exact"},{"name":"L-3-aminosuccinimide","type":"related"},{"name":"L-asparaginimide","type":"exact"},{"name":"L-aspartimide","type":"exact"},{"name":"Succinimide formation from asparagine","type":"exact"},{"name":"alpha-aminosuccinimide","type":"exact"}],"termid":"MOD:00307"}


id: PBO:0057946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-2","termid":"PBO:0057946"}


id: PBO:0051342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-23 (pseudogene)","termid":"PBO:0051342"}


id: MONDO:0015023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital myopathy caused by pathogenic mutations in MYPN that lead to a wide spectrum of phenotypes. Patients with mutations in this gene often experience muscle weakness, facial weakness, and sometimes cardiac and respiratory issues. Histological findings on skeletal muscle biopsy are variable with nemaline bodies and cap-like lesions.","definition_xrefs":["PMID:28017374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"MYPN-related myopathy","secondary_identifiers":["UMLS:C4479186","GARD:16222","OMIM:617336","MEDGEN:1384302","DOID:0110933"],"synonyms":[{"name":"MYPN nemaline myopathy","type":"exact"},{"name":"MYPN-related myopathy","type":"exact"},{"name":"NEM11","type":"exact"},{"name":"nemaline myopathy 11","type":"exact"},{"name":"nemaline myopathy 11, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in MYPN","type":"exact"},{"name":"nemaline myopathy type 11","type":"exact"}],"termid":"MONDO:0015023","xrefs":{"Monarch":{"xref_id":"0015023"}}}


id: PBO:0049091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 148","termid":"PBO:0049091"}


id: PBO:0060963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold","termid":"PBO:0060963"}


id: PBO:0087473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs","termid":"PBO:0087473"}


id: PBO:0075367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 pseudogene 1","termid":"PBO:0075367"}


id: PBO:0065763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGY upstream open reading frame","termid":"PBO:0065763"}


id: GO:0050089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannose = D-fructose.","definition_xrefs":["RHEA:22604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"mannose isomerase activity","secondary_identifiers":["MetaCyc:MANNOSE-ISOMERASE-RXN","EC:5.3.1.7","KEGG_REACTION:R00877"],"synonyms":[{"name":"D-mannose aldose-ketose-isomerase activity","type":"related"},{"name":"D-mannose isomerase activity","type":"related"},{"name":"D-mannose ketol-isomerase activity","type":"related"}],"termid":"GO:0050089"}


id: PBO:0062585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 9","termid":"PBO:0062585"}


id: GO:0080147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a root hair cell over time, from its formation to the mature state.","definition_xrefs":["PMID:19675148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"root hair cell differentiation","termid":"GO:0048765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell development","termid":"GO:0080147"}


id: MONDO:1010886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in pigs due to a mutation in the TPP1 gene created using gene editing.","definition_xrefs":["OMIA:001472-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, pig","termid":"MONDO:1011577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, TPP1-related, pig","synonyms":[{"name":"neuronal ceroid lipofuscinosis, 2, pig","type":"related"}],"termid":"MONDO:1010886","xrefs":{"Monarch":{"xref_id":"1010886"}}}


id: MOD:01467
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15939799","Unimod:302#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative - site K","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01467"}


id: PBO:0045697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3 pseudogene 1","termid":"PBO:0045697"}


id: MOD:00964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine epsilon amino to imine + 12 amu","synonyms":[{"name":"N6-(methylidene)-lysine","type":"exact"}],"termid":"MOD:00964"}


id: GO:0052175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host carbohydrate (obsolete GO:0052175)","termid":"GO:0052175"}


id: GO:0071061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:10811835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha6-beta4 integrin-CD151 complex","synonyms":[{"name":"ITGA6-ITGB4-CD151 complex","type":"narrow"}],"termid":"GO:0071061"}


id: PBO:0002984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease Isp5","termid":"PBO:0002984"}


id: PBO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0016115"}


id: GO:0072687
data:
  {"annotated_genes":["SJAG_04412","SJAG_01546","SJAG_05196","SJAG_02320","SJAG_03989","SJAG_04623","SJAG_03926","SJAG_03681","SJAG_02368","SJAG_04745","SJAG_00460","SJAG_03915","SJAG_02286","SJAG_00930","SJAG_02241","SJAG_01464","SJAG_04140","SJAG_01837","SJAG_03540","SJAG_03048","SJAG_01613","SJAG_01805","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91235,104294,105222,109792,113187,115232,117918,120700],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[89618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990574"},{"annotations":[120736,105486,118687,103370],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990385"},{"annotations":[101834,95682,95755,109067,98685,104757,93175,120882,101136,96673],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"A spindle that forms as part of meiosis. Several proteins, such as budding yeast Spo21p, fission yeast Spo2 and Spo13, and C. elegans mei-1, localize specifically to the meiotic spindle and are absent from the mitotic spindle.","definition_xrefs":["PMID:8027178","GOC:vw","GOC:mah","PMID:11408572","PMID:18367542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle","termid":"GO:0005819"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00930":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02241":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03681":null,"SJAG_03915":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072687","terms_by_termid":{"GO:0072687":null,"GO:0090619":null,"GO:1990385":null,"GO:1990574":null}}


id: CHEBI:15422
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP","termid":"CHEBI:15422"}


id: PATO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000249 righting reflex (obsolete PATO:0000249)","termid":"PATO:0000249"}


id: GO:0090071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribosome biogenesis","termid":"GO:0090069"},{"relation_name":"negatively_regulates","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"}


id: MONDO:0006817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade malignant bone-forming mesenchymal neoplasm arising from the surface of the bone. It usually affects the distal posterior femur, the proximal tibia, and proximal humerus. Painless swelling is the usual clinical sign. Most patients are young adults and the prognosis is usually excellent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral osteosarcoma","termid":"MONDO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"juxtacortical osteosarcoma","secondary_identifiers":["ONCOTREE:PAOS","ICDO:9192/3","DOID:3373","EFO:1001000","MEDGEN:60197","MESH:D018217","UMLS:C0206642","NCIT:C8969"],"synonyms":[{"name":"PAOS","type":"related"},{"name":"juxtacortical osteogenic sarcoma","type":"exact"},{"name":"juxtacortical osteosarcoma","type":"exact"},{"name":"parosteal osteogenic sarcoma","type":"exact"},{"name":"parosteal osteosarcoma","type":"exact"}],"termid":"MONDO:0006817","xrefs":{"Monarch":{"xref_id":"0006817"}}}


id: PBO:0070545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 11","termid":"PBO:0070545"}


id: MONDO:0032013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder with homogeneous therapeutic possibilities, regardless of the pathophysiological mechanism involved.","definition_xrefs":["Orphanet:377792"],"gene_count":0,"genotype_count":0,"name":"obsolete clinical syndrome (obsolete MONDO:0032013)","termid":"MONDO:0032013","xrefs":{"Monarch":{"xref_id":"0032013"}}}


id: FYPO:0004594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched, septated and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"branched, elongated, septated cell","synonyms":[{"name":"branched, elongated, septated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated, septated cell during vegetative growth","type":"exact"},{"name":"branched, elongated, septated vegetative cell","type":"exact"},{"name":"branched, long, septated cell","type":"exact"}],"termid":"FYPO:0004594"}


id: PBO:0113478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthase subunit of trehalose-6-P synthase/phosphatase complex; synthesizes the storage carbohydrate trehalose, which is critically important for survival of long-term desiccation; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway; protein abundance increases in response to DNA replication stress and in response to prolonged exposure to boric acid; required for pseudohyphal growth","termid":"PBO:0113478"}


id: GO:0021776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","PMID:15936325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in spinal cord motor neuron cell fate specification","synonyms":[{"name":"hedgehog signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"hh signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"smoothened signalling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"}],"termid":"GO:0021776"}


id: MONDO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macular coloboma-cleft palate-hallux valgus syndrome is characterized by the association of bilateral macular coloboma, cleft palate, and hallux valgus. It has been described in a brother and sister. Pelvic, limb and digital anomalies were also reported. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:91494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular coloboma-cleft palate-hallux valgus syndrome","secondary_identifiers":["UMLS:C1857619","GARD:16802","MEDGEN:341812","MESH:C565686","OMIM:216800","SCTID:722463001"],"synonyms":[{"name":"coloboma of macula and skeletal anomalies","type":"related"}],"termid":"MONDO:0009001","xrefs":{"Monarch":{"xref_id":"0009001"}}}


id: PBO:0052981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta like 1","termid":"PBO:0052981"}


id: GO:0009250
data:
  {"annotated_genes":["SJAG_03123","SJAG_04771","SJAG_04659","SJAG_02916","SJAG_04462","SJAG_03587","SJAG_01028","SJAG_01376","SJAG_00218","SJAG_03057","SJAG_04509","SJAG_01255","SJAG_04073","SJAG_03705","SJAG_00963","SJAG_00424","SJAG_04668","SJAG_04184","SJAG_02222","SJAG_01787","SJAG_04483","SJAG_04236","SJAG_00610","SJAG_05285","SJAG_04666","SJAG_02446","SJAG_02590","SJAG_01290","SJAG_01835","SJAG_02278","SJAG_00876","SJAG_01453","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64269,76952,78583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[75119,72388,75291,73177,80560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[72818,74766,115173,76285,93490,77638,108074,117841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104588,80008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[78876,80810],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[89378,94313],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89761],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[69405,120072,94297,92652,107309,119939,107883],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[96850,94319,104796,91318],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"glucan anabolism","type":"exact"},{"name":"glucan biosynthesis","type":"exact"},{"name":"glucan formation","type":"exact"},{"name":"glucan synthesis","type":"exact"}],"termid":"GO:0009250","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:1903320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein modification by small protein conjugation or removal.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"regulates","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"}


id: SO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An snRNA required for the splicing of the minor U12-dependent class of eukaryotic nuclear introns. It forms a base paired complex with U6atac_snRNA (SO:0000397).","definition_xrefs":["PMID:12409455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4atac_snRNA","synonyms":[{"name":"U4atac small nuclear RNA","type":"exact"},{"name":"U4atac snRNA","type":"exact"},{"name":"small nuclear RNA U4atac","type":"exact"},{"name":"snRNA U4atac","type":"exact"}],"termid":"SO:0000394"}


id: PBO:0084842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; conserved in metazoa, with similarity to human mitochondrial ribosomal protein MRPL49","termid":"PBO:0084842"}


id: MONDO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the fallopian tube. Representative examples include papilloma, adenofibroma, and leiomyoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube benign neoplasm","secondary_identifiers":["MedDRA:10053865","MEDGEN:83416","NCIT:C4517","Orphanet:180237","UMLS:C0346190","SCTID:92100009","DOID:0060111"],"synonyms":[{"name":"benign fallopian tube neoplasm","type":"exact"},{"name":"benign fallopian tube tumor","type":"exact"},{"name":"benign fallopian tube tumour","type":"exact"},{"name":"benign neoplasm of fallopian tube","type":"exact"},{"name":"benign neoplasm of the fallopian tube","type":"exact"},{"name":"benign tumor of fallopian tube","type":"exact"},{"name":"benign tumor of fallopian tubes","type":"exact"},{"name":"benign tumor of the fallopian tube","type":"exact"},{"name":"benign tumour of fallopian tube","type":"exact"},{"name":"benign tumour of fallopian tubes","type":"exact"},{"name":"benign tumour of the fallopian tube","type":"exact"},{"name":"fallopian tube benign neoplasm","type":"exact"},{"name":"fallopian tube neoplasm, benign","type":"exact"},{"name":"fallopian tube tumor, benign","type":"exact"}],"termid":"MONDO:0000645","xrefs":{"Monarch":{"xref_id":"0000645"}}}


id: GO:0046160
data:
  {"annotated_genes":["SJAG_04397","SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80180,81837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03173":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme a metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"haem a metabolic process","type":"exact"},{"name":"haem a metabolism","type":"exact"},{"name":"heme a metabolism","type":"exact"}],"termid":"GO:0046160","terms_by_termid":{"GO:0006784":null}}


id: GO:0070999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of gravity in which a sensory mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of gravity","termid":"GO:0009590"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of gravity","termid":"GO:0070998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of gravity","termid":"GO:0070999"}


id: PBO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Rad Wee1","termid":"PBO:0033821"}


id: GO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete freezing tolerance (obsolete GO:0009632)","synonyms":[{"name":"freezing tolerance","type":"exact"}],"termid":"GO:0009632"}


id: MONDO:0016939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 2p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 2. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 2p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 2","termid":"MONDO:0016922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 2","secondary_identifiers":["icd11.foundation:232544112","GARD:5337","MEDGEN:208635","MESH:C538318","Orphanet:262698","UMLS:C0795803"],"synonyms":[{"name":"2p duplication","type":"related"},{"name":"2p trisomy","type":"related"},{"name":"Duplication 2p","type":"related"},{"name":"chromosome 2p duplication","type":"related"},{"name":"partial duplication of chromosome 2p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 2","type":"exact"},{"name":"partial trisomy 2p","type":"related"},{"name":"partial trisomy of chromosome 2p","type":"exact"},{"name":"trisomy 2p","type":"related"}],"termid":"MONDO:0016939","xrefs":{"Monarch":{"xref_id":"0016939"}}}


id: PBO:0055530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2965","termid":"PBO:0055530"}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: GO:1905499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a trichome papilla.","definition_xrefs":["PMID:24014871","GOC:TermGenie","GOC:tb","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"part_of","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"trichome papilla formation","synonyms":[{"name":"trichome papilla assembly","type":"related"}],"termid":"GO:1905499"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: MONDO:1012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000519-9685"],"termid":"MONDO:1012110","xrefs":{"Monarch":{"xref_id":"1012110"}}}


id: MONDO:0007047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrokeratoelastoidosis of Costa is a rare dermatosis characterized by small, firm papules or plaques (resembling warts) on the sides of the hands and feet. These stationary and asymptomatic lesions appear generally at puberty, or sometimes later","definition_xrefs":["Orphanet:38"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","termid":"MONDO:0016436"},{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type III","secondary_identifiers":["GARD:125","MESH:C535653","MEDGEN:107467","DOID:0060362","EFO:1000758","OMIM:101850","UMLS:C0545044"],"synonyms":[{"name":"AKE","type":"exact"},{"name":"NTIA","type":"related"},{"name":"PPKP3","type":"exact"},{"name":"TIA","type":"related"},{"name":"acrokeratoelastoidosis","type":"related"},{"name":"acrokeratoelastoidosis of Costa","type":"exact"},{"name":"aganglionosis, total colonic","type":"related"},{"name":"ake","type":"exact"},{"name":"collagenous plaques of hand and feet","type":"related"},{"name":"collagenous plaques of hands and feet","type":"related"},{"name":"keratoderma, palmoplantar, punctate type 3","type":"exact"},{"name":"near-total intestinal aganglionosis","type":"related"},{"name":"palmoplantar keratoderma, punctate type 3","type":"related"},{"name":"palmoplantar keratoderma, punctate type III","type":"related"},{"name":"punctate palmoplantar hyperkeratosis type 3","type":"exact"},{"name":"punctate palmoplantar keratoderma type 3","type":"exact"},{"name":"rare form of Hirschsprung's disease","type":"related"}],"termid":"MONDO:0007047","xrefs":{"Monarch":{"xref_id":"0007047"}}}


id: GO:0017028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between proteins. Proteins are large molecules composed of one or more chains of amino acids. The amino acids are joined in a specific order by peptide bonds.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete protein stabilization activity (obsolete GO:0017028)","synonyms":[{"name":"protein stabilization activity","type":"exact"}],"termid":"GO:0017028"}


id: PBO:0046898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member E, pseudogene","termid":"PBO:0046898"}


id: PBO:0067225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 294, pseudogene","termid":"PBO:0067225"}


id: GO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell-substrate adherens junction found in the apical region of a cell, such as those found in cuticle-secreting epithelia, which connect the apical membrane to the cuticle.","definition_xrefs":["PMID:11700298","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apical hemi-adherens junction (obsolete GO:0005928)","synonyms":[{"name":"apical cell-substrate adherens junction","type":"exact"},{"name":"apical dense plaque","type":"exact"}],"termid":"GO:0005928"}


id: PBO:0070464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 7","termid":"PBO:0070464"}


id: PBO:0074283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 3","termid":"PBO:0074283"}


id: FYPO:0003225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of microtubule polymerization, i.e. the addition of tubulin dimers to a microtubule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:23051734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"},{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"normal microtubule polymerization rate","type":"exact"},{"name":"normal rate of microtubule growth","type":"related"},{"name":"normal rate of microtubule polymerisation","type":"exact"},{"name":"normal rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"normal rate of microtubule polymerization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003225"}


